Pregenerated sensors for NPS (Homo sapiens)
Ensembl gene IDs: ENSG00000214285Ensembl transcript IDs: ENST00000398023.3
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTGTTGTCTGTCAACATGCTCATaGTTTCTGGCCAAGTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: RFPNGCPDNTGHSQSLCCLSTCS*FLAKLK Trigger: TTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAG...ACAACAGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTGTTGTCTGGCAGCATTTCTGTaGTTAAAGATTTTAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RFPNGCPDNTGHSQSLCCLAAFL*LKILKG Trigger: GCCTTTTAAAATCTTTAAGCACAGAAATGCTGCCAG...ACAACAGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| 3UTR-3UTR CCA 90 bp | AATCAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGATGATAAAGAGACGATaGACTTTGAGTACGTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: NQHSLGNRFPNGCPDNTGMIKRR*TLSTSV Trigger: GACTGACGTACTCAAAGTCCATCGTCTCTTTATCAT...CCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CCA 90 bp | AGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTGTTGTTGCTCCTGTCCAATCTaGTTGGGCAGCTGTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RFPNGCPDNTGHSQSLCCCSCPI*LGSCSA Trigger: TGCTGAACAGCTGCCCAACCAGATTGGACAGGAGCA...ACAACAGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR TCA 90 bp | AGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTGTTGTAGAGACGATGGACTTTaGGTACGTCAGTCACACTCT | + |
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Preference number: 4 (lower is better) Translates to: RFPNGCPDNTGHSQSLCCRDDGL*VRQSHS Trigger: AGAGTGTGACTGACGTACTCAAAGTCCATCGTCTCT...ACAACAGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | AGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTGTTGTGAAAAGCTAGTTCTTTaGTCCTGTCCAATCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: RFPNGCPDNTGHSQSLCCEKLVL*SCPIWL Trigger: CAACCAGATTGGACAGGAGCAAAGAACTAGCTTTTC...ACAACAGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | AATCAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCTGTGCCAACTCCATTaGGAAAGGACCTTTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: NQHSLGNRFPNGCPDNTGLCQLH*ERTFSQ Trigger: TTGTGAAAAGGTCCTTTCGCAATGGAGTTGGCACAG...CCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | AGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTGTTGTGAATTACATCTAGAGTaGTCCAGGGATGTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RFPNGCPDNTGHSQSLCCELHLE*SRDVCS Trigger: AGAACAAACATCCCTGGAGCACTCTAGATGTAATTC...ACAACAGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | GGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTCTGGCAGCATTTCTGTaGTTAAAGATTTTAAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GTGFQMAALTTQGTLSLSLAAFL*LKILKG Trigger: GCCTTTTAAAATCTTTAAGCACAGAAATGCTGCCAG...AGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CCA 90 bp | CAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACAGACACCTTAGAAGATaGAACTGGATAACACCAAAA | + |
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Preference number: 4 (lower is better) Translates to: QHSLGNRFPNGCPDNTGHRHLRR*NWITPK Trigger: TTTTGGTGTTATCCAGTTCCATCTTCTAAGGTGTCT...GTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CCA 90 bp | GGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTTTAATCAGCATAGTTTaGGGAACAGGTTTCCAAATG | + |
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Preference number: 4 (lower is better) Translates to: GTGFQMAALTTQGTLSLSLISIV*GTGFQM Trigger: CATTTGGAAACCTGTTCCCCAAACTATGCTGATTAA...AGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR TCA 90 bp | AATCATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAATCCAAATGGCTGCCCTaGCAACACAGGGCACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NHTIVMTVNMLMLSGQVKSKWLP*QHRALS Trigger: TGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGA...TTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CCA 90 bp | CATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAAAGCCCTGTCCAATCTGGTTaGGCAGCTGTTCAGCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: HTIVMTVNMLMLSGQVKSPVQSG*AAVQQN Trigger: ATTCTGCTGAACAGCTGCCCAACCAGATTGGACAGG...GCTTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR TCA 90 bp | AATCAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGAGCTGTTCAGCAGAATaGGAAAGTAATCAGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: NQHSLGNRFPNGCPDNTGSCSAE*ESNQIF Trigger: GAAAATCTGATTACTTTCTCATTCTGCTGAACAGCT...CCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | TATTTGAGAATAGAGAGCATGCCAACACTCAATGATAAAGAGACGATGGACTTTAGGTTTCCAAATGGCTaGCCTGACAACACAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: YLRIESMPTLNDKETMDFRFPNG*PDNTGH Trigger: GTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCT...AAAGTCCATCGTCTCTTTATCATTGAGTGTTGGCATGCTCTCTATTCTCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR TCA 90 bp | CATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAAAGCTCACAAGTGGAAGTTTaGGACAGGTTTGAGACATGT | + |
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Preference number: 4 (lower is better) Translates to: HTIVMTVNMLMLSGQVKSSQVEV*DRFETC Trigger: ACATGTCTCAAACCTGTCTCAAACTTCCACTTGTGA...GCTTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CCA 90 bp | CATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAAAGCAAAACACATGCATTGTaGACAGCGACAGAACTAGGA | + |
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Preference number: 4 (lower is better) Translates to: HTIVMTVNMLMLSGQVKSKTHAL*TATELG Trigger: TCCTAGTTCTGTCGCTGTCCACAATGCATGTGTTTT...GCTTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | AATCATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAATGTCAGGAGTTTCAGTaGAAAGAGTGGGCAGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: NHTIVMTVNMLMLSGQVKCQEFQ*KEWAVF Trigger: AAAGACTGCCCACTCTTTGCACTGAAACTCCTGACA...TTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | ACACTCAATGATAAAGAGACGATGGACTTTGAGTACGTCAGTCACACTCTACAGGATAGGTGGTTTTATTaGCAAATTTCTCACACTTAC | + |
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Preference number: 4 (lower is better) Translates to: TLNDKETMDFEYVSHTLQDRWFY*QISHTY Trigger: GTAAGTGTGAGAAATTTGGCAATAAAACCACCTATC...CTGTAGAGTGTGACTGACGTACTCAAAGTCCATCGTCTCTTTATCATTGAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | AATCATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAACTGTCAACATGCTCATaGTTTCTGGCCAAGTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: NHTIVMTVNMLMLSGQVKLSTCS*FLAKLK Trigger: TTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAG...TTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR GCA 90 bp | AGCAAAAGTGTCCATCCCATTCAGGAAAAAGTTACTAATGGACCACATAAATTGATTCCCCGAGTCCTTTaGACACTTAGTCATGATTTT | + |
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Preference number: 4 (lower is better) Translates to: SKSVHPIQEKVTNGPHKLIPRVL*TLSHDF Trigger: AAAATCATGACTAAGTGTGCAAAGGACTCGGGGAAT...CAATTTATGTGGTCCATTAGTAACTTTTTCCTGAATGGGATGGACACTTTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CCA 90 bp | AGCAAAAGTGTCCATCCCATTCAGGAAAAAGTTACTAATGGACCACATAAATTGATGATAAAGAGACGATaGACTTTGAGTACGTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: SKSVHPIQEKVTNGPHKLMIKRR*TLSTSV Trigger: GACTGACGTACTCAAAGTCCATCGTCTCTTTATCAT...CAATTTATGTGGTCCATTAGTAACTTTTTCCTGAATGGGATGGACACTTTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | GGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACTCTCAGTCTCTCTCCCCCACCCCAAGAATaGAGCCTGTTAAGTCATTTG | + |
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Preference number: 5 (lower is better) Translates to: GTGFQMAALTTQGTLSLSPPPQE*SLLSHL Trigger: CAAATGACTTAACAGGCTCAATTCTTGGGGTGGGGG...AGAGAGACTGAGAGTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | CAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACAGAAAAGCTAGTTCTTaGCTCCTGTCCAATCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: QHSLGNRFPNGCPDNTGHRKASS*LLSNLV Trigger: AACCAGATTGGACAGGAGCAAAGAACTAGCTTTTCT...GTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | CAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGCACAGAACTAGGATGAGATaGAGTTTTACTGAGCTAATC | + |
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Preference number: 5 (lower is better) Translates to: QHSLGNRFPNGCPDNTGHRTRMR*SFTELI Trigger: GATTAGCTCAGTAAAACTCAATCTCATCCTAGTTCT...GTGCCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | ACACTCAATGATAAAGAGACGATGGACTTTGAGTACGTCAGTCACACTCTACAGTCCTGTCCAATCTGGTaGGGCAGCTGTTCAGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TLNDKETMDFEYVSHTLQSCPIW*GSCSAE Trigger: TTCTGCTGAACAGCTGCCCAACCAGATTGGACAGGA...CTGTAGAGTGTGACTGACGTACTCAAAGTCCATCGTCTCTTTATCATTGAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | CATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAAAGCCCTGTGCCAACTCCATaGCGAAAGGACCTTTTCACA | + |
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Preference number: 5 (lower is better) Translates to: HTIVMTVNMLMLSGQVKSPVPTP*RKDLFT Trigger: TGTGAAAAGGTCCTTTCGCAATGGAGTTGGCACAGG...GCTTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | AATCAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGGTGCTCCAGGGATGTTaGTTCTTGGTATCAATTAAT | + |
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Preference number: 5 (lower is better) Translates to: NQHSLGNRFPNGCPDNTGVLQGC*FLVSIN Trigger: ATTAATTGATACCAAGAACAAACATCCCTGGAGCAC...CCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | AATCAGCATAGTTTGGGGAACAGGTTTCCAAATGGCTGCCCTGACAACACAGGGACTGAGCTAATCATTTaGGACTTCCCAAAATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NQHSLGNRFPNGCPDNTGTELII*DFPKSV Trigger: TACAGATTTTGGGAAGTCCAAAATGATTAGCTCAGT...CCCTGTGTTGTCAGGGCAGCCATTTGGAAACCTGTTCCCCAAACTATGCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | CATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAAAGCAAGAGACGATGGACTTaGAGTACGTCAGTCACACTC | + |
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Preference number: 5 (lower is better) Translates to: HTIVMTVNMLMLSGQVKSKRRWT*STSVTL Trigger: GAGTGTGACTGACGTACTCAAAGTCCATCGTCTCTT...GCTTTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | ACACTCAATGATAAAGAGACGATGGACTTTGAGTACGTCAGTCACACTCTACAGACCAAAACACATGCATaGTGGACAGCGACAGAACTA | + |
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Preference number: 5 (lower is better) Translates to: TLNDKETMDFEYVSHTLQTKTHA*WTATEL Trigger: TAGTTCTGTCGCTGTCCACAATGCATGTGTTTTGGT...CTGTAGAGTGTGACTGACGTACTCAAAGTCCATCGTCTCTTTATCATTGAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | TATTTGAGAATAGAGAGCATGCCAACACTCAATGATAAAGAGACGATGGACTTTGTCTCTCTGTTGTTGTaGTTACTGGCAGCATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: YLRIESMPTLNDKETMDFVSLLL*LLAAFL Trigger: CAGAAATGCTGCCAGTAACAACAACAACAGAGAGAC...AAAGTCCATCGTCTCTTTATCATTGAGTGTTGGCATGCTCTCTATTCTCAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | AGCAAAAGTGTCCATCCCATTCAGGAAAAAGTTACTAATGGACCACATAAATTGCCATTCACCTTAATTTaGGTTAACTTCACAAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: SKSVHPIQEKVTNGPHKLPFTLI*VNFTSP Trigger: GGGGCTTGTGAAGTTAACCAAAATTAAGGTGAATGG...CAATTTATGTGGTCCATTAGTAACTTTTTCCTGAATGGGATGGACACTTTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS-3UTR CAA 90 bp | AATCATACTATCGTGATGACTGTCAACATGCTCATGCTTTCTGGCCAAGTTAAAATTAATCAGCATAGTTaGGGGAACAGGTTTCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: NHTIVMTVNMLMLSGQVKINQHS*GNRFPN Trigger: ATTTGGAAACCTGTTCCCCAAACTATGCTGATTAAT...TTTAACTTGGCCAGAAAGCATGAGCATGTTGACAGTCATCACGATAGTATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS CAA 72 bp | ATCTTCTCCAAAATTGGCTTTAGAAAAGCTAGTTCTTaGCTCCTGTCCAATCTGGTTGGGCAGCTGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IFSKIGFRKASS*LLSNLVGQLFS Trigger: GCTGAACAGCTGCCCAACCAGATTGGACAGGAGCAAAGAACTAGCTTTTCTAAAGCCAATTTTGGAGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS CAA 90 bp | TTCACAAACATCTTCTCCAAAATTGGCTTTAGAAAAGCTAGTTCTTaGCTCCTGTCCAATCTGGTTGGGCAGCTGTTCAGCAGAATGAGA | + |
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Preference number: 6 (lower is better) Translates to: FTNIFSKIGFRKASS*LLSNLVGQLFSRMR Trigger: TCTCATTCTGCTGAACAGCTGCCCAACCAGATTGGACAGGAGCAAAGAACTAGCTTTTCTAAAGCCAATTTTGGAGAAGATGTTTGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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| CDS CCA 72 bp | GTAATCAGATTTTCCAGACACCTTAGAAGATGGAACTaGATAACACCAAAACACATGCATTGTGGACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: VIRFSRHLRRWN*ITPKHMHCGQR Trigger: TCGCTGTCCACAATGCATGTGTTTTGGTGTTATCCAGTTCCATCTTCTAAGGTGTCTGGAAAATCTGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398023.3 |
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