RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPSR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000187258

Ensembl transcript IDs: ENST00000359791.5, ENST00000360581.6, ENST00000381539.3, ENST00000381542.5, ENST00000381544.6, ENST00000381553.7, ENST00000396095.6, ENST00000465305.5, ENST00000531252.5

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGCTCCAAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTaGGTTCAGGTGCTGGCCAGTGGGAAGGAGGGCTGGGAATGGTGG +
Preference number: 1 (lower is better)
Translates to: TGSKPGPWTTNACVH*VQVLASGKEGWEWW
Trigger: CCACCATTCCCAGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGAGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CCA 90 bp TGTCAGAGGGATGAAGTACACCAGGAAGGCCACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCAGCACTGCAC +
Preference number: 1 (lower is better)
Translates to: CQRDEVHQEGHDGHV*GPVGVVRPQGPALH
Trigger: GTGCAGTGCTGGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACTTCATCCCTCTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR TCA 90 bp AGAACATTTGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTaGAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAG +
Preference number: 1 (lower is better)
Translates to: RTFVLCISQVMTRVG*SWLGFHARAQAGDK
Trigger: CTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACAAATGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR TCA 90 bp GCTGATGGTGCTCAGCCTAGCACTGGCACTGCCCTAGGGTCTAGATaGATTCTGGCTTGGACAGAATCTGCATCTCATGCCTCTCAGTTC +
Preference number: 1 (lower is better)
Translates to: ADGAQPSTGTALGSR*ILAWTESASHASQF
Trigger: GAACTGAGAGGCATGAGATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACCCTAGGGCAGTGCCAGTGCTAGGCTGAGCACCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CCA 90 bp GAACTCTTGCTCCTTTTACCTTCTCTGTATTTTTCACTGGTGCCTTaGATGTTTACCCTGGCCACTGCAGCCCAGCTCAAGCAGGTGGGC +
Preference number: 1 (lower is better)
Translates to: ELLLLLPSLYFSLVP*MFTLATAAQLKQVG
Trigger: GCCCACCTGCTTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGGTAAAAGGAGCAAGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR CCA 90 bp ATGGTGGGGAAGGAAGGCGTTTCCTTCCTGGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCATGCAGTCAT +
Preference number: 1 (lower is better)
Translates to: MVGKEGVSFLAGMNN*GVRVGQYLSSACSH
Trigger: ATGACTGCATGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGGAAACGCCTTCCTTCCCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR GCA 90 bp GCTGCTGAAGACACAGTAGATGAGGGGGTTGATGGCACTATTCAATaGTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCCTG +
Preference number: 1 (lower is better)
Translates to: AAEDTVDEGVDGTIQ*WQVLNDHRGIETLL
Trigger: CAGGAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAACCCCCTCATCTACTGTGTCTTCAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR GCA 90 bp CTTCAGAACTCTTGCTCCTTTTACCTTCTCTGTATTTTTCACTGGTaGCTTGGATGTTTACCCTGGCCACTGCAGCCCAGCTCAAGCAGG +
Preference number: 1 (lower is better)
Translates to: LQNSCSFYLLCIFHW*LGCLPWPLQPSSSR
Trigger: CCTGCTTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGGTAAAAGGAGCAAGAGTTCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR CCA 90 bp GCTGAAGACACAGTAGATGAGGGGGTTGATGGCACTATTCAATGCTaGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: AEDTVDEGVDGTIQC*QVLNDHRGIETLLG
Trigger: ACCCAGGAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAACCCCCTCATCTACTGTGTCTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CCA 90 bp CATCTTCAGAACTCTTGCTCCTTTTACCTTCTCTGTATTTTTCACTaGTGCCTTGGATGTTTACCCTGGCCACTGCAGCCCAGCTCAAGC +
Preference number: 1 (lower is better)
Translates to: HLQNSCSFYLLCIFH*CLGCLPWPLQPSSS
Trigger: GCTTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGGTAAAAGGAGCAAGAGTTCTGAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR CCA 90 bp CAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCCTGGGTGTCTaGAAGGAGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGG +
Preference number: 1 (lower is better)
Translates to: QVLNDHRGIETLLGV*KEVEIVQNVKQEVW
Trigger: CCATACTTCCTGTTTGACATTTTGGACAATTTCAACCTCCTTCCAGACACCCAGGAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CCA 90 bp AGCTGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTaGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAA +
Preference number: 1 (lower is better)
Translates to: SCGILIQGYLPLSIC*MILITSTSTVIGVK
Trigger: TTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR CCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGACTGGGTTCAGGTGCTaGCCAGTGGGAAGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTTGFRC*PVGRRA
Trigger: AGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGT...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGGAGGGCTGGGAATGGTaGGGAAGGAAGGCGTTTCCT +
Preference number: 2 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTEGWEW*GRKAFP
Trigger: AGGAAACGCCTTCCTTCCCCACCATTCCCAGCCCTC...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR TCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCACCTTCCTGGCTGGCATaGATAACTGGGGAGTTCGTG +
Preference number: 2 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPPSWLA*ITGEFV
Trigger: CACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGG...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR TCA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAGCCCTAGGGTCTAGATaGATTCTGGCTTGGACAGAA +
Preference number: 2 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTALGSR*ILAWTE
Trigger: TTCTGTCCAAGCCAGAATTCATCTAGACCCTAGGGC...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGCACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTC +
Preference number: 2 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTHDGHV*GPVGVV
Trigger: GACGACTCCTACTGGACCCCATACATGACCATCGTG...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR GCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGCTCGGTTATAGCTGCTaGACAGTTTCCCATCTGAGC +
Preference number: 2 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTLGYSC*TVSHLS
Trigger: GCTCAGATGGGAAACTGTGCAGCAGCTATAACCGAG...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCTGGGGAGTTCGTGTTaGCCAATACTTAAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: PGPWTTNACVHWVQVLASLGSSC*PILKQC
Trigger: GCACTGCTTAAGTATTGGCCAACACGAACTCCCCAG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTAGMNN*GVRVGQ
Trigger: TTGGCCAACACGAACTCCCCAGTTATTCATGCCAGC...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCACTGCACTTCACCGTTaGACAGTGTCCTCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: KPGPWTTNACVHWVQVLATALHR*TVSSSQ
Trigger: TTGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGT...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396095.6
3UTR-3UTR CCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAACCAGGAAGGCCACGATaGTCATGTATGGGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: LSRNVILESCDLCSLQGKPGRPR*SCMGSS
Trigger: ACTGGACCCCATACATGACCATCGTGGCCTTCCTGG...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCTGGGGAGTTCGTGTTaGCCAATACTTAAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVLGSSC*PILKQC
Trigger: GCACTGCTTAAGTATTGGCCAACACGAACTCCCCAG...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CAA 90 bp AGAACTCTTGCTCCTTTTACCTTCTCTGTATTTTTCACTGGTGCCTaGGATGTTTACCCTGGCCACTGCAGCCCAGCTCAAGCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RTLAPFTFSVFFTGA*DVYPGHCSPAQAGG
Trigger: CCCACCTGCTTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGGTAAAAGGAGCAAGAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR TCA 90 bp TTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAGCACAGTTTCCCATCTaGGCAGTTGGAAATCACTGT +
Preference number: 2 (lower is better)
Translates to: FSPGTSFWNPVIFAPCRGAQFPI*AVGNHC
Trigger: ACAGTGATTTCCAACTGCTCAGATGGGAAACTGTGC...TCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR TCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCTTGATTTTTGCCTTTaGGATGAGTCCTCGGTTATA +
Preference number: 2 (lower is better)
Translates to: PGPWTTNACVHWVQVLASLDFCL*DESSVI
Trigger: TATAACCGAGGACTCATCTCAAAGGCAAAAATCAAG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR TCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTTGTCTGGAAGGAGGTTaGAATTGTCCAAAATGTCAA +
Preference number: 2 (lower is better)
Translates to: PGPWTTNACVHWVQVLASCLEGG*NCPKCQ
Trigger: TTGACATTTTGGACAATTTCAACCTCCTTCCAGACA...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR GCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCACCAATACTTAAGCAGTaGATGCAGTCATTAGAACAT +
Preference number: 2 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPPILKQ*MQSLEH
Trigger: ATGTTCTAATGACTGCATGCACTGCTTAAGTATTGG...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAATCCCATCTGAGCAGTTaGAAATCACTGTTTCGTAGG +
Preference number: 2 (lower is better)
Translates to: LSRNVILESCDLCSLQGKSHLSS*KSLFRR
Trigger: CCTACGAAACAGTGATTTCCAACTGCTCAGATGGGA...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp AGGAGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGGAGGGCTGGGAATGGTaGGGAAGGAAGGCGTTTCCT +
Preference number: 2 (lower is better)
Translates to: RRLKLSKMSNRKYGLQQQEGWEW*GRKAFP
Trigger: AGGAAACGCCTTCCTTCCCCACCATTCCCAGCCCTC...CTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp CCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAAGAGAGGTCTAGATGAATTCTaGCTTGGACAGAATCTGCAT +
Preference number: 2 (lower is better)
Translates to: PGTSFWNPVIFAPCRGKRGLDEF*LGQNLH
Trigger: ATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC...TCTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp TGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTAATCTTGGATGTTTACCCTaGCCACTGCAGCCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: WHPHPGIFASKHLLDDPNLGCLP*PLQPSS
Trigger: TGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAG...ATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR TCA 90 bp CAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACCTTCCTGGCTGGCATaGATAACTGGGGAGTTCGTG +
Preference number: 2 (lower is better)
Translates to: QEVWTPTADEGKNDDDAIPSWLA*ITGEFV
Trigger: CACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGG...TATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR GCA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCAATACTTAAGCAGTaGATGCAGTCATTAGAACAT +
Preference number: 2 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVPILKQ*MQSLEH
Trigger: ATGTTCTAATGACTGCATGCACTGCTTAAGTATTGG...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp GTTGATGGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAATCCAAGCCAGGACCCTaGACCACTAATGCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: VDGTIQCWQVLNDHRGIESKPGP*TTNACV
Trigger: AACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGA...TTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp GGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCGGTCTAGATGAATTCTaGCTTGGACAGAATCTGCAT +
Preference number: 2 (lower is better)
Translates to: GTIQCWQVLNDHRGIETLGLDEF*LGQNLH
Trigger: ATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC...GAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp GGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTAATTTTTTCACTGGTGCCTTaGATGTTTACCCTGGCCACT +
Preference number: 2 (lower is better)
Translates to: GILIQGYLPLSICWMILIFSLVP*MFTLAT
Trigger: AGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAA...AATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR GCA 90 bp TGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTATGTATTTTTCACTGGTaGCTTGGATGTTTACCCTGG +
Preference number: 2 (lower is better)
Translates to: CGILIQGYLPLSICWMILCIFHW*LGCLPW
Trigger: CCAGGGTAAACATCCAAGGCACCAGTGAAAAATACA...TAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR CCA 90 bp GAAACTTTCCCCCATCCCAGGTTCCATCTTCAGAACTCTTGCTCCTTTTACCTTCTCTGTATTTTTCACTaGTGCCTTGGATGTTTACCC +
Preference number: 2 (lower is better)
Translates to: ETFPHPRFHLQNSCSFYLLCIFH*CLGCLP
Trigger: GGGTAAACATCCAAGGCACCAGTGAAAAATACAGAG...AAGGTAAAAGGAGCAAGAGTTCTGAAGATGGAACCTGGGATGGGGGAAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR GCA 90 bp GTTGATGGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAAGAACATTTGTCTTGTaGATCTCCCAGGTAATGACG +
Preference number: 2 (lower is better)
Translates to: VDGTIQCWQVLNDHRGIERTFVL*ISQVMT
Trigger: CGTCATTACCTGGGAGATGCACAAGACAAATGTTCT...TTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CCA 90 bp AGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGTCCCATCTGAGCAGTTaGAAATCACTGTTTCGTAGG +
Preference number: 2 (lower is better)
Translates to: RLKLSKMSNRKYGLQQQMSHLSS*KSLFRR
Trigger: CCTACGAAACAGTGATTTCCAACTGCTCAGATGGGA...CATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CAA 90 bp TACCTCTACTTCTACGGTTATAGGAGTGAAAAATTGGAGTTCTTGTaGGTAGGAAAGATTGAAGAAACTTTCCCCCATCCCAGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: YLYFYGYRSEKLEFL*VGKIEETFPHPRFH
Trigger: ATGGAACCTGGGATGGGGGAAAGTTTCTTCAATCTTTCCTACCAACAAGAACTCCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR TCA 90 bp CTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATTGGAGGTTGGTAGGAAAGATTaGAGAAACTTTCCCCCATCC +
Preference number: 2 (lower is better)
Translates to: LDDPNYLYFYGYRSEKLEVGRKD*RNFPPS
Trigger: GGATGGGGGAAAGTTTCTTCAATCTTTCCTACCAAC...CTCCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR GCA 90 bp AGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGAGAACATTTGTCTTGTaGATCTCCCAGGTAATGACG +
Preference number: 2 (lower is better)
Translates to: RLKLSKMSNRKYGLQQQMRTFVL*ISQVMT
Trigger: CGTCATTACCTGGGAGATGCACAAGACAAATGTTCT...CATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CAA 90 bp GATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATaGGAGTTCTTGTTGGTAGGAAAGATTGAAGAAACTTTCCCCCAT +
Preference number: 2 (lower is better)
Translates to: DDPNYLYFYGYRSEK*EFLLVGKIEETFPH
Trigger: ATGGGGGAAAGTTTCTTCAATCTTTCCTACCAACAAGAACTCCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR CCA 72 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTaGGTTCAGGTGCTGGCCAGTGGGAAGGAGGGCTGG +
Preference number: 3 (lower is better)
Translates to: KPGPWTTNACVH*VQVLASGKEGW
Trigger: CCAGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCACACTGCACTTCACCGTaGGACAGTGTCCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPHCTSP*DSVLFP
Trigger: TGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGTG...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396095.6
3UTR TCA 72 bp GTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTaGAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCA +
Preference number: 3 (lower is better)
Translates to: VLCISQVMTRVG*SWLGFHARAQA
Trigger: TGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CCA 72 bp GATGAAGTACACCAGGAAGGCCACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: DEVHQEGHDGHV*GPVGVVRPQGP
Trigger: TGGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACTTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCAGAGGGTGGGGTGAAGTaGGCTCGGGTTCCATGCACG +
Preference number: 3 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSAEGGVK*ARVPCT
Trigger: CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTC...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR TCA 72 bp GCTCAGCCTAGCACTGGCACTGCCCTAGGGTCTAGATaGATTCTGGCTTGGACAGAATCTGCATCTCATGCC +
Preference number: 3 (lower is better)
Translates to: AQPSTGTALGSR*ILAWTESASHA
Trigger: GGCATGAGATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACCCTAGGGCAGTGCCAGTGCTAGGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCAGTCATTAGAACATTaGTCTTGTGCATCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PGPWTTNACVHWVQVLASQSLEH*SCASPR
Trigger: CCTGGGAGATGCACAAGACAAATGTTCTAATGACTG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR TCA 72 bp CTCAGTTCTCTCCCGGAACGTCATTCTGGAATCCTGTaGTCTTTGCTCCCTGCAGGGGAAAGAGATGGAGCT +
Preference number: 3 (lower is better)
Translates to: LSSLPERHSGIL*SLLPAGERDGA
Trigger: AGCTCCATCTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CCA 72 bp TCTCATGCCTCTCAGTTCTCTCCCGGAACGTCATTCTaGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAAG +
Preference number: 3 (lower is better)
Translates to: SHASQFSPGTSF*NPVIFAPCRGK
Trigger: CTTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAACTGAGAGGCATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp GGAAGGAGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGGAGGGTGGGGTGAAGTaGGCTCGGGTTCCATGCACG +
Preference number: 3 (lower is better)
Translates to: GRRLKLSKMSNRKYGLQQEGGVK*ARVPCT
Trigger: CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTC...CTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 3 (lower is better)
Translates to: PGPWTTNACVHWVQVLASIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 3 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CCA 72 bp AAGGAAGGCGTTTCCTTCCTGGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCA +
Preference number: 3 (lower is better)
Translates to: KEGVSFLAGMNN*GVRVGQYLSSA
Trigger: TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGGAAACGCCTTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CCA 72 bp CTCCTTTTACCTTCTCTGTATTTTTCACTGGTGCCTTaGATGTTTACCCTGGCCACTGCAGCCCAGCTCAAG +
Preference number: 3 (lower is better)
Translates to: LLLPSLYFSLVP*MFTLATAAQLK
Trigger: CTTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGGTAAAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR CAA 90 bp TTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 3 (lower is better)
Translates to: FSPGTSFWNPVIFAPCRGIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...TCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR-3UTR CAA 90 bp GAAACTTTCCCCCATCCCAGGTTCCATCTTCAGAACTCTTGCTCCTTTTACCTTTTTTTCACTGGTGCCTaGGATGTTTACCCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: ETFPHPRFHLQNSCSFYLFFTGA*DVYPGH
Trigger: GTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAA...AAGGTAAAAGGAGCAAGAGTTCTGAAGATGGAACCTGGGATGGGGGAAAGTTTC
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR GCA 72 bp GACACAGTAGATGAGGGGGTTGATGGCACTATTCAATaGTGGCAGGTTCTGAATGATCACAGAGGCATAGAA +
Preference number: 3 (lower is better)
Translates to: DTVDEGVDGTIQ*WQVLNDHRGIE
Trigger: TTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAACCCCCTCATCTACTGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CCA 72 bp ACAGTAGATGAGGGGGTTGATGGCACTATTCAATGCTaGCAGGTTCTGAATGATCACAGAGGCATAGAAACG +
Preference number: 3 (lower is better)
Translates to: TVDEGVDGTIQC*QVLNDHRGIET
Trigger: CGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAACCCCCTCATCTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR GCA 72 bp GGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTaGTGGATGATCCTAATTACCTCTACTTCTACGGTT +
Preference number: 3 (lower is better)
Translates to: GILIQGYLPLSI*WMILITSTSTV
Trigger: AACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR-3UTR CAA 90 bp CAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACAGTCATTAGAACATTaGTCTTGTGCATCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: QEVWTPTADEGKNDDDAIQSLEH*SCASPR
Trigger: CCTGGGAGATGCACAAGACAAATGTTCTAATGACTG...TATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CCA 72 bp ATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTaGATGATCCTAATTACCTCTACTTCTACGGTTATA +
Preference number: 3 (lower is better)
Translates to: ILIQGYLPLSIC*MILITSTSTVI
Trigger: TATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGGCACAGAGCCCTCCCTaGGCCCACCTCACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRAQSPP*AHLTEE
Trigger: CTCTTCAGTGAGGTGGGCTCAGGGAGGGCTCTGTGC...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360581.6
CDS-3UTR TCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGCAGCTGCAGCTCTGCTaGACGGAGGCACAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRQLQLC*TEAQSP
Trigger: AGGGCTCTGTGCCTCCGTTCAGCAGAGCTGCAGCTG...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCGCTCCTGCAGCTGAGTaGGGGAGTCCAGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTAPAAE*GSPACL
Trigger: GAGGCAAGCTGGACTCCCTCACTCAGCTGCAGGAGC...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCATGGCTCAGGCGGGGTTaGGCCTCACTGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPWLRRG*ASLSLL
Trigger: GAGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCA...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACATCTGCCCGGTCCCACTaGAATCGAAGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTSARSH*NRSCPL
Trigger: CAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGA...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCTCTGCCCGGTCCCACTaGAATCGAAGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RPRWSCMGSSRSRQATGPSARSH*NRSCPL
Trigger: CAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGA...GGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCTCAGGTGCTGGCCAGTaGGAAGGAGGGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RPRWSCMGSSRSRQATGPSGAGQ*EGGLGM
Trigger: CATTCCCAGCCCTCCTTCCCACTGGCCAGCACCTGA...GGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAACTGGGTTCAGGTGCTaGCCAGTGGGAAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTTGFRC*PVGRRA
Trigger: AGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGT...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGCTCCTGCAGCTGAGTaGGGGAGTCCAGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPAPAAE*GSPACL
Trigger: GAGGCAAGCTGGACTCCCTCACTCAGCTGCAGGAGC...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCGCTCCTGCAGCTGAGTaGGGGAGTCCAGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAAPAAE*GSPACL
Trigger: GAGGCAAGCTGGACTCCCTCACTCAGCTGCAGGAGC...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCACCTTGCTCCTGCAGCTaGGTGAGGGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPPCSCS*VRESSL
Trigger: CAAGCTGGACTCCCTCACTCAGCTGCAGGAGCAAGG...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATGGCTCAGGCGGGGTTaGGCCTCACTGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPWLRRG*ASLSLL
Trigger: GAGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp ACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCTGGCTCAGGCGGGGTTaGGCCTCACTGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TPGRPRWSCMGSSRSRQAWLRRG*ASLSLL
Trigger: GAGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCA...GGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTGAGCTGGGCAGCAGCTaGAGCTCTGCTGAACGGAGG +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASELGSS*SSAERR
Trigger: CCTCCGTTCAGCAGAGCTGCAGCTGCTGCCCAGCTC...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCG +
Preference number: 4 (lower is better)
Translates to: RPRWSCMGSSRSRQATGPEESSV*PVPLES
Trigger: CGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTC...GGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCAGCACTGCACCTCTGTGAAGTTGGCTaGCATGGCTCAGGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: GHVWGPVGVVRPQGPALHLCEVG*HGSGGV
Trigger: AACCCCGCCTGAGCCATGCCAGCCAACTTCACAGAG...GTGCAGTGCTGGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCTCAGGTGCTGGCCAGTaGGAAGGAGGGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTSGAGQ*EGGLGM
Trigger: CATTCCCAGCCCTCCTTCCCACTGGCCAGCACCTGA...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCACTGGGTTCAGGTGCTaGCCAGTGGGAAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTTGFRC*PVGRRA
Trigger: AGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGACTGGGTTCAGGTGCTaGCCAGTGGGAAGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRTGFRC*PVGRRA
Trigger: AGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGT...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGCCTTGCTCCTGCAGCTaGGTGAGGGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTPCSCS*VRESSL
Trigger: CAAGCTGGACTCCCTCACTCAGCTGCAGGAGCAAGG...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCATGACGAGGGTGGGGTaGAGTTGGCTCGGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTMTRVG*SWLGFH
Trigger: ATGGAACCCGAGCCAACTTCACCCCACCCTCGTCAT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCG +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTEESSV*PVPLES
Trigger: CGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTC...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCACACAGGGCCCAGCACTaGACTTCACCGTTGGACAGT +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPHRAQH*TSPLDS
Trigger: ACTGTCCAACGGTGAAGTGCAGTGCTGGGCCCTGTG...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTTCTGCCCGGTCCCACTaGAATCGAAGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASSARSH*NRSCPL
Trigger: CAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGA...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGAGGGCTGGGAATGGTaGGGAAGGAAGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSREGWEW*GRKAFP
Trigger: AGGAAACGCCTTCCTTCCCCACCATTCCCAGCCCTC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATCAGGTGCTGGCCAGTaGGAAGGAGGGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPSGAGQ*EGGLGM
Trigger: CATTCCCAGCCCTCCTTCCCACTGGCCAGCACCTGA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAGGTATCTGTCTATGCTaGGGGACACCAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPGICLC*GTPGRR
Trigger: CCTACGTCCTGGTGTCCCTCAGCATAGACAGATACC...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR TCA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACACATTCTGGAATCCTGTaGTCTTTGCTCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTHSGIL*SLLPAG
Trigger: CCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATG...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGATGACGAGGGTGGGGTaGAGTTGGCTCGGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTMTRVG*SWLGFH
Trigger: ATGGAACCCGAGCCAACTTCACCCCACCCTCGTCAT...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCCCTTCCTGGCTGGCATaGATAACTGGGGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTPSWLA*ITGEFV
Trigger: CACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGG...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGCCTTCCTGGCTGGCATaGATAACTGGGGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRPSWLA*ITGEFV
Trigger: CACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGG...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCG +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAEESSV*PVPLES
Trigger: CGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTC...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCG +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASEESSV*PVPLES
Trigger: CGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTC...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCACAGGGCCCAGCACTaGACTTCACCGTTGGACAGT +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAHRAQH*TSPLDS
Trigger: ACTGTCCAACGGTGAAGTGCAGTGCTGGGCCCTGTG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCACAGGGCCCAGCACTaGACTTCACCGTTGGACAGT +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASHRAQH*TSPLDS
Trigger: ACTGTCCAACGGTGAAGTGCAGTGCTGGGCCCTGTG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCTCTGTGAAGTTGGCTaGCATGGCTCAGGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLALCEVG*HGSGGV
Trigger: AACCCCGCCTGAGCCATGCCAGCCAACTTCACAGAG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCACTCTGTGAAGTTGGCTaGCATGGCTCAGGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPLCEVG*HGSGGV
Trigger: AACCCCGCCTGAGCCATGCCAGCCAACTTCACAGAG...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGTTCAGTGCAAGCCACTaGGGAAGAATCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRFSASH*GRIQRL
Trigger: CAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAA...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCTTGCTCCTGCAGCTaGGTGAGGGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVPCSCS*VRESSL
Trigger: CAAGCTGGACTCCCTCACTCAGCTGCAGGAGCAAGG...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTGGTATCTGTCTATGCTaGGGGACACCAGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASGICLC*GTPGRR
Trigger: CCTACGTCCTGGTGTCCCTCAGCATAGACAGATACC...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR TCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTCCAGGCGATCACAATaGGGACCCTGGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRSRRSQ*GPWLAF
Trigger: AAAAGCAAGCCAGGGTCCTCATTGTGATCGCCTGGA...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGGCCCTAGGGTCTAGATaGATTCTGGCTTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRALGSR*ILAWTE
Trigger: TTCTGTCCAAGCCAGAATTCATCTAGACCCTAGGGC...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCCAGGGAGGATCTACGTaGTGCTCTCTCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTQGGST*CSLLGN
Trigger: ATTGCCAAGGAGAGAGCAGCACGTAGATCCTCCCTG...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360581.6
CDS-3UTR GCA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAGTCCTCGGTTATAGCTaGTGCACAGTTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTVLGYS*CTVSHL
Trigger: CAGATGGGAAACTGTGCAGCAGCTATAACCGAGGAC...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAGTGATCTTTGCTCCCTaGAGGGGAAAGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPVIFAP*RGKRWS
Trigger: GCTCCATCTCTTTCCCCTGCAGGGAGCAAAGATCAC...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCGTGATCTTTGCTCCCTaGAGGGGAAAGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTVIFAP*RGKRWS
Trigger: GCTCCATCTCTTTCCCCTGCAGGGAGCAAAGATCAC...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGAGAATCTGCATCTCATaGCTCTCAGTTCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRRICIS*LSVLSR
Trigger: CCGGGAGAGAACTGAGAGGCATGAGATGCAGATTCT...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGATGAGGACCCTGGCTTaGTTTTCTGTGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRMRTLA*FSVMAS
Trigger: GCTGGCCATCACAGAAAAGCAAGCCAGGGTCCTCAT...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381542.5
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGCACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRHDGHV*GPVGVV
Trigger: GACGACTCCTACTGGACCCCATACATGACCATCGTG...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCCAGGAAGGCCACGATaGTCATGTATGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASPGRPR*SCMGSS
Trigger: ACTGGACCCCATACATGACCATCGTGGCCTTCCTGG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCCAGGAAGGCCACGATaGTCATGTATGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAPGRPR*SCMGSS
Trigger: ACTGGACCCCATACATGACCATCGTGGCCTTCCTGG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRAGMNN*GVRVGQ
Trigger: TTGGCCAACACGAACTCCCCAGTTATTCATGCCAGC...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCAATGCCTGTGTTCACTaGGTTCAGGTGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTNACVH*VQVLAS
Trigger: ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTCCAAGCCAGGACCCTaGACCACTAATGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRSKPGP*TTNACV
Trigger: AACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGA...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCCTGGGTGTCTGGCCTTGCTCCTGCAGCTaGGTGAGGGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CWQVLNDHRGIETLLGVWPCSCS*VRESSL
Trigger: CAAGCTGGACTCCCTCACTCAGCTGCAGGAGCAAGG...CCAGACACCCAGGAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATCCAGGCGATCACAATaGGGACCCTGGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPSRRSQ*GPWLAF
Trigger: AAAAGCAAGCCAGGGTCCTCATTGTGATCGCCTGGA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGTCCTCTTCCCAAATATaGTCAGGGTGGGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRSSSQI*SGWEWR
Trigger: TCTCCATTCCCACCCTGATCATATTTGGGAAGAGGA...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGGCACAGTTTCCCATCTaGGCAGTTGGAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRAQFPI*AVGNHC
Trigger: ACAGTGATTTCCAACTGCTCAGATGGGAAACTGTGC...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGCATTCTGGAATCCTGTaGTCTTTGCTCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTHSGIL*SLLPAG
Trigger: CCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATG...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCTCACTGAAGAGCTCTaGCTGATGACAGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASLTEEL*LMTGRI
Trigger: GATCCTCCCTGTCATCAGGCAGAGCTCTTCAGTGAG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360581.6
CDS-3UTR GCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGTCCTCGGTTATAGCTaGTGCACAGTTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRVLGYS*CTVSHL
Trigger: CAGATGGGAAACTGTGCAGCAGCTATAACCGAGGAC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGAATCCTGTGATCTTTaGTCCCTGCAGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRESCDL*SLQGKE
Trigger: CTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGAGAATCTGCATCTCATaGCTCTCAGTTCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRRICIS*LSVLSR
Trigger: CCGGGAGAGAACTGAGAGGCATGAGATGCAGATTCT...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAATCTGCCCGGTCCCACTaGAATCGAAGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSRNVILESCDLCSLQGKSARSH*NRSCPL
Trigger: CAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGA...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATTCAGTGCAAGCCACTaGGGAAGAATCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPFSASH*GRIQRL
Trigger: CAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGCTTGAAGGAACTTCATaGGGTAGACGATGGCATGGT +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRLEGTS*GRRWHG
Trigger: ACCATGCCATCGTCTACCCCATGAAGTTCCTTCAAG...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR CCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCACTGCACTTCACCGTTaGACAGTGTCCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTTALHR*TVSSSQ
Trigger: TTGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAHDGHV*GPVGVV
Trigger: GACGACTCCTACTGGACCCCATACATGACCATCGTG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCACGCTCCTGGGTGTCTaGAAGGAGGTTGAAATTGTC +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTTLLGV*KEVEIV
Trigger: GACAATTTCAACCTCCTTCCAGACACCCAGGAGCGT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAACGCTCCTGGGTGTCTaGAAGGAGGTTGAAATTGTC +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPTLLGV*KEVEIV
Trigger: GACAATTTCAACCTCCTTCCAGACACCCAGGAGCGT...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACACCCGGAACGTCATTCTaGAATCCTGTGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTPGTSF*NPVIFA
Trigger: AGCAAAGATCACAGGATTCCAGAATGACGTTCCGGG...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGCTGGGGAGTTCGTGTTaGCCAATACTTAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRLGSSC*PILKQC
Trigger: GCACTGCTTAAGTATTGGCCAACACGAACTCCCCAG...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRAGMNN*GVRVGQ
Trigger: TTGGCCAACACGAACTCCCCAGTTATTCATGCCAGC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTCCAAGCCAGGACCCTaGACCACTAATGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTSKPGP*TTNACV
Trigger: AACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGA...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CAA 72 bp TCGTCAGGCCACAGGGCCCAGCACTGCACTTCACCGTaGGACAGTGTCCTCTTCCCAAATATGATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SSGHRAQHCTSP*DSVLFPNMIRV
Trigger: CACCCTGATCATATTTGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGTGCTGGGCCCTGTGGCCTGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396095.6
CDS-3UTR TCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCATCCTCTTCCCAAATATaGTCAGGGTGGGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPSSSQI*SGWEWR
Trigger: TCTCCATTCCCACCCTGATCATATTTGGGAAGAGGA...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAGCACAGTTTCCCATCTaGGCAGTTGGAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPAQFPI*AVGNHC
Trigger: ACAGTGATTTCCAACTGCTCAGATGGGAAACTGTGC...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCGCCCTAGGGTCTAGATaGATTCTGGCTTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAALGSR*ILAWTE
Trigger: TTCTGTCCAAGCCAGAATTCATCTAGACCCTAGGGC...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGGGAGGATCTACGTGCTaGTCTCTCCTTGGCAATTAC +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTGGSTC*SLLGNY
Trigger: GTAATTGCCAAGGAGAGAGCAGCACGTAGATCCTCC...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360581.6
CDS-3UTR GCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCTCGGTTATAGCTGCTaGACAGTTTCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLALGYSC*TVSHLS
Trigger: GCTCAGATGGGAAACTGTGCAGCAGCTATAACCGAG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCGTCCTCGGTTATAGCTaGTGCACAGTTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAVLGYS*CTVSHL
Trigger: CAGATGGGAAACTGTGCAGCAGCTATAACCGAGGAC...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGAATCCTGTGATCTTTaGTCCCTGCAGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPESCDL*SLQGKE
Trigger: CTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTC...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGCTTGAAGGAACTTCATaGGGTAGACGATGGCATGGT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRLEGTS*GRRWHG
Trigger: ACCATGCCATCGTCTACCCCATGAAGTTCCTTCAAG...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR CCA 90 bp AGTACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGCCAGGAAGGCCACGATaGTCATGTATGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: STPGRPRWSCMGSSRSRQPGRPR*SCMGSS
Trigger: ACTGGACCCCATACATGACCATCGTGGCCTTCCTGG...CTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTACGCTCCTGGGTGTCTaGAAGGAGGTTGAAATTGTC +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASTLLGV*KEVEIV
Trigger: GACAATTTCAACCTCCTTCCAGACACCCAGGAGCGT...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGGGCACTATTCAATGCTaGCAGGTTCTGAATGATCAC +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRGTIQC*QVLNDH
Trigger: GTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCACCCGGAACGTCATTCTaGAATCCTGTGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPPGTSF*NPVIFA
Trigger: AGCAAAGATCACAGGATTCCAGAATGACGTTCCGGG...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGCCCGGAACGTCATTCTaGAATCCTGTGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRPGTSF*NPVIFA
Trigger: AGCAAAGATCACAGGATTCCAGAATGACGTTCCGGG...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCTGGGGAGTTCGTGTTaGCCAATACTTAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLALGSSC*PILKQC
Trigger: GCACTGCTTAAGTATTGGCCAACACGAACTCCCCAG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGCTGGGGAGTTCGTGTTaGCCAATACTTAAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTLGSSC*PILKQC
Trigger: GCACTGCTTAAGTATTGGCCAACACGAACTCCCCAG...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAAGAGGGCTGGGAATGGTaGGGAAGGAAGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LSRNVILESCDLCSLQGKEGWEW*GRKAFP
Trigger: AGGAAACGCCTTCCTTCCCCACCATTCCCAGCCCTC...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CTGATGATTGTCAGAGGGATGAAGTACACCAGGAAGGCCACGATGGTCATGTATGCTCCTGCAGCTGAGTaGGGGAGTCCAGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LMIVRGMKYTRKATMVMYAPAAE*GSPACL
Trigger: GAGGCAAGCTGGACTCCCTCACTCAGCTGCAGGAGC...ATACATGACCATCGTGGCCTTCCTGGTGTACTTCATCCCTCTGACAATCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCTGGCTCAGGCGGGGTTaGGCCTCACTGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GTIQCWQVLNDHRGIETLWLRRG*ASLSLL
Trigger: GAGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCA...GAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTCTGTGATGGCCAGCTaGGTCACAAAGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTSVMAS*VTKKVI
Trigger: AATGACCTTCTTTGTGACTCAGCTGGCCATCACAGA...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000396095.6
CDS-3UTR TCA 90 bp ACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCGCACAGTTTCCCATCTaGGCAGTTGGAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: TPGRPRWSCMGSSRSRQAAQFPI*AVGNHC
Trigger: ACAGTGATTTCCAACTGCTCAGATGGGAAACTGTGC...GGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCCTGGGTGTCTGGCCTTCCTGGCTGGCATaGATAACTGGGGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: CWQVLNDHRGIETLLGVWPSWLA*ITGEFV
Trigger: CACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGG...CCAGACACCCAGGAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp GTATTTTTCACTGGTGCCTTGGATGTTTACCCTGGCCACTGCAGCCCAGCTCAAGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCG +
Preference number: 4 (lower is better)
Translates to: VFFTGALDVYPGHCSPAQEESSV*PVPLES
Trigger: CGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTC...TTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR GCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGGGCTTGGACAGAATCTaGATCTCATGCCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTGLDRI*ISCLSV
Trigger: AACTGAGAGGCATGAGATGCAGATTCTGTCCAAGCC...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCGGCTTGGACAGAATCTaGATCTCATGCCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAGLDRI*ISCLSV
Trigger: AACTGAGAGGCATGAGATGCAGATTCTGTCCAAGCC...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCGGCACTATTCAATGCTaGCAGGTTCTGAATGATCAC +
Preference number: 4 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTGTIQC*QVLNDH
Trigger: GTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCACTGAGCCCACCTCACTaGAGAGCTCTGCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSALSPPH*RALPDD
Trigger: GTCATCAGGCAGAGCTCTTCAGTGAGGTGGGCTCAG...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360581.6
CDS-3UTR TCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATTTTTGCCTTTGAGATaGGTCCTCGGTTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPFLPLR*VLGYSC
Trigger: GCAGCTATAACCGAGGACTCATCTCAAAGGCAAAAA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGCTTGATTTTTGCCTTTaGGATGAGTCCTCGGTTATA +
Preference number: 4 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRLDFCL*DESSVI
Trigger: TATAACCGAGGACTCATCTCAAAGGCAAAAATCAAG...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCTGTCTGGAAGGAGGTTaGAATTGTCCAAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: RPRWSCMGSSRSRQATGPCLEGG*NCPKCQ
Trigger: TTGACATTTTGGACAATTTCAACCTCCTTCCAGACA...GGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGACATTCTGGAATCCTGTaGTCTTTGCTCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FSPGTSFWNPVIFAPCRGHSGIL*SLLPAG
Trigger: CCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATG...TCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCACACAGGGCCCAGCACTaGACTTCACCGTTGGACAGT +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSAHRAQH*TSPLDS
Trigger: ACTGTCCAACGGTGAAGTGCAGTGCTGGGCCCTGTG...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGATGGCACTATTCAATaGTGGCAGGTTCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRDGTIQ*WQVLND
Trigger: ATCATTCAGAACCTGCCAGCATTGAATAGTGCCATC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAAGTGATCTTTGCTCCCTaGAGGGGAAAGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: LSRNVILESCDLCSLQGKVIFAP*RGKRWS
Trigger: GCTCCATCTCTTTCCCCTGCAGGGAGCAAAGATCAC...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp GAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCAGAACATTTGTCTTGTaGATCTCCCAGGTAATGACG +
Preference number: 4 (lower is better)
Translates to: EGHDGHVWGPVGVVRPQGRTFVL*ISQVMT
Trigger: CGTCATTACCTGGGAGATGCACAAGACAAATGTTCT...GCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCACTCTGTGAAGTTGGCTaGCATGGCTCAGGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSALCEVG*HGSGGV
Trigger: AACCCCGCCTGAGCCATGCCAGCCAACTTCACAGAG...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CAGAGGGATGAAGTACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTATTCAGTGCAAGCCACTaGGGAAGAATCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: QRDEVHQEGHDGHVWGPVFSASH*GRIQRL
Trigger: CAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAA...TACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACTTCATCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAACACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSRNVILESCDLCSLQGKHDGHV*GPVGVV
Trigger: GACGACTCCTACTGGACCCCATACATGACCATCGTG...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTTCCCATCTGAGCAGTTaGAAATCACTGTTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASSHLSS*KSLFRR
Trigger: CCTACGAAACAGTGATTTCCAACTGCTCAGATGGGA...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATCCCATCTGAGCAGTTaGAAATCACTGTTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPSHLSS*KSLFRR
Trigger: CCTACGAAACAGTGATTTCCAACTGCTCAGATGGGA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAGTCAAACAGGAAGTATaGACTCCAACAGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPVKQEV*TPTADE
Trigger: TTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGAC...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGGCACTATTCAATGCTaGCAGGTTCTGAATGATCAC +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPGTIQC*QVLNDH
Trigger: GTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAGGTCTAGATGAATTCTaGCTTGGACAGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPGLDEF*LGQNLH
Trigger: ATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CAGAGGGATGAAGTACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTATCCAAGCCAGGACCCTaGACCACTAATGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QRDEVHQEGHDGHVWGPVSKPGP*TTNACV
Trigger: AACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGA...TACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACTTCATCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GTTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGTCTGTGATGGCCAGCTaGGTCACAAAGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: VLSRNVILESCDLCSLQGSVMAS*VTKKVI
Trigger: AATGACCTTCTTTGTGACTCAGCTGGCCATCACAGA...CCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396095.6
CDS-3UTR TCA 90 bp GTTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGTCCTCTTCCCAAATATaGTCAGGGTGGGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: VLSRNVILESCDLCSLQGSSSQI*SGWEWR
Trigger: TCTCCATTCCCACCCTGATCATATTTGGGAAGAGGA...CCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GTTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGGCACAGTTTCCCATCTaGGCAGTTGGAAATCACTGT +
Preference number: 4 (lower is better)
Translates to: VLSRNVILESCDLCSLQGAQFPI*AVGNHC
Trigger: ACAGTGATTTCCAACTGCTCAGATGGGAAACTGTGC...CCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGCTTGATTTTTGCCTTTaGGATGAGTCCTCGGTTATA +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRLDFCL*DESSVI
Trigger: TATAACCGAGGACTCATCTCAAAGGCAAAAATCAAG...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGTCTGGAAGGAGGTTaGAATTGTCCAAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRCLEGG*NCPKCQ
Trigger: TTGACATTTTGGACAATTTCAACCTCCTTCCAGACA...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CAGCACTGCACTTCACCGTTGGACAGTGTCCTCTTCCCAAATATGATCAGGGTGCATTCTGGAATCCTGTaGTCTTTGCTCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QHCTSPLDSVLFPNMIRVHSGIL*SLLPAG
Trigger: CCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATG...CACCCTGATCATATTTGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396095.6
CDS-3UTR GCA 90 bp CCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAAGAGACTCGGTTATAGCTGCTaGACAGTTTCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGTSFWNPVIFAPCRGKRLGYSC*TVSHLS
Trigger: GCTCAGATGGGAAACTGTGCAGCAGCTATAACCGAG...TCTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp TTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGACTCGGTTATAGCTGCTaGACAGTTTCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: FSPGTSFWNPVIFAPCRGLGYSC*TVSHLS
Trigger: GCTCAGATGGGAAACTGTGCAGCAGCTATAACCGAG...TCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGGATGGCACTATTCAATaGTGGCAGGTTCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTDGTIQ*WQVLND
Trigger: ATCATTCAGAACCTGCCAGCATTGAATAGTGCCATC...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAAGAACATTTGTCTTGTaGATCTCCCAGGTAATGACG +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPRTFVL*ISQVMT
Trigger: CGTCATTACCTGGGAGATGCACAAGACAAATGTTCT...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTAGAACATTTGTCTTGTaGATCTCCCAGGTAATGACG +
Preference number: 4 (lower is better)
Translates to: PGPWTTNACVHWVQVLASRTFVL*ISQVMT
Trigger: CGTCATTACCTGGGAGATGCACAAGACAAATGTTCT...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AGTACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGATGAGGACCCTGGCTTaGTTTTCTGCAAATAGCGGA +
Preference number: 4 (lower is better)
Translates to: STPGRPRWSCMGSSRSRQMRTLA*FSANSG
Trigger: TCCGCTATTTGCAGAAAAGCAAGCCAGGGTCCTCAT...CTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396095.6
CDS-3UTR CCA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTTCATGGGGTAGACGATaGCATGGTATCTGTCTATGC +
Preference number: 4 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVSWGRR*HGICLC
Trigger: GCATAGACAGATACCATGCCATCGTCTACCCCATGA...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR CCA 90 bp TTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAACTGCACTTCACCGTTaGACAGTGTCCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: FSPGTSFWNPVIFAPCRGTALHR*TVSSSQ
Trigger: TTGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGT...TCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCAAACAGGAAGTATaGACTCCAACAGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPVKQEV*TPTADE
Trigger: TTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGAC...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCGGTCTAGATGAATTCTaGCTTGGACAGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAGLDEF*LGQNLH
Trigger: ATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTTTTTTGCCTTTGAGATaGGTCCTCGGTTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVFLPLR*VLGYSC
Trigger: GCAGCTATAACCGAGGACTCATCTCAAAGGCAAAAA...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATGTCTGGAAGGAGGTTaGAATTGTCCAAAATGTCAA +
Preference number: 4 (lower is better)
Translates to: SQDPGPLMPVFTGFRCWPCLEGG*NCPKCQ
Trigger: TTGACATTTTGGACAATTTCAACCTCCTTCCAGACA...TGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCGAGCAGCACAACCTGTaGTGGCCAGCTGAGTCACAA +
Preference number: 4 (lower is better)
Translates to: GTIQCWQVLNDHRGIETLEQHNL*WPAESQ
Trigger: TTGTGACTCAGCTGGCCATCACAGGTTGTGCTGCTC...GAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381544.6
CDS-3UTR GCA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCACCAATACTTAAGCAGTaGATGCAGTCATTAGAACAT +
Preference number: 4 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPPILKQ*MQSLEH
Trigger: ATGTTCTAATGACTGCATGCACTGCTTAAGTATTGG...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTGAATGATCACAGAGGCATAGAAACGCTCCTGGGTGTCTGGAAGGAGGTTGAATTCAGTGCAAGCCACTaGGGAAGAATCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LNDHRGIETLLGVWKEVEFSASH*GRIQRL
Trigger: CAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAA...TTCAACCTCCTTCCAGACACCCAGGAGCGTTTCTATGCCTCTGTGATCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGAAATCATGGGGTAGACGATaGCATGGTATCTGTCTATGC +
Preference number: 4 (lower is better)
Translates to: LSRNVILESCDLCSLQGKSWGRR*HGICLC
Trigger: GCATAGACAGATACCATGCCATCGTCTACCCCATGA...TTTCCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381544.6
CDS-3UTR CCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCAAATGCCTGTGTTCACTaGGTTCAGGTGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSANACVH*VQVLAS
Trigger: ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATT...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GTTGATGGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAATGACGAGGGTGGGGTaGAGTTGGCTCGGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: VDGTIQCWQVLNDHRGIEMTRVG*SWLGFH
Trigger: ATGGAACCCGAGCCAACTTCACCCCACCCTCGTCAT...TTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCACTCGGTTATAGCTGCTaGACAGTTTCCCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSALGYSC*TVSHLS
Trigger: GCTCAGATGGGAAACTGTGCAGCAGCTATAACCGAG...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTAGAACATTTGTCTTGTaGATCTCCCAGGTAATGACG +
Preference number: 4 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVRTFVL*ISQVMT
Trigger: CGTCATTACCTGGGAGATGCACAAGACAAATGTTCT...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGCCAATACTTAAGCAGTaGATGCAGTCATTAGAACAT +
Preference number: 4 (lower is better)
Translates to: HLPGNDEGGVKLARVPCTPILKQ*MQSLEH
Trigger: ATGTTCTAATGACTGCATGCACTGCTTAAGTATTGG...CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTTTCAGTGCAAGCCACTaGGGAAGAATCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LWHPHPGIFASKHLLDDPFSASH*GRIQRL
Trigger: CAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAA...AGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CCA 90 bp GTTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGGTCAAACAGGAAGTATaGACTCCAACAGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: VLSRNVILESCDLCSLQGVKQEV*TPTADE
Trigger: TTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGAC...CCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCAACGCTCCTGGGTGTCTaGAAGGAGGTTGAAATTGTC +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSATLLGV*KEVEIV
Trigger: GACAATTTCAACCTCCTTCCAGACACCCAGGAGCGT...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCAGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSAAGMNN*GVRVGQ
Trigger: TTGGCCAACACGAACTCCCCAGTTATTCATGCCAGC...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
3UTR CAA 72 bp GCTCCTTTTACCTTCTCTGTATTTTTCACTGGTGCCTaGGATGTTTACCCTGGCCACTGCAGCCCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: APFTFSVFFTGA*DVYPGHCSPAQ
Trigger: TTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGGTAAAAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp TATTTGCCTCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTGCTCCTGCAGCTGAGTaGGGGAGTCCAGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: YLPLSICWMILITSTSTVAPAAE*GSPACL
Trigger: GAGGCAAGCTGGACTCCCTCACTCAGCTGCAGGAGC...AACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp TGCTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATTGGTGGCTCAGGCGGGGTTaGGCCTCACTGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CWMILITSTSTVIGVKNWWLRRG*ASLSLL
Trigger: GAGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCA...CCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCATCTGTGATGGCCAGCTaGGTCACAAAGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSASVMAS*VTKKVI
Trigger: AATGACCTTCTTTGTGACTCAGCTGGCCATCACAGA...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000396095.6
CDS-3UTR TCA 90 bp GGTCTAGATGAATTCTGGCTTGGACAGAATCTGCATCTCATGCCTCTCAGTTCTTCCAGGCGATCACAATaGGGACCCTGGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: GLDEFWLGQNLHLMPLSSSRRSQ*GPWLAF
Trigger: AAAAGCAAGCCAGGGTCCTCATTGTGATCGCCTGGA...AGAACTGAGAGGCATGAGATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTGGCTGGCATGAATAACTGGGGAGTTCGTGTTGGCCAATACTTAAGCAGTGCACCCGGAACGTCATTCTaGAATCCTGTGATCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LAGMNNWGVRVGQYLSSAPGTSF*NPVIFA
Trigger: AGCAAAGATCACAGGATTCCAGAATGACGTTCCGGG...TGCACTGCTTAAGTATTGGCCAACACGAACTCCCCAGTTATTCATGCCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCCTGGGTGTCTGGGGTCTAGATGAATTCTaGCTTGGACAGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: CWQVLNDHRGIETLLGVWGLDEF*LGQNLH
Trigger: ATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC...CCAGACACCCAGGAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACTTGATAGCGAGGGCTGGGAATGGTaGGGAAGGAAGGCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: WTPTADEGKNDDDAILDSEGWEW*GRKAFP
Trigger: AGGAAACGCCTTCCTTCCCCACCATTCCCAGCCCTC...GCTATCAAGTATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGGCACAGAGCCCTCCCTaGGCCCACCTCACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKAQSPP*AHLTEE
Trigger: CTCTTCAGTGAGGTGGGCTCAGGGAGGGCTCTGTGC...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR TCA 90 bp TCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTCCTTGCTCCTGCAGCTaGGTGAGGGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SKHLLDDPNYLYFYGYRSPCSCS*VRESSL
Trigger: CAAGCTGGACTCCCTCACTCAGCTGCAGGAGCAAGG...ACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGTGGCTCAGGCGGGGTTaGGCCTCACTGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKWLRRG*ASLSLL
Trigger: GAGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCA...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR TCA 90 bp CTGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTACTGTGATGGCCAGCTaGGTCACAAAGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LWHPHPGIFASKHLLDDPTVMAS*VTKKVI
Trigger: AATGACCTTCTTTGTGACTCAGCTGGCCATCACAGT...AGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR GCA 90 bp GTTGATGGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAGTGATCTTTGCTCCCTaGAGGGGAAAGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: VDGTIQCWQVLNDHRGIEVIFAP*RGKRWS
Trigger: GCTCCATCTCTTTCCCCTGCAGGGAGCAAAGATCAC...TTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp GGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAAACGCTCGGCTTGGACAGAATCTaGATCTCATGCCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GTIQCWQVLNDHRGIETLGLDRI*ISCLSV
Trigger: AACTGAGAGGCATGAGATGCAGATTCTGTCCAAGCC...GAGCGTTTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TATTTGCCTCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTTCTGCCCGGTCCCACTaGAATCGAAGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YLPLSICWMILITSTSTVSARSH*NRSCPL
Trigger: CAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGA...AACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CCA 90 bp TGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACTTGATAGCCCAGGAAGGCCACGATaGTCATGTATGGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: WTPTADEGKNDDDAILDSPGRPR*SCMGSS
Trigger: ACTGGACCCCATACATGACCATCGTGGCCTTCCTGG...GCTATCAAGTATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GAAACTTTCCCCCATCCCAGGTTCCATCTTCAGAACTCTTGCTCCTTTTACCTTCCCAGCTCAAGCAGGTaGGCTTGTTATACTGTGATG +
Preference number: 4 (lower is better)
Translates to: ETFPHPRFHLQNSCSFYLPSSSR*ACYTVM
Trigger: CATCACAGTATAACAAGCCCACCTGCTTGAGCTGGG...AAGGTAAAAGGAGCAAGAGTTCTGAAGATGGAACCTGGGATGGGGGAAAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp ATAGAAAAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAGCTCCTGCAGCTGAGTaGGGGAGTCCAGCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: IEKALSDIPNFQGYIQSTAPAAE*GSPACL
Trigger: GAGGCAAGCTGGACTCCCTCACTCAGCTGCAGGAGC...TGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTTTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR TCA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGCCTTGCTCCTGCAGCTaGGTGAGGGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKPCSCS*VRESSL
Trigger: CAAGCTGGACTCCCTCACTCAGCTGCAGGAGCAAGG...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR TCA 90 bp GGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTAATTGGGCTTGTTATACTGTaGTGGCCAGCTGAGTCACAA +
Preference number: 4 (lower is better)
Translates to: GILIQGYLPLSICWMILIGLVIL*WPAESQ
Trigger: TTGTGACTCAGCTGGCCATCACAGTATAACAAGCCC...AATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CCA 90 bp CCTTCTCTGTATTTTTCACTGGTGCCTTGGATGTTTACCCTGGCCACTGCAGCCCCTCTAAGCATTTGCTaGATGATCCTAATTACCTCT +
Preference number: 4 (lower is better)
Translates to: PSLYFSLVPWMFTLATAAPLSIC*MILITS
Trigger: AGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGG...GGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp TGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACTTGATAGCGCCCTAGGGTCTAGATaGATTCTGGCTTGGACAGAA +
Preference number: 4 (lower is better)
Translates to: WTPTADEGKNDDDAILDSALGSR*ILAWTE
Trigger: TTCTGTCCAAGCCAGAATTCATCTAGACCCTAGGGC...GCTATCAAGTATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp CTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCATGACGAGGGTGGGGTaGAGTTGGCTCGGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLIQIVRITMPYMMLMIVMTRVG*SWLGFH
Trigger: ATGGAACCCGAGCCAACTTCACCCCACCCTCGTCAT...GACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCG +
Preference number: 4 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKEESSV*PVPLES
Trigger: CGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTC...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR GCA 90 bp TGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACTTGATAGCGAATCCTGTGATCTTTaGTCCCTGCAGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: WTPTADEGKNDDDAILDSESCDL*SLQGKE
Trigger: CTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTC...GCTATCAAGTATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAATCTGCCCGGTCCCACTaGAATCGAAGCTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KALSDIPNFQGYIQSTKESARSH*NRSCPL
Trigger: CAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGA...TTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CCA 90 bp TGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATACTTGATAGCACTGCACTTCACCGTTaGACAGTGTCCTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WTPTADEGKNDDDAILDSTALHR*TVSSSQ
Trigger: TTGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGT...GCTATCAAGTATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp AAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGCACGATGGTCATGTATaGGGTCCAGTAGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: KMSNRKYGLQQQMKARMMHDGHV*GPVGVV
Trigger: GACGACTCCTACTGGACCCCATACATGACCATCGTG...CATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp GGAAGGAGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGGCTGGCATGAATAACTaGGGAGTTCGTGTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GRRLKLSKMSNRKYGLQQAGMNN*GVRVGQ
Trigger: TTGGCCAACACGAACTCCCCAGTTATTCATGCCAGC...CTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTTCAGGTGCTGGCCAGTaGGAAGGAGGGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: LLLIQIVRITMPYMMLMISGAGQ*EGGLGM
Trigger: CATTCCCAGCCCTCCTTCCCACTGGCCAGCACCTGA...AATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TATTTGCCTCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTCTTGGATGTTTACCCTaGCCACTGCAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: YLPLSICWMILITSTSTVLGCLP*PLQPSS
Trigger: TGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAG...AACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp ATAGAAAAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACACTGAGCCCACCTCACTaGAGAGCTCTGCCTGATGAC +
Preference number: 4 (lower is better)
Translates to: IEKALSDIPNFQGYIQSTLSPPH*RALPDD
Trigger: GTCATCAGGCAGAGCTCTTCAGTGAGGTGGGCTCAG...TGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTTTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR TCA 90 bp CTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCCCTTCCTGGCTGGCATaGATAACTGGGGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: LLIQIVRITMPYMMLMIVPSWLA*ITGEFV
Trigger: CACGAACTCCCCAGTTATTCATGCCAGCCAGGAAGG...GACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGAGAATCTGCATCTCATaGCTCTCAGTTCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RLKLSKMSNRKYGLQQQMRICIS*LSVLSR
Trigger: CCGGGAGAGAACTGAGAGGCATGAGATGCAGATTCT...CATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CTGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTTTGCCTCTAAGCATTTaGTGGATGATCCTAATTACC +
Preference number: 4 (lower is better)
Translates to: LWHPHPGIFASKHLLDDPLPLSI*WMILIT
Trigger: GGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAA...AGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CCA 90 bp AAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAACTCTGTGAAGTTGGCTaGCATGGCTCAGGCGGGGTT +
Preference number: 4 (lower is better)
Translates to: KALSDIPNFQGYIQSTKELCEVG*HGSGGV
Trigger: AACCCCGCCTGAGCCATGCCAGCCAACTTCACAGAG...TTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CCA 90 bp TGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTACTCTGTATTTTTCACTaGTGCCTTGGATGTTTACCC +
Preference number: 4 (lower is better)
Translates to: CGILIQGYLPLSICWMILLCIFH*CLGCLP
Trigger: GGGTAAACATCCAAGGCACCAGTGAAAAATACAGAG...TAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp TTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCAGATCCAGGCGATCACAATaGGGACCCTGGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LIQIVRITMPYMMLMIVRSRRSQ*GPWLAF
Trigger: AAAAGCAAGCCAGGGTCCTCATTGTGATCGCCTGGA...TCTGACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp AAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGGGCTTGGACAGAATCTaGATCTCATGCCTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: KMSNRKYGLQQQMKARMMGLDRI*ISCLSV
Trigger: AACTGAGAGGCATGAGATGCAGATTCTGTCCAAGCC...CATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTATAGGCACTATTCAATGCTaGCAGGTTCTGAATGATCAC +
Preference number: 4 (lower is better)
Translates to: QEVWTPTADEGKNDDDAIGTIQC*QVLNDH
Trigger: GTGATCATTCAGAACCTGCCAGCATTGAATAGTGCC...TATAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CACTGTTTCGTAGGTTTTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATAAATGCCTGTGTTCACTaGGTTCAGGTGCTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: HCFVGFAFNPNSSDHNAINACVH*VQVLAS
Trigger: ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATT...TATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAAAACCTACGAAACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp GTTGGAAATCACTGTTTCGTAGGTTTTGCTTTTAATCCAAATAGTTCGGATCACCCTGTGATGGCCAGCTaGGTCACAAAGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: VGNHCFVGFAFNPNSSDHPVMAS*VTKKVI
Trigger: AATGACCTTCTTTGTGACTCAGCTGGCCATCACAGG...GTGATCCGAACTATTTGGATTAAAAGCAAAACCTACGAAACAGTGATTTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381544.6
CDS-3UTR GCA 90 bp AAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAACTCACTGAAGAGCTCTaGCTGATGACAGGGAGGATC +
Preference number: 4 (lower is better)
Translates to: KALSDIPNFQGYIQSTKELTEEL*LMTGRI
Trigger: GATCCTCCCTGTCATCAGGCAGAGCTCTTCAGTGAG...TTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR GCA 90 bp TTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCAGAGTCCTCGGTTATAGCTaGTGCACAGTTTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LIQIVRITMPYMMLMIVRVLGYS*CTVSHL
Trigger: CAGATGGGAAACTGTGCAGCAGCTATAACCGAGGAC...TCTGACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCGAATCCTGTGATCTTTaGTCCCTGCAGGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LLIQIVRITMPYMMLMIVESCDL*SLQGKE
Trigger: CTCTTTCCCCTGCAGGGAGCAAAGATCACAGGATTC...GACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp ATAGAAAAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACATTCAGTGCAAGCCACTaGGGAAGAATCCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: IEKALSDIPNFQGYIQSTFSASH*GRIQRL
Trigger: CAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAA...TGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTTTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CCA 90 bp AGGAGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGGGTCTAGATGAATTCTaGCTTGGACAGAATCTGCAT +
Preference number: 4 (lower is better)
Translates to: RRLKLSKMSNRKYGLQQQGLDEF*LGQNLH
Trigger: ATGCAGATTCTGTCCAAGCCAGAATTCATCTAGACC...CTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTTCCAAGCCAGGACCCTaGACCACTAATGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LLLIQIVRITMPYMMLMISKPGP*TTNACV
Trigger: AACACAGGCATTAGTGGTCCAGGGTCCTGGCTTGGA...AATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TATTTGCCTCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTTTTTCACTGGTGCCTTaGATGTTTACCCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: YLPLSICWMILITSTSTVFSLVP*MFTLAT
Trigger: AGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAA...AACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp AACAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGATGATGCTACTTGATTTTTGCCTTTaGGATGAGTCCTCGGTTATA +
Preference number: 4 (lower is better)
Translates to: NRKYGLQQQMKARMMMMLLDFCL*DESSVI
Trigger: TATAACCGAGGACTCATCTCAAAGGCAAAAATCAAG...TAGCATCATCATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp TGCTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATTGGGTTGGTAGGAAAGATTaGAGAAACTTTCCCCCATCC +
Preference number: 4 (lower is better)
Translates to: CWMILITSTSTVIGVKNWVGRKD*RNFPPS
Trigger: GGATGGGGGAAAGTTTCTTCAATCTTTCCTACCAAC...CCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR GCA 90 bp TTTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATAGAATCTGCATCTCATaGCTCTCAGTTCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FAFNPNSSDHNAIHDADDRICIS*LSVLSR
Trigger: CCGGGAGAGAACTGAGAGGCATGAGATGCAGATTCT...ATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp GTTGATGGCACTATTCAATGCTGGCAGGTTCTGAATGATCACAGAGGCATAGAACCAATACTTAAGCAGTaGATGCAGTCATTAGAACAT +
Preference number: 4 (lower is better)
Translates to: VDGTIQCWQVLNDHRGIEPILKQ*MQSLEH
Trigger: ATGTTCTAATGACTGCATGCACTGCTTAAGTATTGG...TTCTATGCCTCTGTGATCATTCAGAACCTGCCAGCATTGAATAGTGCCATCAAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR TCA 90 bp ATAGAAAAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACATCTGTGATGGCCAGCTaGGTCACAAAGAAGGTCATT +
Preference number: 4 (lower is better)
Translates to: IEKALSDIPNFQGYIQSTSVMAS*VTKKVI
Trigger: AATGACCTTCTTTGTGACTCAGCTGGCCATCACAGA...TGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTTTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR TCA 90 bp CTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCTTTTTGCCTTTGAGATaGGTCCTCGGTTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLIQIVRITMPYMMLMIVFLPLR*VLGYSC
Trigger: GCAGCTATAACCGAGGACTCATCTCAAAGGCAAAAA...GACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp CTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATTGGAGTGTATTTTTCACTGGTaGCTTGGATGTTTACCCTGG +
Preference number: 4 (lower is better)
Translates to: LDDPNYLYFYGYRSEKLECIFHW*LGCLPW
Trigger: CCAGGGTAAACATCCAAGGCACCAGTGAAAAATACA...CTCCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465305.5
3UTR CAA 72 bp TTCTACGGTTATAGGAGTGAAAAATTGGAGTTCTTGTaGGTAGGAAAGATTGAAGAAACTTTCCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: FYGYRSEKLEFL*VGKIEETFPHP
Trigger: GGGATGGGGGAAAGTTTCTTCAATCTTTCCTACCAACAAGAACTCCAATTTTTCACTCCTATAACCGTAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR TCA 90 bp TTTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTTTTTGCCTTTGAGATaGGTCCTCGGTTATAGCTGC +
Preference number: 4 (lower is better)
Translates to: FAFNPNSSDHNAIHDADDFLPLR*VLGYSC
Trigger: GCAGCTATAACCGAGGACTCATCTCAAAGGCAAAAA...ATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR GCA 90 bp GTTGGAAATCACTGTTTCGTAGGTTTTGCTTTTAATCCAAATAGTTCGGATCACGATGGCACTATTCAATaGTGGCAGGTTCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: VGNHCFVGFAFNPNSSDHDGTIQ*WQVLND
Trigger: ATCATTCAGAACCTGCCAGCATTGAATAGTGCCATC...GTGATCCGAACTATTTGGATTAAAAGCAAAACCTACGAAACAGTGATTTCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp TTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTTCCCATCTGAGCAGTTaGAAATCACTGTTTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LLLIQIVRITMPYMMLMISHLSS*KSLFRR
Trigger: CCTACGAAACAGTGATTTCCAACTGCTCAGATGGGA...AATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CCA 90 bp CTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCGTCAAACAGGAAGTATaGACTCCAACAGCAGATGAA +
Preference number: 4 (lower is better)
Translates to: LLIQIVRITMPYMMLMIVVKQEV*TPTADE
Trigger: TTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGAC...GACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
3UTR CAA 72 bp AATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATaGGAGTTCTTGTTGGTAGGAAAGATTGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: NYLYFYGYRSEK*EFLLVGKIEET
Trigger: AGTTTCTTCAATCTTTCCTACCAACAAGAACTCCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGGAGGGTGGGGTGAAGTaGGCTCGGGTTCCATGCACG +
Preference number: 5 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTREGGVK*ARVPCT
Trigger: CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTC...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGTGAGGGAGTCCAGCTaGCCTCCTGAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRVRESS*PPESWA
Trigger: TGCCCAGCTCTCAGGAGGCAAGCTGGACTCCCTCAC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAGTGAGGGAGTCCAGCTaGCCTCCTGAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPVRESS*PPESWA
Trigger: TGCCCAGCTCTCAGGAGGCAAGCTGGACTCCCTCAC...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGATGGCTCAGGCGGGGTaGAGCCTCACTGTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRMAQAG*SLTVLA
Trigger: AGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCAT...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGGAGGGTGGGGTGAAGTaGGCTCGGGTTCCATGCACG +
Preference number: 5 (lower is better)
Translates to: NDEGGVKLARVPCTCPSREGGVK*ARVPCT
Trigger: CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTC...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS TCA 90 bp GCTCTGCTGAACGGAGGCACAGAGCCCTCCCTGAGCCCACCTCACTaGAGAGCTCTGCCTGATGACAGGGAGGATCTACGTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: ALLNGGTEPSLSPPH*RALPDDREDLRAAL
Trigger: GAGAGCAGCACGTAGATCCTCCCTGTCATCAGGCAGAGCTCTTCAGTGAGGTGGGCTCAGGGAGGGCTCTGTGCCTCCGTTCAGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360581.6
CDS-3UTR CAA 90 bp GATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCAGCACTGATGGCTCAGGCGGGGTaGAGCCTCACTGTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: DGHVWGPVGVVRPQGPALMAQAG*SLTVLA
Trigger: AGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCAT...CAGTGCTGGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTATGGCTCAGGCGGGGTaGAGCCTCACTGTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PGPWTTNACVHWVQVLASMAQAG*SLTVLA
Trigger: AGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCAT...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGCACTGCACTTCACCGTaGGACAGTGTCCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRHCTSP*DSVLFP
Trigger: TGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGTG...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACACACTGCACTTCACCGTaGGACAGTGTCCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: RGWGEVGSGSMHVPKQVTHCTSP*DSVLFP
Trigger: TGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGTG...TGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AGTACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGAGGGTGGGGTGAAGTaGGCTCGGGTTCCATGCACG +
Preference number: 5 (lower is better)
Translates to: STPGRPRWSCMGSSRSRQEGGVK*ARVPCT
Trigger: CGTGCATGGAACCCGAGCCAACTTCACCCCACCCTC...CTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGAATGAGGACCCTGGCTaGCTTTTCTGTGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRNEDPG*LFCDGQ
Trigger: CTGGCCATCACAGAAAAGCAAGCCAGGGTCCTCATT...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381542.5
CDS GCA 90 bp AAAGTCACTGTTTCAGTGCAAGCCACTGGGGAAGAATCCAGCGTCTaGCCGGTCCCACTGGAATCGAAGCTGCCCTCTGTGAAGTTGGCT +
Preference number: 5 (lower is better)
Translates to: KVTVSVQATGEESSV*PVPLESKLPSVKLA
Trigger: AGCCAACTTCACAGAGGGCAGCTTCGATTCCAGTGGGACCGGGCAGACGCTGGATTCTTCCCCAGTGGCTTGCACTGAAACAGTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000359791.5
ENST00000360581.6
ENST00000381539.3
ENST00000381542.5
ENST00000381544.6
ENST00000381553.7
ENST00000396095.6
ENST00000465305.5
ENST00000531252.5
CDS-3UTR CAA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCAATGAGGACCCTGGCTaGCTTTTCTCCTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTNEDPG*LFSLKE
Trigger: TTCCTTCAAGGAGAAAAGCAAGCCAGGGTCCTCATT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR CAA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCACTGCACTTCACCGTaGGACAGTGTCCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVHCTSP*DSVLFP
Trigger: TGGGAAGAGGACACTGTCCAACGGTGAAGTGCAGTG...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAATGAGGACCCTGGCTaGCTTTTCTCCTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: KPGPWTTNACVHWVQVLANEDPG*LFSLKE
Trigger: TTCCTTCAAGGAGAAAAGCAAGCCAGGGTCCTCATT...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR CAA 90 bp CTGATGATTGTCAGAGGGATGAAGTACACCAGGAAGGCCACGATGGTCATGTATATGGCTCAGGCGGGGTaGAGCCTCACTGTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LMIVRGMKYTRKATMVMYMAQAG*SLTVLA
Trigger: AGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCAT...ATACATGACCATCGTGGCCTTCCTGGTGTACTTCATCCCTCTGACAATCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 5 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp ACACCAGGAAGGCCACGATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCCAGTCATTAGAACATTaGTCTTGTGCATCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TPGRPRWSCMGSSRSRQAQSLEH*SCASPR
Trigger: CCTGGGAGATGCACAAGACAAATGTTCTAATGACTG...GGCCTGACGACTCCTACTGGACCCCATACATGACCATCGTGGCCTTCCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS GCA 90 bp CAGCACAACCTGCAAATAGCGGACCACTCGGCAAACCAGGTCAGGTaGCGTGAAGTCTCCAGTGAATCGCCAATTAATATCTGTGATGGC +
Preference number: 5 (lower is better)
Translates to: QHNLQIADHSANQVR*REVSSESPINICDG
Trigger: GCCATCACAGATATTAATTGGCGATTCACTGGAGACTTCACGGCACCTGACCTGGTTTGCCGAGTGGTCCGCTATTTGCAGGTTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531252.5
CDS-3UTR CAA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCCCACAGAGTTATCAATaGCTCAGTCTTAAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTPQSYQ*LSLKGV
Trigger: TACTCCTTTAAGACTGAGCAATTGATAACTCTGTGG...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp TGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGACCATATCTGTCAAGATGTaGACCAGTCCTGTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: WGEVGSGSMHVPKQVTRTISVKM*TSPVKE
Trigger: TTCTTTCACAGGACTGGTCAACATCTTGACAGATAT...GGTCCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000396095.6
CDS-3UTR CAA 90 bp GATGGTCATGTATGGGGTCCAGTAGGAGTCGTCAGGCCACAGGGCCCAGCACTGATATCTGTCAAGATGTaGACCAGTCCTGTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: DGHVWGPVGVVRPQGPALISVKM*TSPVKE
Trigger: TTCTTTCACAGGACTGGTCAACATCTTGACAGATAT...CAGTGCTGGGCCCTGTGGCCTGACGACTCCTACTGGACCCCATACATGACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396095.6
CDS-3UTR CAA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTGGCTTGCTTTTCTCCTaGAAGGAACTTCATGGGGTA +
Preference number: 5 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVGLLFS*KELHGV
Trigger: TACCCCATGAAGTTCCTTCAAGGAGAAAAGCAAGCC...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360581.6
ENST00000381544.6
CDS-3UTR CAA 90 bp GGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGTGACAAGGATGATGATGCTATACTaGATAGCCTTGATTTTTGCC +
Preference number: 5 (lower is better)
Translates to: GWGEVGSGSMHVPKQVTRMMMLY*IALIFA
Trigger: GGCAAAAATCAAGGCTATCAAGTATAGCATCATCAT...CCTTGTCACCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 5 (lower is better)
Translates to: PGNDEGGVKLARVPCTCPIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...TGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp TGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTAATATGGCTCAGGCGGGGTaGAGCCTCACTGTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: WHPHPGIFASKHLLDDPNMAQAG*SLTVLA
Trigger: AGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCAT...ATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCCCACAGAGTTATCAATaGCTCAGTCTTAAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAPQSYQ*LSLKGV
Trigger: TACTCCTTTAAGACTGAGCAATTGATAACTCTGTGG...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCAGTCCACAGAGTTATCAATaGCTCAGTCTTAAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: PGPWTTNACVHWVQVLASPQSYQ*LSLKGV
Trigger: TACTCCTTTAAGACTGAGCAATTGATAACTCTGTGG...ACTGGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCCATGCACGTGCCCAAGCAGGATGATGATGCTATACTaGATAGCCTTGATTTTTGCC +
Preference number: 5 (lower is better)
Translates to: NDEGGVKLARVPCTCPSRMMMLY*IALIFA
Trigger: GGCAAAAATCAAGGCTATCAAGTATAGCATCATCAT...CCTGCTTGGGCACGTGCATGGAACCCGAGCCAACTTCACCCCACCCTCGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp TGTCTTGTGCATCTCCCAGGTAATGACGAGGGTGGGGTGAAGTTGGCTCGGGTTCAGTCATTAGAACATTaGTCTTGTGCATCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CLVHLPGNDEGGVKLARVQSLEH*SCASPR
Trigger: CCTGGGAGATGCACAAGACAAATGTTCTAATGACTG...AACCCGAGCCAACTTCACCCCACCCTCGTCATTACCTGGGAGATGCACAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS GCA 90 bp CAGCACAACCTGCAAATAGCGGACCACTCGGCAAACCAGGTCAGGTaGCGTGAAGTCTCCAGTGAATCGCCAATTAATATCTGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: QHNLQIADHSANQVR*REVSSESPINICQD
Trigger: ATCTTGACAGATATTAATTGGCGATTCACTGGAGACTTCACGGCACCTGACCTGGTTTGCCGAGTGGTCCGCTATTTGCAGGTTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359791.5
ENST00000360581.6
ENST00000381539.3
CDS-3UTR CAA 90 bp AAGCCAGGACCCTGGACCACTAATGCCTGTGTTCACTGGGTTCAGGTGCTGGCCATGATGATGCTATACTaGATAGCCTTGATTTTTGCC +
Preference number: 5 (lower is better)
Translates to: KPGPWTTNACVHWVQVLAMMMLY*IALIFA
Trigger: GGCAAAAATCAAGGCTATCAAGTATAGCATCATCAT...GGCCAGCACCTGAACCCAGTGAACACAGGCATTAGTGGTCCAGGGTCCTGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360581.6
ENST00000381542.5
ENST00000381544.6
ENST00000396095.6
CDS GCA 90 bp TACCATGACCTGCAAATAGCGGACCACTCGGCAAACCAGGTCAGGTaGCGTGAAGTCTCCAGTGAATCGCCAATTAATATCTGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: YHDLQIADHSANQVR*REVSSESPINICQD
Trigger: ATCTTGACAGATATTAATTGGCGATTCACTGGAGACTTCACGGCACCTGACCTGGTTTGCCGAGTGGTCCGCTATTTGCAGGTCATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CAA 90 bp GAAACTTTCCCCCATCCCAGGTTCCATCTTCAGAACTCTTGCTCCTTTTACCTTCTCAAGCAGGTGGGCTaGTTATACTGTGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: ETFPHPRFHLQNSCSFYLLKQVG*LYCDGQ
Trigger: CTGGCCATCACAGTATAACAAGCCCACCTGCTTGAG...AAGGTAAAAGGAGCAAGAGTTCTGAAGATGGAACCTGGGATGGGGGAAAGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp CTGTGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTTTTTTCACTGGTGCCTaGGATGTTTACCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LWHPHPGIFASKHLLDDPFFTGA*DVYPGH
Trigger: GTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAA...AGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCACAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS GCA 90 bp CTTGCTTTTCTGCAAATAGCGGACCACTCGGCAAACCAGGTCAGGTaGCGTGAAGTCTCCAGTGAATCGCCAATTAATATCTGTCAAGAT +
Preference number: 5 (lower is better)
Translates to: LAFLQIADHSANQVR*REVSSESPINICQD
Trigger: ATCTTGACAGATATTAATTGGCGATTCACTGGAGACTTCACGGCACCTGACCTGGTTTGCCGAGTGGTCCGCTATTTGCAGAAAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396095.6
CDS-3UTR CAA 90 bp TTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATTGTCAGGTGAGGGAGTCCAGCTaGCCTCCTGAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FNPNSSDHNAIHDADDCQVRESS*PPESWA
Trigger: TGCCCAGCTCTCAGGAGGCAAGCTGGACTCCCTCAC...CTGACAATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp GTTCTCTCCCGGAACGTCATTCTGGAATCCTGTGATCTTTGCTCCCTGCAGGGGATGATGATGCTATACTaGATAGCCTTGATTTTTGCC +
Preference number: 5 (lower is better)
Translates to: VLSRNVILESCDLCSLQGMMMLY*IALIFA
Trigger: GGCAAAAATCAAGGCTATCAAGTATAGCATCATCAT...CCCCTGCAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AAGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGTGAGGGAGTCCAGCTaGCCTCCTGAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KALSDIPNFQGYIQSTKEVRESS*PPESWA
Trigger: TGCCCAGCTCTCAGGAGGCAAGCTGGACTCCCTCAC...TTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CAA 90 bp TTTGCTTTTAATCCAAATAGTTCGGATCACAATGCCATACATGATGCTGATGATGTGAGGGAGTCCAGCTaGCCTCCTGAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: FAFNPNSSDHNAIHDADDVRESS*PPESWA
Trigger: TGCCCAGCTCTCAGGAGGCAAGCTGGACTCCCTCAC...ATCATCAGCATCATGTATGGCATTGTGATCCGAACTATTTGGATTAAAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGATGGCTCAGGCGGGGTaGAGCCTCACTGTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKMAQAG*SLTVLA
Trigger: AGCAAGGACAGTGAGGCTCAACCCCGCCTGAGCCAT...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CAA 90 bp GTATTTTTCACTGGTGCCTTGGATGTTTACCCTGGCCACTGCAGCCCAGCTCAATTTGCCTCTAAGCATTaGCTGGATGATCCTAATTAC +
Preference number: 5 (lower is better)
Translates to: VFFTGALDVYPGHCSPAQFASKH*LDDPNY
Trigger: GTAATTAGGATCATCCAGCAAATGCTTAGAGGCAAA...TTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp TGGCATCCTCATCCAGGGATATTTGCCTCTAAGCATTTGCTGGATGATCCTAATCCACAGAGTTATCAATaGCTCAGTCTTAAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: WHPHPGIFASKHLLDDPNPQSYQ*LSLKGV
Trigger: TACTCCTTTAAGACTGAGCAATTGATAACTCTGTGG...ATTAGGATCATCCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAGGATGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp AGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGCAGTCATTAGAACATTaGTCTTGTGCATCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: RLKLSKMSNRKYGLQQQMQSLEH*SCASPR
Trigger: CCTGGGAGATGCACAAGACAAATGTTCTAATGACTG...CATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGAAAAATTGGAGCTCATCCAGGGATATTaGCCTCTAAGCATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LDDPNYLYFYGYRSEKLELIQGY*PLSICW
Trigger: CCAGCAAATGCTTAGAGGCAAATATCCCTGGATGAG...CTCCAATTTTTCACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp GTTGGAAATCACTGTTTCGTAGGTTTTGCTTTTAATCCAAATAGTTCGGATCACGGCTTGCTTTTCTCCTaGAAGGAACTTCATGGGGTA +
Preference number: 5 (lower is better)
Translates to: VGNHCFVGFAFNPNSSDHGLLFS*KELHGV
Trigger: TACCCCATGAAGTTCCTTCAAGGAGAAAAGCAAGCC...GTGATCCGAACTATTTGGATTAAAAGCAAAACCTACGAAACAGTGATTTCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000381544.6
CDS-3UTR CAA 90 bp AGGAGGTTGAAATTGTCCAAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 5 (lower is better)
Translates to: RRLKLSKMSNRKYGLQQQIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...CTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTTGGACAATTTCAACCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp TCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTCCATCTTCAGAACTCTaGCTCCTTTTACCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SKHLLDDPNYLYFYGYRSPSSEL*LLLPSL
Trigger: CAGAGAAGGTAAAAGGAGCAAGAGTTCTGAAGATGG...ACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp AAAATGTCAAACAGGAAGTATGGACTCCAACAGCAGATGAAGGCAAGAATGATGATTAGAACATTTGTCTaGTGCATCTCCCAGGTAATG +
Preference number: 5 (lower is better)
Translates to: KMSNRKYGLQQQMKARMMIRTFV*CISQVM
Trigger: CATTACCTGGGAGATGCACAAGACAAATGTTCTAAT...CATCATTCTTGCCTTCATCTGCTGTTGGAGTCCATACTTCCTGTTTGACATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381544.6
ENST00000396095.6
CDS-3UTR CAA 90 bp CTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTATAGGAGTGTATAGGAGTGAAAAATaGGAGTTCTTGTTGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LSICWMILITSTSTVIGVYRSEK*EFLLVG
Trigger: TCCTACCAACAAGAACTCCAATTTTTCACTCCTATA...CACTCCTATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp TTGCCTCTAAGCATTTGCTGGATGATCCTAATTACCTCTACTTCTACGGTTATATTCAAGCTGATATTCTaGCCACCTCTAAATCCTTTC +
Preference number: 5 (lower is better)
Translates to: LPLSICWMILITSTSTVIFKLIF*PPLNPF
Trigger: GAAAGGATTTAGAGGTGGCAAGAATATCAGCTTGAA...TATAACCGTAGAAGTAGAGGTAATTAGGATCATCCAGCAAATGCTTAGAGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS-3UTR CAA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGCCACAGAGTTATCAATaGCTCAGTCTTAAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKPQSYQ*LSLKGV
Trigger: TACTCCTTTAAGACTGAGCAATTGATAACTCTGTGG...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS-3UTR CAA 90 bp AGGCTCTTTCAGACATACCAAACTTTCAAGGTTATATTCAGAGCACAAAAGAAGATATCTGTCAAGATGTaGACCAGTCCTGTGAAAGAA +
Preference number: 5 (lower is better)
Translates to: RLFQTYQTFKVIFRAQKKISVKM*TSPVKE
Trigger: TTCTTTCACAGGACTGGTCAACATCTTGACAGATAT...CTTCTTTTGTGCTCTGAATATAACCTTGAAAGTTTGGTATGTCTGAAAGAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381553.7
CDS CCA 72 bp CTCTGTATTTTTCACTGGTGCCTTGGATGTTTACCCTaGCCACTGCAGCCCAGCTCAAGCAGGTGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: LCIFHWCLGCLP*PLQPSSSRWAC
Trigger: ACAAGCCCACCTGCTTGAGCTGGGCTGCAGTGGCCAGGGTAAACATCCAAGGCACCAGTGAAAAATACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465305.5
CDS GCA 72 bp CTGCAAATAGCGGACCACTCGGCAAACCAGGTCAGGTaGCGTGAAGTCTCCAGTGAATCGCCAATTAATATC +
Preference number: 6 (lower is better)
Translates to: LQIADHSANQVR*REVSSESPINI
Trigger: GATATTAATTGGCGATTCACTGGAGACTTCACGGCACCTGACCTGGTTTGCCGAGTGGTCCGCTATTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359791.5
ENST00000360581.6
ENST00000381539.3
ENST00000381553.7
ENST00000396095.6
ENST00000531252.5
CDS CCA 72 bp TCTCATGCCTCTCAGTTCTCTCCCGGAACGTCATTCTaGAATCCTGTGATCTTTGCTCCCTTCCTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SHASQFSPGTSF*NPVIFAPFLLH
Trigger: ATGGAGAAGGAAGGGAGCAAAGATCACAGGATTCCAGAATGACGTTCCGGGAGAGAACTGAGAGGCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381539.3
CDS CAA 72 bp TCTCCAGTGAATCGCCAATTAATATCTGTCAAGATGTaGACCAGTCCTGTGAAAGAATCTGTGATGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPVNRQLISVKM*TSPVKESVMAS
Trigger: GCTGGCCATCACAGATTCTTTCACAGGACTGGTCAACATCTTGACAGATATTAATTGGCGATTCACTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359791.5
ENST00000360581.6
ENST00000381539.3
ENST00000381553.7
ENST00000396095.6