Pregenerated sensors for NPTN-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000281183Ensembl transcript IDs: ENST00000628401.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCACTGGACAGCCAGCTCTGTGGGGCAGGATACAGCACCACAGGTaGACAAACACAGGCCCCAGAACAGCTGGACTACAGCTGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: STGQPALWGRIQHHR*TNTGPRTAGLQLAT Trigger: GGTTGCCAGCTGTAGTCCAGCTGTTCTGGGGCCTGTGTTTGTGCACCTGTGGTGCTGTATCCTGCCCCACAGAGCTGGCTGTCCAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 90 bp | ACTCCCAGGTTGCAGGAAACTAGAGATTCATTTGCAGAGGCCGTCTaGTCCCAGCCAACGTCCTTCCCACGCCTCTGCCCAGCTCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: TPRLQETRDSFAEAV*SQPTSFPRLCPAHC Trigger: GCAGTGAGCTGGGCAGAGGCGTGGGAAGGACGTTGGCTGGGAGCAGACGGCCTCTGCAAATGAATCTCTAGTTTCCTGCAACCTGGGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS TCA 90 bp | TGCTCCCAGCCAACGTCCTTCCCACGCCTCTGCCCAGCTCACTGCTaGGTGCACATCTGGAGGGAGTCACCAGATATTGTCAGTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CSQPTSFPRLCPAHC*VHIWRESPDIVSVI Trigger: GATGACACTGACAATATCTGGTGACTCCCTCCAGATGTGCACTCAGCAGTGAGCTGGGCAGAGGCGTGGGAAGGACGTTGGCTGGGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 90 bp | CCTCATAAGCGCGGTGACTTCTTAGGGCAAAGACTAGACCTCTGCTaGGAACACGCTAGGCTGCTGCATCACTCTCACCAGTGGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PHKRGDFLGQRLDLC*EHARLLHHSHQWQP Trigger: TGGCTGCCACTGGTGAGAGTGATGCAGCAGCCTAGCGTGTTCCCAGCAGAGGTCTAGTCTTTGCCCTAAGAAGTCACCGCGCTTATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 90 bp | CAACCTCATAAGCGCGGTGACTTCTTAGGGCAAAGACTAGACCTCTaGTGGGAACACGCTAGGCTGCTGCATCACTCTCACCAGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QPHKRGDFLGQRLDL*WEHARLLHHSHQWQ Trigger: CTGCCACTGGTGAGAGTGATGCAGCAGCCTAGCGTGTTCCCAGCAGAGGTCTAGTCTTTGCCCTAAGAAGTCACCGCGCTTATGAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 90 bp | AGCACCAGATGTCACTTTGTATTCTCCACTGGACAGCCAGCTCTGTaGGGCAGGATACAGCACCACAGGTGCACAAACACAGGCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STRCHFVFSTGQPAL*GRIQHHRCTNTGPR Trigger: TCTGGGGCCTGTGTTTGTGCACCTGTGGTGCTGTATCCTGCCCCACAGAGCTGGCTGTCCAGTGGAGAATACAAAGTGACATCTGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 90 bp | GTTGCTCTCAAACATGTCCTCCCAGAGAGTCTAAAGCCACTGGCATaGCTCTGGGGCCACATTCTTTCTGAGGGAGCACCAGATGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VALKHVLPESLKPLA*LWGHILSEGAPDVT Trigger: AGTGACATCTGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCATGCCAGTGGCTTTAGACTCTCTGGGAGGACATGTTTGAGAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS TCA 90 bp | AGAGAGTCTAAAGCCACTGGCATGCCTCTGGGGCCACATTCTTTCTaGGGGAGCACCAGATGTCACTTTGTATTCTCCACTGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RESKATGMPLGPHSF*GSTRCHFVFSTGQP Trigger: TGGCTGTCCAGTGGAGAATACAAAGTGACATCTGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCATGCCAGTGGCTTTAGACTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 90 bp | CTCAAACATGTCCTCCCAGAGAGTCTAAAGCCACTGGCATGCCTCTaGGGCCACATTCTTTCTGAGGGAGCACCAGATGTCACTTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LKHVLPESLKPLACL*GHILSEGAPDVTLY Trigger: ATACAAAGTGACATCTGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCATGCCAGTGGCTTTAGACTCTCTGGGAGGACATGTTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 90 bp | GGCAAACATTGCCATCATTCCAGCATCTCAGATTTTTCACCCCAATaGAACAACAACGAAGTAAACGCTGCTTTCATTACAATACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKHCHHSSISDFSPQ*NNNEVNAAFITILS Trigger: GGAGAGTATTGTAATGAAAGCAGCGTTTACTTCGTTGTTGTTGCATTGGGGTGAAAAATCTGAGATGCTGGAATGATGGCAATGTTTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 90 bp | AGGAGTGTACGTATATATCTATATGAAAATTTGGGGAGAAGCACATaGGAAGGAAGCAGACAGGTAAGTTTGTCCTTCCTATGGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSVRIYLYENLGRST*EGSRQVSLSFLWSA Trigger: TGCACTCCATAGGAAGGACAAACTTACCTGTCTGCTTCCTTCCCATGTGCTTCTCCCCAAATTTTCATATAGATATATACGTACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 72 bp | CAGCCAGCTCTGTGGGGCAGGATACAGCACCACAGGTaGACAAACACAGGCCCCAGAACAGCTGGACTACAG | + |
|
Preference number: 6 (lower is better) Translates to: QPALWGRIQHHR*TNTGPRTAGLQ Trigger: CTGTAGTCCAGCTGTTCTGGGGCCTGTGTTTGTGCACCTGTGGTGCTGTATCCTGCCCCACAGAGCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS TCA 72 bp | CCAACGTCCTTCCCACGCCTCTGCCCAGCTCACTGCTaGGTGCACATCTGGAGGGAGTCACCAGATATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PTSFPRLCPAHC*VHIWRESPDIV Trigger: GACAATATCTGGTGACTCCCTCCAGATGTGCACTCAGCAGTGAGCTGGGCAGAGGCGTGGGAAGGACGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 72 bp | TTGCAGGAAACTAGAGATTCATTTGCAGAGGCCGTCTaGTCCCAGCCAACGTCCTTCCCACGCCTCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQETRDSFAEAV*SQPTSFPRLCP Trigger: TGGGCAGAGGCGTGGGAAGGACGTTGGCTGGGAGCAGACGGCCTCTGCAAATGAATCTCTAGTTTCCTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 72 bp | GTCCTCCCAGAGAGTCTAAAGCCACTGGCATGCCTCTaGGGCCACATTCTTTCTGAGGGAGCACCAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLPESLKPLACL*GHILSEGAPDV Trigger: GACATCTGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCATGCCAGTGGCTTTAGACTCTCTGGGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 72 bp | CGCGGTGACTTCTTAGGGCAAAGACTAGACCTCTGCTaGGAACACGCTAGGCTGCTGCATCACTCTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGDFLGQRLDLC*EHARLLHHSHQ Trigger: CTGGTGAGAGTGATGCAGCAGCCTAGCGTGTTCCCAGCAGAGGTCTAGTCTTTGCCCTAAGAAGTCACCGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CAA 72 bp | GGGACACTCCCAGGTTGCAGGAAACTAGAGATTCATTaGCAGAGGCCGTCTGCTCCCAGCCAACGTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTLPGCRKLEIH*QRPSAPSQRPS Trigger: GGAAGGACGTTGGCTGGGAGCAGACGGCCTCTGCAAATGAATCTCTAGTTTCCTGCAACCTGGGAGTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CAA 90 bp | TGCCTCTGGGGCCACATTCTTTCTGAGGGAGCACCAGATGTCACTTaGTATTCTCCACTGGACAGCCAGCTCTGTGGGGCAGGATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLWGHILSEGAPDVT*YSPLDSQLCGAGYS Trigger: GCTGTATCCTGCCCCACAGAGCTGGCTGTCCAGTGGAGAATACAAAGTGACATCTGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CAA 90 bp | AAACTCATGGGGACACTCCCAGGTTGCAGGAAACTAGAGATTCATTaGCAGAGGCCGTCTGCTCCCAGCCAACGTCCTTCCCACGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KLMGTLPGCRKLEIH*QRPSAPSQRPSHAS Trigger: AGAGGCGTGGGAAGGACGTTGGCTGGGAGCAGACGGCCTCTGCAAATGAATCTCTAGTTTCCTGCAACCTGGGAGTGTCCCCATGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 72 bp | AAACATGTCCTCCCAGAGAGTCTAAAGCCACTGGCATaGCTCTGGGGCCACATTCTTTCTGAGGGAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: KHVLPESLKPLA*LWGHILSEGAP Trigger: TGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCATGCCAGTGGCTTTAGACTCTCTGGGAGGACATGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CAA 72 bp | GGCCACATTCTTTCTGAGGGAGCACCAGATGTCACTTaGTATTCTCCACTGGACAGCCAGCTCTGTGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GHILSEGAPDVT*YSPLDSQLCGA Trigger: TGCCCCACAGAGCTGGCTGTCCAGTGGAGAATACAAAGTGACATCTGGTGCTCCCTCAGAAAGAATGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CAA 90 bp | GCCCAGCTCACTGCTGAGTGCACATCTGGAGGGAGTCACCAGATATaGTCAGTGTCATCAACAAACCTCCTCACCAGCCACTCACTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: AQLTAECTSGGSHQI*SVSSTNLLTSHSLY Trigger: GTAGAGTGAGTGGCTGGTGAGGAGGTTTGTTGATGACACTGACAATATCTGGTGACTCCCTCCAGATGTGCACTCAGCAGTGAGCTGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS TCA 72 bp | AAAGCCACTGGCATGCCTCTGGGGCCACATTCTTTCTaGGGGAGCACCAGATGTCACTTTGTATTCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: KATGMPLGPHSF*GSTRCHFVFST Trigger: AGTGGAGAATACAAAGTGACATCTGGTGCTCCCTCAGAAAGAATGTGGCCCCAGAGGCATGCCAGTGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CAA 90 bp | CTGGCCCACACTGGCTGTCAGGAAGGGAAGGAGAGAAGGCAAACATaGCCATCATTCCAGCATCTCAGATTTTTCACCCCAATGCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: LAHTGCQEGKERRQT*PSFQHLRFFTPMQQ Trigger: TTGTTGCATTGGGGTGAAAAATCTGAGATGCTGGAATGATGGCAATGTTTGCCTTCTCTCCTTCCCTTCCTGACAGCCAGTGTGGGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 72 bp | AGGAAGCAGACAGGTAAGTTTGTCCTTCCTATGGAGTaGACAGGGGTTGAGGGGAACTGGCTAAAGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RKQTGKFVLPME*TGVEGNWLKKE Trigger: TTCCTTCTTTAGCCAGTTCCCCTCAACCCCTGTGCACTCCATAGGAAGGACAAACTTACCTGTCTGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS GCA 72 bp | AGTAGGAAAGTAAAACTCATGGGGACACTCCCAGGTTaGAGGAAACTAGAGATTCATTTGCAGAGGCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SRKVKLMGTLPG*RKLEIHLQRPS Trigger: AGACGGCCTCTGCAAATGAATCTCTAGTTTCCTGCAACCTGGGAGTGTCCCCATGAGTTTTACTTTCCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||
| CDS CCA 72 bp | CGTATATATCTATATGAAAATTTGGGGAGAAGCACATaGGAAGGAAGCAGACAGGTAAGTTTGTCCTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: RIYLYENLGRST*EGSRQVSLSFL Trigger: TAGGAAGGACAAACTTACCTGTCTGCTTCCTTCCCATGTGCTTCTCCCCAAATTTTCATATAGATATATACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628401.1 |
||