RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPTX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000171246

Ensembl transcript IDs: ENST00000306773.5, ENST00000535681.1, ENST00000571100.1, ENST00000575212.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTaGAAAGCAGGAAGCTCCTCCTACCCTGGGCAGGGCCTCCCGAGC +
Preference number: 1 (lower is better)
Translates to: GDRVGVPSGRATTRW*KAGSSSYPGQGLPS
Trigger: GCTCGGGAGGCCCTGCCCAGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CGGCTTCCCGGGCTGTGGGTGGCACGCTCCTCTCTCAGGGCCCTCTaGGCTGAAGCAGTGCAGCACAGCTCCAGAGGTGAGAAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: RLPGLWVARSSLRAL*AEAVQHSSRGEKGG
Trigger: CCCTCCCTTCTCACCTCTGGAGCTGTGCTGCACTGCTTCAGCCCAGAGGGCCCTGAGAGAGGAGCGTGCCACCCACAGCCCGGGAAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CCCTGGCCAGGCCTGGCTCCACACGTGAGGTCTCTGGAGTACCCCTaGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCTGGGAG +
Preference number: 1 (lower is better)
Translates to: PWPGLAPHVRSLEYP*RGLNQLTWRLVCWE
Trigger: CTCCCAGCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGACCTCACGTGTGGAGCCAGGCCTGGCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATaGTGCAAAGCAGGAAGCTCCTCCTACCCTGGGCAGGGCCTCCCG +
Preference number: 1 (lower is better)
Translates to: PGDRVGVPSGRATTR*CKAGSSSYPGQGLP
Trigger: CGGGAGGCCCTGCCCAGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp GGGCAGGAGGGAGCTAAAGGTCAGCTTCGGCCCTGGCACCATGGGTaGGTCAGAGGAGGGGTGAGGAAGGTGAGCGGGCCAGGAGGCTGC +
Preference number: 1 (lower is better)
Translates to: GQEGAKGQLRPWHHG*VRGGVRKVSGPGGC
Trigger: GCAGCCTCCTGGCCCGCTCACCTTCCTCACCCCTCCTCTGACCCACCCATGGTGCCAGGGCCGAAGCTGACCTTTAGCTCCCTCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR TCA 90 bp GTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCATGGTCCTaGACGGACAGCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: VLCPSLVRAEDGSWS*TDSSHLAHGGRRWS
Trigger: AGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp TCAGGGCAGAGGATGGCTCATGGTCCTGAACGGACAGCTCCCACCTaGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCA +
Preference number: 1 (lower is better)
Translates to: SGQRMAHGPERTAPT*PTGAEGGLRSSRSA
Trigger: TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATCCTCTGCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp ACACTGGGCGGCACTCGGCACACAACACAGAACCGGGGCAGTCCATaGAGGTGCGGGAACACATGTCGGACCCAGGGAGCAAGGAACACG +
Preference number: 1 (lower is better)
Translates to: TLGGTRHTTQNRGSP*RCGNTCRTQGARNT
Trigger: CGTGTTCCTTGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATGGACTGCCCCGGTTCTGTGTTGTGTGCCGAGTGCCGCCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CTGGACACTGCTCAGGTGTCAGTGTCGCCGGCCAGTGGCAGCTTGTaGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTT +
Preference number: 1 (lower is better)
Translates to: LDTAQVSVSPASGSL*AAVGREPHEMEEWV
Trigger: AACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCACAAGCTGCCACTGGCCGGCGACACTGACACCTGAGCAGTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CACAGCCCGCACCGGGCGTTGCCTACACAAGGGCTCCGAGATGGCTaGAGTGAGGGTGGGGCTAGATCTGGTCTAGAGAGGCGACTCCAA +
Preference number: 1 (lower is better)
Translates to: HSPHRALPTQGLRDG*SEGGARSGLERRLQ
Trigger: TTGGAGTCGCCTCTCTAGACCAGATCTAGCCCCACCCTCACTCCAGCCATCTCGGAGCCCTTGTGTAGGCAACGCCCGGTGCGGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp TGTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTaGGGCTTCCTCAGGGACAGATGGGAGCAGGGGCTGCTTCGTGTG +
Preference number: 1 (lower is better)
Translates to: CEWGMPERVRAPTEK*GFLRDRWEQGLLRV
Trigger: CACACGAAGCAGCCCCTGCTCCCATCTGTCCCTGAGGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp GGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCTGGGAGGGATATaGCTGTCAAAGTCCCCCAAAAAGGACCTTCCCACCGATGGGCTG +
Preference number: 1 (lower is better)
Translates to: GSEPAHLAPGVLGGI*LSKSPKKDLPTDGL
Trigger: CAGCCCATCGGTGGGAAGGTCCTTTTTGGGGGACTTTGACAGCCATATCCCTCCCAGCACACCAGGCGCCAGGTGAGCTGGTTCAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp CTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTaGCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: LVSGLLMRLLETESG*PQGVRPPDGAKQEA
Trigger: AGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp CAAGGAACACGCCACCCCGAGGAACATGCAAACGGAGAAGATCCCTaGAGATCCAAGGATGCCACAACCCGACGGGCGCTGAGGAAGCAC +
Preference number: 1 (lower is better)
Translates to: QGTRHPEEHANGEDP*RSKDATTRRALRKH
Trigger: GTGCTTCCTCAGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGGCGTGTTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp GCAAAGCAGGAAGCTCCTCCTACCCTGGGCAGGGCCTCCCGAGCCTaGTCTCTTTCTCACTTAGCGCACACACACACACAACACACACAC +
Preference number: 1 (lower is better)
Translates to: AKQEAPPTLGRASRA*SLSHLAHTHTQHTH
Trigger: GTGTGTGTGTTGTGTGTGTGTGTGCGCTAAGTGAGAAAGAGAGCAGGCTCGGGAGGCCCTGCCCAGGGTAGGAGGAGCTTCCTGCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp ACATGTCGGACCCAGGGAGCAAGGAACACGCCACCCCGAGGAACATaGAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCG +
Preference number: 1 (lower is better)
Translates to: TCRTQGARNTPPRGT*KRRRSLQIQGCHNP
Trigger: CGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGGCGTGTTCCTTGCTCCCTGGGTCCGACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTGAATaGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGC +
Preference number: 1 (lower is better)
Translates to: LLPCSRRCSTHFSCE*GMPERVRAPTEKWG
Trigger: GCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 90 bp CTTACCCAGCCATTTTCAGTAGCTACACGGGTGGTCACAGAACACTaGGCGGCACTCGGCACACAACACAGAACCGGGGCAGTCCATGCA +
Preference number: 1 (lower is better)
Translates to: LTQPFSVATRVVTEH*AALGTQHRTGAVHA
Trigger: TGCATGGACTGCCCCGGTTCTGTGTTGTGTGCCGAGTGCCGCCCAGTGTTCTGTGACCACCCGTGTAGCTACTGAAAATGGCTGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp CTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTGAATGGGGCATaGCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCTCA +
Preference number: 1 (lower is better)
Translates to: LVQDVAAPTSAVNGA*LRESGLLQRSGASS
Trigger: TGAGGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR TCA 90 bp GGGGAGAGGGAAACTGAGCTCTCTCTTGACCTCCTCCAACACCCTTaGCTTGCTTACCCAGCCATTTTCAGTAGCTACACGGGTGGTCAC +
Preference number: 1 (lower is better)
Translates to: GERETELSLDLLQHP*LAYPAIFSSYTGGH
Trigger: GTGACCACCCGTGTAGCTACTGAAAATGGCTGGGTAAGCAAGTCAAGGGTGTTGGAGGAGGTCAAGAGAGAGCTCAGTTTCCCTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp CGCACACACAGATCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTaGAGCACCCACTTCAGCTGTGAATGGGGCATGCCTGAGAGAGTC +
Preference number: 1 (lower is better)
Translates to: RTHRSSHQLLPCSRR*STHFSCEWGMPERV
Trigger: GACTCTCTCAGGCATGCCCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGATCTGTGTGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp CCCCGAGGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATaGCACAACCCGACGGGCGCTGAGGAAGCACGATTATCTAAGAAA +
Preference number: 1 (lower is better)
Translates to: PRGTCKRRRSLQIQG*HNPTGAEEARLSKK
Trigger: TTTCTTAGATAATCGTGCTTCCTCAGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp ACACACACATGTAGACACGCACACACAGATCCTCTCACCAACTTCTaGCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTGAATGGG +
Preference number: 1 (lower is better)
Translates to: THTCRHAHTDPLTNF*LVQDVAAPTSAVNG
Trigger: CCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGATCTGTGTGTGCGTGTCTACATGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 90 bp ACCCACGAGAACACTGACACAGAGACACTGACAGACACACACAGATaGACTAGGTTCTTGACACAACGTGGACCTGTGTTTAAGGGGACA +
Preference number: 1 (lower is better)
Translates to: THENTDTETLTDTHR*TRFLTQRGPVFKGT
Trigger: TGTCCCCTTAAACACAGGTCCACGTTGTGTCAAGAACCTAGTGCATCTGTGTGTGTCTGTCAGTGTCTCTGTGTCAGTGTTCTCGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGGTGTGCGTGTGCGTGTaGAGGGGCGACGGCCTCGGT +
Preference number: 2 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVVCVCV*RGDGLG
Trigger: ACCGAGGCCGTCGCCCCTGCACACGCACACGCACAC...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAAGTGTCGCCGGCCAGTaGCAGCTTGTGGGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: APTWPTGAEGGLRSSRSASVAGQ*QLVGCC
Trigger: ACAGCAGCCCACAAGCTGCCACTGGCCGGCGACACT...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CATGCAGGTGCGGGAACACATGTCGGACCCAGGGAGCAAGGAACACGCCACCCCTTCCCGGGCTGTGGGTaGCACGCTCCTCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: HAGAGTHVGPREQGTRHPFPGCG*HAPLSG
Trigger: CCCTGAGAGAGGAGCGTGCCACCCACAGCCCGGGAA...GGGGTGGCGTGTTCCTTGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCACAGGGCCCTCTGGGCTaGAGCAGTGCAGCACAGCTC +
Preference number: 2 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSQGPLG*SSAAQL
Trigger: GAGCTGTGCTGCACTGCTTCAGCCCAGAGGGCCCTG...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GGATCTAAGCCCCTGAGGGCCCGGAGAGCTTCTGTCAACAGCTCTCCCACCCCGCCCTCTGGTCTGCACTaGCGGAGGCCAAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GSKPLRARRASVNSSPTPPSGLH*RRPKER
Trigger: CCTCTCCTTTGGCCTCCGGCAGTGCAGACCAGAGGG...CGGGGTGGGAGAGCTGTTGACAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCAGGTCCCCTCTGGTCTaGACTGCCGGAGGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPRSPLV*TAGGQR
Trigger: CCTTTGGCCTCCGGCAGTGCAGACCAGAGGGGACCT...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAAACCGGGGCAGTCCATaGAGGTGCGGGAACACATGT +
Preference number: 2 (lower is better)
Translates to: APTWPTGAEGGLRSSRSANRGSP*RCGNTC
Trigger: ACATGTGTTCCCGCACCTGCATGGACTGCCCCGGTT...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp TCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAGGGATGGATGCTGTCTaGCCCTGGGGTAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: SWRQSRGALRACDHQMVQGMDAV*PWGKGQ
Trigger: CTGGCCCTTACCCCAGGGCCAGACAGCATCCATCCC...TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCATTAAAAGGTCCCCTCTaGTCTGCACTGCCGGAGGCC +
Preference number: 2 (lower is better)
Translates to: APTWPTGAEGGLRSSRSALKGPL*SALPEA
Trigger: GGCCTCCGGCAGTGCAGACCAGAGGGGACCTTTTAA...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp GGATCTAAGCCCCTGAGGGCCCGGAGAGCTTCTGTCAACAGCTCTCCCACCCCGCTGAACCAGCTCACCTaGCGCCTGGTGTGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GSKPLRARRASVNSSPTPLNQLT*RLVCWE
Trigger: CTCCCAGCACACCAGGCGCCAGGTGAGCTGGTTCAG...CGGGGTGGGAGAGCTGTTGACAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CATGCAGGTGCGGGAACACATGTCGGACCCAGGGAGCAAGGAACACGCCACCCCGCCAGTGGCAGCTTGTaGGCTGCTGTAGGCCGTGAG +
Preference number: 2 (lower is better)
Translates to: HAGAGTHVGPREQGTRHPASGSL*AAVGRE
Trigger: CTCACGGCCTACAGCAGCCCACAAGCTGCCACTGGC...GGGGTGGCGTGTTCCTTGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp GTTCTGGACACTGCTCAGGTGTCAGTGTCGCCGGCCAGTGGCAGCTaGTGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: VLDTAQVSVSPASGS*WAAVGREPHEMEEW
Trigger: CCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCACAAGCTGCCACTGGCCGGCGACACTGACACCTGAGCAGTGTCCAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCATCCCAGGCCCCATGCTaGTCTCAGATGCAAACAGCA +
Preference number: 2 (lower is better)
Translates to: APTWPTGAEGGLRSSRSASQAPC*SQMQTA
Trigger: TGCTGTTTGCATCTGAGAGCAGCATGGGGCCTGGGA...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTGCGGGAGTGATGCATTaGAGAACGGCGGCCGGGTAC +
Preference number: 2 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAAGVMH*RTAAGY
Trigger: GTACCCGGCCGCCGTTCTGCAATGCATCACTCCCGC...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCCCCAGTGGCCCCATGTaGCCAGGTCTTCATCGAAAC +
Preference number: 2 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPPSGPM*PGLHRN
Trigger: GTTTCGATGAAGACCTGGCCACATGGGGCCACTGGG...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTAGATGGGAGCAGGGGCTaGTTCGTGTGCATGAGGACA +
Preference number: 2 (lower is better)
Translates to: GALRACDHQMVQSRKLLLDGSRG*FVCMRT
Trigger: TGTCCTCATGCACACGAAGCAGCCCCTGCTCCCATC...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCACCTCCCAGGCCCCATaGTGCTCTCAGATGCAAACA +
Preference number: 2 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPTSQAP*CSQMQT
Trigger: TGTTTGCATCTGAGAGCAGCATGGGGCCTGGGAGGT...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCAAGGGCCTCCCGAGCCTaGTCTCTTTCTCACTTAGCG +
Preference number: 2 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSRASRA*SLSHLA
Trigger: CGCTAAGTGAGAAAGAGAGCAGGCTCGGGAGGCCCT...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTATGCAAACAGCAGGGATaGATGCTGTCTGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: GALRACDHQMVQSRKLLLCKQQG*MLSGPG
Trigger: CCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCA...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTCCCGCCCCCGGCCTTTaGCAAACCACTAAAAGACAT +
Preference number: 2 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPPAPGL*QTTKRH
Trigger: ATGTCTTTTAGTGGTTTGTCAAAGGCCGGGGGCGGG...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCACCACCCCGAGGAACATaGAAACGGAGAAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSPPRGT*KRRRSL
Trigger: CAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGG...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCACCAACACCCTTGACTTaGTTACCCAGCCATTTTCAG +
Preference number: 2 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAPTPLT*LPSHFQ
Trigger: CTGAAAATGGCTGGGTAAGCAAGTCAAGGGTGTTGG...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCACTTCAGCTGTGAATaGGGCATGCCTGAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVHFSCE*GMPERV
Trigger: GACTCTCTCAGGCATGCCCCATTCACAGCTGAAGTG...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAAAGGCAAAAAGGTTCTaGACACTGCTCAGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAKAKRF*TLLRCQ
Trigger: CTGACACCTGAGCAGTGTCCAGAACCTTTTTGCCTT...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp GCTCTCAGATGCAAACAGCAGGGATGGATGCTGTCTGGCCCTGGGGTAAGGGCCGCTGCTTCGTGTGCATaGGGACAAAACCAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ALRCKQQGWMLSGPGVRAAASCA*GQNQAV
Trigger: CACAGCCTGGTTTTGTCCTCATGCACACGAAGCAGC...GGCCCTTACCCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCATCTGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAACCTTGTTCAAGACGTTaGAGCACCCACTTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: SWRQSRGALRACDHQMVQPCSRR*STHFSC
Trigger: ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGG...TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTAACGGAGAAGATCCCTaGAGATCCAAGGATGCCACA +
Preference number: 2 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPANGEDP*RSKDAT
Trigger: TGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTT...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp GAGGGTGGGGCTAGATCTGGTCTAGAGAGGCGACTCCAAGCTCTCTaGCTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACC +
Preference number: 2 (lower is better)
Translates to: EGGARSGLERRLQAL*LAPSCGNPLGLFST
Trigger: GGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAGCAAGAGAGCTTGGAGTCGCCTCTCTAGACCAGATCTAGCCCCACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATCAGGCTGTGTGCGTGTaGGTGTGCAGGGGCGACGGC +
Preference number: 2 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNQAVCV*VCRGDG
Trigger: GCCGTCGCCCCTGCACACGCACACGCACACAGCCTG...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGAGGGGCTGCTTCGTGTaGATGAGGACAAAACCAGGC +
Preference number: 2 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVERGCFV*MRTKPG
Trigger: GCCTGGTTTTGTCCTCATGCACACGAAGCAGCCCCT...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTCCTCTCACCAACTTCTaGCTTGTTCAAGACGTTGCA +
Preference number: 2 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAPLTNF*LVQDVA
Trigger: TGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGG...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGGCGACCACCAGATGGTaGAAAGCAGGAAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTATTRW*KAGSSS
Trigger: GGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGC...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTGCTCCTACAGAGAAGTaGGGCTTCCTCAGGGACAGA +
Preference number: 2 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLAPTEK*GFLRDR
Trigger: TCTGTCCCTGAGGAAGCCCCACTTCTCTGTAGGAGC...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAACGGCTTCCCGGGCTGTaGGTGGCACGCTCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKRLPGL*VARSSL
Trigger: GAGAGAGGAGCGTGCCACCCACAGCCCGGGAAGCCG...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGGACAAATGCGTGTACTaGGGTTGCACCAACCCCAAA +
Preference number: 2 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEDKCVY*GCTNPK
Trigger: TTTGGGGTTGGTGCAACCTCAGTACACGCATTTGTC...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAATTCCCACCGATGGGCTaGGTTGAAGTCCCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKFPPMG*VEVPVA
Trigger: GGCCACTGGGACTTCAACCCAGCCCATCGGTGGGAA...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAATGGCGCCTGGTGTGCTaGGAGGGATATGGCTGTCAA +
Preference number: 2 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKWRLVC*EGYGCQ
Trigger: TTGACAGCCATATCCCTCCCAGCACACCAGGCGCCA...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAGTGAGCCCCATGAGATaGAGGAGTGGGTTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKVSPMR*RSGFQA
Trigger: GGCCTGAAACCCACTCCTCCATCTCATGGGGCTCAC...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGCTGGCCGGAGGTGCTaGCAGGGGAGCACCCCACAC +
Preference number: 2 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPAGRRC*QGSTPH
Trigger: GTGTGGGGTGCTCCCCTGCCAGCACCTCCGGCCAGC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp AGAGGGAAACTGAGCTCTCTCTTGACCTCCTCCAACACCCTTGACTaGCTTACCCAGCCATTTTCAGTAGCTACACGGGTGGTCACAGAA +
Preference number: 2 (lower is better)
Translates to: RGKLSSLLTSSNTLD*LTQPFSVATRVVTE
Trigger: TTCTGTGACCACCCGTGTAGCTACTGAAAATGGCTGGGTAAGCAAGTCAAGGGTGTTGGAGGAGGTCAAGAGAGAGCTCAGTTTCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTGAAGAAAGAAGGAAATaGGGTACGTCCTCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLEERRK*GTSSKK
Trigger: TTTCTTTGAGGACGTACCTCATTTCCTTCTTTCTTC...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp CTCCAAGCTCTCTTGCTGGCTCCCAGCTGTGGGAATCCTTTAGGCTaGTTCTCAACCTACACGTTAAAAATGCTTCTTGGTGTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: LQALLLAPSCGNPLG*FSTYTLKMLLGVFG
Trigger: CCCAAACACACCAAGAAGCATTTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAGCAAGAGAGCTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAACCGATGGGCTGGGTTaGAGTCCCAGTGGCCCCATG +
Preference number: 2 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPTDGLG*SPSGPM
Trigger: CATGGGGCCACTGGGACTTCAACCCAGCCCATCGGT...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGCCTGGCTCCACACGTaGGGTCTCTGGAGTACCCCT +
Preference number: 2 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPAWLHT*GLWSTP
Trigger: AGGGGTACTCCAGAGACCTCACGTGTGGAGCCAGGC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR TCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAAGAAAAAGCCACTGTTaGACAACAACGCGCAGCACG +
Preference number: 2 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKRKSHC*TTTRST
Trigger: CGTGCTGCGCGTTGTTGTTCAACAGTGGCTTTTTCT...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCGCTGTGAATGGGGCATaGCTGAGAGAGTCCGGGCTC +
Preference number: 2 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGAVNGA*LRESGL
Trigger: GAGCCCGGACTCTCTCAGGCATGCCCCATTCACAGC...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCTCCTCACCCCCTCACTaGCCACAAGACACCCCCTTG +
Preference number: 2 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGSSPPH*PQDTPL
Trigger: CAAGGGGGTGTCTTGTGGGCAGTGAGGGGGTGAGGA...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCGATGCTGTCTGGCCCTaGGGTAAGGGCCAGTGTCCT +
Preference number: 2 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGDAVWP*GKGQCP
Trigger: AGGACACTGGCCCTTACCCCAGGGCCAGACAGCATC...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp GCTCTGAGAAAGGTTTGCAAACAAAGACAAATGCGTGTACTGAGGTaGCACCAACCCCAAAGCACGCACGCAGCTAACAAAGTTGGCAAA +
Preference number: 2 (lower is better)
Translates to: ALRKVCKQRQMRVLR*HQPQSTHAANKVGK
Trigger: TTTGCCAACTTTGTTAGCTGCGTGCGTGCTTTGGGGTTGGTGCAACCTCAGTACACGCATTTGTCTTTGTTTGCAAACCTTTCTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCTCTCTGGAGTACCCCTaGAGGGGTCTGAACCAGCTC +
Preference number: 2 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGSLEYP*RGLNQL
Trigger: GAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp ACATCAATCAGATTAAGGAGTAAATGGGAACTACGTGGATTAGATTaGCGGCTGTGTCATCGACCTTTCTCGGGGCCAGCAAAGTGCCAA +
Preference number: 2 (lower is better)
Translates to: TSIRLRSKWELRGLD*RLCHRPFSGPAKCQ
Trigger: TTGGCACTTTGCTGGCCCCGAGAAAGGTCGATGACACAGCCGCAAATCTAATCCACGTAGTTCCCATTTACTCCTTAATCTGATTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCACGTGCGACCACCAGATaGTGCAAAGCAGGAAGCTCC +
Preference number: 2 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPRATTR*CKAGSS
Trigger: GGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACG...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGCCTCGGTTCATTCCTaGGGAAAAGGGAGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPASVHS*GKGREE
Trigger: CTCTTCTCTCCCTTTTCCCCAGGAATGAACCGAGGC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 90 bp GACATTTATTACATCAATATAAAGATATGTCGCTCTGAGAAAGGTTaGCAAACAAAGACAAATGCGTGTACTGAGGTTGCACCAACCCCA +
Preference number: 2 (lower is better)
Translates to: DIYYINIKICRSEKG*QTKTNACTEVAPTP
Trigger: TGGGGTTGGTGCAACCTCAGTACACGCATTTGTCTTTGTTTGCAAACCTTTCTCAGAGCGACATATCTTTATATTGATGTAATAAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR GCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAAGGAAATGTCCATGTTaGTTTTCACGGGGAACAAAA +
Preference number: 2 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPRKCPC*FSRGTK
Trigger: TTTTGTTCCCCGTGAAAAGCAACATGGACATTTCCT...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp CGGGCCAGGAGGCTGCAGGGGTGGAGGCGTAAGCACTaGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: RARRLQGWRRKH*GVLCPSLVRAE
Trigger: CTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACGCCTCCACCCCTGCAGCCTCCTGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAGGGCAGACCCCAGCCTaGCAGGATCTGAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAGQTPA*QDLRRW
Trigger: CCACCTCCTCAGATCCTGCAAGGCTGGGGTCTGCCC...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp GTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTaGAAAGCAGGAAGCTCCTCCTACCCTGGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: VGVPSGRATTRW*KAGSSSYPGQG
Trigger: GCCCTGCCCAGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp CTGCAGGGGTGGAGGCGTAAGCACTGGGGTGTGCTCTaGCCCTCGCTAGTCAGGGCAGAGGATGGCTCATGG +
Preference number: 3 (lower is better)
Translates to: LQGWRRKHWGVL*PSLVRAEDGSW
Trigger: CCATGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACGCCTCCACCCCTGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp GCTCAGGTGTCAGTGTCGCCGGCCAGTGGCAGCTTGTaGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAG +
Preference number: 3 (lower is better)
Translates to: AQVSVSPASGSL*AAVGREPHEME
Trigger: CTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCACAAGCTGCCACTGGCCGGCGACACTGACACCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp AGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATaGTGCAAAGCAGGAAGCTCCTCCTACCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: RVGVPSGRATTR*CKAGSSSYPGQ
Trigger: CTGCCCAGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp AGGATGGCTCATGGTCCTGAACGGACAGCTCCCACCTaGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGT +
Preference number: 3 (lower is better)
Translates to: RMAHGPERTAPT*PTGAEGGLRSS
Trigger: ACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp GGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATaGCTCATGGTCCTGAACGGACAGCTCCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: GCALPLASQGRG*LMVLNGQLPPG
Trigger: GCCAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp GGAGCTAAAGGTCAGCTTCGGCCCTGGCACCATGGGTaGGTCAGAGGAGGGGTGAGGAAGGTGAGCGGGCCA +
Preference number: 3 (lower is better)
Translates to: GAKGQLRPWHHG*VRGGVRKVSGP
Trigger: TGGCCCGCTCACCTTCCTCACCCCTCCTCTGACCCACCCATGGTGCCAGGGCCGAAGCTGACCTTTAGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp GACTCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTaGGACCACCAGATGGTGCAAAGCAGGAAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: DSWRQSRGALRA*DHQMVQSRKLL
Trigger: GAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp GGCACTCGGCACACAACACAGAACCGGGGCAGTCCATaGAGGTGCGGGAACACATGTCGGACCCAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: GTRHTTQNRGSP*RCGNTCRTQGA
Trigger: TGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATGGACTGCCCCGGTTCTGTGTTGTGTGCCGAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp GGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTaGGGCTTCCTCAGGGACAGATGGGAGCAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: GMPERVRAPTEK*GFLRDRWEQGL
Trigger: CAGCCCCTGCTCCCATCTGTCCCTGAGGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp AAGGGGCAGGAGGGAGCTAAAGGTCAGCTTCGGCCCTaGCACCATGGGTGGGTCAGAGGAGGGGTGAGGAAG +
Preference number: 3 (lower is better)
Translates to: KGQEGAKGQLRP*HHGWVRGGVRK
Trigger: CTTCCTCACCCCTCCTCTGACCCACCCATGGTGCCAGGGCCGAAGCTGACCTTTAGCTCCCTCCTGCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAATGCGTGTACTGAGGTaGCACCAACCCCAAAGCACG +
Preference number: 3 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAMRVLR*HQPQST
Trigger: CGTGCTTTGGGGTTGGTGCAACCTCAGTACACGCAT...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTCACCGATGGGCTGGGTaGAAGTCCCAGTGGCCCCAT +
Preference number: 3 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAHRWAG*KSQWPH
Trigger: ATGGGGCCACTGGGACTTCAACCCAGCCCATCGGTG...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp CGCCACCCCGAGGAACATGCAAACGGAGAAGATCCCTaGAGATCCAAGGATGCCACAACCCGACGGGCGCTG +
Preference number: 3 (lower is better)
Translates to: RHPEEHANGEDP*RSKDATTRRAL
Trigger: CAGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp CACCGGGCGTTGCCTACACAAGGGCTCCGAGATGGCTaGAGTGAGGGTGGGGCTAGATCTGGTCTAGAGAGG +
Preference number: 3 (lower is better)
Translates to: HRALPTQGLRDG*SEGGARSGLER
Trigger: CCTCTCTAGACCAGATCTAGCCCCACCCTCACTCCAGCCATCTCGGAGCCCTTGTGTAGGCAACGCCCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR TCA 72 bp CAGGGACAGATGGGAGCAGGGGCTGCTTCGTGTGCATaGGGACAAAACCAGGCTGTGTGCGTGTGCGTGTGC +
Preference number: 3 (lower is better)
Translates to: QGQMGAGAASCA*GQNQAVCVCVC
Trigger: GCACACGCACACGCACACAGCCTGGTTTTGTCCTCATGCACACGAAGCAGCCCCTGCTCCCATCTGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp GGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTaGCCTCAGGGCGTGCGACCACCAGATGGTGCAAAG +
Preference number: 3 (lower is better)
Translates to: GLLMRLLETESG*PQGVRPPDGAK
Trigger: CTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp CCAGCTCACCTGGCGCCTGGTGTGCTGGGAGGGATATaGCTGTCAAAGTCCCCCAAAAAGGACCTTCCCACC +
Preference number: 3 (lower is better)
Translates to: PAHLAPGVLGGI*LSKSPKKDLPT
Trigger: GGTGGGAAGGTCCTTTTTGGGGGACTTTGACAGCCATATCCCTCCCAGCACACCAGGCGCCAGGTGAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGTGCGGGAGTGATGCATaGCAGAACGGCGGCCGGGTA +
Preference number: 3 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTCGSDA*QNGGRV
Trigger: TACCCGGCCGCCGTTCTGCAATGCATCACTCCCGCA...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp ACCCAGGGAGCAAGGAACACGCCACCCCGAGGAACATaGAAACGGAGAAGATCCCTGCAGATCCAAGGATGC +
Preference number: 3 (lower is better)
Translates to: TQGARNTPPRGT*KRRRSLQIQGC
Trigger: GCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGGCGTGTTCCTTGCTCCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp CCATTTTCAGTAGCTACACGGGTGGTCACAGAACACTaGGCGGCACTCGGCACACAACACAGAACCGGGGCA +
Preference number: 3 (lower is better)
Translates to: PFSVATRVVTEH*AALGTQHRTGA
Trigger: TGCCCCGGTTCTGTGTTGTGTGCCGAGTGCCGCCCAGTGTTCTGTGACCACCCGTGTAGCTACTGAAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTGCCTTGTTCAAGACGTaGCAGCACCCACTTCAGCTG +
Preference number: 3 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLALFKT*QHPLQL
Trigger: CAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGC...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR TCA 72 bp CAAGAAGGCTTACGACTCAAGTGGGATCTAAGCCCCTaGGGGCCCGGAGAGCTTCTGTCAACAGCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: QEGLRLKWDLSP*GPGELLSTALP
Trigger: TGGGAGAGCTGTTGACAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCCCACTTGAGTCGTAAGCCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp CCACGGGAGAGCACAGGGTACCATCCCAGGACGGCCTaGCTTCACCCTTCAGAGACAGTTCACTTCTATTAC +
Preference number: 3 (lower is better)
Translates to: PRESTGYHPRTA*LHPSETVHFYY
Trigger: GTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGATGGTACCCTGTGCTCTCCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp ACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATaGCACAACCCGACGGGCGCTGAGGAAGCACGATTA +
Preference number: 3 (lower is better)
Translates to: TCKRRRSLQIQG*HNPTGAEEARL
Trigger: TAATCGTGCTTCCTCAGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CCA 72 bp GAGGCGACTCCAAGCTCTCTTGCTGGCTCCCAGCTGTaGGAATCCTTTAGGCTTGTTCTCAACCTACACGTT +
Preference number: 3 (lower is better)
Translates to: EATPSSLAGSQL*ESFRLVLNLHV
Trigger: AACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAGCAAGAGAGCTTGGAGTCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp AGATCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTaGAGCACCCACTTCAGCTGTGAATGGGGCATGCCT +
Preference number: 3 (lower is better)
Translates to: RSSHQLLPCSRR*STHFSCEWGMP
Trigger: AGGCATGCCCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCACCGGCCAGTGGCAGCTaGTGGGCTGCTGTAGGCCGT +
Preference number: 3 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPPASGS*WAAVGR
Trigger: ACGGCCTACAGCAGCCCACAAGCTGCCACTGGCCGG...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGAAGGAAATGTCCATGTaGCTTTTCACGGGGAACAAA +
Preference number: 3 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEKEMSM*LFTGNK
Trigger: TTTGTTCCCCGTGAAAAGCAACATGGACATTTCCTT...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR TCA 72 bp CTGAGGAAGCACGATTATCTAAGAAAAAGCCACTGTTaGACAACAACGCGCAGCACGGCGCCTGATCTGCAC +
Preference number: 3 (lower is better)
Translates to: LRKHDYLRKSHC*TTTRSTAPDLH
Trigger: GTGCAGATCAGGCGCCGTGCTGCGCGTTGTTGTTCAACAGTGGCTTTTTCTTAGATAATCGTGCTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp TGTAGACACGCACACACAGATCCTCTCACCAACTTCTaGCTTGTTCAAGACGTTGCAGCACCCACTTCAGCT +
Preference number: 3 (lower is better)
Translates to: CRHAHTDPLTNF*LVQDVAAPTSA
Trigger: AGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGATCTGTGTGTGCGTGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAATCACCAACTTCTGCCTaGTTCAAGACGTTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKSPTSA*FKTLQH
Trigger: GTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGA...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR-3UTR CAA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAAGATGCACTAGGTTCTaGACACAACGTGGACCTGTG +
Preference number: 3 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKRCTRF*TQRGPV
Trigger: CACAGGTCCACGTTGTGTCAAGAACCTAGTGCATCT...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp AACACTGACACAGAGACACTGACAGACACACACAGATaGACTAGGTTCTTGACACAACGTGGACCTGTGTTT +
Preference number: 3 (lower is better)
Translates to: NTDTETLTDTHR*TRFLTQRGPVF
Trigger: AAACACAGGTCCACGTTGTGTCAAGAACCTAGTGCATCTGTGTGTGTCTGTCAGTGTCTCTGTGTCAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR TCA 72 bp AGAATACCAGTAGAAATAGTGCATTTCCAGAATTGCTaGTGGGAGGTGGCAGGTCCCATGGTTTTGACCCAT +
Preference number: 3 (lower is better)
Translates to: RIPVEIVHFQNC*WEVAGPMVLTH
Trigger: ATGGGTCAAAACCATGGGACCTGCCACCTCCCATCAGCAATTCTGGAAATGCACTATTTCTACTGGTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR GCA 72 bp GAGATGAAACCACGACTTCGTCAAGCCACATTTGGTTaGCATAAGATTCCAAAGGATTCTATCCTCTTAATG +
Preference number: 3 (lower is better)
Translates to: EMKPRLRQATFG*HKIPKDSILLM
Trigger: CATTAAGAGGATAGAATCCTTTGGAATCTTATGGCAACCAAATGTGGCTTGACGAAGTCGTGGTTTCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAGCTGGCCGGAGGTGCTaGCAGGGGAGCACCCCACAC +
Preference number: 4 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAAGRRC*QGSTPH
Trigger: GTGTGGGGTGCTCCCCTGCCAGCACCTCCGGCCAGC...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAACCGTCTCGCGGAGCTaGAGCACGCTGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: APTWPTGAEGGLRSSRSATVSRS*STLLRS
Trigger: GCTCCGGAGCAGCGTGCTGCAGCTCCGCGAGACGGT...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCACGTAGGAGAAGGGCGTaGCCACACCTGGCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: APTWPTGAEGGLRSSRSARRRRA*PHLAWR
Trigger: GCGCCACGCCAGGTGTGGGCACGCCCTTCTCCTACG...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCACAGGCTGTGTGCGTGTaGGTGTGCAGGGGCGACGGC +
Preference number: 4 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAQAVCV*VCRGDG
Trigger: GCCGTCGCCCCTGCACACGCACACGCACACAGCCTG...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGGTCGGCCCGAAATCCTaGGCCCCGGCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVVGPKS*APAPRR
Trigger: CCTCCTGGGCGCCGGGGCCCAGGATTTCGGGCCGAC...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CATGCAGGTGCGGGAACACATGTCGGACCCAGGGAGCAAGGAACACGCCACCCCGGAGCTGCAGCACGCTaGTCCGGAGCTCCTCGGCGC +
Preference number: 4 (lower is better)
Translates to: HAGAGTHVGPREQGTRHPGAAAR*SGAPRR
Trigger: GCGCCGAGGAGCTCCGGAGCAGCGTGCTGCAGCTCC...GGGGTGGCGTGTTCCTTGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTGCCAAAGGAGAGGGGTaGTGGGGCCCGGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPAKGEG*WGPASR
Trigger: CCGGGAAGCCGGGCCCCAGCACCCCTCTCCTTTGGC...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGATCTAAGCCCCTGAGGGCCCGGAGAGCTTCTGTCAACAGCTCTCCCACCCCGTGGGTTTCAGGCCCCTaGCCTGGCCAGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSKPLRARRASVNSSPTPWVSGP*PGQAWL
Trigger: GAGCCAGGCCTGGCCAGGGCAGGGGCCTGAAACCCA...CGGGGTGGGAGAGCTGTTGACAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGCGGCTTCCCGGGCTGTaGGTGGCACGCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRRLPGL*VARSSL
Trigger: GAGAGAGGAGCGTGCCACCCACAGCCCGGGAAGCCG...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCCGGACAGCTCCCACCTaGCCCACGGGGGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCRTAPT*PTGAEG
Trigger: ACCTTCTGCCCCCGTGGGCCAGGTGGGAGCTGTCCG...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTGCACGCCCTGGGGCTTaGTGGGGTGATAGGGCGCCA +
Preference number: 4 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAARPGA*WGDRAP
Trigger: TGGCGCCCTATCACCCCATCAAGCCCCAGGGCGTGC...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCCGCCCATGGTGTTCTTaGCCGAGCCGGGCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCRPWCS*PSRAAC
Trigger: GCAAGCAGCCCGGCTCGGGCAAGAACACCATGGGCG...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTAGTGTGCGTGTGCGTGTaGAGGGGCGACGGCCTCGGT +
Preference number: 4 (lower is better)
Translates to: GALRACDHQMVQSRKLLLVCVCV*RGDGLG
Trigger: ACCGAGGCCGTCGCCCCTGCACACGCACACGCACAC...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTGCCCGCACCGGGCGTTaGCTACACAAGGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPARTGR*LHKGSE
Trigger: CTCGGAGCCCTTGTGTAGGCAACGCCCGGTGCGGGC...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTAGCGGGCCAGGAGGCTaGAGGGGTGGAGGCGTAAGC +
Preference number: 4 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPASGPGG*RGGGVS
Trigger: GCTTACGCCTCCACCCCTGCAGCCTCCTGGCCCGCT...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTGGGCGTGCCCACACCTaGCGTGGCGCTGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAGRAHT*RGAGLE
Trigger: CTCAAGTCCAGCGCCACGCCAGGTGTGGGCACGCCC...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCGCACCGAGGTGCAGATaGAGCGCGTCGGCCCGAAAT +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCAPRCR*SASARN
Trigger: ATTTCGGGCCGACGCGCTTCATCTGCACCTCGGTGC...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCTTTGCCCGAGTTGGCTaGGCGTCTCGGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VNGACLRESGLLQRSGASFARVG*ASRRPV
Trigger: CACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAA...GGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAAGGGCCTCCCGAGCCTaGTCTCTTTCTCACTTAGCG +
Preference number: 4 (lower is better)
Translates to: APTWPTGAEGGLRSSRSARASRA*SLSHLA
Trigger: CGCTAAGTGAGAAAGAGAGCAGGCTCGGGAGGCCCT...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCAGAGACAGAGTCGGGGTaGCCTCAGGGCGTGCGACCA +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSETESG*PQGVRP
Trigger: TGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTC...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCGGGATGGATGCTGTCTaGCCCTGGGGTAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPGMDAV*PWGKGQ
Trigger: CTGGCCCTTACCCCAGGGCCAGACAGCATCCATCCC...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTCTTTCTCGAGCTCGCTaGTCCGCTGGTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPLSRAR*SAGAGR
Trigger: CCTCCCTGCACCAGCGGATCAGCGAGCTCGAGAAAG...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCGTCTGCAGCTGCAGCTaGGCCAGGCAGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPVCSCS*ARQCSR
Trigger: TCTACTGCACTGCCTGGCTCAGCTGCAGCTGCAGAC...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCATGGTCTCCTTCTGCTaGAGCACCGTCTCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPMVSFC*STVSRS
Trigger: GCTCCGCGAGACGGTGCTGCAGCAGAAGGAGACCAT...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTCTCCGGGGTCCAGCGTaGTCTGGCTCTCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLLRGPA*SGSRSG
Trigger: GCCGCTGCGAGAGCCAGAGCACGCTGGACCCCGGAG...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTGGTGCCCTCAGGGCGTaGGACCACCAGATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPGALRA*DHQMVQ
Trigger: TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGCTGCAGATCCAAGGATaGCACAACCCGACGGGCGCT +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRLQIQG*HNPTGA
Trigger: AGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAG...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACACTGGGGTGTGCTCTaGCCCTCGCTAGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GALRACDHQMVQSRKLLLHWGVL*PSLVRA
Trigger: TGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTG...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCGGTCAGCTCGCGGATaGTCTCCTTCTGGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVRSARG*SPSGSG
Trigger: TCCTGAGCCAGAAGGAGACCATCCGCGAGCTGACCG...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTGGGTCCAGCGTGCTCTaGCTCTCGCAGCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPGSSVL*LSQRPS
Trigger: GCTGGGCCGCTGCGAGAGCCAGAGCACGCTGGACCC...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTTGCCGGACAGAGCCTTaGTGCTGCAGGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPCRTEP*CCRWPG
Trigger: ACCTGGCCACCTGCAGCACCAAGGCTCTGTCCGGCA...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCTCTCTCAGGGCCCTCTaGGCTGAAGCAGTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCSLRAL*AEAVQH
Trigger: GTGCTGCACTGCTTCAGCCCAGAGGGCCCTGAGAGA...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCACTGAACCAGCTCACCTaGCGCCTGGTGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSLNQLT*RLVCWE
Trigger: CTCCCAGCACACCAGGCGCCAGGTGAGCTGGTTCAG...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCCCCTGGCACCATGGGTaGGTCAGAGGAGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VNGACLRESGLLQRSGASPWHHG*VRGGVR
Trigger: CCTCACCCCTCCTCTGACCCACCCATGGTGCCAGGG...GGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCATTCAGCCCAGGCGATaGCATTGCCGGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPIQPRR*HCRTEP
Trigger: AGGCTCTGTCCGGCAATGTCATCGCCTGGGCTGAAT...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTAGGATGGTCTCCTTCTaGTGCAGCACCGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPRMVSF*CSTVSR
Trigger: CCGCGAGACGGTGCTGCAGCAGAAGGAGACCATCCT...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTCAGCCTGGCCTGCCGTaGTCAGTTGATCTGGCGACA +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPQPGLP*SVDLAT
Trigger: TGTCGCCAGATCAACTGAGCACGGCAGGCCAGGCTG...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGGCGACCACCAGATGGTaGAAAGCAGGAAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRATTRW*KAGSSS
Trigger: GGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGC...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTAAAGTTTGCCCGAGTTaGCTGAGCGTCTCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPKVCPS*LSVSAA
Trigger: GGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTT...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCTTGGTGCTGCAGGTaGCCAGGTTGTACACCTCCC +
Preference number: 4 (lower is better)
Translates to: GALRACDHQMVQSRKLLLPWCCR*PGCTPP
Trigger: GGGAGGTGTACAACCTGGCCACCTGCAGCACCAAGG...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAACGAAGGTCCACTTGGTaGCCCCTCCGTAGATCTCGA +
Preference number: 4 (lower is better)
Translates to: SWRQSRGALRACDHQMVQRRSTW*PLRRSR
Trigger: TCGAGATCTACGGAGGGGCCACCAAGTGGACCTTCG...TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCCCTCGAAGGTCCACTTaGTGGCCCCTCCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPPRRST*WPLRRS
Trigger: AGATCTACGGAGGGGCCACCAAGTGGACCTTCGAGG...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCAGATGCTGTCTGGCCCTaGGGTAAGGGCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSDAVWP*GKGQCP
Trigger: AGGACACTGGCCCTTACCCCAGGGCCAGACAGCATC...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGCCCAGTGGCCCCATGTaGCCAGGTCTTCATCGAAAC +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRPSGPM*PGLHRN
Trigger: GTTTCGATGAAGACCTGGCCACATGGGGCCACTGGG...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCGTGAGCCCCATGAGATaGAGGAGTGGGTTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCVSPMR*RSGFQA
Trigger: GGCCTGAAACCCACTCCTCCATCTCATGGGGCTCAC...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCCGTGCGACCACCAGATaGTGCAAAGCAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCRATTR*CKAGSS
Trigger: GGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACG...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTCACAAGACACCCCCTTaGTCTCAGGTCCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPHKTPP*SQVPGL
Trigger: CAGCCCTGGGACCTGAGACCAAGGGGGTGTCTTGTG...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCCCTCTGGGCTaGAGCAGTGCAGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPQGPLG*SSAAQL
Trigger: GAGCTGTGCTGCACTGCTTCAGCCCAGAGGGCCCTG...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGGCTCACTGGAATGACTaGACCTCATGCCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRAHWND*TSCQPL
Trigger: GAGAGGCTGGCATGAGGTTCAGTCATTCCAGTGAGC...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAATGGAGCTCACTGGAATaGCTGAACCTCATGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SWRQSRGALRACDHQMVQWSSLE*LNLMPA
Trigger: GGCTGGCATGAGGTTCAGTCATTCCAGTGAGCTCCA...TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTCACTGCCACCCTGCGTaGCATCCTGGTAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLHCHPA*HPGRPP
Trigger: GGGAGGCCTACCAGGATGGCACGCAGGGTGGCAGTG...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCACATCCCAGGACGGCCTaGCTTCACCCTTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSHPRTA*LHPSET
Trigger: TGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGATG...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTAGCTCGCTGATCCGCTaGTGCAGGGAGGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPSSLIR*CREVRA
Trigger: CGCCCTGACCTCCCTGCACCAGCGGATCAGCGAGCT...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCAGTGGGAATGTGAGCTaGAACTTGTCTCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCSGNVS*NLSPGR
Trigger: CCGCCCTGGAGACAAGTTCCAGCTCACATTCCCACT...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCATTAAAAGGTCCCCTCTaGTCTGCACTGCCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSLKGPL*SALPEA
Trigger: GGCCTCCGGCAGTGCAGACCAGAGGGGACCTTTTAA...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCAGCTCACCTGGCGCCTaGTGTGCTGGGAGGGATATG +
Preference number: 4 (lower is better)
Translates to: VNGACLRESGLLQRSGASSSPGA*CAGRDM
Trigger: CATATCCCTCCCAGCACACCAGGCGCCAGGTGAGCT...GGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTCATGAGATGGAGGAGTaGGTTTCAGGCCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAHEMEE*VSGPCP
Trigger: AGGGCAGGGGCCTGAAACCCACTCCTCCATCTCATG...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCACCCGCCCCCGGCCTTTaGCAAACCACTAAAAGACAT +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSPAPGL*QTTKRH
Trigger: ATGTCTTTTAGTGGTTTGTCAAAGGCCGGGGGCGGG...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTTGGGATCTAAGCCCCTaGGGGCCCGGAGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPWDLSP*GPGELL
Trigger: CAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCCCA...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGGCGGGAGTGATGCATTaGAGAACGGCGGCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEAGVMH*RTAAGY
Trigger: GTACCCGGCCGCCGTTCTGCAATGCATCACTCCCGC...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGGTGCTGGGAGGGATATaGCTGTCAAAGTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRVLGGI*LSKSPK
Trigger: TTTGGGGGACTTTGACAGCCATATCCCTCCCAGCAC...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTAGTGTCGCCGGCCAGTaGCAGCTTGTGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPSVAGQ*QLVGCC
Trigger: ACAGCAGCCCACAAGCTGCCACTGGCCGGCGACACT...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGCCTGCCGTGCTCAGTTaGTCTGGCGACAGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTPAVLS*SGDRPR
Trigger: TCGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGG...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTCAGCCTTGCAGGATCTaGGGAGGTGGGAAGGTCGAG +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPQPCRI*GGGKVE
Trigger: CTCGACCTTCCCACCTCCTCAGATCCTGCAAGGCTG...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGAGAAAAAGCCACTGTTaGACAACAACGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRRKSHC*TTTRST
Trigger: CGTGCTGCGCGTTGTTGTTCAACAGTGGCTTTTTCT...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGAGGTCCCCTCTGGTCTaGACTGCCGGAGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTRSPLV*TAGGQR
Trigger: CCTTTGGCCTCCGGCAGTGCAGACCAGAGGGGACCT...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTAAAAGGTTCTGGACACTaGTCAGGTGTCAGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: GALRACDHQMVQSRKLLLKGSGH*SGVSVA
Trigger: GGCGACACTGACACCTGAGCAGTGTCCAGAACCTTT...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGGAAGGCGTACATCTCTaGCAGGCTCTTCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGREGVHL*QALLHL
Trigger: AAGGTGAAGAAGAGCCTGCCAGAGATGTACGCCTTC...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTTTCCCACCGATGGGCTaGGTTGAAGTCCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLFPPMG*VEVPVA
Trigger: GGCCACTGGGACTTCAACCCAGCCCATCGGTGGGAA...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCAGCTTTTGAGAACAGGTaGCCCCTCTTTGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSAFENR*PLFGAH
Trigger: GTGAGCTCCAAAGAGGGGCCACCTGTTCTCAAAAGC...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTTCTGGCTGGAGGAATTaGGGCGGCTGTACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPSGWRN*GGCTAR
Trigger: TCGAGCAGTACAGCCGCCTCAATTCCTCCAGCCAGA...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTTGGGGCAGAGCTAGCTaGGCTGGGCACACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCWGRAS*AGHTGR
Trigger: TCGGCCTGTGTGCCCAGCTCAGCTAGCTCTGCCCCA...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCCTCGGGTTTTGAGCGATTaGAAAGTTTGCCCGAGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGRATTRWCKAGSSSYPRVLSD*KVCPSW
Trigger: CCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCG...AGGGTAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTATCATCGATCTTGCTCTaGAGCAGATCCTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GALRACDHQMVQSRKLLLSSILL*SRSLRL
Trigger: CAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGA...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGGCTGTGAATGGGGCATaGCTGAGAGAGTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTAVNGA*LRESGL
Trigger: GAGCCCGGACTCTCTCAGGCATGCCCCATTCACAGC...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGAACCGGGGCAGTCCATaGAGGTGCGGGAACACATGT +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVENRGSP*RCGNTC
Trigger: ACATGTGTTCCCGCACCTGCATGGACTGCCCCGGTT...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCATCCCAGATGTTGAAGTaGGCCAGCTCACCCACAAAT +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSSQMLK*ASSPTN
Trigger: ATTTGTGGGTGAGCTGGCCCACTTCAACATCTGGGA...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGCGTGCTCAGTTGATCTaGCGACAGGCCTCGAAGGTC +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVERAQLI*RQASKV
Trigger: GACCTTCGAGGCCTGTCGCCAGATCAACTGAGCACG...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GCTCTCAGATGCAAACAGCAGGGATGGATGCTGTCTGGCCCTGGGGTAAGGGCCCACTTCAGCTGTGAATaGGGCATGCCTGAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALRCKQQGWMLSGPGVRAHFSCE*GMPERV
Trigger: GACTCTCTCAGGCATGCCCCATTCACAGCTGAAGTG...GGCCCTTACCCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCATCTGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTTTCCCGGGCTGTGGGTaGCACGCTCCTCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCFPGCG*HAPLSG
Trigger: CCCTGAGAGAGGAGCGTGCCACCCACAGCCCGGGAA...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTTCTCTGGAGTACCCCTaGAGGGGTCTGAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPSLEYP*RGLNQL
Trigger: GAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGCATTTCCAGAATTGCTaGTGGGAGGTGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEHFQNC*WEVAGP
Trigger: GGGACCTGCCACCTCCCATCAGCAATTCTGGAAATG...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GCTCTCAGATGCAAACAGCAGGGATGGATGCTGTCTGGCCCTGGGGTAAGGGCCCCTTGTTCAAGACGTTaGAGCACCCACTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ALRCKQQGWMLSGPGVRAPCSRR*STHFSC
Trigger: ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGG...GGCCCTTACCCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCATCTGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTACCTCCCAGGCCCCATaGTGCTCTCAGATGCAAACA +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLTSQAP*CSQMQT
Trigger: TGTTTGCATCTGAGAGCAGCATGGGGCCTGGGAGGT...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTATAGTTGGTCCGCAGTaGGAATGTGAGCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAIVGPQ*ECELEL
Trigger: AAGTTCCAGCTCACATTCCCACTGCGGACCAACTAT...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGGCTCCTACAGAGAAGTaGGGCTTCCTCAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEAPTEK*GFLRDR
Trigger: TCTGTCCCTGAGGAAGCCCCACTTCTCTGTAGGAGC...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGTGGCGCCTGGTGTGCTaGGAGGGATATGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTWRLVC*EGYGCQ
Trigger: TTGACAGCCATATCCCTCCCAGCACACCAGGCGCCA...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCAAAGGCAAAAAGGTTCTaGACACTGCTCAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSKAKRF*TLLRCQ
Trigger: CTGACACCTGAGCAGTGTCCAGAACCTTTTTGCCTT...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTTCCAAGCTCTCTTGCTaGCTCCCAGCTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLSKLSC*LPAVGI
Trigger: GATTCCCACAGCTGGGAGCCAGCAAGAGAGCTTGGA...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTTCTCCAGGCGGGTTTTaGGCGATTGCAAAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPSPGGF*AIAKFA
Trigger: GGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGA...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGCACCCACGAGAACACTaGCACAGAGACACTGACAGA +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEHPREH*HRDTDR
Trigger: TCTGTCAGTGTCTCTGTGTCAGTGTTCTCGTGGGTG...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAACCCCCTCTGCGGGAGTaGTGCATTGCAGAACGGCGG +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKPPLRE*CIAERR
Trigger: CCGCCGTTCTGCAATGCATCACTCCCGCAGAGGGGG...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTGATGGCTCATGGTCCTaGACGGACAGCTCCCACCTG +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCDGSWS*TDSSHL
Trigger: CAGGTGGGAGCTGTCCGTTCAGGACCATGAGCCATC...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTACCCGGGACAGCACCTaGCTCTCCAGCTCATCGATC +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCTRDST*LSSSSI
Trigger: GATCGATGAGCTGGAGAGGCAGGTGCTGTCCCGGGT...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAATCGCTGATCCGCTGGTaGAGGGAGGTCAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKSLIRW*REVRAV
Trigger: GACCGCCCTGACCTCCCTGCACCAGCGGATCAGCGA...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTCCAAGTTCTCGCCACTaGCACCCTGCGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCPSSRH*HPACHP
Trigger: AGGATGGCACGCAGGGTGGCAGTGGCGAGAACTTGG...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGACAGAGCCTTGGTGCTaGAGGTGGCCAGGTTGTACA +
Preference number: 4 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTTEPWC*RWPGCT
Trigger: TGTACAACCTGGCCACCTGCAGCACCAAGGCTCTGT...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTTCCTCACCCCCTCACTaGCCACAAGACACCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCSSPPH*PQDTPL
Trigger: CAAGGGGGTGTCTTGTGGGCAGTGAGGGGGTGAGGA...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGGCTGGCTCCCAGCTGTaGGAATCCTTTAGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEAGSQL*ESFRLV
Trigger: AACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAGC...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CATGCAGGTGCGGGAACACATGTCGGACCCAGGGAGCAAGGAACACGCCACCCCGAAGAAAGAAGGAAATaGGGTACGTCCTCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: HAGAGTHVGPREQGTRHPEERRK*GTSSKK
Trigger: TTTCTTTGAGGACGTACCTCATTTCCTTCTTTCTTC...GGGGTGGCGTGTTCCTTGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTGACAAATGCGTGTACTaGGGTTGCACCAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: RLVSGLLMRLLETESGCPDKCVY*GCTNPK
Trigger: TTTGGGGTTGGTGCAACCTCAGTACACGCATTTGTC...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAGCCTGGCTCCACACGTaGGGTCTCTGGAGTACCCCT +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKAWLHT*GLWSTP
Trigger: AGGGGTACTCCAGAGACCTCACGTGTGGAGCCAGGC...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGGATGCACTAGGTTCTTaGCACAACGTGGACCTGTGT +
Preference number: 4 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEDALGS*HNVDLC
Trigger: ACACAGGTCCACGTTGTGTCAAGAACCTAGTGCATC...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTATCTATCCTCTTAATGTaGACCACATGTAACCCAAGG +
Preference number: 4 (lower is better)
Translates to: GALRACDHQMVQSRKLLLSILLM*TTCNPR
Trigger: CCTTGGGTTACATGTGGTTCACATTAAGAGGATAGA...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp GGATCTAAGCCCCTGAGGGCCCGGAGAGCTTCTGTCAACAGCTCTCCCACCCCGAGGCTGCAGATCATATaGAAAATGTACAGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GSKPLRARRASVNSSPTPRLQII*KMYSFG
Trigger: ACCAAAGCTGTACATTTTTCATATGATCTGCAGCCT...CGGGGTGGGAGAGCTGTTGACAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATGGGCTCAGCCTGGCCTaGCGTGCTCAGTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNGLSLA*RAQLIW
Trigger: CCAGATCAACTGAGCACGGCAGGCCAGGCTGAGCCC...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTAACGGAGAAGATCCCTaGAGATCCAAGGATGCCACA +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLNGEDP*RSKDAT
Trigger: TGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTT...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCCAAGCCACATTTGGTTaGCATAAGATTCCAAAGGAT +
Preference number: 4 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPQATFG*HKIPKD
Trigger: ATCCTTTGGAATCTTATGGCAACCAAATGTGGCTTG...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATGCCAGTGGCAGCTTGTaGGCTGCTGTAGGCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNASGSL*AAVGRE
Trigger: CTCACGGCCTACAGCAGCCCACAAGCTGCCACTGGC...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAAGGAGGCTGCAGGGGTaGAGGCGTAAGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKRRLQG*RRKHWG
Trigger: ACCCCAGTGCTTACGCCTCCACCCCTGCAGCCTCCT...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATTGCGGTCCCAGATGTTaGAGTGGGCCAGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNCGPRC*SGPAHP
Trigger: TGGGTGAGCTGGCCCACTTCAACATCTGGGACCGCA...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATGGCAGTCCATGCAGGTaGGGGAACACATGTCGGACC +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNGSPCR*GNTCRT
Trigger: GGTCCGACATGTGTTCCCGCACCTGCATGGACTGCC...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGAGTTCTACGTTTTGGTaGAGCCTGAAAGTATTTTCA +
Preference number: 4 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRSSTFW*SLKVFS
Trigger: TGAAAATACTTTCAGGCTCCACCAAAACGTAGAACT...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 72 bp CTGAGCTCTCTCTTGACCTCCTCCAACACCCTTGACTaGCTTACCCAGCCATTTTCAGTAGCTACACGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSLLTSSNTLD*LTQPFSVATRV
Trigger: CACCCGTGTAGCTACTGAAAATGGCTGGGTAAGCAAGTCAAGGGTGTTGGAGGAGGTCAAGAGAGAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTCGTTTTGGTGGAGCCTaGAAGTATTTTCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLRFGGA*KYFQGR
Trigger: TCTCCCTTGAAAATACTTTCAGGCTCCACCAAAACG...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp GCTCTCAGATGCAAACAGCAGGGATGGATGCTGTCTGGCCCTGGGGTAAGGGCCAGGAAATGTCCATGTTaGTTTTCACGGGGAACAAAA +
Preference number: 4 (lower is better)
Translates to: ALRCKQQGWMLSGPGVRARKCPC*FSRGTK
Trigger: TTTTGTTCCCCGTGAAAAGCAACATGGACATTTCCT...GGCCCTTACCCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCATCTGAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTACACACACACACAAATaGACATACACTTCTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLTHTHK*TYTSLP
Trigger: GGGGAGAGAAGTGTATGTGCATTTGTGTGTGTGTGT...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATTGCAAACAGCAGGGATaGATGCTGTCTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNCKQQG*MLSGPG
Trigger: CCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCA...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATGTGGTCACAGAACACTaGGCGGCACTCGGCACACAA +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNVVTEH*AALGTQ
Trigger: TTGTGTGCCGAGTGCCGCCCAGTGTTCTGTGACCAC...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAGCTGCTTCGTGTGCATaGGGACAAAACCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKAASCA*GQNQAV
Trigger: CACAGCCTGGTTTTGTCCTCATGCACACGAAGCAGC...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAAGGGGCTGCTTCGTGTaGATGAGGACAAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKRGCFV*MRTKPG
Trigger: GCCTGGTTTTGTCCTCATGCACACGAAGCAGCCCCT...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCACCGATGGGCTGGGTTaGAGTCCCAGTGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGTDGLG*SPSGPM
Trigger: CATGGGGCCACTGGGACTTCAACCCAGCCCATCGGT...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATGCCTCGGTTCATTCCTaGGGAAAAGGGAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNASVHS*GKGREE
Trigger: CTCTTCTCTCCCTTTTCCCCAGGAATGAACCGAGGC...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCTGGAGGCGTAAGCACTaGGGTGTGCTCTGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGWRRKH*GVLCPS
Trigger: CGAGGGGCAGAGCACACCCCAGTGCTTACGCCTCCA...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 72 bp GAGACACTGACAGACACACACAGATGCACTAGGTTCTaGACACAACGTGGACCTGTGTTTAAGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ETLTDTHRCTRF*TQRGPVFKGTG
Trigger: ACCTGTCCCCTTAAACACAGGTCCACGTTGTGTCAAGAACCTAGTGCATCTGTGTGTGTCTGTCAGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGGGCGGTCTCGATCTTaGCCCTCTCCTCGGTGTCGT +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPGRSRS*PSPRCR
Trigger: ACGACACCGAGGAGAGGGTCAAGATCGAGACCGCCC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 72 bp AGATTAAGGAGTAAATGGGAACTACGTGGATTAGATTaGCGGCTGTGTCATCGACCTTTCTCGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLRSKWELRGLD*RLCHRPFSGPA
Trigger: TGCTGGCCCCGAGAAAGGTCGATGACACAGCCGCAAATCTAATCCACGTAGTTCCCATTTACTCCTTAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTACTGTGTTTAAGAGATaGAACCACGACTTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCTVFKR*NHDFVK
Trigger: CTTGACGAAGTCGTGGTTTCATCTCTTAAACACAGT...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAACCTCTCACCAACTTCTaGCTTGTTCAAGACGTTGCA +
Preference number: 4 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKPLTNF*LVQDVA
Trigger: TGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGG...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATCCAACACCCTTGACTTaGTTACCCAGCCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNPTPLT*LPSHFQ
Trigger: CTGAAAATGGCTGGGTAAGCAAGTCAAGGGTGTTGG...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGGGCAGAAGGTGGTCTaGGGTCCAGTAGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPGQKVV*GPVDRQ
Trigger: CTGCCGATCTACTGGACCGCAGACCACCTTCTGCCC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGGACCTTCCCACCGATaGGCTGGGTTGAAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPGPSHR*AGLKSQ
Trigger: CTGGGACTTCAACCCAGCCCATCGGTGGGAAGGTCC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCACAAGTGTCAACACAGTaGGGGAGTCGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPQVSTQ*GSRGAW
Trigger: CCAAGCCCCTCGACTCCCTCACTGTGTTGACACTTG...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCTCCCAGGCCCCATGCTaGTCTCAGATGCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGSQAPC*SQMQTA
Trigger: TGCTGTTTGCATCTGAGAGCAGCATGGGGCCTGGGA...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCCCACCCCGAGGAACATaGAAACGGAGAAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGPPRGT*KRRRSL
Trigger: CAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGG...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGACTCCAAGCTCTCTTaGTGGCTCCCAGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPDSKLS*WLPAVG
Trigger: TCCCACAGCTGGGAGCCAGCAAGAGAGCTTGGAGTC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCAGTCAGGGCAGAGGATaGCTCATGGTCCTGAACGGA +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGSQGRG*LMVLNG
Trigger: TCCGTTCAGGACCATGAGCCATCCTCTGCCCTGACT...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 72 bp AAGGTTTGCAAACAAAGACAAATGCGTGTACTGAGGTaGCACCAACCCCAAAGCACGCACGCAGCTAACAAA +
Preference number: 4 (lower is better)
Translates to: KVCKQRQMRVLR*HQPQSTHAANK
Trigger: TTTGTTAGCTGCGTGCGTGCTTTGGGGTTGGTGCAACCTCAGTACACGCATTTGTCTTTGTTTGCAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 72 bp CTCTTGCTGGCTCCCAGCTGTGGGAATCCTTTAGGCTaGTTCTCAACCTACACGTTAAAAATGCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLLAPSCGNPLG*FSTYTLKMLLG
Trigger: ACCAAGAAGCATTTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAGCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCATCCGCAGTGGGAATGTaGGCTGGAACTTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPSAVGM*AGTCLQ
Trigger: CTGGAGACAAGTTCCAGCTCACATTCCCACTGCGGA...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAGCCACATGCAGACAGTaGAGGCGTACATCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPATCRQ*RRTSLA
Trigger: TGCCAGAGATGTACGCCTTCACTGTCTGCATGTGGC...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR GCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCAGCGATTGCAAAGTTTaGCCGAGTTGGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGSDCKV*PSWLSV
Trigger: GACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCT...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
3UTR CAA 72 bp AGCAAGAATACCAGTAGAAATAGTGCATTTCCAGAATaGCTGATGGGAGGTGGCAGGTCCCATGGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: SKNTSRNSAFPE*LMGGGRSHGFD
Trigger: GTCAAAACCATGGGACCTGCCACCTCCCATCAGCAATTCTGGAAATGCACTATTTCTACTGGTATTCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCACTCCTCCAACACCCTTaGCTTGCTTACCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPLLQHP*LAYPAI
Trigger: AATGGCTGGGTAAGCAAGTCAAGGGTGTTGGAGGAG...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR TCA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATATAAAATGGCTTACCTaGGAGAGGCATGTATTATTC +
Preference number: 4 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNIKWLT*ERHVLF
Trigger: GAATAATACATGCCTCTCTCAGGTAAGCCATTTTAT...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CCA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCTTCAGTTCTACGTTTTaGTGGAGCCTGAAAGTATTT +
Preference number: 4 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGFSSTF*WSLKVF
Trigger: AAATACTTTCAGGCTCCACCAAAACGTAGAACTGAA...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp GCACAAGCAGGGGGCGAGGGCGGGCGGGCTCAGCCTGGCCTGCCGTaGTCAGTTGATCTGGCGACAGGCCTCGAAGGTCCACTTGGTGGC +
Preference number: 5 (lower is better)
Translates to: AQAGGEGGRAQPGLP*SVDLATGLEGPLGG
Trigger: GCCACCAAGTGGACCTTCGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGGCCAGGCTGAGCCCGCCCGCCCTCGCCCCCTGCTTGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS GCA 90 bp TCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGGCTCAGCCTGGCCTaGCGTGCTCAGTTGATCTGGCGACAGGCCTCGAAGGTCCACTTG +
Preference number: 5 (lower is better)
Translates to: SPHKQGARAGGLSLA*RAQLIWRQASKVHL
Trigger: CAAGTGGACCTTCGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGGCCAGGCTGAGCCCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS-3UTR CAA 90 bp GGATCTAAGCCCCTGAGGGCCCGGAGAGCTTCTGTCAACAGCTCTCCCACCCCGATGAGGACCAGCTCGTaGGCCTGGCCGGGCACAGCG +
Preference number: 5 (lower is better)
Translates to: GSKPLRARRASVNSSPTPMRTSS*AWPGTA
Trigger: CGCTGTGCCCGGCCAGGCCAACGAGCTGGTCCTCAT...CGGGGTGGGAGAGCTGTTGACAGAAGCTCTCCGGGCCCTCAGGGGCTTAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAGCCCAGGCGATGACATaGCCGGACAGAGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAAQAMT*PDRALV
Trigger: CACCAAGGCTCTGTCCGGCAATGTCATCGCCTGGGC...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCATGCGGGAGTGATGCATaGCAGAACGGCGGCCGGGTA +
Preference number: 5 (lower is better)
Translates to: APTWPTGAEGGLRSSRSACGSDA*QNGGRV
Trigger: TACCCGGCCGCCGTTCTGCAATGCATCACTCCCGCA...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CATGCAGGTGCGGGAACACATGTCGGACCCAGGGAGCAAGGAACACGCCACCCCTCGCCCATGGTGTTCTaGCCCGAGCCGGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: HAGAGTHVGPREQGTRHPSPMVF*PEPGCL
Trigger: CAAGCAGCCCGGCTCGGGCAAGAACACCATGGGCGA...GGGGTGGCGTGTTCCTTGCTCCCTGGGTCCGACATGTGTTCCCGCACCTGCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAAGCAGGAAGCTCCTCCTACCGGCCAGTGGCAGCTaGTGGGCTGCTGTAGGCCGT +
Preference number: 5 (lower is better)
Translates to: GALRACDHQMVQSRKLLLPASGS*WAAVGR
Trigger: ACGGCCTACAGCAGCCCACAAGCTGCCACTGGCCGG...TAGGAGGAGCTTCCTGCTTTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCCAAAGTTTGCCCGAGTaGGCTGAGCGTCTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPQSLPE*AERLGG
Trigger: GCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTG...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TGGGCTGCTGTAGGCCGTGAGCCCCATGAGATGGAGGAGTGGGTTTCAGGCCCCAGGGCGGTCTCGATCTaGACCCTCTCCTCGGTGTCG +
Preference number: 5 (lower is better)
Translates to: WAAVGREPHEMEEWVSGPRAVSI*TLSSVS
Trigger: CGACACCGAGGAGAGGGTCAAGATCGAGACCGCCCT...GGGGCCTGAAACCCACTCCTCCATCTCATGGGGCTCACGGCCTACAGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGGGCGTGGCGCTGGACTaGAGCCACATGCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVGVALD*SHMQTV
Trigger: CACTGTCTGCATGTGGCTCAAGTCCAGCGCCACGCC...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAACACCGATGGGCTGGGTaGAAGTCCCAGTGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: SWRQSRGALRACDHQMVQHRWAG*KSQWPH
Trigger: ATGGGGCCACTGGGACTTCAACCCAGCCCATCGGTG...TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGCCCACAAGACACCCCCTaGGTCTCAGGTCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLEYPWRGLNQLTWRLVCPQDTP*VSGPRA
Trigger: AGCCCTGGGACCTGAGACCAAGGGGGTGTCTTGTGG...GCACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CCA 90 bp AGGTTCTCCAGGCGGGTTTTGAGCGATTGCAAAGTTTGCCCGAGTTaGCTGAGCGTCTCGGCGGCCGGTGTCCGGGACAGGTCGCCCATG +
Preference number: 5 (lower is better)
Translates to: RFSRRVLSDCKVCPS*LSVSAAGVRDRSPM
Trigger: CATGGGCGACCTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CCA 90 bp GCTGCTGCATCAACACTGGGCTGCGTGGTGGGCATGAGAAGGGAATaGGGACAGCCGCCAAGCCAAGTCAACCCAAGGAGCAGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AAASTLGCVVGMRRE*GQPPSQVNPRSRGG
Trigger: GCCACCCCTGCTCCTTGGGTTGACTTGGCTTGGCGGCTGTCCCCATTCCCTTCTCATGCCCACCACGCAGCCCAGTGTTGATGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp GCTCTCAGATGCAAACAGCAGGGATGGATGCTGTCTGGCCCTGGGGTAAGGGCCGGGCAGACCCCAGCCTaGCAGGATCTGAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALRCKQQGWMLSGPGVRAGQTPA*QDLRRW
Trigger: CCACCTCCTCAGATCCTGCAAGGCTGGGGTCTGCCC...GGCCCTTACCCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCATCTGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCACCTCCTCCAACACCCTaGACTTGCTTACCCAGCCAT +
Preference number: 5 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAPPPTP*TCLPSH
Trigger: ATGGCTGGGTAAGCAAGTCAAGGGTGTTGGAGGAGG...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS TCA 90 bp GGGCTCCCCAAGGTGACTGCTCTAGGATGCCGCCACACTCTCAGGTaGGTAAGTGTCCTCACAGCTCAGGTTCCAGGCCTGGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GLPKVTALGCRHTLR*VSVLTAQVPGLVAS
Trigger: GGAGGCCACCAGGCCTGGAACCTGAGCTGTGAGGACACTTACTCACCTGAGAGTGTGGCGGCATCCTAGAGCAGTCACCTTGGGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS TCA 90 bp GTGCCTGGTGGGCTGCTGCATCAACACTGGGCTGCGTGGTGGGCATaGGAAGGGAATGGGGACAGCCGCCAAGCCAAGTCAACCCAAGGA +
Preference number: 5 (lower is better)
Translates to: VPGGLLHQHWAAWWA*EGNGDSRQAKSTQG
Trigger: TCCTTGGGTTGACTTGGCTTGGCGGCTGTCCCCATTCCCTTCTCATGCCCACCACGCAGCCCAGTGTTGATGCAGCAGCCCACCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 90 bp TACTGCTCGAGGTTCTCCAGGCGGGTTTTGAGCGATTGCAAAGTTTaGCCGAGTTGGCTGAGCGTCTCGGCGGCCGGTGTCCGGGACAGG +
Preference number: 5 (lower is better)
Translates to: YCSRFSRRVLSDCKV*PSWLSVSAAGVRDR
Trigger: CCTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp AGGCGGCTGTACTGCTCGAGGTTCTCCAGGCGGGTTTTGAGCGATTaGAAAGTTTGCCCGAGTTGGCTGAGCGTCTCGGCGGCCGGTGTC +
Preference number: 5 (lower is better)
Translates to: RRLYCSRFSRRVLSD*KVCPSWLSVSAAGV
Trigger: GACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTACAGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp TGGGGACAGCCGCCAAGCCAAGTCAACCCAAGGAGCAGGGGTGGCTaGAGAGGAGGAACGAGGCTAGCTACCCTGAGAGTAACCGACCTG +
Preference number: 5 (lower is better)
Translates to: WGQPPSQVNPRSRGG*RGGTRLATLRVTDL
Trigger: CAGGTCGGTTACTCTCAGGGTAGCTAGCCTCGTTCCTCCTCTGCAGCCACCCCTGCTCCTTGGGTTGACTTGGCTTGGCGGCTGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp GTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCTCCCCGGGGGTCAGCTaGCGGTCCCAGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VNGACLRESGLLQRSGASSPGVS*RSQMLK
Trigger: CTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGA...GGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTAGCCCGCACCGGGCGTaGCCTACACAAGGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: RLVSGLLMRLLETESGCPSPHRA*PTQGLR
Trigger: TCGGAGCCCTTGTGTAGGCAACGCCCGGTGCGGGCT...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS TCA 90 bp TGGTGGCCCCTCCGTAGATCTCGATGTGGGATTCAGCCCAGGCGATaGCATTGCCGGACAGAGCCTTGGTGCTGCAGGTGGCCAGGTTGT +
Preference number: 5 (lower is better)
Translates to: WWPLRRSRCGIQPRR*HCRTEPWCCRWPGC
Trigger: ACAACCTGGCCACCTGCAGCACCAAGGCTCTGTCCGGCAATGTCATCGCCTGGGCTGAATCCCACATCGAGATCTACGGAGGGGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS TCA 90 bp CAGGCCCAGAGCCCAGGAACACACACCCCTTGGTCAATCCCTGGGTaGGCAGCCGTGGTCCTGCCAGGAAGCCCAGAAAGAAACCAGTTC +
Preference number: 5 (lower is better)
Translates to: QAQSPGTHTPWSIPG*AAVVLPGSPERNQF
Trigger: GAACTGGTTTCTTTCTGGGCTTCCTGGCAGGACCACGGCTGCTCACCCAGGGATTGACCAAGGGGTGTGTGTTCCTGGGCTCTGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 90 bp CAAGGAGCTGGGAGTACTCTGGGCGCCAGGGCTCCCCAAGGTGACTaGTCTAGGATGCCGCCACACTCTCAGGTGAGTAAGTGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QGAGSTLGARAPQGD*SRMPPHSQVSKCPH
Trigger: GTGAGGACACTTACTCACCTGAGAGTGTGGCGGCATCCTAGAGCAGTCACCTTGGGGAGCCCTGGCGCCCAGAGTACTCCCAGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS CCA 90 bp GGAATGGGGACAGCCGCCAAGCCAAGTCAACCCAAGGAGCAGGGGTaGCTGCAGAGGAGGAACGAGGCTAGCTACCCTGAGAGTAACCGA +
Preference number: 5 (lower is better)
Translates to: GMGTAAKPSQPKEQG*LQRRNEASYPESNR
Trigger: TCGGTTACTCTCAGGGTAGCTAGCCTCGTTCCTCCTCTGCAGCCACCCCTGCTCCTTGGGTTGACTTGGCTTGGCGGCTGTCCCCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 90 bp GTCTGTAAAGAGCTGACCCAAGCTCTTCATGCTCCAGGTCTGGCCTaGTGTCACGCCCATGTGCTGGCATCCTTGGGGAGATGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: VCKELTQALHAPGLA*CHAHVLASLGRWGW
Trigger: CCACCCCCATCTCCCCAAGGATGCCAGCACATGGGCGTGACAGCAGGCCAGACCTGGAGCATGAAGAGCTTGGGTCAGCTCTTTACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCAATCTCCATGGGGTTGTaGCCCCACTCAATGAGGACC +
Preference number: 5 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSISMGL*PHSMRT
Trigger: GGTCCTCATTGAGTGGGGCAACAACCCCATGGAGAT...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGAGACTTGTCAGCGGTTaGCTGATGAGACTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVRLVSG*LMRLLE
Trigger: CTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTGTCCCCAACATGCTTTaGAGAACAGGTGGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAVPNML*RTGGPS
Trigger: AGAGGGGCCACCTGTTCTCAAAAGCATGTTGGGGAC...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GCTCCCACCTGGCCCACGGGGGCAGAAGGTGGTCTGCGGTCCAGTAGATCGGCAGCAGGTCCCATGGTTTaGACCCATTTGATACCCAAA +
Preference number: 5 (lower is better)
Translates to: APTWPTGAEGGLRSSRSAAGPMV*THLIPK
Trigger: TTTGGGTATCAAATGGGTCAAAACCATGGGACCTGC...TGCCGATCTACTGGACCGCAGACCACCTTCTGCCCCCGTGGGCCAGGTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp CAAGGAACACGCCACCCCGAGGAACATGCAAACGGAGAAGATCCCTaGAGATCCAAGGATGCCACAACCCGACGGGCGCAACTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: QGTRHPEEHANGEDP*RSKDATTRRAQLLP
Trigger: AGGCAGAAGTTGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGGCGTGTTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp CGTAAGCACTGGGGTGTGCTCTGCCCCTCGCTAGTCAGGGCAGAGGATGGCTCATCCAGCTCATCGATCTaGCTCTGCAGCAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: RKHWGVLCPSLVRAEDGSSSSSI*LCSRSL
Trigger: CAAGGATCTGCTGCAGAGCAAGATCGATGAGCTGGA...TGAGCCATCCTCTGCCCTGACTAGCGAGGGGCAGAGCACACCCCAGTGCTTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp GATGCCACAACCCGACGGGCGCAACTTCTGCCTTGTTCAAGACGTTaGAGCACCCACTTCAGCTGTGAATGGGGCATGCCTGAGAGAGTC +
Preference number: 5 (lower is better)
Translates to: DATTRRAQLLPCSRR*STHFSCEWGMPERV
Trigger: GACTCTCTCAGGCATGCCCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGCGCCCGTCGGGTTGTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTTTCTCCAGGCGGGTTTaGAGCGATTGCAAAGTTTGC +
Preference number: 5 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAFSRRV*SDCKVC
Trigger: GCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAA...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GGAACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATGCCACAACCCGACGGTCTGGCTGGAGGAATaGAGGCGGCTGTACTGCTCG +
Preference number: 5 (lower is better)
Translates to: GTCKRRRSLQIQGCHNPTVWLEE*RRLYCS
Trigger: CGAGCAGTACAGCCGCCTCAATTCCTCCAGCCAGAC...CGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCTTGGCCACCTTGTCATaGATGAGGATCTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: VNGACLRESGLLQRSGASLATLS*MRISMG
Trigger: CCCCATGGAGATCCTCATCAATGACAAGGTGGCCAA...GGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TTCTGTCAACAGCTCTCCCACCCCGGACACCCAGGGAGCTGTCGGACACCAGCTAAACTGAGCTCTCTCTaGACCTCCTCCAACACCCTT +
Preference number: 5 (lower is better)
Translates to: FCQQLSHPGHPGSCRTPAKLSSL*TSSNTL
Trigger: AAGGGTGTTGGAGGAGGTCAAGAGAGAGCTCAGTTT...AGCTGGTGTCCGACAGCTCCCTGGGTGTCCGGGGTGGGAGAGCTGTTGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp AGACTTGTCAGCGGTTTGCTGATGAGACTCCTGGAGACAGAGTCGGGGTGCCCTGAGCGATTGCAAAGTTaGCCCGAGTTGGCTGAGCGT +
Preference number: 5 (lower is better)
Translates to: RLVSGLLMRLLETESGCPERLQS*PELAER
Trigger: ACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTC...AGGGCACCCCGACTCTGTCTCCAGGAGTCTCATCAGCAAACCGCTGACAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGATGACAAAAGGCAACTaGGCCACCTTGTCATTGATG +
Preference number: 5 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRMTKGN*ATLSLM
Trigger: CATCAATGACAAGGTGGCCAAGTTGCCTTTTGTCAT...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGGCCTTGTTCAAGACGTaGCAGCACCCACTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEALFKT*QHPLQL
Trigger: CAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGC...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GTGAATGGGGCATGCCTGAGAGAGTCCGGGCTCCTACAGAGAAGTGGGGCTTCCCTACGTGGATTAGATTaGCGGCTGTGTCATCGACCT +
Preference number: 5 (lower is better)
Translates to: VNGACLRESGLLQRSGASLRGLD*RLCHRP
Trigger: AGGTCGATGACACAGCCGCAAATCTAATCCACGTAG...GGAAGCCCCACTTCTCTGTAGGAGCCCGGACTCTCTCAGGCATGCCCCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TCCTGGAGACAGAGTCGGGGTGCCCTCAGGGCGTGCGACCACCAGATGGTGCAAATGGTTTTGACCCATTaGATACCCAAAAGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: SWRQSRGALRACDHQMVQMVLTH*IPKRLQ
Trigger: CTGCAGCCTTTTGGGTATCAAATGGGTCAAAACCAT...TTGCACCATCTGGTGGTCGCACGCCCTGAGGGCACCCCGACTCTGTCTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp CTGACCTGCGGAAGACACAGTCCTGACATCTGCACCTGCGTGAAGTaGTTATCGGTGTCTGAGTTGAGTTCGGTCCCCACCAAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LTCGRHSPDICTCVK*LSVSELSSVPTKLC
Trigger: ACAGAGCTTGGTGGGGACCGAACTCAACTCAGACACCGATAAGCACTTCACGCAGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATTTGCCGGACAGAGCCTaGGTGCTGCAGGTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNLPDRA*VLQVAR
Trigger: CCTGGCCACCTGCAGCACCAAGGCTCTGTCCGGCAA...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CTGGCTCCCAGCTGTGGGAATCCTTTAGGCTTGTTCTCAACCTACACGTTAAAAGCCTGCCGTGCTCAGTaGATCTGGCGACAGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LAPSCGNPLGLFSTYTLKACRAQ*IWRQAS
Trigger: CGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGGC...TTTTAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCCACAGCTGGGAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp AAGAGACGCACAAAACAGATCATCGCCGCACAAGCAGGGGGCGAGGGCGGGCGGAAGGAAATGTCCATGTaGCTTTTCACGGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: KRRTKQIIAAQAGGEGGRKEMSM*LFTGNK
Trigger: TTTGTTCCCCGTGAAAAGCAACATGGACATTTCCTT...CCGCCCGCCCTCGCCCCCTGCTTGTGCGGCGATGATCTGTTTTGTGCGTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GCTCTCAGATGCAAACAGCAGGGATGGATGCTGTCTGGCCCTGGGGTAAGGGCCTCCAACACCCTTGACTaGCTTACCCAGCCATTTTCA +
Preference number: 5 (lower is better)
Translates to: ALRCKQQGWMLSGPGVRASNTLD*LTQPFS
Trigger: TGAAAATGGCTGGGTAAGCAAGTCAAGGGTGTTGGA...GGCCCTTACCCCAGGGCCAGACAGCATCCATCCCTGCTGTTTGCATCTGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GTCTCTGGAGTACCCCTGGAGGGGTCTGAACCAGCTCACCTGGCGCCTGGTGTGTTCCCTTTCAACAAATaGCACTTCAGTCCACTGTGT +
Preference number: 5 (lower is better)
Translates to: VSGVPLEGSEPAHLAPGVFPFNK*HFSPLC
Trigger: ACACAGTGGACTGAAGTGCAATTTGTTGAAAGGGAA...CACACCAGGCGCCAGGTGAGCTGGTTCAGACCCCTCCAGGGGTACTCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTAGTGCATTTCCAGAATaGCTGATGGGAGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLSAFPE*LMGGGR
Trigger: CCTGCCACCTCCCATCAGCAATTCTGGAAATGCACT...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp GTTGTCTTTCTGACCTGCGGAAGACACAGTCCTGACATCTGCACCTaGGTGAAGTGCTTATCGGTGTCTGAGTTGAGTTCGGTCCCCACC +
Preference number: 5 (lower is better)
Translates to: VVFLTCGRHSPDICT*VKCLSVSELSSVPT
Trigger: GGTGGGGACCGAACTCAACTCAGACACCGATAAGCACTTCACGCAGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAGAAAGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 90 bp AGGGCGGTTGTCTTTCTGACCTGCGGAAGACACAGTCCTGACATCTaGACCTGCGTGAAGTGCTTATCGGTGTCTGAGTTGAGTTCGGTC +
Preference number: 5 (lower is better)
Translates to: RAVVFLTCGRHSPDI*TCVKCLSVSELSSV
Trigger: GACCGAACTCAACTCAGACACCGATAAGCACTTCACGCAGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAGAAAGACAACCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTTCACCAACTTCTGCCTaGTTCAAGACGTTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLSPTSA*FKTLQH
Trigger: GTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGA...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTAGATGCACTAGGTTCTaGACACAACGTGGACCTGTG +
Preference number: 5 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLRCTRF*TQRGPV
Trigger: CACAGGTCCACGTTGTGTCAAGAACCTAGTGCATCT...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 90 bp GAATGTGAGCTGGAACTTGTCTCCAGGGCGGTTGTCTTTCTGACCTaGGGAAGACACAGTCCTGACATCTGCACCTGCGTGAAGTGCTTA +
Preference number: 5 (lower is better)
Translates to: ECELELVSRAVVFLT*GRHSPDICTCVKCL
Trigger: TAAGCACTTCACGCAGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAGAAAGACAACCGCCCTGGAGACAAGTTCCAGCTCACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS TCA 90 bp TCTTCTTCACCTTGGCATACATATAGTTGGTCCGCAGTGGGAATGTaGGCTGGAACTTGTCTCCAGGGCGGTTGTCTTTCTGACCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSSPWHTYSWSAVGM*AGTCLQGGCLSDLR
Trigger: CCGCAGGTCAGAAAGACAACCGCCCTGGAGACAAGTTCCAGCTCACATTCCCACTGCGGACCAACTATATGTATGCCAAGGTGAAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS-3UTR CAA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCCTGCAGGTGGCCAGGTaGTACACCTCCCCGGGGGTC +
Preference number: 5 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGLQVAR*YTSPGV
Trigger: GACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAG...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TGGGTTGAAGTCCCAGTGGCCCCATGTGGCCAGGTCTTCATCGAAACACGGCTTTTCGTCAAGCCACATTaGGTTGCCATAAGATTCCAA +
Preference number: 5 (lower is better)
Translates to: WVEVPVAPCGQVFIETRLFVKPH*VAIRFQ
Trigger: TTGGAATCTTATGGCAACCAAATGTGGCTTGACGAA...AAGCCGTGTTTCGATGAAGACCTGGCCACATGGGGCCACTGGGACTTCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATAATGTGAGCTGGAACTaGTCTCCAGGGCGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNNVSWN*SPGRLS
Trigger: AGACAACCGCCCTGGAGACAAGTTCCAGCTCACATT...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp TCCCAGGACGGCCTGCCTTCACCCTTCAGAGACAGTTCACTTCTATTACAAAATGGCAACTTGGCCACCTaGTCATTGATGAGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SQDGLPSPFRDSSLLLQNGNLAT*SLMRIS
Trigger: GGAGATCCTCATCAATGACAAGGTGGCCAAGTTGCC...ATTTTGTAATAGAAGTGAACTGTCTCTGAAGGGTGAAGGCAGGCCGTCCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp GACCTTTCTCGGGGCCAGCAAAGTGCCAAGTGTCAACACAGTGAGGGAGTCGAGTTTCAGTTCTACGTTTaGGTGGAGCCTGAAAGTATT +
Preference number: 5 (lower is better)
Translates to: DLSRGQQSAKCQHSEGVEFQFYV*VEPESI
Trigger: AATACTTTCAGGCTCCACCAAAACGTAGAACTGAAA...CTCGACTCCCTCACTGTGTTGACACTTGGCACTTTGCTGGCCCCGAGAAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS TCA 90 bp TCTTCTTCACCTTGGCATACATATAGTTGGTCCGCAGTGGGAATGTaGGCTGGAACTTGTCTCCAGGGCGGTTGTCTTTCTGACCTTTCT +
Preference number: 5 (lower is better)
Translates to: SSSPWHTYSWSAVGM*AGTCLQGGCLSDLS
Trigger: AGAAAGGTCAGAAAGACAACCGCCCTGGAGACAAGTTCCAGCTCACATTCCCACTGCGGACCAACTATATGTATGCCAAGGTGAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000571100.1
CDS-3UTR CAA 90 bp TCCTCTCACCAACTTCTGCCTTGTTCAAGACGTTGCAGCACCCACTTCAGCTGTGGGAATCCTTTAGGCTaGTTCTCAACCTACACGTTA +
Preference number: 5 (lower is better)
Translates to: SSHQLLPCSRRCSTHFSCGNPLG*FSTYTL
Trigger: TAACGTGTAGGTTGAGAACAAGCCTAAAGGATTCCC...ACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGGTGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCATTGCGGTCCCAGATGTaGAAGTGGGCCAGCTCACCC +
Preference number: 5 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPLRSQM*KWASSP
Trigger: GGGTGAGCTGGCCCACTTCAACATCTGGGACCGCAA...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCGCGGGTTTTGAGCGATaGCAAAGTTTGCCCGAGTTG +
Preference number: 5 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGAGFER*QSLPEL
Trigger: CAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGC...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CATGTAACCCAAGGTTCTTCTATCAAGGTTAGAACTGATATTCAAATCCTCGGCAGATCCTTGAGGCTGTaGGTCTGGCTGGAGGAATTG +
Preference number: 5 (lower is better)
Translates to: HVTQGSSIKVRTDIQILGRSLRL*VWLEEL
Trigger: CAATTCCTCCAGCCAGACCAACAGCCTCAAGGATCT...GCCGAGGATTTGAATATCAGTTCTAACCTTGATAGAAGAACCTTGGGTTACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAATGCGTGTACTGAGGTaGCACCAACCCCAAAGCACG +
Preference number: 5 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPMRVLR*HQPQST
Trigger: CGTGCTTTGGGGTTGGTGCAACCTCAGTACACGCAT...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS-3UTR CAA 90 bp CCTTTCAACAAATTGCACTTCAGTCCACTGTGTACAGAAGTAATACATTTCCCAACAGGTGGCCCCTCTTaGGAGCTCACTGGAATGACT +
Preference number: 5 (lower is better)
Translates to: PFNKLHFSPLCTEVIHFPTGGPS*ELTGMT
Trigger: AGTCATTCCAGTGAGCTCCAAAGAGGGGCCACCTGT...TGGGAAATGTATTACTTCTGTACACAGTGGACTGAAGTGCAATTTGTTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CCA 72 bp GAAACCACACCGTTAGGCGAGGCGCGGGGACCGTGCTaGAAGGCCCGCGGCGCGGTCCCCTCTGGGCGACTG +
Preference number: 6 (lower is better)
Translates to: ETTPLGEARGPC*KARGAVPSGRL
Trigger: CAGTCGCCCAGAGGGGACCGCGCCGCGGGCCTTCCAGCACGGTCCCCGCGCCTCGCCTAACGGTGTGGTTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571100.1
CDS GCA 72 bp AAGCAGGGGGCGAGGGCGGGCGGGCTCAGCCTGGCCTaGCGTGCTCAGTTGATCTGGCGACAGGCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: KQGARAGGLSLA*RAQLIWRQASK
Trigger: CTTCGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGGCCAGGCTGAGCCCGCCCGCCCTCGCCCCCTGCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS TCA 72 bp GGGCGGGCGGGCTCAGCCTGGCCTGCCGTGCTCAGTTaGTCTGGCGACAGGCCTCGAAGGTCCACTTGGTGG +
Preference number: 6 (lower is better)
Translates to: GRAGSAWPAVLS*SGDRPRRSTWW
Trigger: CCACCAAGTGGACCTTCGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGGCCAGGCTGAGCCCGCCCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS GCA 72 bp GATAGGGCGCCAAGTTCTCGCCACTGCCACCCTGCGTaGCATCCTGGTAGGCCTCCCAGACCCCGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: DRAPSSRHCHPA*HPGRPPRPRPG
Trigger: CCCGGGACGGGGTCTGGGAGGCCTACCAGGATGGCACGCAGGGTGGCAGTGGCGAGAACTTGGCGCCCTATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CCA 72 bp GGCGGGCTCAGCCTGGCCTGCCGTGCTCAGTTGATCTaGCGACAGGCCTCGAAGGTCCACTTGGTGGCCCCT +
Preference number: 6 (lower is better)
Translates to: GGLSLACRAQLI*RQASKVHLVAP
Trigger: AGGGGCCACCAAGTGGACCTTCGAGGCCTGTCGCCAGATCAACTGAGCACGGCAGGCCAGGCTGAGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CAA 72 bp CAGGTGGCCAGGTTGTACACCTCCCCGGGGGTCAGCTaGCGGTCCCAGATGTTGAAGTGGGCCAGCTCACCC +
Preference number: 6 (lower is better)
Translates to: QVARLYTSPGVS*RSQMLKWASSP
Trigger: GGGTGAGCTGGCCCACTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CAA 90 bp GCAATGGGCACAGTAGCAGGCCCAGAGCCCAGGAACACACACCCCTaGGTCAATCCCTGGGTGAGCAGCCGTGGTCCTGCCAGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: AMGTVAGPEPRNTHP*VNPWVSSRGPARKP
Trigger: GGGCTTCCTGGCAGGACCACGGCTGCTCACCCAGGGATTGACCAAGGGGTGTGTGTTCCTGGGCTCTGGGCCTGCTACTGTGCCCATTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 72 bp CTGTTGGTCTGGCTGGAGGAATTGAGGCGGCTGTACTaGTGCGGGGTGCAAGGGCGGGGGAAACCACACCGT +
Preference number: 6 (lower is better)
Translates to: LLVWLEELRRLY*CGVQGRGKPHR
Trigger: ACGGTGTGGTTTCCCCCGCCCTTGCACCCCGCAGCAGTACAGCCGCCTCAATTCCTCCAGCCAGACCAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571100.1
CDS CCA 72 bp AGGCGGGTTTTGAGCGATTGCAAAGTTTGCCCGAGTTaGCTGAGCGTCTCGGCGGCCGGTGTCCGGGACAGG +
Preference number: 6 (lower is better)
Translates to: RRVLSDCKVCPS*LSVSAAGVRDR
Trigger: CCTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 72 bp CAGGCGGGTTTTGAGCGATTGCAAAGTTTGCCCGAGTaGGCTGAGCGTCTCGGCGGCCGGTGTCCGGGACAG +
Preference number: 6 (lower is better)
Translates to: QAGFERLQSLPE*AERLGGRCPGQ
Trigger: CTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 90 bp GAGGTTCTCCAGGCGGGTTTTGAGCGATTGCAAAGTTTGCCCGAGTaGGCTGAGCGTCTCGGCGGCCGGTGTCCGGGACAGGTCGCCCAT +
Preference number: 6 (lower is better)
Translates to: EVLQAGFERLQSLPE*AERLGGRCPGQVAH
Trigger: ATGGGCGACCTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 90 bp TCGATGTGGGATTCAGCCCAGGCGATGACATTGCCGGACAGAGCCTaGGTGCTGCAGGTGGCCAGGTTGTACACCTCCCCGGGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: SMWDSAQAMTLPDRA*VLQVARLYTSPGVS
Trigger: GCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAGCACCAAGGCTCTGTCCGGCAATGTCATCGCCTGGGCTGAATCCCACATCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CAA 90 bp GTACTGCTCGAGGTTCTCCAGGCGGGTTTTGAGCGATTGCAAAGTTaGCCCGAGTTGGCTGAGCGTCTCGGCGGCCGGTGTCCGGGACAG +
Preference number: 6 (lower is better)
Translates to: VLLEVLQAGFERLQS*PELAERLGGRCPGQ
Trigger: CTGTCCCGGACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 90 bp GAGGCGGCTGTACTGCTCGAGGTTCTCCAGGCGGGTTTTGAGCGATaGCAAAGTTTGCCCGAGTTGGCTGAGCGTCTCGGCGGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: EAAVLLEVLQAGFER*QSLPELAERLGGRC
Trigger: ACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTACAGCCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 90 bp TTGGTGCTGCAGGTGGCCAGGTTGTACACCTCCCCGGGGGTCAGCTaGCGGTCCCAGATGTTGAAGTGGGCCAGCTCACCCACAAATGCC +
Preference number: 6 (lower is better)
Translates to: LVLQVARLYTSPGVS*RSQMLKWASSPTNA
Trigger: GGCATTTGTGGGTGAGCTGGCCCACTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAGCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CAA 90 bp GCGATGACATTGCCGGACAGAGCCTTGGTGCTGCAGGTGGCCAGGTaGTACACCTCCCCGGGGGTCAGCTTGCGGTCCCAGATGTTGAAG +
Preference number: 6 (lower is better)
Translates to: AMTLPDRALVLQVAR*YTSPGVSLRSQMLK
Trigger: CTTCAACATCTGGGACCGCAAGCTGACCCCCGGGGAGGTGTACAACCTGGCCACCTGCAGCACCAAGGCTCTGTCCGGCAATGTCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CAA 72 bp GATTCAGCCCAGGCGATGACATTGCCGGACAGAGCCTaGGTGCTGCAGGTGGCCAGGTTGTACACCTCCCCG +
Preference number: 6 (lower is better)
Translates to: DSAQAMTLPDRA*VLQVARLYTSP
Trigger: CGGGGAGGTGTACAACCTGGCCACCTGCAGCACCAAGGCTCTGTCCGGCAATGTCATCGCCTGGGCTGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS GCA 72 bp AGGTTCTCCAGGCGGGTTTTGAGCGATTGCAAAGTTTaGCCGAGTTGGCTGAGCGTCTCGGCGGCCGGTGTC +
Preference number: 6 (lower is better)
Translates to: RFSRRVLSDCKV*PSWLSVSAAGV
Trigger: GACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 72 bp TTGCCCTCCTCCAGGGTGTTCACCCGGGACAGCACCTaGCTCTCCAGCTCATCGATCTTGCTCTGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: LPSSRVFTRDST*LSSSSILLCSR
Trigger: TCTGCTGCAGAGCAAGATCGATGAGCTGGAGAGGCAGGTGCTGTCCCGGGTGAACACCCTGGAGGAGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306773.5
ENST00000571100.1
ENST00000575212.1
CDS GCA 72 bp CCGCCAAGCCAAGTCAACCCAAGGAGCAGGGGTGGCTaGAGAGGAGGAACGAGGCTAGCTACCCTGAGAGTA +
Preference number: 6 (lower is better)
Translates to: PPSQVNPRSRGG*RGGTRLATLRV
Trigger: TACTCTCAGGGTAGCTAGCCTCGTTCCTCCTCTGCAGCCACCCCTGCTCCTTGGGTTGACTTGGCTTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 72 bp CGCCACCCCGAGGAACATGCAAACGGAGAAGATCCCTaGAGATCCAAGGATGCCACAACCCGACGGGCGCAA +
Preference number: 6 (lower is better)
Translates to: RHPEEHANGEDP*RSKDATTRRAQ
Trigger: TTGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGTTCCTCGGGGTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS CCA 72 bp TCAACACTGGGCTGCGTGGTGGGCATGAGAAGGGAATaGGGACAGCCGCCAAGCCAAGTCAACCCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: STLGCVVGMRRE*GQPPSQVNPRS
Trigger: GCTCCTTGGGTTGACTTGGCTTGGCGGCTGTCCCCATTCCCTTCTCATGCCCACCACGCAGCCCAGTGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS CAA 72 bp GAGGTTCTCCAGGCGGGTTTTGAGCGATTGCAAAGTTaGCCCGAGTTGGCTGAGCGTCTCGGCGGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: EVLQAGFERLQS*PELAERLGGRC
Trigger: ACACCGGCCGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS TCA 72 bp CTCCGTAGATCTCGATGTGGGATTCAGCCCAGGCGATaGCATTGCCGGACAGAGCCTTGGTGCTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LRRSRCGIQPRR*HCRTEPWCCRW
Trigger: CCACCTGCAGCACCAAGGCTCTGTCCGGCAATGTCATCGCCTGGGCTGAATCCCACATCGAGATCTACGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306773.5
ENST00000535681.1
CDS CAA 90 bp CTCTCCAGCTCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTaGGTCTGGCTGGAGGAATTGAGGCGGCTGTACTGCTGCGGGGTG +
Preference number: 6 (lower is better)
Translates to: LSSSSILLCSRSLRL*VWLEELRRLYCCGV
Trigger: CACCCCGCAGCAGTACAGCCGCCTCAATTCCTCCAGCCAGACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGAGCTGGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571100.1
CDS CAA 90 bp AGTCCTGACATCTGCACCTGCGTGAAGTGCTTATCGGTGTCTGAGTaGAGTTCGGTCCCCACCAAGCTCTGTGATGCGTGGCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SPDICTCVKCLSVSE*SSVPTKLCDAWPGQ
Trigger: CTGCCCTGGCCACGCATCACAGAGCTTGGTGGGGACCGAACTCAACTCAGACACCGATAAGCACTTCACGCAGGTGCAGATGTCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 72 bp TACTGCTCGAGGTTCTCCAGGCGGGTTTTGAGCGATTaGAAAGTTTGCCCGAGTTGGCTGAGCGTCTCGGCG +
Preference number: 6 (lower is better)
Translates to: YCSRFSRRVLSD*KVCPSWLSVSA
Trigger: CGCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS GCA 72 bp ACCCGACGGGCGCAACTTCTGCCTTGTTCAAGACGTTaGAGCACCCACTTCAGCTGTGAATGGGGCATGCCT +
Preference number: 6 (lower is better)
Translates to: TRRAQLLPCSRR*STHFSCEWGMP
Trigger: AGGCATGCCCCATTCACAGCTGAAGTGGGTGCTGCAACGTCTTGAACAAGGCAGAAGTTGCGCCCGTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS CAA 72 bp GTACTGCTCGAGGTTCTCCAGGCGGGTTTTGAGCGATaGCAAAGTTTGCCCGAGTTGGCTGAGCGTCTCGGC +
Preference number: 6 (lower is better)
Translates to: VLLEVLQAGFER*QSLPELAERLG
Trigger: GCCGAGACGCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 72 bp AGGCGGCTGTACTGCTCGAGGTTCTCCAGGCGGGTTTaGAGCGATTGCAAAGTTTGCCCGAGTTGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RRLYCSRFSRRV*SDCKVCPSWLS
Trigger: GCTCAGCCAACTCGGGCAAACTTTGCAATCGCTCAAAACCCGCCTGGAGAACCTCGAGCAGTACAGCCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS CAA 90 bp CTCTCCAGCTCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTaGGTCTGGCTGGAGGAATTGAGGCGGCTGTACTGCTCGAGGTTC +
Preference number: 6 (lower is better)
Translates to: LSSSSILLCSRSLRL*VWLEELRRLYCSRF
Trigger: GAACCTCGAGCAGTACAGCCGCCTCAATTCCTCCAGCCAGACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGAGCTGGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306773.5
CDS TCA 72 bp AAGGTGACTGCTCTAGGATGCCGCCACACTCTCAGGTaGGTAAGTGTCCTCACAGCTCAGGTTCCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: KVTALGCRHTLR*VSVLTAQVPGL
Trigger: CAGGCCTGGAACCTGAGCTGTGAGGACACTTACTCACCTGAGAGTGTGGCGGCATCCTAGAGCAGTCACCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 72 bp CTGGAACTTGTCTCCAGGGCGGTTGTCTTTCTGACCTaGGGAAGACACAGTCCTGACATCTGCACCTGCGTG +
Preference number: 6 (lower is better)
Translates to: LELVSRAVVFLT*GRHSPDICTCV
Trigger: CACGCAGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAGAAAGACAACCGCCCTGGAGACAAGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS TCA 72 bp GTGAGCTGGAACTTGTCTCCAGGGCGGTTGTCTTTCTaGCCTGCGGAAGACACAGTCCTGACATCTGCACCT +
Preference number: 6 (lower is better)
Translates to: VSWNLSPGRLSF*PAEDTVLTSAP
Trigger: AGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAGAAAGACAACCGCCCTGGAGACAAGTTCCAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS GCA 72 bp ACATGCAAACGGAGAAGATCCCTGCAGATCCAAGGATaGCACAACCCGACGGGCGCAACTTCTGCCTTGTTC +
Preference number: 6 (lower is better)
Translates to: TCKRRRSLQIQG*HNPTGATSALF
Trigger: GAACAAGGCAGAAGTTGCGCCCGTCGGGTTGTGGCATCCTTGGATCTGCAGGGATCTTCTCCGTTTGCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1
CDS CAA 72 bp TCATCGATCTTGCTCTGCAGCAGATCCTTGAGGCTGTaGGTCTGGCTGGAGGAATTGAGGCGGCTGTACTGC +
Preference number: 6 (lower is better)
Translates to: SSILLCSRSLRL*VWLEELRRLYC
Trigger: GCAGTACAGCCGCCTCAATTCCTCCAGCCAGACCAACAGCCTCAAGGATCTGCTGCAGAGCAAGATCGATGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306773.5
ENST00000571100.1
ENST00000575212.1
CDS GCA 72 bp GTCTTTCTGACCTGCGGAAGACACAGTCCTGACATCTaGACCTGCGTGAAGTGCTTATCGGTGTCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: VFLTCGRHSPDI*TCVKCLSVSEL
Trigger: CAACTCAGACACCGATAAGCACTTCACGCAGGTGCAGATGTCAGGACTGTGTCTTCCGCAGGTCAGAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535681.1