RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000113389

Ensembl transcript IDs: ENST00000265074.13, ENST00000326958.5, ENST00000415167.2, ENST00000434067.6, ENST00000506712.1, ENST00000507141.1, ENST00000509104.5

Found 736 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGGGAGCAACAGAAGCGGACTTCTCCAGGGAAGCACTCACACATaGGCCAGCATCTGGGACAGGCAGCTTGCGCTTACCTTTGCCTCC +
Preference number: 1 (lower is better)
Translates to: GGSNRSGLLQGSTHT*ASIWDRQLALTFAS
Trigger: GGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCCCTGGAGAAGTCCGCTTCTGTTGCTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp AGAAGCGGACTTCTCCAGGGAAGCACTCACACATGGGCCAGCATCTaGGACAGGCAGCTTGCGCTTACCTTTGCCTCCACTGTTACTTGT +
Preference number: 1 (lower is better)
Translates to: RSGLLQGSTHTWASI*DRQLALTFASTVTC
Trigger: ACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCCCTGGAGAAGTCCGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp GGGACAGGCAGCTTGCGCTTACCTTTGCCTCCACTGTTACTTGTGTaGACTACCACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCC +
Preference number: 1 (lower is better)
Translates to: GTGSLRLPLPPLLLV*TTTFIATKGLLRLS
Trigger: GGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp TCACACATGGGCCAGCATCTGGGACAGGCAGCTTGCGCTTACCTTTaGCTCCACTGTTACTTGTGTGAACTACCACCTTCATCGCCACCA +
Preference number: 1 (lower is better)
Translates to: SHMGQHLGQAACAYL*LHCYLCELPPSSPP
Trigger: TGGTGGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp AAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTGGGTaGAGGGGCAGAAGGGGCAGTAAAGACAGTGGCAATGGGCAAAGC +
Preference number: 1 (lower is better)
Translates to: KMLTHPWSDAECGCG*RGRRGSKDSGNGQS
Trigger: GCTTTGCCCATTGCCACTGTCTTTACTGCCCCTTCTGCCCCTCCACCCACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp GCACAGGGAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTaGAACGAACAAACTCACAGCAACTCCATGCTGTTCAGGGGCTAC +
Preference number: 1 (lower is better)
Translates to: AQGTKLRFPGPNTKV*NEQTHSNSMLFRGY
Trigger: GTAGCCCCTGAACAGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp TACTCACAAATTTCTACCTGCATGGGCAAGATGCTGACACATCCTTaGAGTGATGCTGAATGTGGATGTGGGTGGAGGGGCAGAAGGGGC +
Preference number: 1 (lower is better)
Translates to: YSQISTCMGKMLTHP*SDAECGCGWRGRRG
Trigger: GCCCCTTCTGCCCCTCCACCCACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGTAGAAATTTGTGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp GTATGGAGGCCTACTCACAAATTTCTACCTGCATGGGCAAGATGCTaGCACATCCTTGGAGTGATGCTGAATGTGGATGTGGGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: VWRPTHKFLPAWARC*HILGVMLNVDVGGG
Trigger: CCCTCCACCCACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGTAGAAATTTGTGAGTAGGCCTCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp TGTAGGTCGAGGGGCCTAATTTGGGCTGACATTTACTCTCATGTCTaGATCCACTCAGGATCTGAGTGCTTTGTGTCCCAAGAAACACAG +
Preference number: 1 (lower is better)
Translates to: CRSRGLIWADIYSHV*IHSGSECFVSQETQ
Trigger: CTGTGTTTCTTGGGACACAAAGCACTCAGATCCTGAGTGGATGCAGACATGAGAGTAAATGTCAGCCCAAATTAGGCCCCTCGACCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp TTCTTCCCCCGAGGAAGTATGGAGGCCTACTCACAAATTTCTACCTaGATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGT +
Preference number: 1 (lower is better)
Translates to: FFPRGSMEAYSQIST*MGKMLTHPWSDAEC
Trigger: ACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGTAGAAATTTGTGAGTAGGCCTCCATACTTCCTCGGGGGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp GTCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATaGACAGGGAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGT +
Preference number: 1 (lower is better)
Translates to: VTRSIPCPLGFNYPP*TGNKAQIPRTQHKG
Trigger: ACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp GGGGTCACAGAATTGGTCTGTCACAAGGTCTATCCCATGTCCTCTTaGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCC +
Preference number: 1 (lower is better)
Translates to: GVTELVCHKVYPMSS*FQLSTMHREQSSDS
Trigger: GGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGACAGACCAATTCTGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp CACTGTTACTTGTGTGAACTACCACCTTCATCGCCACCAAGGGATTaGTCAGACTCTCCTGTTTCCTCACTAGACATGCCTTTTAATAGA +
Preference number: 1 (lower is better)
Translates to: HCYLCELPPSSPPRD*SDSPVSSLDMPFNR
Trigger: TCTATTAAAAGGCATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGTGGTAGTTCACACAAGTAACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp ATGGACACAATCCTTCCTTGCTGTTTCACTTTGGGGAGTCCCAAGTaGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCT +
Preference number: 1 (lower is better)
Translates to: MDTILPCCFTLGSPK*YNALLAWILLLKLS
Trigger: AGAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGGAAGGATTGTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp AGTGACGCCACTGGAACCTACTTTCTGAATCCATCACTATCTGCATaGGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTCT +
Preference number: 1 (lower is better)
Translates to: SDATGTYFLNPSLSA*DLCNGLHLIVDCMS
Trigger: AGACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAGTGGCGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp ATACTGGCTTACAAGAAGGTAGTGACGCCACTGGAACCTACTTTCTaGATCCATCACTATCTGCATGAGATCTATGCAATGGCCTTCATC +
Preference number: 1 (lower is better)
Translates to: ILAYKKVVTPLEPTF*IHHYLHEIYAMAFI
Trigger: GATGAAGGCCATTGCATAGATCTCATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAGTGGCGTCACTACCTTCTTGTAAGCCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp ACAAGCTCTCCAATTCAAGTAAGTAAGATGGACACAATCCTTCCTTaGTGTTTCACTTTGGGGAGTCCCAAGTGGTACAACGCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: TSSPIQVSKMDTILP*CFTLGSPKWYNALL
Trigger: AAGCAAAGCGTTGTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGGAAGGATTGTGTCCATCTTACTTACTTGAATTGGAGAGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp GACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATaGTGTTCAGGGGCTACTTCATTGTTGTCTTATAAGATGTTGAAG +
Preference number: 1 (lower is better)
Translates to: DPTQRSATNKLTATP*CSGATSLLSYKMLK
Trigger: CTTCAACATCTTATAAGACAACAATGAAGTAGCCCCTGAACAGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp TCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTaGAAAGATGACTGGAAAGAAAGCTTGCATGTGTGGTTAACAGGC +
Preference number: 1 (lower is better)
Translates to: SSCLSLLRKILAQPY*KDDWKESLHVWLTG
Trigger: GCCTGTTAACCACACATGCAAGCTTTCTTTCCAGTCATCTTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR TCA 90 bp TTCCTTTGCATCCAGCATGGAGAACTACAACATAGTTGTTTCAGTTaGTCACACTTAATTCTTTTATCACGCCCTCTCAGCTGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: FLCIQHGELQHSCFS*SHLILLSRPLSCLP
Trigger: TGGGAGGCAGCTGAGAGGGCGTGATAAAAGAATTAAGTGTGATCAACTGAAACAACTATGTTGTAGTTCTCCATGCTGGATGCAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 90 bp GAACTTCTGGAGTTTGCCCTTCTTGCCTTCTTCTTCCATCCTTTTTaGAATTCGACACTTTTTCCTTTGCATCCAGCATGGAGAACTACA +
Preference number: 1 (lower is better)
Translates to: ELLEFALLAFFFHPF*NSTLFPLHPAWRTT
Trigger: TGTAGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGGGCAAACTCCAGAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp TGGGCAAAGCTACCCTCTTCTATTTCTGTTAGAGGATCAAGCTTCTaGTTCTTCTTGCTGAGTATGGCTGTTGAAGGGGCACTAAATTAT +
Preference number: 1 (lower is better)
Translates to: WAKLPSSISVRGSSF*FFLLSMAVEGALNY
Trigger: ATAATTTAGTGCCCCTTCAACAGCCATACTCAGCAAGAAGAATCAGAAGCTTGATCCTCTAACAGAAATAGAAGAGGGTAGCTTTGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 90 bp CTCAAACTCTCTTCCTGCACTAGAACTTCTGGAGTTTGCCCTTCTTaGCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTT +
Preference number: 1 (lower is better)
Translates to: LKLSSCTRTSGVCPS*LLLPSFLEFDTFSF
Trigger: AAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGGGCAAACTCCAGAAGTTCTAGTGCAGGAAGAGAGTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp TATGAGACACTGAAAAAGACAGGGAGGAAATCCTTTTTCAAGATATaGAGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAA +
Preference number: 1 (lower is better)
Translates to: YETLKKTGRKSFFKI*SQNLNVDIGQRSPQ
Trigger: TTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACTTCATATCTTGAAAAAGGATTTCCTCCCTGTCTTTTTCAGTGTCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 90 bp TCTTTTCCCATGCATTTCTCTCTTCCCTCCATTAAACATGGGTTCTaGAATGTGAAGAATTATAGTAGGGTCTGTAGAACCATTCCTGTG +
Preference number: 1 (lower is better)
Translates to: SFPMHFSLPSIKHGF*NVKNYSRVCRTIPV
Trigger: CACAGGAATGGTTCTACAGACCCTACTATAATTCTTCACATTTCAGAACCCATGTTTAATGGAGGGAAGAGAGAAATGCATGGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp CATCTGGGACAGGCAGCTTGCGCTTACCTTTGCCTCCACTGTTACTaGTGTGAACTACCACCTTCATCGCCACCAAGGGATTGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: HLGQAACAYLCLHCY*CELPPSSPPRDCSD
Trigger: GTCTGAGCAATCCCTTGGTGGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTGAACGCTTTTATTTCTaGGTCTCCCCCTACCTGGCC +
Preference number: 2 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHAERFYF*VSPYLA
Trigger: GGCCAGGTAGGGGGAGACTCAGAAATAAAAGCGTTC...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTGCATGGGCAAGATGCTaGCACATCCTTGGAGTGATG +
Preference number: 2 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHAAWARC*HILGVM
Trigger: CATCACTCCAAGGATGTGTCAGCATCTTGCCCATGC...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCACATGGGCCAGCATCTaGGACAGGCAGCTTGCGCTT +
Preference number: 2 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPTWASI*DRQLAL
Trigger: AAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCGGAAGCACTCACACATaGGCCAGCATCTGGGACAGG +
Preference number: 2 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLGSTHT*ASIWDR
Trigger: CCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCC...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCTTGGGGAGTCCCAAGTaGTACAACGCTTTGCTTGCC +
Preference number: 2 (lower is better)
Translates to: EAGPSEHHHLILSASTIALGSPK*YNALLA
Trigger: GGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAA...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCCTGGAGGCAGATGGTaGTTAATCATAATTCCTGAG +
Preference number: 2 (lower is better)
Translates to: EAGPSEHHHLILSASTIAPGGRW*LIIIPE
Trigger: CTCAGGAATTATGATTAATCACCATCTGCCTCCAGG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCCAACAAAGTTGTTCTTaGGGGAAAAGGGCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPQQSCS*GKRAAS
Trigger: GGAGGCAGCCCTTTTCCCTCAAGAACAACTTTGTTG...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCCCACTGTTACTTGTGTaGACTACCACCTTCATCGCC +
Preference number: 2 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPPLLLV*TTTFIA
Trigger: GGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGG...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCCCACTGTTACTTGTGTaGACTACCACCTTCATCGCC +
Preference number: 2 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLPLLLV*TTTFIA
Trigger: GGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGG...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCACCTGTGGTCAGTCTTaGGGGAGAGATGGACTCTAT +
Preference number: 2 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPTCGQS*GRDGLY
Trigger: ATAGAGTCCATCTCTCCCTCAAGACTGACCACAGGT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTGGGCCTAATTTGGGCTaGCATTTACTCTCATGTCTG +
Preference number: 2 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCGPNLG*HLLSCL
Trigger: CAGACATGAGAGTAAATGTCAGCCCAAATTAGGCCC...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGATCGCCACCAAGGGATTaGTCAGACTCTCCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGSPPRD*SDSPVS
Trigger: GGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGA...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTGGAAGCACTCACACATaGGCCAGCATCTGGGACAGG +
Preference number: 2 (lower is better)
Translates to: HYLHEIYAMAFISLLTACGSTHT*ASIWDR
Trigger: CCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCC...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGATATATTTGTTTGTCATaGGATGAAAGGCCTGGAGGC +
Preference number: 2 (lower is better)
Translates to: DIGQRSPQPQTCPPALERYICLS*DERPGG
Trigger: GCCTCCAGGCCTTTCATCTCATGACAAACAAATATA...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAGACGGTGCACTCTCATaGCAGCTTCCCATTCCTCCC +
Preference number: 2 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFADGALS*QLPIPP
Trigger: GGGAGGAATGGGAAGCTGTCATGAGAGTGCACCGTC...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCAGCATCTACGCATTTTaGCCTGTATCAATGTCAGCT +
Preference number: 2 (lower is better)
Translates to: EAGPSEHHHLILSASTIASIYAF*PVSMSA
Trigger: AGCTGACATTGATACAGGTCAAAATGCGTAGATGCT...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCCTTCATCTCATTGTTaGCTGCATGTCTTACACACA +
Preference number: 2 (lower is better)
Translates to: EAGPSEHHHLILSASTIAPSSHC*LHVLHT
Trigger: TGTGTGTAAGACATGCAGTCAACAATGAGATGAAGG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAATGGAATGTGCATGCTaGACACCAAAGCCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGMECAC*TPKPGL
Trigger: CAAGCCTGGCTTTGGTGTTCAGCATGCACATTCCAT...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTACAGGTATTCATGGATaGCTACAAAGTTCTGTGGAG +
Preference number: 2 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHATGIHG*LQSSVE
Trigger: CTCCACAGAACTTTGTAGGCATCCATGAATACCTGT...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCTCAAACTCTCTTCCTaGACTAGAACTTCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: EAGPSEHHHLILSASTIALKLSS*TRTSGV
Trigger: AACTCCAGAAGTTCTAGTGCAGGAAGAGAGTTTGAG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTTCTAGCTGTGGGGTATaGCTGCAAGAGATATTTATG +
Preference number: 2 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHASSCGV*LQEIFM
Trigger: CATAAATATCTCTTGCAGGCATACCCCACAGCTAGA...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp AGGGGTCACAGAATTGGTCTGTCACAAGGTCTATCCCATGTCCTCTaGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTC +
Preference number: 2 (lower is better)
Translates to: RGHRIGLSQGLSHVL*VSIIHHAQGTKLRF
Trigger: GAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGACAGACCAATTCTGTGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCCCATCACTATCTGCATaGGATCTATGCAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLPSLSA*DLCNGL
Trigger: AAGGCCATTGCATAGATCTCATGCAGATAGTGATGG...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAGGGCCTAATTTGGGCTaGCATTTACTCTCATGTCTG +
Preference number: 2 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGGPNLG*HLLSCL
Trigger: CAGACATGAGAGTAAATGTCAGCCCAAATTAGGCCC...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCGCAGCAATTAGCATTTaGCTGTGGCCAAGGGAAAAA +
Preference number: 2 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLAAISI*LWPREK
Trigger: TTTTTCCCTTGGCCACAGCCAAATGCTAATTGCTGC...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCCCTGGAGGCAGATGGTaGTTAATCATAATTCCTGAG +
Preference number: 2 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLPGGRW*LIIIPE
Trigger: CTCAGGAATTATGATTAATCACCATCTGCCTCCAGG...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTTTCTTCAGAGAAATGTaGTGTTTTCAGGGACCTTCT +
Preference number: 2 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCFFREM*CFQGPS
Trigger: AGAAGGTCCCTGAAAACATCACATTTCTCTGAAGAA...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCATTTACTCTCATGTCTaGATCCACTCAGGATCTGAG +
Preference number: 2 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLIYSHV*IHSGSE
Trigger: CTCAGATCCTGAGTGGATGCAGACATGAGAGTAAAT...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCGCTGTGGGGTATGCCTaGAAGAGATATTTATGGAAT +
Preference number: 2 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPAVGYA*KRYLWN
Trigger: ATTCCATAAATATCTCTTGCAGGCATACCCCACAGC...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACCTTCATCTCATTGTTaGCTGCATGTCTTACACACA +
Preference number: 2 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGPSSHC*LHVLHT
Trigger: TGTGTGTAAGACATGCAGTCAACAATGAGATGAAGG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCTATCCTTGTGTGAAATaGTCCCAAAAGCCATCAAGA +
Preference number: 2 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPYPCVK*SQKPSR
Trigger: TCTTGATGGCTTTTGGGAGCATTTCACACAAGGATA...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp AGAACTTCTGGAGTTTGCCCTTCTTGCCTTCTTCTTCCATCCTTTTaGGAATTCGACACTTTTTCCTTTGCATCCAGCATGGAGAACTAC +
Preference number: 2 (lower is better)
Translates to: RTSGVCPSCLLLPSF*EFDTFSFASSMENY
Trigger: GTAGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGGGCAAACTCCAGAAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp ATTCAAGTAAGTAAGATGGACACAATCCTTCCTTGCTGTTTCACTTaGGGGAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTA +
Preference number: 2 (lower is better)
Translates to: IQVSKMDTILPCCFT*GSPKWYNALLAWIL
Trigger: TAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGGAAGGATTGTGTCCATCTTACTTACTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp CATCACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTaGACTGCATGTCTTACACACACACACCCAAAATCAGCCATAACT +
Preference number: 2 (lower is better)
Translates to: HHYLHEIYAMAFISL*TACLTHTHPKSAIT
Trigger: AGTTATGGCTGATTTTGGGTGTGTGTGTGTAAGACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp ATCCATCACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATaGTTGACTGCATGTCTTACACACACACACCCAAAATCAGCCATA +
Preference number: 2 (lower is better)
Translates to: IHHYLHEIYAMAFIS*LTACLTHTHPKSAI
Trigger: TATGGCTGATTTTGGGTGTGTGTGTGTAAGACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTGATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGATTTTATATCCTTGTGTaGAATGCTCCCAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGFYILV*NAPKSH
Trigger: ATGGCTTTTGGGAGCATTTCACACAAGGATATAAAA...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCATCTGATTCTTCTTGCTaGGTATGGCTGTTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPSDSSC*VWLLKG
Trigger: CCCCTTCAACAGCCATACTCAGCAAGAAGAATCAGA...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTATTAGCATTTGGCTGTaGCCAAGGGAAAAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: HYLHEIYAMAFISLLTACISIWL*PREKGK
Trigger: TTTCCCTTTTTCCCTTGGCCACAGCCAAATGCTAAT...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp TGCAGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCTATTGGAAAGATGACTaGAAAGAAAGCTTGCATGTG +
Preference number: 2 (lower is better)
Translates to: CSGYSNRAIHSLKLLDSSYWKDD*KESLHV
Trigger: CACATGCAAGCTTTCTTTCCAGTCATCTTTCCAATA...GCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR-3UTR TCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTTGCTCAAAATGTTATTaGGGAAAGACCCCAGTTATG +
Preference number: 2 (lower is better)
Translates to: HYLHEIYAMAFISLLTACCSKCY*GKTPVM
Trigger: CATAACTGGGGTCTTTCCTCAATAACATTTTGAGCA...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp AGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCAATACCATATTGGAAAGATaGCTGGAAAGAAAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: SGYSNRAIHSLKLLDSSNTILER*LERKLA
Trigger: TGCAAGCTTTCTTTCCAGTCATCTTTCCAATATGGT...ATTGCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR-3UTR CCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTTCTTCCATCCTTTTTaGAATTCGACACTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLFFHPF*NSTLFP
Trigger: AGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATGCTCAAAATGTTATTaGGGAAAGACCCCAGTTATG +
Preference number: 2 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFACSKCY*GKTPVM
Trigger: CATAACTGGGGTCTTTCCTCAATAACATTTTGAGCA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTCAAGAAAAGACAAGTTaGTGGTTCTTCAGAGAAATG +
Preference number: 2 (lower is better)
Translates to: HYLHEIYAMAFISLLTACQEKTS*WFFREM
Trigger: CATTTCTCTGAAGAACCATCAACTTGTCTTTTCTTG...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATGTCATTTCTGTGCTTaGTGTCAAGTAGTAACTCTC +
Preference number: 2 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFACHFCA*CQVVTL
Trigger: GAGAGTTACTACTTGACAGCAAGCACAGAAATGACA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACGACACTTTTTCCTTTaGATCCAGCATGGAGAACTA +
Preference number: 2 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPRHFFL*IQHGEL
Trigger: TAGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTCCCCCGAGGAAGTATaGAGGCCTACTCACAAATTT +
Preference number: 2 (lower is better)
Translates to: EKFEQTPIQHLLEVILILSPEEV*RPTHKF
Trigger: AAATTTGTGAGTAGGCCTCCATACTTCCTCGGGGGA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTATTACAGGTATTCATaGATGCCTACAAAGTTCTGT +
Preference number: 2 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMYYRYS*MPTKFC
Trigger: ACAGAACTTTGTAGGCATCCATGAATACCTGTAATA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGATTTACTCTCATGTCTaGATCCACTCAGGATCTGAG +
Preference number: 2 (lower is better)
Translates to: EKFEQTPIQHLLEVILILIYSHV*IHSGSE
Trigger: CTCAGATCCTGAGTGGATGCAGACATGAGAGTAAAT...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 90 bp CTGCCTCCCTTTATAAAACTGTTTAATTCTAATAACTTTTTACTCTaGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCA +
Preference number: 2 (lower is better)
Translates to: LPPFIKLFNSNNFLL*ILKLMIWPELEGVS
Trigger: TGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAAAAAGTTATTAGAATTAAACAGTTTTATAAAGGGAGGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR GCA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTTATCCTTGTGTGAAATaGTCCCAAAAGCCATCAAGA +
Preference number: 2 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSYPCVK*SQKPSR
Trigger: TCTTGATGGCTTTTGGGAGCATTTCACACAAGGATA...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR TCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTTTTATATCCTTGTGTaGAATGCTCCCAAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: EKFEQTPIQHLLEVILILFYILV*NAPKSH
Trigger: ATGGCTTTTGGGAGCATTTCACACAAGGATATAAAA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCAGATTGAAGTTATCTaGGGAACGCTTTTATTTCTG +
Preference number: 2 (lower is better)
Translates to: EKFEQTPIQHLLEVILILQIEVI*GTLLFL
Trigger: CAGAAATAAAAGCGTTCCCCAGATAACTTCAATCTG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTATTACAGGTATTCATaGATGCCTACAAAGTTCTGT +
Preference number: 2 (lower is better)
Translates to: EKFEQTPIQHLLEVILILYYRYS*MPTKFC
Trigger: ACAGAACTTTGTAGGCATCCATGAATACCTGTAATA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 72 bp CTTCTCCAGGGAAGCACTCACACATGGGCCAGCATCTaGGACAGGCAGCTTGCGCTTACCTTTGCCTCCACT +
Preference number: 3 (lower is better)
Translates to: LLQGSTHTWASI*DRQLALTFAST
Trigger: AGTGGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCCCTGGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp GGCCAGCATCTGGGACAGGCAGCTTGCGCTTACCTTTaGCTCCACTGTTACTTGTGTGAACTACCACCTTCA +
Preference number: 3 (lower is better)
Translates to: GQHLGQAACAYL*LHCYLCELPPS
Trigger: TGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCTGCCTGTCCCAGATGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 72 bp ATTTCTACCTGCATGGGCAAGATGCTGACACATCCTTaGAGTGATGCTGAATGTGGATGTGGGTGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: ISTCMGKMLTHP*SDAECGCGWRG
Trigger: GCCCCTCCACCCACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGTAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCCTTGCTGTTTCACTTaGGGGAGTCCCAAGTGGTAC +
Preference number: 3 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCPCCFT*GSPKWY
Trigger: GTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp AGCTTGCGCTTACCTTTGCCTCCACTGTTACTTGTGTaGACTACCACCTTCATCGCCACCAAGGGATTGCTC +
Preference number: 3 (lower is better)
Translates to: SLRLPLPPLLLV*TTTFIATKGLL
Trigger: GAGCAATCCCTTGGTGGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp AGCCAGGCTTGTTGGAGTTTATGCACATCACAGGCTTaGACTTCCCCGAGAGCAAGTGTGGTCAGGTTAGCA +
Preference number: 3 (lower is better)
Translates to: SQACWSLCTSQA*TSPRASVVRLA
Trigger: TGCTAACCTGACCACACTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCATAAACTCCAACAAGCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCATGCACATCACAGGCTaGAACTTCCCCGAGAGCAAG +
Preference number: 3 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPMHITG*NFPESK
Trigger: CTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCAT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTACACCAAAGCCAGGCTaGTTGGAGTTTATGCACATC +
Preference number: 3 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHATPKPG*LEFMHI
Trigger: GATGTGCATAAACTCCAACAAGCCTGGCTTTGGTGT...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp TTGTGTGAACTACCACCTTCATCGCCACCAAGGGATTaGTCAGACTCTCCTGTTTCCTCACTAGACATGCCT +
Preference number: 3 (lower is better)
Translates to: LCELPPSSPPRD*SDSPVSSLDMP
Trigger: AGGCATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGTGGTAGTTCACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCAGCTTGCGCTTACCTTaGCCTCCACTGTTACTTGTG +
Preference number: 3 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPSLRLP*PPLLLV
Trigger: CACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCTCGACACTTTTTCCTTaGCATCCAGCATGGAGAACT +
Preference number: 3 (lower is better)
Translates to: EAGPSEHHHLILSASTIASTLFP*HPAWRT
Trigger: AGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCGA...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp CGAGGAAGTATGGAGGCCTACTCACAAATTTCTACCTaGATGGGCAAGATGCTGACACATCCTTGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: RGSMEAYSQIST*MGKMLTHPWSD
Trigger: ATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGTAGAAATTTGTGAGTAGGCCTCCATACTTCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp ACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTaGAACGAACAAACTCACAGCAACTCCATGCTGTTC +
Preference number: 3 (lower is better)
Translates to: TKLRFPGPNTKV*NEQTHSNSMLF
Trigger: GAACAGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCGCCCCTTCTGTTTCATaGATGTCTTTCAACCCGTCT +
Preference number: 3 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLAPSVS*MSFNPS
Trigger: AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGC...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp CTGTGGGGTATGCCTGCAAGAGATATTTATGGAATGTaGATGCTGAACACCAAAGCCAGGCTTGTTGGAGTT +
Preference number: 3 (lower is better)
Translates to: LWGMPARDIYGM*MLNTKARLVGV
Trigger: AACTCCAACAAGCCTGGCTTTGGTGTTCAGCATGCACATTCCATAAATATCTCTTGCAGGCATACCCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp TCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATaGACAGGGAACAAAGCTCAGATTCCCAGGACCCAA +
Preference number: 3 (lower is better)
Translates to: SIPCPLGFNYPP*TGNKAQIPRTQ
Trigger: TTGGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 72 bp ATCCTTCCTTGCTGTTTCACTTTGGGGAGTCCCAAGTaGTACAACGCTTTGCTTGCCTGGATTTTACTTCTC +
Preference number: 3 (lower is better)
Translates to: ILPCCFTLGSPK*YNALLAWILLL
Trigger: GAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTATCATTATTGGTTTGTaGTACACTTCACCCATGCTT +
Preference number: 3 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHAIIIGL*YTSPML
Trigger: AAGCATGGGTGAAGTGTACAACAAACCAATAATGAT...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAGAGATCTGGCTCCCATaGAAACACTTCCATTGTGTT +
Preference number: 3 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGEIWLP*KHFHCV
Trigger: AACACAATGGAAGTGTTTCAATGGGAGCCAGATCTC...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp CTTCAGAGAAATGTGATGTTTTCAGGGACCTTCTCATaGAACCTGTGGTCAGTCTTGAGGGAGAGATGGACT +
Preference number: 3 (lower is better)
Translates to: LQRNVMFSGTFS*NLWSVLRERWT
Trigger: AGTCCATCTCTCCCTCAAGACTGACCACAGGTTTCATGAGAAGGTCCCTGAAAACATCACATTTCTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 72 bp GAATTGGTCTGTCACAAGGTCTATCCCATGTCCTCTTaGTTTCAATTATCCACCATGCACAGGGAACAAAGC +
Preference number: 3 (lower is better)
Translates to: ELVCHKVYPMSS*FQLSTMHREQS
Trigger: GCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGACAGACCAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACCTTGCTGTTTCACTTaGGGGAGTCCCAAGTGGTAC +
Preference number: 3 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPPCCFT*GSPKWY
Trigger: GTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCCCAATCCAGCACCTTTaGGAAGTTATTTTAATCCTG +
Preference number: 3 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLPIQHL*EVILIL
Trigger: CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGG...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCTCAGGGGCTACTTCATaGTTGTCTTATAAGATGTTG +
Preference number: 3 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPSGATS*LSYKML
Trigger: CAACATCTTATAAGACAACAATGAAGTAGCCCCTGA...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp GTATGCCTGCAAGAGATATTTATGGAATGTGCATGCTaGACACCAAAGCCAGGCTTGTTGGAGTTTATGCAC +
Preference number: 3 (lower is better)
Translates to: VCLQEIFMECAC*TPKPGLLEFMH
Trigger: GTGCATAAACTCCAACAAGCCTGGCTTTGGTGTTCAGCATGCACATTCCATAAATATCTCTTGCAGGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp CGCCACTGGAACCTACTTTCTGAATCCATCACTATCTaGATGAGATCTATGCAATGGCCTTCATCTCATTGT +
Preference number: 3 (lower is better)
Translates to: RHWNLLSESITI*MRSMQWPSSHC
Trigger: ACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAGTGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp CAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATaGTGTTCAGGGGCTACTTCATTGTTGTCTTATAAG +
Preference number: 3 (lower is better)
Translates to: QRSATNKLTATP*CSGATSLLSYK
Trigger: CTTATAAGACAACAATGAAGTAGCCCCTGAACAGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCCTTCTTCCATCCTTTTaGGAATTCGACACTTTTTCC +
Preference number: 3 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLLLPSF*EFDTFS
Trigger: GGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAG...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp TGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTaGCTGCATGTCTTACACACACACACCCAAAATCAG +
Preference number: 3 (lower is better)
Translates to: CMRSMQWPSSHC*LHVLHTHTQNQ
Trigger: CTGATTTTGGGTGTGTGTGTGTAAGACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp TACAAGAAGGTAGTGACGCCACTGGAACCTACTTTCTaGATCCATCACTATCTGCATGAGATCTATGCAATG +
Preference number: 3 (lower is better)
Translates to: YKKVVTPLEPTF*IHHYLHEIYAM
Trigger: CATTGCATAGATCTCATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAGTGGCGTCACTACCTTCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGGAGTTTAAACTCATGTaGCAGACTACTGGGTGCAAA +
Preference number: 3 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMEFKLM*QTTGCK
Trigger: TTTGCACCCAGTAGTCTGCAACATGAGTTTAAACTC...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp ACTGGAACCTACTTTCTGAATCCATCACTATCTGCATaGGATCTATGCAATGGCCTTCATCTCATTGTTGAC +
Preference number: 3 (lower is better)
Translates to: TGTYFLNPSLSA*DLCNGLHLIVD
Trigger: GTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 72 bp CTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTaGAAAGATGACTGGAAAGAAAGCTTGCATGTGTGG +
Preference number: 3 (lower is better)
Translates to: LSLLRKILAQPY*KDDWKESLHVW
Trigger: CCACACATGCAAGCTTTCTTTCCAGTCATCTTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGATCATTATTGGTTTGTaGTACACTTCACCCATGCTT +
Preference number: 3 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMIIIGL*YTSPML
Trigger: AAGCATGGGTGAAGTGTACAACAAACCAATAATGAT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR TCA 72 bp CTGAAAAAGACAGGGAGGAAATCCTTTTTCAAGATATaGAGTCAGAACCTGAATGTAGACATCGGACAGAGA +
Preference number: 3 (lower is better)
Translates to: LKKTGRKSFFKI*SQNLNVDIGQR
Trigger: TCTCTGTCCGATGTCTACATTCAGGTTCTGACTTCATATCTTGAAAAAGGATTTCCTCCCTGTCTTTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR GCA 72 bp ATAAGTGAAAGTAGTAACCTGAGTTTAAACTCATGTTaGAGACTACTGGGTGCAAAGCAGATACCCAGTAAA +
Preference number: 3 (lower is better)
Translates to: ISESSNLSLNSC*RLLGAKQIPSK
Trigger: TTTACTGGGTATCTGCTTTGCACCCAGTAGTCTGCAACATGAGTTTAAACTCAGGTTACTACTTTCACTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CCA 72 bp AGAAAAATTTTGGCACAACCATATTGGAAAGATGACTaGAAAGAAAGCTTGCATGTGTGGTTAACAGGCAGT +
Preference number: 3 (lower is better)
Translates to: RKILAQPYWKDD*KESLHVWLTGS
Trigger: ACTGCCTGTTAACCACACATGCAAGCTTTCTTTCCAGTCATCTTTCCAATATGGTTGTGCCAAAATTTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR-3UTR CAA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAATGCTCAAAATGTTATaGAGGAAAGACCCCAGTTAT +
Preference number: 3 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPMLKML*RKDPSY
Trigger: ATAACTGGGGTCTTTCCTCAATAACATTTTGAGCAT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR-3UTR CAA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCCGCATTTTATATCCTaGTGTGAAATGCTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: EKFEQTPIQHLLEVILILPHFIS*CEMLPK
Trigger: TTTTGGGAGCATTTCACACAAGGATATAAAATGCGG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATCCACCTGGAAGCGAGTaGCCGGCGGCAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHPPGSE*PAAEAA
Trigger: GGCGGCTTCTGCCGCCGGGCACTCGCTTCCAGGTGG...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTGCGCGGCTCCAGTGGTaGTGGCGGAACAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAARLQW*WRNRAS
Trigger: GCTCGCCCTGTTCCGCCACCACCACTGGAGCCGCGC...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGCCTCCCAGTCCCGTTaGCCTCCACGCTGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHASQSR*PPRCAE
Trigger: CTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATCAGGTCCCAGTGCGATaGAAGCCGGGCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHQVPVR*KPGHWR
Trigger: GCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTG...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCGCACGGGGAGAAAGTaGGCACCAGCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIARTGRK*APAETA
Trigger: TGCCGTCTCTGCTGGTGCTCACTTTCTCCCCGTGCG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCCGGGCCACTGGCGCTaGTGCATACTCGCACACTGG +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCPGHWR*CILAHW
Trigger: CCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCGTCGCTGTAGACCAGTaGAGCGCGGCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAVAVDQ*SAAPVV
Trigger: CACCACTGGAGCCGCGCTGCACTGGTCTACAGCGAC...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACGGGCGCCACGCGCGTaGGGTGCGAGTACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGRAPRA*GASTQS
Trigger: ACTCTGAGTACTCGCACCTCACGCGCGTGGCGCCCG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGATGTGCGCCACCAGCATaGTGCTCCGGATGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERCAPPA*CSGWCH
Trigger: GTGACACCATCCGGAGCATCATGCTGGTGGCGCACA...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGCGCGGGGCGAGCACCTaGCCTTCCTGGTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMRGAST*PSWSLG
Trigger: GCCGAGGGACCAGGAAGGTCAGGTGCTCGCCCCGCG...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326958.5
CDS-3UTR GCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCGCCACGCGCGTGAGGTaGGAGTACTCAGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAATRVR*EYSESL
Trigger: CAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGC...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCACCTCGATCTTCTGTaGCGGCAGCGCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAHLDLL*RQRLSL
Trigger: GAGAGAGAGGCGCTGCCGCCACAGAAGATCGAGGTG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATTCAGAGTCCTTGTGCTaGAAGCCAGCGGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHSESLC*KPAASA
Trigger: GGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGA...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCCAGCCCCCTCCCCCTaGGCCACGCAGGTTTGCGCT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISPAPSP*ATQVCA
Trigger: AGCGCAAACCTGCGTGGCCCAGGGGGAGGGGGCTGG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCCGGCCGCACCCGGGTaGGTGAAAACAAGTACGAGT +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCPAAPG*VKTSTS
Trigger: ACTCGTACTTGTTTTCACTCACCCGGGTGCGGCCGG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCGGACCCCCTCGAGGGTaGAGTAGCAGTTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLGPPRG*SSSSAP
Trigger: TGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCC...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTTCATCTCGCCCATCTTaGCGTAGGCGGGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCSSRPS*RRRAPR
Trigger: GCGTGGCGCCCGCCTACGCCAAGATGGGCGAGATGA...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp TGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAAGATGACTGGGCGCGGCTCCAGTGGTaGTGGCGGAACAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: CLSLLRKILAQPYWKDDWARLQW*WRNRAS
Trigger: GCTCGCCCTGTTCCGCCACCACCACTGGAGCCGCGC...CCAGTCATCTTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGGCAGCGCGGCTCCAGTaGTGGTGGCGGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMAARLQ*WWRNRA
Trigger: CGCCCTGTTCCGCCACCACCACTGGAGCCGCGCTGC...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp CAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAAGCAGCGCGGCTCCAGTaGTGGTGGCGGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QSSCLSLLRKILAQPYWKAARLQ*WWRNRA
Trigger: CGCCCTGTTCCGCCACCACCACTGGAGCCGCGCTGC...TTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATTGCAAACCCTCCTCCTaGAAGACCTCGTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHCKPSS*KTSWTP
Trigger: GGGGGTCCACGAGGTCTTCCAGGAGGAGGGTTTGCA...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTCTGTCCTCAGTAGAGTaGCTGTCTGGAGGGACGAGT +
Preference number: 4 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHALSSVE*LSGGTS
Trigger: ACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAG...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGCGCGGGGCGAGCACCTaGCCTTCCTGGTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPRGAST*PSWSLG
Trigger: GCCGAGGGACCAGGAAGGTCAGGTGCTCGCCCCGCG...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAACCGCAAGAAAGAGCTTaGCCTCGCCGCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKPQERA*PRRRRL
Trigger: GAGTCGGCGGCGGCGAGGGCAAGCTCTTTCTTGCGG...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTGCAGAGACGGCATCGTaGCGCAAGAAAGAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCAETAS*RKKELA
Trigger: GGCAAGCTCTTTCTTGCGGCACGATGCCGTCTCTGC...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTTCACGCCCTCTCAGCTaGCTCCCAGCTCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCSRPLS*LPAPIS
Trigger: AGAAATGGGAGCTGGGAGGCAGCTGAGAGGGCGTGA...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAATCGCGGACCTGGTGTaGCCGGCTGGCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKIADLV*PAGPGV
Trigger: GACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGAT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCTGCATACTCGCACACTaGCCCCAGGATAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIACILAH*PQDKVW
Trigger: CCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCA...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCCCCAGCCGACAGCATaGGCAGGTCCCAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISPQPTA*AGPSAM
Trigger: CATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAACGGCTCCAGTGGTGGTaGCGGAACAGGGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKRLQWW*RNRASI
Trigger: GATGCTCGCCCTGTTCCGCCACCACCACTGGAGCCG...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGGCTCCATCGCGGACCTaGTGTGCCCGGCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPAPSRT*CARLAR
Trigger: CCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGC...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
3UTR CAA 72 bp CAGGCAGCTTGCGCTTACCTTTGCCTCCACTGTTACTaGTGTGAACTACCACCTTCATCGCCACCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: QAACAYLCLHCY*CELPPSSPPRD
Trigger: ATCCCTTGGTGGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCGCATGGGCAAGATGCTaGCACATCCTTGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAAWARC*HILGVM
Trigger: CATCACTCCAAGGATGTGTCAGCATCTTGCCCATGC...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAGGCCACATTCCCTCCTaGAGCACCGACGCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFAGHIPS*STDAGR
Trigger: TCGCCCCGCGTCGGTGCTTCAGGAGGGAATGTGGCC...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326958.5
CDS-3UTR CCA 90 bp CAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAACGGCTCCAGTGGTGGTaGCGGAACAGGGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: QSSCLSLLRKILAQPYWKRLQWW*RNRASI
Trigger: GATGCTCGCCCTGTTCCGCCACCACCACTGGAGCCG...TTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR TCA 90 bp AGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCAATGGACCCCCTCGAGGGTaGAGTAGCAGTTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGYSNRAIHSLKLLDSSNGPPRG*SSSSAP
Trigger: TGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCC...ATTGCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR TCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTCTCCTCTCTTCCATaGGCCATCTCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERVSSLP*AISIGR
Trigger: TCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGAC...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTCAACAAAGTTGTTCTTaGGGGAAAAGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHAQQSCS*GKRAAS
Trigger: GGAGGCAGCCCTTTTCCCTCAAGAACAACTTTGTTG...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCCACTGTTACTTGTGTaGACTACCACCTTCATCGCC +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAPLLLV*TTTFIA
Trigger: GGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGACCACTGTTACTTGTGTaGACTACCACCTTCATCGCC +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERPLLLV*TTTFIA
Trigger: GGCGATGAAGGTGGTAGTTCACACAAGTAACAGTGG...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGAACGCTTTTATTTCTaGGTCTCCCCCTACCTGGCC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHERFYF*VSPYLA
Trigger: GGCCAGGTAGGGGGAGACTCAGAAATAAAAGCGTTC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGGCCACATTCCCTCCTaGAGCACCGACGCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKGHIPS*STDAGR
Trigger: TCGCCCCGCGTCGGTGCTTCAGGAGGGAATGTGGCC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGCCTCCCAGTCCCGTTaGCCTCCACGCTGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKASQSR*PPRCAE
Trigger: CTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCACCTGGAAGCGAGTaGCCGGCGGCAGAAGCCGCC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPPGSE*PAAEAA
Trigger: GGCGGCTTCTGCCGCCGGGCACTCGCTTCCAGGTGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACAGGTCCCAGTGCGATaGAAGCCGGGCCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKQVPVR*KPGHWR
Trigger: GCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp CAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAAGTCGCTGTAGACCAGTaGAGCGCGGCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: QSSCLSLLRKILAQPYWKVAVDQ*SAAPVV
Trigger: CACCACTGGAGCCGCGCTGCACTGGTCTACAGCGAC...TTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCCACTGGTCATGCCATaGCTGTGCGCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISPLVMP*LCATSM
Trigger: CATGCTGGTGGCGCACAGGCATGGCATGACCAGTGG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCGACTCAACCCGGGTaGCGCAGTCCCAGACGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPTQPG*RSPRRC
Trigger: GCAGCGTCTGGGACTGCGGCACCCGGGTTGAGTCGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCGCGGCTCCAGTGGTaGTGGCGGAACAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKARLQW*WRNRAS
Trigger: GCTCGCCCTGTTCCGCCACCACCACTGGAGCCGCGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCAGCGCGGCTCCAGTaGTGGTGGCGGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKAARLQ*WWRNRA
Trigger: CGCCCTGTTCCGCCACCACCACTGGAGCCGCGCTGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp CAAGCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGTCCTGGAAGACCTCGTaGACCCCCTCGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QAILLPQPTEKNFGTTILSWKTS*TPSRVK
Trigger: CTTCACCCTCGAGGGGGTCCACGAGGTCTTCCAGGA...CAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp GCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAATGCAAACCCTCCTCCTaGAAGACCTCGTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: AILLPQPTEKNFGTTILECKPSS*KTSWTP
Trigger: GGGGGTCCACGAGGTCTTCCAGGAGGAGGGTTTGCA...TTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAGGAAGCACTCACACATaGGCCAGCATCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGGSTHT*ASIWDR
Trigger: CCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCC...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCGGAAGCACTCACACATaGGCCAGCATCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPGSTHT*ASIWDR
Trigger: CCTGTCCCAGATGCTGGCCCATGTGTGAGTGCTTCC...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCTGGTGTGCCCGGCTaGCCCGGGCGTCACCTACAC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPGVPG*PGRHLH
Trigger: GTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434067.6
3UTR CAA 72 bp AAGCCAGGCTTGTTGGAGTTTATGCACATCACAGGCTaGAACTTCCCCGAGAGCAAGTGTGGTCAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: KPGLLEFMHITG*NFPESKCGQVS
Trigger: GCTAACCTGACCACACTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCATAAACTCCAACAAGCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACGCGGTCCACCAAGCTaGAGAGCGCACGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPRGPPS*RAHGSH
Trigger: GTGGGAACCGTGCGCTCTTCAGCTTGGTGGACCGCG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACGCGGTCCACCAAGCTaGAGAGCGCACGGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRGPPS*RAHGSH
Trigger: GTGGGAACCGTGCGCTCTTCAGCTTGGTGGACCGCG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACGGGCGCCACGCGCGTaGGGTGCGAGTACTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRAPRA*GASTQS
Trigger: ACTCTGAGTACTCGCACCTCACGCGCGTGGCGCCCG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTGTGCGCCACCAGCATaGTGCTCCGGATGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMCAPPA*CSGWCH
Trigger: GTGACACCATCCGGAGCATCATGCTGGTGGCGCACA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCAACAAAGTTGTTCTTaGGGGAAAAGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCQQSCS*GKRAAS
Trigger: GGAGGCAGCCCTTTTCCCTCAAGAACAACTTTGTTG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATACCTGTGGTCAGTCTTaGGGGAGAGATGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHTCGQS*GRDGLY
Trigger: ATAGAGTCCATCTCTCCCTCAAGACTGACCACAGGT...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCTGCACATCACAGGCTTaGACTTCCCCGAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPCTSQA*TSPRAS
Trigger: ACTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCA...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAGGCCACTGGCGCTGCTaGATACTCGCACACTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPGHWRC*ILAHWP
Trigger: GGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCC...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTACTCAGAGTCCTTGTaGTGGAAGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISYSESL*WKPAAS
Trigger: GCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTA...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGGCGCTCGAGGCACTGTaGTGGGGTTCCGCGACTCCA +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPALEAL*WGSATP
Trigger: TGGAGTCGCGGAACCCCAGCACAGTGCCTCGAGCGC...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCCCAGCCGACAGCATaGGCAGGTCCCAGTGCGATG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPQPTA*AGPSAM
Trigger: CATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACGGCTCCAGTGGTGGTaGCGGAACAGGGCGAGCATC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRLQWW*RNRASI
Trigger: GATGCTCGCCCTGTTCCGCCACCACCACTGGAGCCG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATAGTAGAGTGACTGTCTaGAGGGACGAGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHSRVTV*RDEYAC
Trigger: GCAAGCATACTCGTCCCTCCAGACAGTCACTCTACT...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTCACCAATAACCTCCTaGGTGCCCGCCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLSPITS*VPASTS
Trigger: TGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCACATGGGCCAGCATCTaGGACAGGCAGCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISTWASI*DRQLAL
Trigger: AAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCTTGGGGAGTCCCAAGTaGTACAACGCTTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPLGSPK*YNALLA
Trigger: GGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAA...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCGGGGCGGGTCAAAATaGAACTGGACCTTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISRGGSK*NWTFCA
Trigger: GGCACAGAAGGTCCAGTTCCATTTTGACCCGCCCCG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCACGCAGGTTTGCGCTaGAATCGCAGCGGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSHAGLR*NRSGAE
Trigger: CTCGGCACCGCTGCGATTCCAGCGCAAACCTGCGTG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACGCACGGGGAGAAAGTaGGCACCAGCAGAGACGGCA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRTGRK*APAETA
Trigger: TGCCGTCTCTGCTGGTGCTCACTTTCTCCCCGTGCG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCCGCACCCGGGTGAGTaGAAACAAGTACGAGTCATC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISPHPGE*KQVRVI
Trigger: GATGACTCGTACTTGTTTTCACTCACCCGGGTGCGG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGGGCCTAATTTGGGCTaGCATTTACTCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHGPNLG*HLLSCL
Trigger: CAGACATGAGAGTAAATGTCAGCCCAAATTAGGCCC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTAACTATCATGCACCGTaGCAGCTTTGTTCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCNYHAP*QLCSPS
Trigger: GCTAGGAGAACAAAGCTGTCACGGTGCATGATAGTT...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCGCAAGAAAGAGCTTaGCCTCGCCGCCGCCGACTC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPQERA*PRRRRL
Trigger: GAGTCGGCGGCGGCGAGGGCAAGCTCTTTCTTGCGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGGCCACTGGCGCTGCTaGATACTCGCACACTGGCCC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKGHWRC*ILAHWP
Trigger: GGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCGGGCCACTGGCGCTaGTGCATACTCGCACACTGG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPGHWR*CILAHW
Trigger: CCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAATGGGCAGGTCCCAGTaGGATGCAAGCCGGGCCACT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKMGRSQ*DASRAT
Trigger: AGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCAT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCCACTGGTCATGCCATaGCTGTGCGCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSPLVMP*LCATSM
Trigger: CATGCTGGTGGCGCACAGGCATGGCATGACCAGTGG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPASMDT*PAIPSN
Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATCCCAACACAAAGGTCTaGAACGAACAAACTCACAGC +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHPNTKV*NEQTHS
Trigger: GCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGG...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGGACCAAGGTCCCAGTaGAGATGGCTCCATCGCGGA +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSGPRSQ*RWLHRG
Trigger: TCCGCGATGGAGCCATCTGCACTGGGACCTTGGTCC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCTTTCGGCAGAAACTTaGACCCGACTCAACCCGGGT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISLSAET*TRLNPG
Trigger: ACCCGGGTTGAGTCGGGTGCAAGTTTCTGCCGAAAG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCTGGAATCGCAGCGGTaGCGAGGTCACAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSLESQR*RGHSVP
Trigger: TGGGACACTGTGACCTCGGCACCGCTGCGATTCCAG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTGGGCCACGCAGGTTTaGGCTGGAATCGCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPWATQV*AGIAAV
Trigger: CACCGCTGCGATTCCAGCGCAAACCTGCGTGGCCCA...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCAAGTACGAGTCATCCTaGGGCAGTAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLKYESS*GSNTST
Trigger: GGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTT...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGCAAGCCGGGCCACTaGCGCTGCTGCATACTCGCA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCKPGH*RCCILA
Trigger: TGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCATCTCGCCCATCTTaGCGTAGGCGGGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSSRPS*RRRAPR
Trigger: GCGTGGCGCCCGCCTACGCCAAGATGGGCGAGATGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATCCTGGAAGACCTCGTaGACCCCCTCGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFASWKTS*TPSRVK
Trigger: CTTCACCCTCGAGGGGGTCCACGAGGTCTTCCAGGA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCAGGAGGATGGCATCGTaGAATCCTTCAACAAACATG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIARRMAS*NPSTNM
Trigger: CATGTTTGTTGAAGGATTCCACGATGCCATCCTCCT...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTAGACGTAGAGGAGGATaGCATCGTGGAATCCTTCAA +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCRRRGG*HRGILQ
Trigger: TTGAAGGATTCCACGATGCCATCCTCCTCTACGTCT...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTCTCCGTTGGCATCTATaGACACCTGCCCGGCGATAC +
Preference number: 4 (lower is better)
Translates to: HYLHEIYAMAFISLLTACLRWHL*TPARRY
Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAG...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCCTCCACATCAGTCATaGCAATCACAGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCPPHQS*QSQRNP
Trigger: GGGATTTCTCTGTGATTGCCATGACTGATGTGGAGG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCTTGAAACTCATGATCTaGCCAGAACTGGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIALKLMI*PELEGV
Trigger: CACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAA...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCAGGGGTCACAGAATTaGTCTGTCACAAGGTCTATC +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCQGSQN*SVTRSI
Trigger: GATAGACCTTGTGACAGACCAATTCTGTGACCCCTG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGGATATGGCAACTTCTaGCGTCAGCGCTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSGYGNF*RQRSPP
Trigger: GGGAGGCGAGCGCTGACGCCAGAAGTTGCCATATCC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGCCTTTAACGCGCTCTaGTTCTCACTTGCGACGGTG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISAFNAL*FSLATV
Trigger: CACCGTCGCAAGTGAGAACCAGAGCGCGTTAAAGGC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
3UTR CAA 72 bp AGTAAGATGGACACAATCCTTCCTTGCTGTTTCACTTaGGGGAGTCCCAAGTGGTACAACGCTTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SKMDTILPCCFT*GSPKWYNALLA
Trigger: GGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGGAAGGATTGTGTCCATCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGGACCCCCTCGAGGGTaGAGTAGCAGTTCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKGPPRG*SSSSAP
Trigger: TGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGTGCGCCACCAGCATaGTGCTCCGGATGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCAPPA*CSGWCH
Trigger: GTGACACCATCCGGAGCATCATGCTGGTGGCGCACA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTCCTGGAGGCAGATGGTaGTTAATCATAATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAPGGRW*LIIIPE
Trigger: CTCAGGAATTATGATTAATCACCATCTGCCTCCAGG...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCAGAAGCTGGTCCCTCTaGACACCATCATCTCATTCT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPRSWSL*TPSSHS
Trigger: AGAATGAGATGATGGTGTTCAGAGGGACCAGCTTCT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTGCTGAGTATGGCTGTTaGAGGGGCACTAAATTATTG +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCAEYGC*RGTKLL
Trigger: CAATAATTTAGTGCCCCTTCAACAGCCATACTCAGC...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGCTGAGTATGGCTGTTaGAGGGGCACTAAATTATTG +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHAEYGC*RGTKLL
Trigger: CAATAATTTAGTGCCCCTTCAACAGCCATACTCAGC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCTCTGATTCTTCTTGCTaGGTATGGCTGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPSDSSC*VWLLKG
Trigger: CCCCTTCAACAGCCATACTCAGCAAGAAGAATCAGA...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAAGCATGGGCAAGATGCTaGCACATCCTTGGAGTGATG +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKAWARC*HILGVM
Trigger: CATCACTCCAAGGATGTGTCAGCATCTTGCCCATGC...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCGCTCCCCTCCAACCTaGGTGCTCAAAGATCCAACC +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSRSPPT*VLKDPT
Trigger: GGTTGGATCTTTGAGCACTCAGGTTGGAGGGGAGCG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACGTTGCCCTCCACGCTaGGCAGAGCATACTCGATGG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRCPPR*AEHTRW
Trigger: CCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAATGGGCAGGTCCCAGTaGGATGCAAGCCGGGCCACT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKMGRSQ*DASRAT
Trigger: AGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCAT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGCCACGCGCGTGAGGTaGGAGTACTCAGAGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKATRVR*EYSESL
Trigger: CAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGTCGCTGTAGACCAGTaGAGCGCGGCTCCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKVAVDQ*SAAPVV
Trigger: CACCACTGGAGCCGCGCTGCACTGGTCTACAGCGAC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAGTCATGCCATGCCTGTaGGCCACCAGCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFAVMPCL*ATSMML
Trigger: GAGCATCATGCTGGTGGCGCACAGGCATGGCATGAC...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGTCATGCCATGCCTGTaGGCCACCAGCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSVMPCL*ATSMML
Trigger: GAGCATCATGCTGGTGGCGCACAGGCATGGCATGAC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCACTGGTCATGCCATaGCTGTGCGCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPLVMP*LCATSM
Trigger: CATGCTGGTGGCGCACAGGCATGGCATGACCAGTGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTAGTCTCCACTGGTCATaGCATGCCTGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSSLHWS*HACAPP
Trigger: TGGTGGCGCACAGGCATGGCATGACCAGTGGAGACT...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPASMDT*PAIPSN
Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCGGCCACCTGATGATTTaGAGGGAGAGCTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPGHLMI*RESCLY
Trigger: ATACAAACAGCTCTCCCTGCAAATCATCAGGTGGCC...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCACAGGTATTCATGGATaGCTACAAAGTTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIATGIHG*LQSSVE
Trigger: CTCCACAGAACTTTGTAGGCATCCATGAATACCTGT...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTCTCAAACTCTCTTCCTaGACTAGAACTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHALKLSS*TRTSGV
Trigger: AACTCCAGAAGTTCTAGTGCAGGAAGAGAGTTTGAG...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAAGTGGTACAACGCTTTaGTTGCCTGGATTTTACTTC +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERSGTTL*LPGFYF
Trigger: GAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACT...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATCACTCAGGATCTGAGTaGTTTGTGTCCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHHSGSE*FVSQET
Trigger: TGTTTCTTGGGACACAAAGCACTCAGATCCTGAGTG...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGATTCAATTATCCACCATaGACAGGGAACAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERFNYPP*TGNKAQ
Trigger: CTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAA...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCTAGGCCACATGATTTaGAGGGAGAGCTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCLGHMI*RESCLY
Trigger: ATACAAACAGCTCTCCCTGCAAATCATGTGGCCTAG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326958.5
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACACCTCGATCTTCTGTaGCGGCAGCGCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKHLDLL*RQRLSL
Trigger: GAGAGAGAGGCGCTGCCGCCACAGAAGATCGAGGTG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCAGAGTCCTTGTGCTaGAAGCCAGCGGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSESLC*KPAASA
Trigger: GGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATCCTGGAAGACCTCGTaGACCCCCTCGAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKSWKTS*TPSRVK
Trigger: CTTCACCCTCGAGGGGGTCCACGAGGTCTTCCAGGA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGCAAACCCTCCTCCTaGAAGACCTCGTGGACCCCC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCKPSS*KTSWTP
Trigger: GGGGGTCCACGAGGTCTTCCAGGAGGAGGGTTTGCA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATAGGCGTAGTCTCCACTaGTCATGCCATGCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNRRSLH*SCHACA
Trigger: CGCACAGGCATGGCATGACCAGTGGAGACTACGCCT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCCGTTGGCATCTATaGACACCTGCCCGGCGATAC +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNLRWHL*TPARRY
Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAG...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCTCCGTTGGCATCTATaGACACCTGCCCGGCGATAC +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSLRWHL*TPARRY
Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCCCTCCACATCAGTCATaGCAATCACAGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPPPHQS*QSQRNP
Trigger: GGGATTTCTCTGTGATTGCCATGACTGATGTGGAGG...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTCACCAATAACCTCCTaGGTGCCCGCCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMSPITS*VPASTS
Trigger: TGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTGGGTTCGCCTCTCAATaGTTATTCTGTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHAGFASQ*LFCISS
Trigger: GGAAGAAATACAGAATAACCATTGAGAGGCGAACCC...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCATTAGCATTTGGCTGTaGCCAAGGGAAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAISIWL*PREKGK
Trigger: TTTCCCTTTTTCCCTTGGCCACAGCCAAATGCTAAT...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGCAGCAATTAGCATTTaGCTGTGGCCAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHAAISI*LWPREK
Trigger: TTTTTCCCTTGGCCACAGCCAAATGCTAATTGCTGC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATTCGAGGGGCCTAATTTaGGCTGACATTTACTCTCAT +
Preference number: 4 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHSRGLI*ADIYSH
Trigger: ATGAGAGTAAATGTCAGCCCAAATTAGGCCCCTCGA...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACAACCGCTCCTTCTCTaGAGCGCTCGAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKQPLLL*SARGTV
Trigger: CACAGTGCCTCGAGCGCTCCAGAGAAGGAGCGGTTG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCGGCCGCACCCGGGTaGGTGAAAACAAGTACGAGT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPAAPG*VKTSTS
Trigger: ACTCGTACTTGTTTTCACTCACCCGGGTGCGGCCGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATGTGCGCCACCAGCATaGTGCTCCGGATGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKCAPPA*CSGWCH
Trigger: GTGACACCATCCGGAGCATCATGCTGGTGGCGCACA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGTCTCCTCTCTTCCATaGGCCATCTCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISVSSLP*AISIGR
Trigger: TCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGAC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTGTCCTCAGTAGAGTaGCTGTCTGGAGGGACGAGT +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNLSSVE*LSGGTS
Trigger: ACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAG...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGGACGGTGCACTCTCATaGCAGCTTCCCATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPDGALS*QLPIPP
Trigger: GGGAGGAATGGGAAGCTGTCATGAGAGTGCACCGTC...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTGAACGCTTTTATTTCTaGGTCTCCCCCTACCTGGCC +
Preference number: 4 (lower is better)
Translates to: HYLHEIYAMAFISLLTACERFYF*VSPYLA
Trigger: GGCCAGGTAGGGGGAGACTCAGAAATAAAAGCGTTC...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGATTCTTCAGAGAAATGTaGTGTTTTCAGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERFFREM*CFQGPS
Trigger: AGAAGGTCCCTGAAAACATCACATTTCTCTGAAGAA...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCCCATCACTATCTGCATaGGATCTATGCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPPSLSA*DLCNGL
Trigger: AAGGCCATTGCATAGATCTCATGCAGATAGTGATGG...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCATCCACTCAGGATCTaGGTGCTTTGTGTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISHPLRI*VLCVPR
Trigger: TCTTGGGACACAAAGCACTCAGATCCTGAGTGGATG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCGGGCCTAATTTGGGCTaGCATTTACTCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPGPNLG*HLLSCL
Trigger: CAGACATGAGAGTAAATGTCAGCCCAAATTAGGCCC...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCAGAAGCTGGTCCCTCTaGACACCATCATCTCATTCT +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLRSWSL*TPSSHS
Trigger: AGAATGAGATGATGGTGTTCAGAGGGACCAGCTTCT...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCACTGCTCGCACACATaGTCACCACTTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISHCSHT*SPLSRS
Trigger: AGAACGAGAAAGTGGTGATCATGTGTGCGAGCAGTG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACGTTGCCCTCCACGCTaGGCAGAGCATACTCGATGG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRCPPR*AEHTRW
Trigger: CCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATACTCAGAGTCCTTGTaGTGGAAGCCAGCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKYSESL*WKPAAS
Trigger: GCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAGTCATGCCATGCCTGTaGGCCACCAGCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPVMPCL*ATSMML
Trigger: GAGCATCATGCTGGTGGCGCACAGGCATGGCATGAC...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGTCATGCCATGCCTGTaGGCCACCAGCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKVMPCL*ATSMML
Trigger: GAGCATCATGCTGGTGGCGCACAGGCATGGCATGAC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCACTGGTCATGCCATaGCTGTGCGCCACCAGCATG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPLVMP*LCATSM
Trigger: CATGCTGGTGGCGCACAGGCATGGCATGACCAGTGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGTCTCCACTGGTCATaGCATGCCTGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKSLHWS*HACAPP
Trigger: TGGTGGCGCACAGGCATGGCATGACCAGTGGAGACT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGAGTCTCCACTGGTCATaGCATGCCTGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPSLHWS*HACAPP
Trigger: TGGTGGCGCACAGGCATGGCATGACCAGTGGAGACT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCAGGGACGAGTATGCTTaGTTAGCTTCAAAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPRDEYA*LASKSC
Trigger: ACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCCTGGAGGGACGAGTATaGTTGCTTAGCTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLLEGRV*LLSFKV
Trigger: GACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAG...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTTGTCATTTCTGTGCTTaGTGTCAAGTAGTAACTCTC +
Preference number: 4 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHACHFCA*CQVVTL
Trigger: GAGAGTTACTACTTGACAGCAAGCACAGAAATGACA...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATCACGCCCTCTCAGCTaGCTCCCAGCTCCCATTTCT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKSRPLS*LPAPIS
Trigger: AGAAATGGGAGCTGGGAGGCAGCTGAGAGGGCGTGA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTAGTGGTACAACGCTTTaGTTGCCTGGATTTTACTTC +
Preference number: 4 (lower is better)
Translates to: TEKSSTTNLSSSSRESKASGTTL*LPGFYF
Trigger: GAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACT...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCATCTCATTGTTGACTaGATGTCTTACACACACACA +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAHLIVD*MSYTHT
Trigger: TGTGTGTGTGTAAGACATGCAGTCAACAATGAGATG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGATATTTATGGAATGTaGATGCTGAACACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERDIYGM*MLNTKA
Trigger: GGCTTTGGTGTTCAGCATGCACATTCCATAAATATC...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCTCTGTCCAACTATCATaGACCGTGACAGCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPSVQLS*TVTALF
Trigger: GAACAAAGCTGTCACGGTGCATGATAGTTGGACAGA...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCCCCAACACAAAGGTCTaGAACGAACAAACTCACAGC +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPPNTKV*NEQTHS
Trigger: GCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGG...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGCTCTGGTTCTCACTTaGGACGGTGAAAAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISALVLT*DGEKAN
Trigger: GTTTGCCTTTTCACCGTCGCAAGTGAGAACCAGAGC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTGCAAGCCGGGCCACTaGCGCTGCTGCATACTCGCA +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILCKPGH*RCCILA
Trigger: TGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp GCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAACTCTCTCACTGGCCTaGATATTGCGCACGATGTCT +
Preference number: 4 (lower is better)
Translates to: AILLPQPTEKNFGTTILETLSLA*ILRTMS
Trigger: AGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGT...TTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTCACCACTCTCTCACTaGCCTGGATATTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMSPLSH*PGYCAR
Trigger: TCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAAGGCGTAGTCTCCACTaGTCATGCCATGCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPRRSLH*SCHACA
Trigger: CGCACAGGCATGGCATGACCAGTGGAGACTACGCCT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGGCGTAGTCTCCACTaGTCATGCCATGCCTGTGCG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRRSLH*SCHACA
Trigger: CGCACAGGCATGGCATGACCAGTGGAGACTACGCCT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCAGTAGAGTGACTGTCTaGAGGGACGAGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISSRVTV*RDEYAC
Trigger: GCAAGCATACTCGTCCCTCCAGACAGTCACTCTACT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACTCCGTTGGCATCTATaGACACCTGCCCGGCGATAC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKLRWHL*TPARRY
Trigger: GTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGACATGGGCCAGCATCTaGGACAGGCAGCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPTWASI*DRQLAL
Trigger: AAGCGCAAGCTGCCTGTCCCAGATGCTGGCCCATGT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTCCCCCGAGGAAGTATaGAGGCCTACTCACAAATTT +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLSPEEV*RPTHKF
Trigger: AAATTTGTGAGTAGGCCTCCATACTTCCTCGGGGGA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAGGTCCCAGTGCAGATaGCTCCATCGCGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRSQCR*LHRGPG
Trigger: ACCAGGTCCGCGATGGAGCCATCTGCACTGGGACCT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATGGGTTTCTGGGGATATaGCAACTTCTGGCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNGFLGI*QLLASA
Trigger: CGCTGACGCCAGAAGTTGCCATATCCCCAGAAACCC...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGGTGAAAAGGCAAACTaGGGTTTCTGGGGATATGGC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISGEKAN*GFWGYG
Trigger: GCCATATCCCCAGAAACCCCAGTTTGCCTTTTCACC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGGGTCAAAATGGAACTaGACCTTCTGTGCCTACTGC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISGSKWN*TFCAYC
Trigger: GCAGTAGGCACAGAAGGTCCAGTTCCATTTTGACCC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAACGGTTCCCACAGTCTaGATCCTCGTAAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKTVPTV*ILVSHL
Trigger: CAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACACTGCTCGCACACATaGTCACCACTCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKHCSHT*SPLSHW
Trigger: CCAGTGAGAGAGTGGTGATCATGTGTGCGAGCAGTG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGCTGTCCTCAGTAGAGTaGCTGTCTGGAGGGACGAGT +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPLSSVE*LSGGTS
Trigger: ACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAG...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACTGTCCTCAGTAGAGTaGCTGTCTGGAGGGACGAGT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKLSSVE*LSGGTS
Trigger: ACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAATGCTGTAACCAGCTCTaGGTACTTCATGTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKCCNQL*VLHVEP
Trigger: TGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCA...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTGCTGTAACCAGCTCTaGGTACTTCATGTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISCCNQL*VLHVEP
Trigger: TGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCA...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGACGGTGCACTCTCATaGCAGCTTCCCATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKDGALS*QLPIPP
Trigger: GGGAGGAATGGGAAGCTGTCATGAGAGTGCACCGTC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCAGCATCTACGCATTTTaGCCTGTATCAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLSIYAF*PVSMSA
Trigger: AGCTGACATTGATACAGGTCAAAATGCGTAGATGCT...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGTGAATAGGGAGAAGTaGGGGCATTCCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISVNREK*GHSKAN
Trigger: GTTTGCTTTGGAATGCCCTCACTTCTCCCTATTCAC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAAGTGAATAGGGAGAAGTaGGGGCATTCCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKVNREK*GHSKAN
Trigger: GTTTGCTTTGGAATGCCCTCACTTCTCCCTATTCAC...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCATCACTATCTGCATaGGATCTATGCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCPSLSA*DLCNGL
Trigger: AAGGCCATTGCATAGATCTCATGCAGATAGTGATGG...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGCATCCACTCAGGATCTaGGTGCTTTGTGTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMHPLRI*VLCVPR
Trigger: TCTTGGGACACAAAGCACTCAGATCCTGAGTGGATG...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGATGGAATGTGCATGCTaGACACCAAAGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMMECAC*TPKPGL
Trigger: CAAGCCTGGCTTTGGTGTTCAGCATGCACATTCCAT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCAGATCTGGCTCCCATTaGAACACTTCCATTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPRSGSH*NTSIVF
Trigger: AAACACAATGGAAGTGTTTCAATGGGAGCCAGATCT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATAAGTCATTTGCAATGTaGACGGGCTACACTGGGCGG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNKSFAM*TGYTGR
Trigger: CCGCCCAGTGTAGCCCGTTCACATTGCAAATGACTT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCCTCTGTCAGCGCACTaGGAGCAGGAAAGTGAAACT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSPLSAH*EQESET
Trigger: AGTTTCACTTTCCTGCTCTCAGTGCGCTGACAGAGG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTCCGGGTGTAAACCTGTaGGTCTGTAATATACATATA +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCPGVNL*VCNIHI
Trigger: TATATGTATATTACAGACGCACAGGTTTACACCCGG...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCAGAGACGGCATCGTaGCGCAAGAAAGAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKAETAS*RKKELA
Trigger: GGCAAGCTCTTTCTTGCGGCACGATGCCGTCTCTGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp AGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCAATCACTGGCCTGGATATTaGGCACGATGTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SGYSNRAIHSLKLLDSSNHWPGY*ARCLPD
Trigger: ATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTG...ATTGCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAGTCTCCACTGGTCATaGCATGCCTGTGCGCCACCA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSLHWS*HACAPP
Trigger: TGGTGGCGCACAGGCATGGCATGACCAGTGGAGACT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAAGGGACGAGTATGCTTaGTTAGCTTCAAAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGRDEYA*LASKSC
Trigger: ACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTGGAGAGCTGTTTGTATaGTCTACAATTCGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAGELFV*STIRFS
Trigger: TGAAAACCGAATTGTAGAGCATACAAACAGCTCTCC...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATCGCCACCAAGGGATTaGTCAGACTCTCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFASPPRD*SDSPVS
Trigger: GGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTGTACAACGCTTTGCTTaGCTGGATTTTACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCVQRFA*LDFTSQ
Trigger: TTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTAC...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCCACTCAGGATCTGAGTaGTTTGTGTCCCAAGAAACA +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLHSGSE*FVSQET
Trigger: TGTTTCTTGGGACACAAAGCACTCAGATCCTGAGTG...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTCTGTCCAACTATCATaGACCGTGACAGCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLSVQLS*TVTALF
Trigger: GAACAAAGCTGTCACGGTGCATGATAGTTGGACAGA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGGGACCAAGGTCCCAGTaGAGATGGCTCCATCGCGGA +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILGPRSQ*RWLHRG
Trigger: TCCGCGATGGAGCCATCTGCACTGGGACCTTGGTCC...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCCCTCCAACCTGAGTaGTCAAAGATCCAACCGCTC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPLQPE*SKIQPL
Trigger: GAGCGGTTGGATCTTTGAGCACTCAGGTTGGAGGGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp GCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAACTCAAGCAATCCTCCTaGCTCAGCCTACTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AILLPQPTEKNFGTTILELKQSS*LSLLRK
Trigger: TTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTTGAG...TTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR GCA 90 bp AAGCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGTTGCCCAGGCTGGAATaGAGTGGCTATTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: KQSSCLSLLRKILAQPYWLPRLE*SGYSNR
Trigger: CCTATTTGAATAGCCACTGCATTCCAGCCTGGGCAA...CCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGCATACTCGCACACTaGCCCCAGGATAAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCILAH*PQDKVW
Trigger: CCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp AGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCAATCGTCGAAACTGTAGATaGACGTGTGCAAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: SGYSNRAIHSLKLLDSSNRRNCR*TCANPP
Trigger: AGGAGGGTTTGCACACGTCCATCTACAGTTTCGACG...ATTGCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACCAGATCCAAGTCTTTaGTCTCGTCGAAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGPDPSL*SRRNCR
Trigger: TCTACAGTTTCGACGAGACCAAAGACTTGGATCTGG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp TGCAGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCCCAGATCCAAGTCTTTaGTCTCGTCGAAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: CSGYSNRAIHSLKLLDSSPDPSL*SRRNCR
Trigger: TCTACAGTTTCGACGAGACCAAAGACTTGGATCTGG...GCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCAGGAGGATGGCATCGTaGAATCCTTCAACAAACATG +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPRRMAS*NPSTNM
Trigger: CATGTTTGTTGAAGGATTCCACGATGCCATCCTCCT...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCCTCCACATCAGTCATaGCAATCACAGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISPPHQS*QSQRNP
Trigger: GGGATTTCTCTGTGATTGCCATGACTGATGTGGAGG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATTGGGGAGTCCCAAGTaGTACAACGCTTTGCTTGCC +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFALGSPK*YNALLA
Trigger: GGCAAGCAAAGCGTTGTACCACTTGGGACTCCCCAA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCAGATTGAAGTTATCTaGGGAACGCTTTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: EAGPSEHHHLILSASTIAQIEVI*GTLLFL
Trigger: CAGAAATAAAAGCGTTCCCCAGATAACTTCAATCTG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCAAAGCCAGGCTTGTTaGAGTTTATGCACATCACAG +
Preference number: 4 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCQSQAC*SLCTSQ
Trigger: CTGTGATGTGCATAAACTCCAACAAGCCTGGCTTTG...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTACTGACAGCATCAGCTaGTTTAGAATACTTTGCATT +
Preference number: 4 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHATDSIS*FRILCI
Trigger: AATGCAAAGTATTCTAAACCAGCTGATGCTGTCAGT...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAACAGGGGTCACAGAATTaGTCTGTCACAAGGTCTATC +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKQGSQN*SVTRSI
Trigger: GATAGACCTTGTGACAGACCAATTCTGTGACCCCTG...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCAGGTGTCACAAAGCTTaGAAAGCATCCCCAAAGCGT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISRCHKA*KASPKR
Trigger: ACGCTTTGGGGATGCTTTCCAAGCTTTGTGACACCT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCACCAAGTGTTTGTAATTaGCGGTGCATCTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFAPSVCN*RCISLA
Trigger: TGCGAGGGAGATGCACCGTCAATTACAAACACTTGG...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACCGCACCCGGGTGAGTaGAAACAAGTACGAGTCATC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKPHPGE*KQVRVI
Trigger: GATGACTCGTACTTGTTTTCACTCACCCGGGTGCGG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAACGGTTCCCACAGTCTaGATCCTCGTAAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKTVPTV*ILVSHL
Trigger: CAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATGGCCCCAAGGATATTTaGCATTCGGCCGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNGPKDI*HSAAFQ
Trigger: TTGAAATGCGGCCGAATGTCAAATATCCTTGGGGCC...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCCTTCCTTTAAGCTACTaGAAAATGGGATCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPLPLSY*KMGSDG
Trigger: TCCATCAGATCCCATTTTTCAGTAGCTTAAAGGAAG...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATCAGGGACCTTCTCATaGAACCTGTGGTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFASGTFS*NLWSVL
Trigger: CAAGACTGACCACAGGTTTCATGAGAAGGTCCCTGA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATTCAGGGACCTTCTCATaGAACCTGTGGTCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNSGTFS*NLWSVL
Trigger: CAAGACTGACCACAGGTTTCATGAGAAGGTCCCTGA...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCCTGGAACCTACTTTCTaGATCCATCACTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPLEPTF*IHHYLH
Trigger: ATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAG...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCATGCACATCACAGGCTTaGACTTCCCCGAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPCTSQA*TSPRAS
Trigger: ACTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCA...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATATGGAATGTGCATGCTaGACACCAAAGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNMECAC*TPKPGL
Trigger: CAAGCCTGGCTTTGGTGTTCAGCATGCACATTCCAT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCACTGCTCGCACACATaGTCACCACTTTCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSHCSHT*SPLSRS
Trigger: AGAACGAGAAAGTGGTGATCATGTGTGCGAGCAGTG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATTCTCACTTGCGACGGTaGAAAGGCAAACTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNSHLRR*KGKLGF
Trigger: AAACCCCAGTTTGCCTTTTCACCGTCGCAAGTGAGA...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTTGGGCGGGAGAATTCTaGCAATTAAGTCCCGCACAT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSWAGEF*QLSPAH
Trigger: ATGTGCGGGACTTAATTGTCAGAATTCTCCCGCCCA...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCACTGGCCTGGATATTaGGCACGATGTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNHWPGY*ARCLPD
Trigger: ATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTG...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCAGGGACGAGTATGCTTaGTTAGCTTCAAAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISRDEYA*LASKSC
Trigger: ACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCAGGTTACTTTCTTCTTaGTGGGTTCGCCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISRLLSS*WVRLSM
Trigger: CATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCTATCCTTGTGTGAAATaGTCCCAAAAGCCATCAAGA +
Preference number: 4 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLYPCVK*SQKPSR
Trigger: TCTTGATGGCTTTTGGGAGCATTTCACACAAGGATA...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAAATTTGTCATTTCTGTaGTTGCTGTCAAGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: DIGQRSPQPQTCPPALERNLSFL*LLSSSN
Trigger: GTTACTACTTGACAGCAAGCACAGAAATGACAAATT...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACTCAAACTCTCTTCCTaGACTAGAACTTCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGLKLSS*TRTSGV
Trigger: AACTCCAGAAGTTCTAGTGCAGGAAGAGAGTTTGAG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCGATATTTATGGAATGTaGATGCTGAACACCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPDIYGM*MLNTKA
Trigger: GGCTTTGGTGTTCAGCATGCACATTCCATAAATATC...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAGCTGTGGGGTATGCCTaGAAGAGATATTTATGGAAT +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGAVGYA*KRYLWN
Trigger: ATTCCATAAATATCTCTTGCAGGCATACCCCACAGC...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTCTAGCTGTGGGGTATaGCTGCAAGAGATATTTATG +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLSSCGV*LQEIFM
Trigger: CATAAATATCTCTTGCAGGCATACCCCACAGCTAGA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTTTCAATTATCCACCATaGACAGGGAACAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCFNYPP*TGNKAQ
Trigger: CTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAA...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATGAACTGGACCTTCTGTaGCTACTGCAGCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNELDLL*LLQPSH
Trigger: ATGACTTGGCTGCAGTAGGCACAGAAGGTCCAGTTC...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGTACGAGTCATCCTaGGGCAGTAACACCAGCACC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKKYESS*GSNTST
Trigger: GGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTAACTTTTCACCTCCATaGAAAACTTCTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: TEKSSTTNLSSSSRESKANFSPP*KTSQTQ
Trigger: CTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTT...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCACCAATAACCTCCTaGGTGCCCGCCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSPITS*VPASTS
Trigger: TGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAATTGAAACTCATGATCTaGCCAGAACTGGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKLKLMI*PELEGV
Trigger: CACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAA...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGCATGTTGCAGACTACTaGGTGCAAAGCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMHVADY*VQSRYP
Trigger: TGGGTATCTGCTTTGCACCCAGTAGTCTGCAACATG...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTCATGTTGCAGACTACTaGGTGCAAAGCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: HYLHEIYAMAFISLLTACHVADY*VQSRYP
Trigger: TGGGTATCTGCTTTGCACCCAGTAGTCTGCAACATG...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCTATCCCATGTCCTCTTaGTTTCAATTATCCACCATG +
Preference number: 4 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLYPMSS*FQLSTM
Trigger: CATGGTGGATAATTGAAACCAAGAGGACATGGGATA...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTTATACTCTGAGTACGTaGCATTCTTGCTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAYTLST*HSCLIE
Trigger: TTCTATCAAGCAAGAATGCCACGTACTCAGAGTATA...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCCAAAGGCGAGGGAATaGTTCAACTTCTGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSPKARE*FNFWRC
Trigger: ACACCTCCAGAAGTTGAACCATTCCCTCGCCTTTGG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAAGATGACCTAAAACTCTCTCACTaGCCTGGATATTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: SCLSLLRKILAQPYWKDDLKLSH*PGYCAR
Trigger: TCGTGCGCAATATCCAGGCCAGTGAGAGAGTTTTAG...GTCATCTTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR CAA 72 bp AGAATTGGTCTGTCACAAGGTCTATCCCATGTCCTCTaGGTTTCAATTATCCACCATGCACAGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: RIGLSQGLSHVL*VSIIHHAQGTK
Trigger: CTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGACAGACCAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCACTGCTCGCACACATaGTCACCACTCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILHCSHT*SPLSHW
Trigger: CCAGTGAGAGAGTGGTGATCATGTGTGCGAGCAGTG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGCGTAATCCTCCATATTaGGCCCTTGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMRNPPY*ALVSQL
Trigger: CAGTTGAGAAACAAGGGCTCAATATGGAGGATTACG...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGGCCCCAAGGATATTTaGCATTCGGCCGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKGPKDI*HSAAFQ
Trigger: TTGAAATGCGGCCGAATGTCAAATATCCTTGGGGCC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACTGAAAAATGGGATCTaGTGGAATCTTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGLKNGI*WNLPVI
Trigger: AATTACGGGAAGATTCCATCAGATCCCATTTTTCAG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTATATTTGTTTGTCATaGGATGAAAGGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISYICLS*DERPGG
Trigger: GCCTCCAGGCCTTTCATCTCATGACAAACAAATATA...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGACCTGTGGTCAGTCTTaGGGGAGAGATGGACTCTAT +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPTCGQS*GRDGLY
Trigger: ATAGAGTCCATCTCTCCCTCAAGACTGACCACAGGT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTTCTTCAGAGAAATGTaGTGTTTTCAGGGACCTTCT +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLFFREM*CFQGPS
Trigger: AGAAGGTCCCTGAAAACATCACATTTCTCTGAAGAA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATAAATGGTCTTTCATTTaGCTAGGCGTCCGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNKWSFI*LGVRVH
Trigger: GTGGACACGGACGCCTAGTCAAATGAAAGACCATTT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACACTGGCCTGGATATTaGGCACGATGTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKHWPGY*ARCLPD
Trigger: ATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKASMDT*PAIPSN
Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGGCCACCTGATGATTTaGAGGGAGAGCTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSGHLMI*RESCLY
Trigger: ATACAAACAGCTCTCCCTGCAAATCATCAGGTGGCC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000434067.6
CDS-3UTR GCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGAGGTTACTTTCTTCTTaGTGGGTTCGCCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMRLLSS*WVRLSM
Trigger: CATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAAACAGGTATTCATGGATaGCTACAAAGTTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKTGIHG*LQSSVE
Trigger: CTCCACAGAACTTTGTAGGCATCCATGAATACCTGT...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTAGTTTAAACTCATGTTaGAGACTACTGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCSLNSC*RLLGAK
Trigger: CTTTGCACCCAGTAGTCTGCAACATGAGTTTAAACT...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAACGACACTTTTTCCTTTaGATCCAGCATGGAGAACTA +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKRHFFL*IQHGEL
Trigger: TAGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCG...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCGAATCCATCACTATCTaGATGAGATCTATGCAATGG +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPESITI*MRSMQW
Trigger: CCATTGCATAGATCTCATGCAGATAGTGATGGATTC...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAGAATCCATCACTATCTaGATGAGATCTATGCAATGG +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGESITI*MRSMQW
Trigger: CCATTGCATAGATCTCATGCAGATAGTGATGGATTC...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCATTTACTCTCATGTCTaGATCCACTCAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISIYSHV*IHSGSE
Trigger: CTCAGATCCTGAGTGGATGCAGACATGAGAGTAAAT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTCTAGCTGTGGGGTATaGCTGCAAGAGATATTTATG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISSSCGV*LQEIFM
Trigger: CATAAATATCTCTTGCAGGCATACCCCACAGCTAGA...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTTGCAGCCAAGTCATTTaGAATGTGAACGGGCTACAC +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSCSQVI*NVNGLH
Trigger: GTGTAGCCCGTTCACATTGCAAATGACTTGGCTGCA...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAACTCTCTCACTGGCCTaGATATTGCGCACGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPTLSLA*ILRTMS
Trigger: AGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAACTCTCTCACTGGCCTaGATATTGCGCACGATGTCT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKTLSLA*ILRTMS
Trigger: AGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCACCACTCTCTCACTaGCCTGGATATTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSPLSH*PGYCAR
Trigger: TCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGAGTAGAGTGACTGTCTaGAGGGACGAGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPSRVTV*RDEYAC
Trigger: GCAAGCATACTCGTCCCTCCAGACAGTCACTCTACT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAAGGGTTCGCCTCTCAATaGTTATTCTGTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKGFASQ*LFCISS
Trigger: GGAAGAAATACAGAATAACCATTGAGAGGCGAACCC...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGGGTTCGCCTCTCAATaGTTATTCTGTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISGFASQ*LFCISS
Trigger: GGAAGAAATACAGAATAACCATTGAGAGGCGAACCC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTACTTTCTTCTTGCTaGGTTCGCCTCTCAATGGTT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISLLSSC*VRLSMV
Trigger: AACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAA...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTTATCCCATGTCCTCTTaGTTTCAATTATCCACCATG +
Preference number: 4 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCYPMSS*FQLSTM
Trigger: CATGGTGGATAATTGAAACCAAGAGGACATGGGATA...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGACCACTTTCTCGTTCTaGCCACATTCCCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPTTFSF*PHSLLK
Trigger: CTTCAGGAGGGAATGTGGCCAGAACGAGAAAGTGGT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGCAAACTGGGGTTTCTaGGGATATGGCAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKANWGF*GYGNFW
Trigger: CCAGAAGTTGCCATATCCCCAGAAACCCCAGTTTGC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp CAAGCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAAGCTTGCATGTGTaGTTAACAGGCAGTAGAATG +
Preference number: 4 (lower is better)
Translates to: QAILLPQPTEKNFGTTILESLHV*LTGSRM
Trigger: CATTCTACTGCCTGTTAACCACACATGCAAGCTTTC...CAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR CAA 72 bp CTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTaGACTGCATGTCTTACACACACACACCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: LHEIYAMAFISL*TACLTHTHPKS
Trigger: TGATTTTGGGTGTGTGTGTGTAAGACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGTCTCCTCTCTTCCATaGGCCATCTCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKVSSLP*AISIGR
Trigger: TCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGAC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGCTGTAACCAGCTCTaGGTACTTCATGTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCCNQL*VLHVEP
Trigger: TGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAACTGAAAAATGGGATCTaGTGGAATCTTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKLKNGI*WNLPVI
Trigger: AATTACGGGAAGATTCCATCAGATCCCATTTTTCAG...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCTGAAAAATGGGATCTaGTGGAATCTTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISLKNGI*WNLPVI
Trigger: AATTACGGGAAGATTCCATCAGATCCCATTTTTCAG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCTTCCTTTAAGCTACTaGAAAATGGGATCTGATGGA +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISLPLSY*KMGSDG
Trigger: TCCATCAGATCCCATTTTTCAGTAGCTTAAAGGAAG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCCTGGAGGCAGATGGTaGTTAATCATAATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNPGGRW*LIIIPE
Trigger: CTCAGGAATTATGATTAATCACCATCTGCCTCCAGG...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTATATTTGTTTGTCATaGGATGAAAGGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMYICLS*DERPGG
Trigger: GCCTCCAGGCCTTTCATCTCATGACAAACAAATATA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTTTTATATCCTTGTGTaGAATGCTCCCAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLFYILV*NAPKSH
Trigger: ATGGCTTTTGGGAGCATTTCACACAAGGATATAAAA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAATGCTCAAAATGTTATTaGGGAAAGACCCCAGTTATG +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKCSKCY*GKTPVM
Trigger: CATAACTGGGGTCTTTCCTCAATAACATTTTGAGCA...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACAAGAAAAGACAAGTTaGTGGTTCTTCAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGQEKTS*WFFREM
Trigger: CATTTCTCTGAAGAACCATCAACTTGTCTTTTCTTG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAGATTTTAGAAGCCTGTaGATAGGGAGAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPDFRSL*IGRSEG
Trigger: GCCCTCACTTCTCCCTATTCACAGGCTTCTAAAATC...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAACCAAACCATGGGGTGTaGTTAAATAAAACCCATGAA +
Preference number: 4 (lower is better)
Translates to: LDLETHDLARTGRSVTLKPNHGV*LNKTHE
Trigger: TTCATGGGTTTTATTTAATCACACCCCATGGTTTGG...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGCACATTGTTATACTCTaGGTACGTGGCATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMHIVIL*VRGILA
Trigger: AGCAAGAATGCCACGTACTCAGAGTATAACAATGTG...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CAAGCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGACCATATTGGAAAGATaGCTGGAAAGAAAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: QAILLPQPTEKNFGTTILTILER*LERKLA
Trigger: TGCAAGCTTTCTTTCCAGTCATCTTTCCAATATGGT...CAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR GCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGCTGGAGGGACGAGTATaGTTGCTTAGCTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPLEGRV*LLSFKV
Trigger: GACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAG...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACTGGAGGGACGAGTATaGTTGCTTAGCTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKLEGRV*LLSFKV
Trigger: GACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGTTCTGTTCCAAGTCTaGTGTATAATTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISVLFQV*CIIFPP
Trigger: TGGAGGGAAAATTATACAGCAGACTTGGAACAGAAC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCATCTATGGACACCTaGCCGGCGATACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKASMDT*PAIPSN
Trigger: ATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTATCCTTGTGTGAAATaGTCCCAAAAGCCATCAAGA +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISYPCVK*SQKPSR
Trigger: TCTTGATGGCTTTTGGGAGCATTTCACACAAGGATA...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCAATTTGTCATTTCTGTaGTTGCTGTCAAGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPNLSFL*LLSSSN
Trigger: GTTACTACTTGACAGCAAGCACAGAAATGACAAATT...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTCGCCACCAAGGGATTaGTCAGACTCTCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILSPPRD*SDSPVS
Trigger: GGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCAGTTGTCAAAGATGTTaGTTAGCAGTTAGGAACGTA +
Preference number: 4 (lower is better)
Translates to: LLLILKLMIWPELEGVSPSCQRC*LAVRNV
Trigger: TACGTTCCTAACTGCTAAGCAACATCTTTGACAACT...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTTCACAAATTTCTACCTaGATGGGCAAGATGCTGACA +
Preference number: 4 (lower is better)
Translates to: HYLHEIYAMAFISLLTACSQIST*MGKMLT
Trigger: TGTCAGCATCTTGCCCATGCAGGTAGAAATTTGTGA...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACGTCGAAACTGTAGATaGACGTGTGCAAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRRNCR*TCANPP
Trigger: AGGAGGGTTTGCACACGTCCATCTACAGTTTCGACG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAGTAGAGTGACTGTCTaGAGGGACGAGTATGCTTGC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSRVTV*RDEYAC
Trigger: GCAAGCATACTCGTCCCTCCAGACAGTCACTCTACT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAAGACGTAGAGGAGGATaGCATCGTGGAATCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPRRRGG*HRGILQ
Trigger: TTGAAGGATTCCACGATGCCATCCTCCTCTACGTCT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCTCCACATCAGTCATaGCAATCACAGAGAAATCCC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPPHQS*QSQRNP
Trigger: GGGATTTCTCTGTGATTGCCATGACTGATGTGGAGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTTACTTTCTTCTTGCTaGGTTCGCCTCTCAATGGTT +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMLLSSC*VRLSMV
Trigger: AACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGATTAGCATTTGGCTGTaGCCAAGGGAAAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMISIWL*PREKGK
Trigger: TTTCCCTTTTTCCCTTGGCCACAGCCAAATGCTAAT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCTTCTTCCATCCTTTTTaGAATTCGACACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLFFHPF*NSTLFP
Trigger: AGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAA...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACAGATTGAAGTTATCTaGGGAACGCTTTTATTTCTG +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGQIEVI*GTLLFL
Trigger: CAGAAATAAAAGCGTTCCCCAGATAACTTCAATCTG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 72 bp TATCTGCATGAGATCTATGCAATGGCCTTCATCTCATaGTTGACTGCATGTCTTACACACACACACCCAAAA +
Preference number: 4 (lower is better)
Translates to: YLHEIYAMAFIS*LTACLTHTHPK
Trigger: TTTTGGGTGTGTGTGTGTAAGACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 72 bp AAGCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTaGGCACAACCATATTGGAAAGATGACTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: KQSSCLSLLRKI*AQPYWKDDWKE
Trigger: TTCTTTCCAGTCATCTTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR TCA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTGTCTCCTCTCTTCCATaGGCCATCTCCATAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSVSSLP*AISIGR
Trigger: TCTTCCTATGGAGATGGCTCATGGAAGAGAGGAGAC...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACGTAATCCTCCATATTaGGCCCTTGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRNPPY*ALVSQL
Trigger: CAGTTGAGAAACAAGGGCTCAATATGGAGGATTACG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGCGTAATCCTCCATATTaGGCCCTTGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPRNPPY*ALVSQL
Trigger: CAGTTGAGAAACAAGGGCTCAATATGGAGGATTACG...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATGCTGTAACCAGCTCTaGGTACTTCATGTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKCCNQL*VLHVEP
Trigger: TGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAAGCATCTACGCATTTTaGCCTGTATCAATGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFASIYAF*PVSMSA
Trigger: AGCTGACATTGATACAGGTCAAAATGCGTAGATGCT...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAAGAGGATCAAGCTTCTaGTTCTTCTTGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFARGSSF*FFLLSM
Trigger: CATACTCAGCAAGAAGAATCAGAAGCTTGATCCTCT...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATAGATCTGGCTCCCATTaGAACACTTCCATTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNRSGSH*NTSIVF
Trigger: AAACACAATGGAAGTGTTTCAATGGGAGCCAGATCT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAACTATCATGCACCGTaGCAGCTTTGTTCTCCTAGC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKNYHAP*QLCSPS
Trigger: GCTAGGAGAACAAAGCTGTCACGGTGCATGATAGTT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTCAATTAAATCTTTCCTaGATTTGCAGAAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSQLNLS*ICRRAG
Trigger: GCCTGCCCTTCTGCAAATTCAGGAAAGATTTAATTG...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATTCAGATTATGCACTGTaGTCCCGAAATCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNSDYAL*SRNLHC
Trigger: ACAGTGAAGATTTCGGGATCACAGTGCATAATCTGA...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTGGAACCGTCAATGTaGTTATGGGTAATGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNLEPSM*LWVMFQ
Trigger: CTGAAACATTACCCATAATCACATTGACGGTTCCAG...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACTGAGAGCAGGAAAGTaGAACTTGTTGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKLRAGK*NLLLPK
Trigger: CTTTGGGAGCAACAAGTTTCACTTTCCTGCTCTCAG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGGGACGAGTATGCTTaGTTAGCTTCAAAGTCGTGT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRDEYA*LASKSC
Trigger: ACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAAGGTTACTTTCTTCTTaGTGGGTTCGCCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPRLLSS*WVRLSM
Trigger: CATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGGTTACTTTCTTCTTaGTGGGTTCGCCTCTCAATG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRLLSS*WVRLSM
Trigger: CATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTGTCATTTCTGTGCTTaGTGTCAAGTAGTAACTCTC +
Preference number: 4 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMCHFCA*CQVVTL
Trigger: GAGAGTTACTACTTGACAGCAAGCACAGAAATGACA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTGTACAACGCTTTGCTTaGCTGGATTTTACTTCTCAA +
Preference number: 4 (lower is better)
Translates to: HYLHEIYAMAFISLLTACVQRFA*LDFTSQ
Trigger: TTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTAC...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATTTACTCTCATGTCTaGATCCACTCAGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSIYSHV*IHSGSE
Trigger: CTCAGATCCTGAGTGGATGCAGACATGAGAGTAAAT...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGCTGTGGGGTATGCCTaGAAGAGATATTTATGGAAT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSAVGYA*KRYLWN
Trigger: ATTCCATAAATATCTCTTGCAGGCATACCCCACAGC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCTCACAGCAACTCCATaGTGTTCAGGGGCTACTTCA +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILLTATP*CSGATS
Trigger: TGAAGTAGCCCCTGAACAGCATGGAGTTGCTGTGAG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACTAGGCCACATGATTTaGAGGGAGAGCTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKLGHMI*RESCLY
Trigger: ATACAAACAGCTCTCCCTGCAAATCATGTGGCCTAG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000415167.2
CDS-3UTR GCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGACCTTCTGTGCCTACTaGAGCCAAGTCATTTGCAAT +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPTFCAY*SQVICN
Trigger: ATTGCAAATGACTTGGCTGCAGTAGGCACAGAAGGT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTCGTCGAAACTGTAGATaGACGTGTGCAAACCCTCCT +
Preference number: 4 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSRRNCR*TCANPP
Trigger: AGGAGGGTTTGCACACGTCCATCTACAGTTTCGACG...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCAGATCCAAGTCTTTaGTCTCGTCGAAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPDPSL*SRRNCR
Trigger: TCTACAGTTTCGACGAGACCAAAGACTTGGATCTGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CCA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCAACTTTTCACCTCCATaGAAAACTTCTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISNFSPP*KTSQTQ
Trigger: CTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGGAGGATGGCATCGTaGAATCCTTCAACAAACATG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRRMAS*NPSTNM
Trigger: CATGTTTGTTGAAGGATTCCACGATGCCATCCTCCT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGAGGAGGATGGCATCGTaGAATCCTTCAACAAACATG +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPRRMAS*NPSTNM
Trigger: CATGTTTGTTGAAGGATTCCACGATGCCATCCTCCT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAGACGTAGAGGAGGATaGCATCGTGGAATCCTTCAA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRRRGG*HRGILQ
Trigger: TTGAAGGATTCCACGATGCCATCCTCCTCTACGTCT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGATATTACAGGTATTCATaGATGCCTACAAAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGYYRYS*MPTKFC
Trigger: ACAGAACTTTGTAGGCATCCATGAATACCTGTAATA...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCCCCCGAGGAAGTATaGAGGCCTACTCACAAATTT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSPEEV*RPTHKF
Trigger: AAATTTGTGAGTAGGCCTCCATACTTCCTCGGGGGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACAAAGCCAGGCTTGTTaGAGTTTATGCACATCACAG +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPQSQAC*SLCTSQ
Trigger: CTGTGATGTGCATAAACTCCAACAAGCCTGGCTTTG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACGTAATCCTCCATATTaGGCCCTTGTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRNPPY*ALVSQL
Trigger: CAGTTGAGAAACAAGGGCTCAATATGGAGGATTACG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTTTTTATATCCTTGTGTaGAATGCTCCCAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HYLHEIYAMAFISLLTACFYILV*NAPKSH
Trigger: ATGGCTTTTGGGAGCATTTCACACAAGGATATAAAA...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAATGTCAGCTGAAGTTTaGCTGGATGAGAAAATACTG +
Preference number: 4 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFAMSAEV*LDEKIL
Trigger: CAGTATTTTCTCATCCAGTCAAACTTCAGCTGACAT...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTGATTTTAGAAGCCTGTaGATAGGGAGAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSDFRSL*IGRSEG
Trigger: GCCCTCACTTCTCCCTATTCACAGGCTTCTAAAATC...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGCCTTCATCTCATTGTTaGCTGCATGTCTTACACACA +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPPSSHC*LHVLHT
Trigger: TGTGTGTAAGACATGCAGTCAACAATGAGATGAAGG...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACCTTCATCTCATTGTTaGCTGCATGTCTTACACACA +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPPSSHC*LHVLHT
Trigger: TGTGTGTAAGACATGCAGTCAACAATGAGATGAAGG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTTCTGATTCTTCTTGCTaGGTATGGCTGTTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSSDSSC*VWLLKG
Trigger: CCCCTTCAACAGCCATACTCAGCAAGAAGAATCAGA...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATGTTCTGTTCCAAGTCTaGTGTATAATTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNVLFQV*CIIFPP
Trigger: TGGAGGGAAAATTATACAGCAGACTTGGAACAGAAC...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATGGAGAGCTGTTTGTATaGTCTACAATTCGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNGELFV*STIRFS
Trigger: TGAAAACCGAATTGTAGAGCATACAAACAGCTCTCC...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATTATCCTTGTGTGAAATaGTCCCAAAAGCCATCAAGA +
Preference number: 4 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNYPCVK*SQKPSR
Trigger: TCTTGATGGCTTTTGGGAGCATTTCACACAAGGATA...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGAAAGTGAAACTTGTTaGTCCCAAAGGCGAGGGAAT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKESETC*SQRRGN
Trigger: ATTCCCTCGCCTTTGGGAGCAACAAGTTTCACTTTC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGGGTTCGCCTCTCAATaGTTATTCTGTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKGFASQ*LFCISS
Trigger: GGAAGAAATACAGAATAACCATTGAGAGGCGAACCC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCAGCAATTAGCATTTaGCTGTGGCCAAGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKAAISI*LWPREK
Trigger: TTTTTCCCTTGGCCACAGCCAAATGCTAATTGCTGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGAATGGTTCAACTTCTaGAGGTGTCACAAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKEWFNF*RCHKAW
Trigger: CCAAGCTTTGTGACACCTCCAGAAGTTGAACCATTC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp TGGAAAGATGACTGGAAAGAAAGCTTGCATGTGTGGTTAACAGGCAGTAGAATGTATTGGAAAGATGACTaGAAAGAAAGCTTGCATGTG +
Preference number: 4 (lower is better)
Translates to: WKDDWKESLHVWLTGSRMYWKDD*KESLHV
Trigger: CACATGCAAGCTTTCTTTCCAGTCATCTTTCCAATA...CATTCTACTGCCTGTTAACCACACATGCAAGCTTTCTTTCCAGTCATCTTTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CCA 90 bp AGTGGCTATTCAAATAGGGCAATCCATAGCCTCAAACTCTTGGACTCAAGCAATTTGGCACAACCATATTaGAAAGATGACTGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SGYSNRAIHSLKLLDSSNLAQPY*KDDWKE
Trigger: TTCTTTCCAGTCATCTTTCCAATATGGTTGTGCCAA...ATTGCTTGAGTCCAAGAGTTTGAGGCTATGGATTGCCCTATTTGAATAGCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507141.1
3UTR CAA 72 bp GTGCAAAGCAGATACCCAGTAAAAACTTACTCAACTTaGTCCAAATTCCTTATCTCCACACCTAACCCACTA +
Preference number: 4 (lower is better)
Translates to: VQSRYPVKTYST*SKFLISTPNPL
Trigger: TAGTGGGTTAGGTGTGGAGATAAGGAATTTGGACAAAGTTGAGTAAGTTTTTACTGGGTATCTGCTTTGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACTTCCTTTAAGCTACTaGAAAATGGGATCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPLPLSY*KMGSDG
Trigger: TCCATCAGATCCCATTTTTCAGTAGCTTAAAGGAAG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACTTCCTTTAAGCTACTaGAAAATGGGATCTGATGGA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKLPLSY*KMGSDG
Trigger: TCCATCAGATCCCATTTTTCAGTAGCTTAAAGGAAG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATATATTTGTTTGTCATaGGATGAAAGGCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKYICLS*DERPGG
Trigger: GCCTCCAGGCCTTTCATCTCATGACAAACAAATATA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGCTCAAAATGTTATTaGGGAAAGACCCCAGTTATG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCSKCY*GKTPVM
Trigger: CATAACTGGGGTCTTTCCTCAATAACATTTTGAGCA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAATGTCAGCTGAAGTTTaGCTGGATGAGAAAATACTG +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKMSAEV*LDEKIL
Trigger: CAGTATTTTCTCATCCAGTCAAACTTCAGCTGACAT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAGAGGATCAAGCTTCTaGTTCTTCTTGCTGAGTATG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKRGSSF*FFLLSM
Trigger: CATACTCAGCAAGAAGAATCAGAAGCTTGATCCTCT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGTTCTGTTCCAAGTCTaGTGTATAATTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKVLFQV*CIIFPP
Trigger: TGGAGGGAAAATTATACAGCAGACTTGGAACAGAAC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGGAGAGCTGTTTGTATaGTCTACAATTCGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKGELFV*STIRFS
Trigger: TGAAAACCGAATTGTAGAGCATACAAACAGCTCTCC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCACATCTCATTGTTGACTaGATGTCTTACACACACACA +
Preference number: 4 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPHLIVD*MSYTHT
Trigger: TGTGTGTGTGTAAGACATGCAGTCAACAATGAGATG...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTAGGTGGCTTCTTATTTaGGCGTTGCTAAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSRWLLI*ALLRLL
Trigger: AAGCAACCTTAGCAACGCCCAAATAAGAAGCCACCT...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTAACTTTTCACCTCCATaGAAAACTTCTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSNFSPP*KTSQTQ
Trigger: CTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTT...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATTACTTTCTTCTTGCTaGGTTCGCCTCTCAATGGTT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKLLSSC*VRLSMV
Trigger: AACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTCGAGGGGCCTAATTTaGGCTGACATTTACTCTCAT +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILSRGLI*ADIYSH
Trigger: ATGAGAGTAAATGTCAGCCCAAATTAGGCCCCTCGA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATTTACTCATGAGATCTaGCTCCCATTGAAACACTTC +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKFTHEI*LPLKHF
Trigger: GAAGTGTTTCAATGGGAGCCAGATCTCATGAGTAAA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGTAATCCACACACACTaGAAATTGAGATTTAGTGCT +
Preference number: 4 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSVIHTH*KLRFSA
Trigger: AGCACTAAATCTCAATTTCCAGTGTGTGTGGATTAC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCTTATCGCTCTTTCTaGAACCGTCAATGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPYRSF*NRQCDY
Trigger: ATAATCACATTGACGGTTCCAGAAAGAGCGATAAGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR TCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACTGAAAAATGGGATCTaGTGGAATCTTCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKLKNGI*WNLPVI
Trigger: AATTACGGGAAGATTCCATCAGATCCCATTTTTCAG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR TCA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTTTTATATCCTTGTGTaGAATGCTCCCAAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPFYILV*NAPKSH
Trigger: ATGGCTTTTGGGAGCATTTCACACAAGGATATAAAA...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR TCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCTGGAACCTACTTTCTaGATCCATCACTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILLEPTF*IHHYLH
Trigger: ATGCAGATAGTGATGGATTCAGAAAGTAGGTTCCAG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGTTCTGTTCCAAGTCTaGTGTATAATTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKVLFQV*CIIFPP
Trigger: TGGAGGGAAAATTATACAGCAGACTTGGAACAGAAC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR GCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAGTTTAAACTCATGTTaGAGACTACTGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSLNSC*RLLGAK
Trigger: CTTTGCACCCAGTAGTCTGCAACATGAGTTTAAACT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCGACACTTTTTCCTTTaGATCCAGCATGGAGAACTA +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILRHFFL*IQHGEL
Trigger: TAGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR GCA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGTTGTCAAAGATGTTaGTTAGCAGTTAGGAACGTA +
Preference number: 4 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKSCQRC*LAVRNV
Trigger: TACGTTCCTAACTGCTAAGCAACATCTTTGACAACT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTTACTTTCTTCTTGCTaGGTTCGCCTCTCAATGGTT +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILLLSSC*VRLSMV
Trigger: AACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATTTACTCATGAGATCTaGCTCCCATTGAAACACTTC +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKFTHEI*LPLKHF
Trigger: GAAGTGTTTCAATGGGAGCCAGATCTCATGAGTAAA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 72 bp GAGAACACATTGTTATACTCTGAGTACGTGGCATTCTaGCTTGATAGAAACATTTACAAGGACACATACACA +
Preference number: 4 (lower is better)
Translates to: ENTLLYSEYVAF*LDRNIYKDTYT
Trigger: TGTGTATGTGTCCTTGTAAATGTTTCTATCAAGCAAGAATGCCACGTACTCAGAGTATAACAATGTGTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR TCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGCCAAACCATGGGGTGTaGTTAAATAAAACCCATGAA +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILPNHGV*LNKTHE
Trigger: TTCATGGGTTTTATTTAATCACACCCCATGGTTTGG...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAACTTTTCACCTCCATaGAAAACTTCTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKNFSPP*KTSQTQ
Trigger: CTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATATACTCTGAGTACGTaGCATTCTTGCTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKYTLST*HSCLIE
Trigger: TTCTATCAAGCAAGAATGCCACGTACTCAGAGTATA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATATTACAGGTATTCATaGATGCCTACAAAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKYYRYS*MPTKFC
Trigger: ACAGAACTTTGTAGGCATCCATGAATACCTGTAATA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGACTGACAGCATCAGCTaGTTTAGAATACTTTGCATT +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILTDSIS*FRILCI
Trigger: AATGCAAAGTATTCTAAACCAGCTGATGCTGTCAGT...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
3UTR CAA 72 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATaGATGTCTTTCAACCCGTCTATCTCCTTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: NYEFFKNAPSVS*MSFNPSISLKN
Trigger: ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CCA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTTCTTCCATCCTTTTTaGAATTCGACACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EKFEQTPIQHLLEVILILFFHPF*NSTLFP
Trigger: AGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS GCA 90 bp CTATGCCCGCGCCACCGCCGCCGCCGCCAACGCCACCGCCACCGGTaGCGCCGGCCAGCAACGCCCAGCCGAGTAGTACGCACGGGGAGA +
Preference number: 5 (lower is better)
Translates to: LCPRHRRRRQRHRHR*RRPATPSRVVRTGR
Trigger: TCTCCCCGTGCGTACTACTCGGCTGGGCGTTGCTGGCCGGCGGCACCGGTGGCGGTGGCGTTGGCGGCGGCGGCGGTGGCGCGGGCATAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 90 bp TCTTCTGTGGCGGCAGCGCCTCTCTCTCCTGGCGTCCGCCGCCTATaGCCGCGCCACCGCCGCCGCCGCCAACGCCACCGCCACCGGTGC +
Preference number: 5 (lower is better)
Translates to: SSVAAAPLSPGVRRL*PRHRRRRQRHRHRC
Trigger: GCACCGGTGGCGGTGGCGTTGGCGGCGGCGGCGGTGGCGCGGGCATAGGCGGCGGACGCCAGGAGAGAGAGGCGCTGCCGCCACAGAAGA
77% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 90 bp ACAGCAGCGGTGGAGACCGGAGGGAAGCGGCTCTGGAGAAGTCCGTaGCCAGAGGAGCATCGCGGGAGTCCGCCGCGCGGCGGGGCGGGT +
Preference number: 5 (lower is better)
Translates to: TAAVETGGKRLWRSP*PEEHRGSPPRGGAG
Trigger: ACCCGCCCCGCCGCGCGGCGGACTCCCGCGATGCTCCTCTGGTCACGGACTTCTCCAGAGCCGCTTCCCTCCGGTCTCCACCGCTGCTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp CCTGGAAGCGAGTGCCCGGCGGCAGAAGCCGCCTCCCAGTCCCGTTaGCCTCCACGCTGCGCAGAGCATACTCGATGGCCGGCCGCACCC +
Preference number: 5 (lower is better)
Translates to: PGSECPAAEAASQSR*PPRCAEHTRWPAAP
Trigger: GGGTGCGGCCGGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTCGCTTCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp AACACCAGCACCTCGATCTTCTGTGGCGGCAGCGCCTCTCTCTCCTaGCGTCCGCCGCCTATGCCCGCGCCACCGCCGCCGCCGCCAACG +
Preference number: 5 (lower is better)
Translates to: NTSTSIFCGGSASLS*RPPPMPAPPPPPPT
Trigger: CGTTGGCGGCGGCGGCGGTGGCGCGGGCATAGGCGGCGGACGCCAGGAGAGAGAGGCGCTGCCGCCACAGAAGATCGAGGTGCTGGTGTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp AGGTCCCAGTGCAGATGGCTCCATCGCGGACCTGGTGTGCCCGGCTaGCCCGGGCGTCACCTACACCCCGCCTTCCTCAGCCCCGCGCCA +
Preference number: 5 (lower is better)
Translates to: RSQCRWLHRGPGVPG*PGRHLHPAFLSPAP
Trigger: TGGCGCGGGGCTGAGGAAGGCGGGGTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGCCATCTGCACTGGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp AGCGGCCAGCGCCCCAGCCGACAGCATGGGCAGGTCCCAGTGCGATaGAAGCCGGGCCACTGGCGCTGCTGCATACTCGCACACTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGQRPSRQHGQVPVR*KPGHWRCCILAHWP
Trigger: GGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp GCGGGCGCCACGCGCGTGAGGTGCGAGTACTCAGAGTCCTTGTGCTaGAAGCCAGCGGCCAGCGCCCCAGCCGACAGCATGGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AGATRVRCEYSESLC*KPAASAPADSMGRS
Trigger: GGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGCGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp AGTCCTTGTGCTGGAAGCCAGCGGCCAGCGCCCCAGCCGACAGCATaGGCAGGTCCCAGTGCGATGCAAGCCGGGCCACTGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SPCAGSQRPAPQPTA*AGPSAMQAGPLALL
Trigger: CAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 90 bp AAGCCAGCGGCCAGCGCCCCAGCCGACAGCATGGGCAGGTCCCAGTaGGATGCAAGCCGGGCCACTGGCGCTGCTGCATACTCGCACACT +
Preference number: 5 (lower is better)
Translates to: KPAASAPADSMGRSQ*DASRATGAAAYSHT
Trigger: AGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 90 bp CCCCCTCCCCCTGGGCCACGCAGGTTTGCGCTGGAATCGCAGCGGTaGCGAGGTCACAGTGTCCCAGCTCACGGACCCTCTGTCAGCGCA +
Preference number: 5 (lower is better)
Translates to: PPPPGPRRFALESQR*RGHSVPAHGPSVSA
Trigger: TGCGCTGACAGAGGGTCCGTGAGCTGGGACACTGTGACCTCGGCACCGCTGCGATTCCAGCGCAAACCTGCGTGGCCCAGGGGGAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp AAGGACCAAGGTCCCAGTGCAGATGGCTCCATCGCGGACCTGGTGTaGCCGGCTGGCCCGGGCGTCACCTACACCCCGCCTTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: KDQGPSADGSIADLV*PAGPGVTYTPPSSA
Trigger: GGCTGAGGAAGGCGGGGTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGCCATCTGCACTGGGACCTTGGTCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 90 bp GGTCTGGCTTGGCGCCCCGCGCCGCCGCCACGCGGTCCACCAAGCTaGAGAGCGCACGGTTCCCACAGTCTGAATCCTCGTAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: GLAWRPAPPPRGPPS*RAHGSHSLNPRKPP
Trigger: AGGTGGCTTACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAGCTTGGTGGACCGCGTGGCGGCGGCGCGGGGCGCCAAGCCAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp GGAACAAGGACCAAGGTCCCAGTGCAGATGGCTCCATCGCGGACCTaGTGTGCCCGGCTGGCCCGGGCGTCACCTACACCCCGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GTRTKVPVQMAPSRT*CARLARASPTPRLP
Trigger: AGGAAGGCGGGGTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGCCATCTGCACTGGGACCTTGGTCCTTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp CATGGGCAGGTCCCAGTGCGATGCAAGCCGGGCCACTGGCGCTGCTaGATACTCGCACACTGGCCCCAGGATAAGGTCTGGCTTGGCGCC +
Preference number: 5 (lower is better)
Translates to: HGQVPVRCKPGHWRC*ILAHWPQDKVWLGA
Trigger: GGCGCCAAGCCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 90 bp CGAGCATCATCTCGCCCATCTTGGCGTAGGCGGGCGCCACGCGCGTaGGGTGCGAGTACTCAGAGTCCTTGTGCTGGAAGCCAGCGGCCA +
Preference number: 5 (lower is better)
Translates to: RASSRPSWRRRAPRA*GASTQSPCAGSQRP
Trigger: TGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGCGCCCGCCTACGCCAAGATGGGCGAGATGATGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 90 bp CAGCATGGGCAGGTCCCAGTGCGATGCAAGCCGGGCCACTGGCGCTaGTGCATACTCGCACACTGGCCCCAGGATAAGGTCTGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: QHGQVPVRCKPGHWR*CILAHWPQDKVWLG
Trigger: GCCAAGCCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp AGCCGACAGCATGGGCAGGTCCCAGTGCGATGCAAGCCGGGCCACTaGCGCTGCTGCATACTCGCACACTGGCCCCAGGATAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SRQHGQVPVRCKPGH*RCCILAHWPQDKVW
Trigger: CCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 90 bp CGCCGGCCAGCAACGCCCAGCCGAGTAGTACGCACGGGGAGAAAGTaGGCACCAGCAGAGACGGCATCGTGCCGCAAGAAAGAGCTTGCC +
Preference number: 5 (lower is better)
Translates to: RRPATPSRVVRTGRK*APAETASCRKKELA
Trigger: GGCAAGCTCTTTCTTGCGGCACGATGCCGTCTCTGCTGGTGCTCACTTTCTCCCCGTGCGTACTACTCGGCTGGGCGTTGCTGGCCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 90 bp CGCCACGCGGTCCACCAAGCTGAAGAGCGCACGGTTCCCACAGTCTaGATCCTCGTAAGCCACCTGGAAGCGAGTGCCCGGCGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RHAVHQAEERTVPTV*ILVSHLEASARRQK
Trigger: CTTCTGCCGCCGGGCACTCGCTTCCAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAGCTTGGTGGACCGCGTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 90 bp TTCTGGCCACATTCCCTCCTGAAGCACCGACGCGGGGCGAGCACCTaGCCTTCCTGGTCCCTCGGCGCAAGGTCAGGGAACAAGGACCAA +
Preference number: 5 (lower is better)
Translates to: FWPHSLLKHRRGAST*PSWSLGARSGNKDQ
Trigger: TTGGTCCTTGTTCCCTGACCTTGCGCCGAGGGACCAGGAAGGTCAGGTGCTCGCCCCGCGTCGGTGCTTCAGGAGGGAATGTGGCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326958.5
ENST00000434067.6
ENST00000506712.1
CDS TCA 90 bp GTTCCCGGTAGGTCCCCCGGGTACGACACACGCTCCCCTCCAACCTaGGTGCTCAAAGATCCAACCGCTCCTTCTCTGGAGCGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VPGRSPGYDTRSPPT*VLKDPTAPSLERSR
Trigger: CCTCGAGCGCTCCAGAGAAGGAGCGGTTGGATCTTTGAGCACTCAGGTTGGAGGGGAGCGTGTGTCGTACCCGGGGGACCTACCGGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp CCGGTAGGTCCCCCGGGTACGACACACGCTCCCCTCCAACCTGAGTaGTCAAAGATCCAACCGCTCCTTCTCTGGAGCGCTCGAGGCACT +
Preference number: 5 (lower is better)
Translates to: PVGPPGTTHAPLQPE*SKIQPLLLWSARGT
Trigger: AGTGCCTCGAGCGCTCCAGAGAAGGAGCGGTTGGATCTTTGAGCACTCAGGTTGGAGGGGAGCGTGTGTCGTACCCGGGGGACCTACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 90 bp ATGGCCGGCCGCACCCGGGTGAGTGAAAACAAGTACGAGTCATCCTaGGGCAGTAACACCAGCACCTCGATCTTCTGTGGCGGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: MAGRTRVSENKYESS*GSNTSTSIFCGGSA
Trigger: GGCGCTGCCGCCACAGAAGATCGAGGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTTGTTTTCACTCACCCGGGTGCGGCCGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 90 bp CCTCCACGCTGCGCAGAGCATACTCGATGGCCGGCCGCACCCGGGTaGGTGAAAACAAGTACGAGTCATCCTGGGGCAGTAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: PPRCAEHTRWPAAPG*VKTSTSHPGAVTPA
Trigger: TGCTGGTGTTACTGCCCCAGGATGACTCGTACTTGTTTTCACTCACCCGGGTGCGGCCGGCCATCGAGTATGCTCTGCGCAGCGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 90 bp AGAGGAGCATCGCGGGAGTCCGCCGCGCGGCGGGGCGGGTCAAAATaGAACTGGACCTTCTGTGCCTACTGCAGCCAAGTCATTTGCAAT +
Preference number: 5 (lower is better)
Translates to: RGASRESAARRGGSK*NWTFCAYCSQVICN
Trigger: ATTGCAAATGACTTGGCTGCAGTAGGCACAGAAGGTCCAGTTCCATTTTGACCCGCCCCGCCGCGCGGCGGACTCCCGCGATGCTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 90 bp TGTGCAAACCCTCCTCCTGGAAGACCTCGTGGACCCCCTCGAGGGTaGAGTAGCAGTTCCGCTCCAGCTTGTCGTCGCTGTAGACCAGTG +
Preference number: 5 (lower is better)
Translates to: CANPPPGRPRGPPRG*SSSSAPACRRCRPV
Trigger: CACTGGTCTACAGCGACGACAAGCTGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCCACGAGGTCTTCCAGGAGGAGGGTTTGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS GCA 90 bp GCGCGGCGGGGCGGGTCAAAATGGAACTGGACCTTCTGTGCCTACTaGAGCCAAGTCATTTGCAATGTGAACGGGCTACACTGGGCGGGA +
Preference number: 5 (lower is better)
Translates to: ARRGGSKWNWTFCAY*SQVICNVNGLHWAG
Trigger: TCCCGCCCAGTGTAGCCCGTTCACATTGCAAATGACTTGGCTGCAGTAGGCACAGAAGGTCCAGTTCCATTTTGACCCGCCCCGCCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 90 bp GCCGAGGTCACAGTGTCCCAGCTCACGGACCCTCTGTCAGCGCACTaGGAGCAGGAAAGTGAAACTTGTTGCTCCCAAAGGCGAGGGAAT +
Preference number: 5 (lower is better)
Translates to: AEVTVSQLTDPLSAH*EQESETCCSQRRGN
Trigger: ATTCCCTCGCCTTTGGGAGCAACAAGTTTCACTTTCCTGCTCTCAGTGCGCTGACAGAGGGTCCGTGAGCTGGGACACTGTGACCTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 90 bp GTCCCAGCTCACGGACCCTCTGTCAGCGCACTGAGAGCAGGAAAGTaGAACTTGTTGCTCCCAAAGGCGAGGGAATGGTTCAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: VPAHGPSVSALRAGK*NLLLPKAREWFNFW
Trigger: CCAGAAGTTGAACCATTCCCTCGCCTTTGGGAGCAACAAGTTTCACTTTCCTGCTCTCAGTGCGCTGACAGAGGGTCCGTGAGCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp AAATTTCTTTTAGTCTCAGACCGACGCCCTCTTTCGGCAGAAACTTaGACCCGACTCAACCCGGGTGCCGCAGTCCCAGACGCTGCGTTT +
Preference number: 5 (lower is better)
Translates to: KFLLVSDRRPLSAET*TRLNPGAAVPDAAF
Trigger: AAACGCAGCGTCTGGGACTGCGGCACCCGGGTTGAGTCGGGTGCAAGTTTCTGCCGAAAGAGGGCGTCGGTCTGAGACTAAAAGAAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 90 bp GCTCTGGTTCTCACTTGCGACGGTGAAAAGGCAAACTGGGGTTTCTaGGGATATGGCAACTTCTGGCGTCAGCGCTCGCCTCCCTTAACA +
Preference number: 5 (lower is better)
Translates to: ALVLTCDGEKANWGF*GYGNFWRQRSPPLT
Trigger: TGTTAAGGGAGGCGAGCGCTGACGCCAGAAGTTGCCATATCCCCAGAAACCCCAGTTTGCCTTTTCACCGTCGCAAGTGAGAACCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 90 bp CGATGTCTTCCAGATCCAAGTCTTTGGTCTCGTCGAAACTGTAGATaGACGTGTGCAAACCCTCCTCCTGGAAGACCTCGTGGACCCCCT +
Preference number: 5 (lower is better)
Translates to: RCLPDPSLWSRRNCR*TCANPPPGRPRGPP
Trigger: AGGGGGTCCACGAGGTCTTCCAGGAGGAGGGTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGGAAGACATCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS-3UTR CAA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTAGGATAAGGTCTGGCTaGGCGCCCCGCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSRIRSG*APRAAA
Trigger: GGCGGCGGCGCGGGGCGCCAAGCCAGACCTTATCCT...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGAGTACTCAGAGTCCTaGTGCTGGAAGCCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHEYSES*CWKPAA
Trigger: GGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS TCA 90 bp TTTACTCCGAGGCCTTTAACGCGCTCTGGTTCTCACTTGCGACGGTaGAAAGGCAAACTGGGGTTTCTGGGGATATGGCAACTTCTGGCG +
Preference number: 5 (lower is better)
Translates to: FTPRPLTRSGSHLRR*KGKLGFLGIWQLLA
Trigger: CGCCAGAAGTTGCCATATCCCCAGAAACCCCAGTTTGCCTTTTCACCGTCGCAAGTGAGAACCAGAGCGCGTTAAAGGCCTCGGAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAGGATAAGGTCTGGCTaGGCGCCCCGCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKRIRSG*APRAAA
Trigger: GGCGGCGGCGCGGGGCGCCAAGCCAGACCTTATCCT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCCATATCGGTCTCCGTaGGCATCTATGGACACCTGC +
Preference number: 5 (lower is better)
Translates to: EAGPSEHHHLILSASTIAPYRSP*ASMDTC
Trigger: GCAGGTGTCCATAGATGCCAACGGAGACCGATATGG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCTGGGCCACGCAGGTTaGCGCTGGAATCGCAGCGGT +
Preference number: 5 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISLGHAG*RWNRSG
Trigger: ACCGCTGCGATTCCAGCGCAAACCTGCGTGGCCCAG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 90 bp CACTGGCCTGGATATTGCGCACGATGTCTTCCAGATCCAAGTCTTTaGTCTCGTCGAAACTGTAGATGGACGTGTGCAAACCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: HWPGYCARCLPDPSL*SRRNCRWTCANPPP
Trigger: AGGAGGAGGGTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCAGCTTGCGCTTACCTTaGCCTCCACTGTTACTTGTG +
Preference number: 5 (lower is better)
Translates to: EAGPSEHHHLILSASTIASLRLP*PPLLLV
Trigger: CACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCT...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAAGCTTGCGCTTACCTTaGCCTCCACTGTTACTTGTG +
Preference number: 5 (lower is better)
Translates to: DIGQRSPQPQTCPPALERSLRLP*PPLLLV
Trigger: CACAAGTAACAGTGGAGGCAAAGGTAAGCGCAAGCT...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS CCA 90 bp CATCAGTCATGGCAATCACAGAGAAATCCCCATATCGGTCTCCGTTaGCATCTATGGACACCTGCCCGGCGATACCTTCAAATGTTCTGT +
Preference number: 5 (lower is better)
Translates to: HQSWQSQRNPHIGLR*HLWTPARRYLQMFC
Trigger: ACAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTGTGATTGCCATGACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCCGCAAGAAAGAGCTaGCCCTCGCCGCCGCCGACT +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKAARKS*PSPPPT
Trigger: AGTCGGCGGCGGCGAGGGCAAGCTCTTTCTTGCGGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCGCTTCAAAGTCGTGTTaGTCTCCTCTCTTCCATGAG +
Preference number: 5 (lower is better)
Translates to: EAGPSEHHHLILSASTIAASKSC*SPLFHE
Trigger: CTCATGGAAGAGAGGAGACAAACACGACTTTGAAGC...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCGGGCCCCAAGGATATTaGACATTCGGCCGCATTTCA +
Preference number: 5 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPGPQGY*TFGRIS
Trigger: TGAAATGCGGCCGAATGTCAAATATCCTTGGGGCCC...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTAACCTGTGGTCAGTCTaGAGGGAGAGATGGACTCTA +
Preference number: 5 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCNLWSV*RERWTL
Trigger: TAGAGTCCATCTCTCCCTCAAGACTGACCACAGGTT...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS GCA 90 bp TTCACTGTCCTCAGTAGAGTGACTGTCTGGAGGGACGAGTATGCTTaGTTAGCTTCAAAGTCGTGTTTGTCTCCTCTCTTCCATGAGCCA +
Preference number: 5 (lower is better)
Translates to: FTVLSRVTVWRDEYA*LASKSCLSPLFHEP
Trigger: TGGCTCATGGAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CCA 90 bp CCACTGGGATTCCAACAGATAAGACCTAAAACTCTCTCACTGGCCTaGATATTGCGCACGATGTCTTCCAGATCCAAGTCTTTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: PLGFQQIRPKTLSLA*ILRTMSSRSKSLVS
Trigger: CGAGACCAAAGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTTTTAGGTCTTATCTGTTGGAATCCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CAA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTGCCCCTTCTGTTTCATaGATGTCTTTCAACCCGTCT +
Preference number: 5 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCAPSVS*MSFNPS
Trigger: AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGC...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTGCCCCTTCTGTTTCATaGATGTCTTTCAACCCGTCT +
Preference number: 5 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAAPSVS*MSFNPS
Trigger: AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGC...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACCTTGCTGTTTCACTTaGGGGAGTCCCAAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGPCCFT*GSPKWY
Trigger: GTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACCTGCATGGGCAAGATGCTGACACATCCTTGGAGTGATGCTGAATGTGGATGTACACCAAAGCCAGGCTaGTTGGAGTTTATGCACATC +
Preference number: 5 (lower is better)
Translates to: TCMGKMLTHPWSDAECGCTPKPG*LEFMHI
Trigger: GATGTGCATAAACTCCAACAAGCCTGGCTTTGGTGT...ACATCCACATTCAGCATCACTCCAAGGATGTGTCAGCATCTTGCCCATGCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCGAGATCTGGCTCCCATaGAAACACTTCCATTGTGTT +
Preference number: 5 (lower is better)
Translates to: EAGPSEHHHLILSASTIAEIWLP*KHFHCV
Trigger: AACACAATGGAAGTGTTTCAATGGGAGCCAGATCTC...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AAGCAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGTCACTGGCCTGGATATaGCGCACGATGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: KQSSCLSLLRKILAQPYWSLAWI*RTMSSR
Trigger: TCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGA...CCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS-3UTR CAA 90 bp AGTCAGAACCTGAATGTAGACATCGGACAGAGAAGTCCTCAACCACAAACCTGTGAGGGACGAGTATGCTaGCTTAGCTTCAAAGTCGTG +
Preference number: 5 (lower is better)
Translates to: SQNLNVDIGQRSPQPQTCEGRVC*LSFKVV
Trigger: CACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTC...ACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTCTACATTCAGGTTCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGCCATATCGGTCTCCGTaGGCATCTATGGACACCTGC +
Preference number: 5 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMPYRSP*ASMDTC
Trigger: GCAGGTGTCCATAGATGCCAACGGAGACCGATATGG...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTAAGGTTACTTTCTTCTaGCTGGGTTCGCCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAKVTFF*LGSPLN
Trigger: ATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTT...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATTCGACACTTTTTCCTTaGCATCCAGCATGGAGAACT +
Preference number: 5 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHSTLFP*HPAWRT
Trigger: AGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCGA...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCGGACACAATCCTTCCTaGCTGTTTCACTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLLILKLMIWPELEGVSPGHNPS*LFHFGE
Trigger: CTCCCCAAAGTGAAACAGCAAGGAAGGATTGTGTCC...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATGCCTTCATCTCATTGTaGACTGCATGTCTTACACAC +
Preference number: 5 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHAFISL*TACLTH
Trigger: GTGTGTAAGACATGCAGTCAACAATGAGATGAAGGC...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATTCTTTCGGCAGAAACTaGCACCCGACTCAACCCGGG +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNSFGRN*HPTQPG
Trigger: CCCGGGTTGAGTCGGGTGCAAGTTTCTGCCGAAAGA...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CAA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGAGGTGTCACAAAGCTaGGAAAGCATCCCCAAAGCG +
Preference number: 5 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISEVSQS*ESIPKA
Trigger: CGCTTTGGGGATGCTTTCCAAGCTTTGTGACACCTC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CAA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAAGAGGTGGCTTCTTATTaGGGCGTTGCTAAGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LDLETHDLARTGRSVTLKEVASY*GVAKVA
Trigger: AGCAACCTTAGCAACGCCCAAATAAGAAGCCACCTC...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGAGTACTCAGAGTCCTaGTGCTGGAAGCCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKEYSES*CWKPAA
Trigger: GGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CAA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCGCTTCAAAGTCGTGTTaGTCTCCTCTCTTCCATGAG +
Preference number: 5 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLASKSC*SPLFHE
Trigger: CTCATGGAAGAGAGGAGACAAACACGACTTTGAAGC...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GAGTCCCAAGTGGTACAACGCTTTGCTTGCCTGGATTTTACTTCTCAAACTCTCTGCAGGGAGAGCTGTTaGTATGCTCTACAATTCGGT +
Preference number: 5 (lower is better)
Translates to: ESQVVQRFACLDFTSQTLCRESC*YALQFG
Trigger: ACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCA...GAGAGTTTGAGAAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTTGGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GACATCGGACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGACCGCATTTTATATCCTaGTGTGAAATGCTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: DIGQRSPQPQTCPPALERPHFIS*CEMLPK
Trigger: TTTTGGGAGCATTTCACACAAGGATATAAAATGCGG...TCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCCTTCTTCCATCCTTTTaGGAATTCGACACTTTTTCC +
Preference number: 5 (lower is better)
Translates to: EAGPSEHHHLILSASTIALLPSF*EFDTFS
Trigger: GGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAG...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACAGAGAAGTCCTCAACCACAAACCTGTCCTCCAGCTCTAGAGAGAGTAAGGCTAAGTGGTACAACGCTTaGCTTGCCTGGATTTTACTT +
Preference number: 5 (lower is better)
Translates to: TEKSSTTNLSSSSRESKAKWYNA*LAWILL
Trigger: AAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTT...AGCCTTACTCTCTCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTGGGGCTACTTCATTGTaGTCTTATAAGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHAGATSL*SYKMLK
Trigger: CTTCAACATCTTATAAGACAACAATGAAGTAGCCCC...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAACAGGGGTCACAGAATaGGTCTGTCACAAGGTCTAT +
Preference number: 5 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGTGVTE*VCHKVY
Trigger: ATAGACCTTGTGACAGACCAATTCTGTGACCCCTGT...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp CCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCACAGCAACTCCATGCTAGACTCATGATAGATTaGTACTGTTTGGTAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PRTQHKGLQRTNSQQLHARLMID*YCLVVL
Trigger: CAGGACTACCAAACAGTACAAATCTATCATGAGTCT...AGCATGGAGTTGCTGTGAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS CCA 90 bp AACTTCTCAAACTCAGGTTTCACTGTCCTCAGTAGAGTGACTGTCTaGAGGGACGAGTATGCTTGCTTAGCTTCAAAGTCGTGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: NFSNSGFTVLSRVTV*RDEYACLASKSCLS
Trigger: AGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTTTGAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS-3UTR CAA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATCACTGGCCTGGATATaGCGCACGATGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFASLAWI*RTMSSR
Trigger: TCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCATATCGGTCTCCGTaGGCATCTATGGACACCTGC +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPYRSP*ASMDTC
Trigger: GCAGGTGTCCATAGATGCCAACGGAGACCGATATGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGCCATATCGGTCTCCGTaGGCATCTATGGACACCTGC +
Preference number: 5 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPPYRSP*ASMDTC
Trigger: GCAGGTGTCCATAGATGCCAACGGAGACCGATATGG...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCGAGTTTAAACTCATGTaGCAGACTACTGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPEFKLM*QTTGCK
Trigger: TTTGCACCCAGTAGTCTGCAACATGAGTTTAAACTC...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATCTTCTTCCATCCTTTTaGGAATTCGACACTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHLLPSF*EFDTFS
Trigger: GGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAG...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GAAGCTGGTCCCTCTGAACACCATCATCTCATTCTCTCCGCTTCCACAATTGCCTGGTTAATGAGAAATTaGAACAAACTCCAATCCAGC +
Preference number: 5 (lower is better)
Translates to: EAGPSEHHHLILSASTIAWLMRN*NKLQSS
Trigger: GCTGGATTGGAGTTTGTTCAAATTTCTCATTAACCA...GGCAATTGTGGAAGCGGAGAGAATGAGATGATGGTGTTCAGAGGGACCAGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGAGCGTCCTCGGGGCTTaGTTTGCTAAACCAGGTACC +
Preference number: 5 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPSVLGA*FAKPGT
Trigger: GGTACCTGGTTTAGCAAACAAAGCCCCGAGGACGCT...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp GCCGATTCTTCTAGGCCACATGATTTGCAGGGAGAGCTGTTTGTATaGTCTACAATTCGGTTTTCATCTATTCTCAGTTTTAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: ADSSRPHDLQGELFV*STIRFSSILSFKGP
Trigger: GGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCAAATCATGTGGCCTAGAAGAATCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000415167.2
CDS-3UTR CAA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGGCATCTCCCTCGCATTaGATCTCATTGATTCGCGCC +
Preference number: 5 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPASPSH*ISLIRA
Trigger: GGCGCGAATCAATGAGATCAAATGCGAGGGAGATGC...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATGAGGGACGAGTATGCTaGCTTAGCTTCAAAGTCGTG +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNEGRVC*LSFKVV
Trigger: CACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTC...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTGAGGGACGAGTATGCTaGCTTAGCTTCAAAGTCGTG +
Preference number: 5 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSEGRVC*LSFKVV
Trigger: CACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTC...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATAGGCCACCTGATGATTaGCAGGGAGAGCTGTTTGTA +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNRPPDD*QGELFV
Trigger: TACAAACAGCTCTCCCTGCAAATCATCAGGTGGCCT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000434067.6
CDS-3UTR CAA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTAGGCCACCTGATGATTaGCAGGGAGAGCTGTTTGTA +
Preference number: 5 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSRPPDD*QGELFV
Trigger: TACAAACAGCTCTCCCTGCAAATCATCAGGTGGCCT...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000434067.6
CDS-3UTR CAA 90 bp GAACAAAGCTCAGATTCCCAGGACCCAACACAAAGGTCTGCAACGAACAAACTCCCGCATTTTATATCCTaGTGTGAAATGCTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: EQSSDSQDPTQRSATNKLPHFIS*CEMLPK
Trigger: TTTTGGGAGCATTTCACACAAGGATATAAAATGCGG...GAGTTTGTTCGTTGCAGACCTTTGTGTTGGGTCCTGGGAATCTGAGCTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ACCTTCATCGCCACCAAGGGATTGCTCAGACTCTCCTGTTTCCTCACTAGACATATCATTATTGGTTTGTaGTACACTTCACCCATGCTT +
Preference number: 5 (lower is better)
Translates to: TFIATKGLLRLSCFLTRHIIIGL*YTSPML
Trigger: AAGCATGGGTGAAGTGTACAACAAACCAATAATGAT...ATGTCTAGTGAGGAAACAGGAGAGTCTGAGCAATCCCTTGGTGGCGATGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACCTTGCTGTTTCACTTaGGGGAGTCCCAAGTGGTAC +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKPCCFT*GSPKWY
Trigger: GTACCACTTGGGACTCCCCAAAGTGAAACAGCAAGG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAATGCACATCACAGGCTaGAACTTCCCCGAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKMHITG*NFPESK
Trigger: CTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCAT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTGGTTTCAATTATCCACCATGCACAGGGAACAAAGCTCAGATTCCCAGGACCCCCAATCCAGCACCTTTaGGAAGTTATTTTAATCCTG +
Preference number: 5 (lower is better)
Translates to: LVSIIHHAQGTKLRFPGPPIQHL*EVILIL
Trigger: CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGG...GGGTCCTGGGAATCTGAGCTTTGTTCCCTGTGCATGGTGGATAATTGAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTGCAGCCAAGTCATTaGCAATGTGAACGGGCTACA +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNLQPSH*QCERAT
Trigger: TGTAGCCCGTTCACATTGCAAATGACTTGGCTGCAG...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CAA 90 bp CAATCCTCCTGCCTCAGCCTACTGAGAAAAATTTTGGCACAACCATATTGGAAAGACTGGAAAGAAAGCTaGCATGTGTGGTTAACAGGC +
Preference number: 5 (lower is better)
Translates to: QSSCLSLLRKILAQPYWKDWKES*HVWLTG
Trigger: GCCTGTTAACCACACATGCAAGCTTTCTTTCCAGTC...TTTCCAATATGGTTGTGCCAAAATTTTTCTCAGTAGGCTGAGGCAGGAGGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS GCA 90 bp GATTCTTCTAGGCCACCTGATGATTTGCAGGGAGAGCTGTTTGTATaGTCTACAATTCGGTTTTCATCTATTCTCAGTTTTAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: DSSRPPDDLQGELFV*STIRFSSILSFKGP
Trigger: GGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCAAATCATCAGGTGGCCTAGAAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000434067.6
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCACTGGCCTGGATATaGCGCACGATGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSLAWI*RTMSSR
Trigger: TCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGGGCCCCAAGGATATTaGACATTCGGCCGCATTTCA +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKGPQGY*TFGRIS
Trigger: TGAAATGCGGCCGAATGTCAAATATCCTTGGGGCCC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTTGCAGGGAGAGCTGTTaGTATGCTCTACAATTCGGT +
Preference number: 5 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSCRESC*YALQFG
Trigger: ACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCA...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGAAGGTTACTTTCTTCTaGCTGGGTTCGCCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMKVTFF*LGSPLN
Trigger: ATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATGCCTCCACTGTTACTaGTGTGAACTACCACCTTCA +
Preference number: 5 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFACLHCY*CELPPS
Trigger: TGAAGGTGGTAGTTCACACAAGTAACAGTGGAGGCA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCAAGCATCTACGCATTTaGACCTGTATCAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISKHLRI*TCINVS
Trigger: GCTGACATTGATACAGGTCAAAATGCGTAGATGCTT...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTACTCTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCAAAATTCTTTCCAGATaGAAGTTATCTGGGGAACGC +
Preference number: 5 (lower is better)
Translates to: LLLILKLMIWPELEGVSPKILSR*KLSGER
Trigger: GCGTTCCCCAGATAACTTCAATCTGGAAAGAATTTT...GGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAAACCTGTGGTCAGTCTaGAGGGAGAGATGGACTCTA +
Preference number: 5 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPNLWSV*RERWTL
Trigger: TAGAGTCCATCTCTCCCTCAAGACTGACCACAGGTT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTGCCTTCATCTCATTGTaGACTGCATGTCTTACACAC +
Preference number: 5 (lower is better)
Translates to: HYLHEIYAMAFISLLTACAFISL*TACLTH
Trigger: GTGTGTAAGACATGCAGTCAACAATGAGATGAAGGC...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGACCAATCCAGCACCTTTaGGAAGTTATTTTAATCCTG +
Preference number: 5 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGPIQHL*EVILIL
Trigger: CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGG...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TCACAAGGTCTATCCCATGTCCTCTTGGTTTCAATTATCCACCATGCACAGGGAAGACTCATGATAGATTaGTACTGTTTGGTAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SQGLSHVLLVSIIHHAQGRLMID*YCLVVL
Trigger: CAGGACTACCAAACAGTACAAATCTATCATGAGTCT...TCCCTGTGCATGGTGGATAATTGAAACCAAGAGGACATGGGATAGACCTTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATTCCTCGGGGCTTTGTTaGCTAAACCAGGTACCTAAA +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNSSGLC*LNQVPK
Trigger: TTTAGGTACCTGGTTTAGCAAACAAAGCCCCGAGGA...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CAA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCATGGGCGTTGCTAAGGTaGCTTTTGAAAGCGTTTTTG +
Preference number: 5 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFAWALLR*LLKAFL
Trigger: CAAAAACGCTTTCAAAAGCAACCTTAGCAACGCCCA...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGAGGGACGAGTATGCTaGCTTAGCTTCAAAGTCGTG +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKEGRVC*LSFKVV
Trigger: CACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGGGGCCCCAAGGATATTaGACATTCGGCCGCATTTCA +
Preference number: 5 (lower is better)
Translates to: EKFEQTPIQHLLEVILILGPQGY*TFGRIS
Trigger: TGAAATGCGGCCGAATGTCAAATATCCTTGGGGCCC...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTGCAGGGAGAGCTGTTaGTATGCTCTACAATTCGGT +
Preference number: 5 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPCRESC*YALQFG
Trigger: ACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCA...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATGCAGGGAGAGCTGTTaGTATGCTCTACAATTCGGT +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKCRESC*YALQFG
Trigger: ACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATAAGGTTACTTTCTTCTaGCTGGGTTCGCCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNKVTFF*LGSPLN
Trigger: ATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGGCCCCTTCTGTTTCATaGATGTCTTTCAACCCGTCT +
Preference number: 5 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPAPSVS*MSFNPS
Trigger: AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGC...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCCCGCATTTTATATCCTaGTGTGAAATGCTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISPHFIS*CEMLPK
Trigger: TTTTGGGAGCATTTCACACAAGGATATAAAATGCGG...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000434067.6
CDS-3UTR CAA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTGAGTTTAAACTCATGTaGCAGACTACTGGGTGCAAA +
Preference number: 5 (lower is better)
Translates to: HYLHEIYAMAFISLLTACEFKLM*QTTGCK
Trigger: TTTGCACCCAGTAGTCTGCAACATGAGTTTAAACTC...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGAAGTGGTACAACGCTTaGCTTGCCTGGATTTTACTT +
Preference number: 5 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMKWYNA*LAWILL
Trigger: AAGTAAAATCCAGGCAAGCAAAGCGTTGTACCACTT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp CTTGATCTTGAAACTCATGATCTGGCCAGAACTGGAAGGAGTGTCACCCTAAAAAAAATTCTTTCCAGATaGAAGTTATCTGGGGAACGC +
Preference number: 5 (lower is better)
Translates to: LDLETHDLARTGRSVTLKKILSR*KLSGER
Trigger: GCGTTCCCCAGATAACTTCAATCTGGAAAGAATTTT...TTTTAGGGTGACACTCCTTCCAGTTCTGGCCAGATCATGAGTTTCAAGATCAAG
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGATGGCCTTCATCTCATaGTTGACTGCATGTCTTACA +
Preference number: 5 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMMAFIS*LTACLT
Trigger: TGTAAGACATGCAGTCAACAATGAGATGAAGGCCAT...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGATGCACATCACAGGCTaGAACTTCCCCGAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: EKFEQTPIQHLLEVILILMHITG*NFPESK
Trigger: CTTGCTCTCGGGGAAGTTCAAGCCTGTGATGTGCAT...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAACACCAAAGCCAGGCTaGTTGGAGTTTATGCACATC +
Preference number: 5 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPTPKPG*LEFMHI
Trigger: GATGTGCATAAACTCCAACAAGCCTGGCTTTGGTGT...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCGAGTACGTGGCATTCTaGCTTGATAGAAACATTTAC +
Preference number: 5 (lower is better)
Translates to: FFKNAPSVSLMSFNPSISEYVAF*LDRNIY
Trigger: GTAAATGTTTCTATCAAGCAAGAATGCCACGTACTC...GGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATCTAGGCCACATGATTaGCAGGGAGAGCTGTTTGTA +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKSRPHD*QGELFV
Trigger: TACAAACAGCTCTCCCTGCAAATCATGTGGCCTAGA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000415167.2
CDS GCA 90 bp GAATCTTCCCGTAATTCCCGATGTTTTCCAAGGTTACTTTCTTCTTaGTGGGTTCGCCTCTCAATGGTTATTCTGTATTTCTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: ESSRNSRCFPRLLSS*WVRLSMVILYFFLK
Trigger: TTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACGGGAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS CCA 90 bp TCTTCCCGTAATTCCCGATGTTTTCCAAGGTTACTTTCTTCTTGCTaGGTTCGCCTCTCAATGGTTATTCTGTATTTCTTCCTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: SSRNSRCFPRLLSSC*VRLSMVILYFFLKK
Trigger: CTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACGGGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGCTTCAAAGTCGTGTTaGTCTCCTCTCTTCCATGAG +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKASKSC*SPLFHE
Trigger: CTCATGGAAGAGAGGAGACAAACACGACTTTGAAGC...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAGGTTACTTTCTTCTaGCTGGGTTCGCCTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKKVTFF*LGSPLN
Trigger: ATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS-3UTR CAA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGGGACACAATCCTTCCTaGCTGTTTCACTTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: EKFEQTPIQHLLEVILILGHNPS*LFHFGE
Trigger: CTCCCCAAAGTGAAACAGCAAGGAAGGATTGTGTCC...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp CCTTCTTGCCTTCTTCTTCCATCCTTTTTGGAATTCGACACTTTTTCCTTTGCAAAGCATCTACGCATTTaGACCTGTATCAATGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSCLLLPSFLEFDTFSFAKHLRI*TCINVS
Trigger: GCTGACATTGATACAGGTCAAAATGCGTAGATGCTT...TGCAAAGGAAAAAGTGTCGAATTCCAAAAAGGATGGAAGAAGAAGGCAAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAGAGATCTGGCTCCCATaGAAACACTTCCATTGTGTT +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKEIWLP*KHFHCV
Trigger: AACACAATGGAAGTGTTTCAATGGGAGCCAGATCTC...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCTAGGCCACATGATTaGCAGGGAGAGCTGTTTGTA +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSRPHD*QGELFV
Trigger: TACAAACAGCTCTCCCTGCAAATCATGTGGCCTAGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326958.5
ENST00000415167.2
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAATGGTCTTTCATTaGACTAGGCGTCCGTGTCCA +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKKMVFH*TRRPCP
Trigger: TGGACACGGACGCCTAGTCAAATGAAAGACCATTTT...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp ATTAAGTCTCCAGACTTACATGATTTGCAGGGAGAGCTGTTTGTATaGTCTACAATTCGGTTTTCATCTATTCTCAGTTTTAAAGGGCCC +
Preference number: 5 (lower is better)
Translates to: IKSPDLHDLQGELFV*STIRFSSILSFKGP
Trigger: GGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCAAATCATGTAAGTCTGGAGACTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506712.1
CDS-3UTR CAA 90 bp CACTATCTGCATGAGATCTATGCAATGGCCTTCATCTCATTGTTGACTGCATGTATGCTCAAAATGTTATaGAGGAAAGACCCCAGTTAT +
Preference number: 5 (lower is better)
Translates to: HYLHEIYAMAFISLLTACMLKML*RKDPSY
Trigger: ATAACTGGGGTCTTTCCTCAATAACATTTTGAGCAT...ACATGCAGTCAACAATGAGATGAAGGCCATTGCATAGATCTCATGCAGATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp ATGTTATTGAGGAAAGACCCCAGTTATGTAATTCCAAGACGGTGCACTCTCATGTGGTTAATGAGAAATTaGAACAAACTCCAATCCAGC +
Preference number: 5 (lower is better)
Translates to: MLLRKDPSYVIPRRCTLMWLMRN*NKLQSS
Trigger: GCTGGATTGGAGTTTGTTCAAATTTCTCATTAACCA...CATGAGAGTGCACCGTCTTGGAATTACATAACTGGGGTCTTTCCTCAATAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TGCTTTTCTTCTGTAAATCCTCCCATCTCACTAATATTTACAACAATCCAGAGTACAGGGGTCACAGAATaGGTCTGTCACAAGGTCTAT +
Preference number: 5 (lower is better)
Translates to: CFSSVNPPISLIFTTIQSTGVTE*VCHKVY
Trigger: ATAGACCTTGTGACAGACCAATTCTGTGACCCCTGT...ACTCTGGATTGTTGTAAATATTAGTGAGATGGGAGGATTTACAGAAGAAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAACACACACACTGGAAATaGAGATTTAGTGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKHTHWK*RFSAPQ
Trigger: CTGTGGAGCACTAAATCTCAATTTCCAGTGTGTGTG...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 90 bp GGTGATGACATACATAGCAAATTAAGTCTCCAGACTTACATGATTTaGAGGGAGAGCTGTTTGTATGCTCTACAATTCGGTTTTCATCTA +
Preference number: 5 (lower is better)
Translates to: GDDIHSKLSLQTYMI*RESCLYALQFGFHL
Trigger: TAGATGAAAACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCAAATCATGTAAGTCTGGAGACTTAATTTGCTATGTATGTCATCACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506712.1
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAACTTCTTATTTGGGCGTaGCTAAGGTTGCTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKLLIWA*LRLLLK
Trigger: TTTCAAAAGCAACCTTAGCAACGCCCAAATAAGAAG...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp AACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATATCATTATTGGTTTGTaGTACACTTCACCCATGCTT +
Preference number: 5 (lower is better)
Translates to: NAPSVSLMSFNPSISLKNIIIGL*YTSPML
Trigger: AAGCATGGGTGAAGTGTACAACAAACCAATAATGAT...ATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGTCTATGCTCAAAATGTTATaGAGGAAAGACCCCAGTTAT +
Preference number: 5 (lower is better)
Translates to: YEFFKNAPSVSLMSFNPSMLKML*RKDPSY
Trigger: ATAACTGGGGTCTTTCCTCAATAACATTTTGAGCAT...AGACGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTCGACACTTTTTCCTTaGCATCCAGCATGGAGAACT +
Preference number: 5 (lower is better)
Translates to: EKFEQTPIQHLLEVILILSTLFP*HPAWRT
Trigger: AGTTCTCCATGCTGGATGCAAAGGAAAAAGTGTCGA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAATGGCCTTCATCTCATaGTTGACTGCATGTCTTACA +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKMAFIS*LTACLT
Trigger: TGTAAGACATGCAGTCAACAATGAGATGAAGGCCAT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp AATTATGAATTCTTCAAGAACGCCCCTTCTGTTTCATTGATGTCTTTCAACCCGGGGGCTACTTCATTGTaGTCTTATAAGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NYEFFKNAPSVSLMSFNPGATSL*SYKMLK
Trigger: CTTCAACATCTTATAAGACAACAATGAAGTAGCCCC...CGGGTTGAAAGACATCAATGAAACAGAAGGGGCGTTCTTGAAGAATTCATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp GTTTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAATCAGGGGCTACTTCATaGTTGTCTTATAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: VSLMSFNPSISLKNLRQKSGATS*LSYKML
Trigger: CAACATCTTATAAGACAACAATGAAGTAGCCCCTGA...TTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTGCTAACACTTAATTCTGCTTGTTCAAATCTCTCCCCTATGAATCATCTCCCAGAGTACGTGGCATTCTaGCTTGATAGAAACATTTAC +
Preference number: 5 (lower is better)
Translates to: LLTLNSACSNLSPMNHLPEYVAF*LDRNIY
Trigger: GTAAATGTTTCTATCAAGCAAGAATGCCACGTACTC...TGGGAGATGATTCATAGGGGAGAGATTTGAACAAGCAGAATTAAGTGTTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAAAAATCTTTCCTGAATTaGCAGAAGGGCAGGCGTTTA +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKKSFLN*QKGRRL
Trigger: TAAACGCCTGCCCTTCTGCAAATTCAGGAAAGATTT...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
39% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS-3UTR CAA 90 bp TTCATTGATGTCTTTCAACCCGTCTATCTCCTTAAAGAATCTCAGGCAGAAAAATCAGGGGCTACTTCATaGTTGTCTTATAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: FIDVFQPVYLLKESQAEKSGATS*LSYKML
Trigger: CAACATCTTATAAGACAACAATGAAGTAGCCCCTGA...TTTTTCTGCCTGAGATTCTTTAAGGAGATAGACGGGTTGAAAGACATCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS GCA 90 bp TATATACTTGTATATATTCGCCCTCCGTTTATACATATACTATTTTaGTTAGAGGTGGCTTCTTATTTGGGCGTTGCTAAGGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: YILVYIRPPFIHILF*LEVASYLGVAKVAF
Trigger: AAAAGCAACCTTAGCAACGCCCAAATAAGAAGCCACCTCTAAGCAAAATAGTATATGTATAAACGGAGGGCGAATATATACAAGTATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS-3UTR CAA 90 bp GAGAAATTTGAACAAACTCCAATCCAGCACCTTTTGGAAGTTATTTTAATCCTGTGTTGTGATTTACACTaGGTAAGTAGGCCCTTTATT +
Preference number: 5 (lower is better)
Translates to: EKFEQTPIQHLLEVILILCCDLH*VSRPFI
Trigger: AATAAAGGGCCTACTTACCAAGTGTAAATCACAACA...CAGGATTAAAATAACTTCCAAAAGGTGCTGGATTGGAGTTTGTTCAAATTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000326958.5
CDS CCA 72 bp ACCTCGATCTTCTGTGGCGGCAGCGCCTCTCTCTCCTaGCGTCCGCCGCCTATGCCCGCGCCACCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: TSIFCGGSASLS*RPPPMPAPPPP
Trigger: CGGCGGCGGTGGCGCGGGCATAGGCGGCGGACGCCAGGAGAGAGAGGCGCTGCCGCCACAGAAGATCGAGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp GCAGAAGCCGCCTCCCAGTCCCGTTGCCCTCCACGCTaGGCAGAGCATACTCGATGGCCGGCCGCACCCGGG +
Preference number: 6 (lower is better)
Translates to: AEAASQSRCPPR*AEHTRWPAAPG
Trigger: CCCGGGTGCGGCCGGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp GGTCCCAGTGCAGATGGCTCCATCGCGGACCTGGTGTaGCCGGCTGGCCCGGGCGTCACCTACACCCCGCCT +
Preference number: 6 (lower is better)
Translates to: GPSADGSIADLV*PAGPGVTYTPP
Trigger: AGGCGGGGTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGCCATCTGCACTGGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp GCTGGAAGCCAGCGGCCAGCGCCCCAGCCGACAGCATaGGCAGGTCCCAGTGCGATGCAAGCCGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: AGSQRPAPQPTA*AGPSAMQAGPL
Trigger: CAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CAA 90 bp ACCTGGAAGCGAGTGCCCGGCGGCAGAAGCCGCCTCCCAGTCCCGTaGCCCTCCACGCTGCGCAGAGCATACTCGATGGCCGGCCGCACC +
Preference number: 6 (lower is better)
Translates to: TWKRVPGGRSRLPVP*PSTLRRAYSMAGRT
Trigger: GGTGCGGCCGGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTCGCTTCCAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 72 bp GTGGAGACCGGAGGGAAGCGGCTCTGGAGAAGTCCGTaGCCAGAGGAGCATCGCGGGAGTCCGCCGCGCGGC +
Preference number: 6 (lower is better)
Translates to: VETGGKRLWRSP*PEEHRGSPPRG
Trigger: GCCGCGCGGCGGACTCCCGCGATGCTCCTCTGGTCACGGACTTCTCCAGAGCCGCTTCCCTCCGGTCTCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 72 bp GAGTGCCCGGCGGCAGAAGCCGCCTCCCAGTCCCGTTaGCCTCCACGCTGCGCAGAGCATACTCGATGGCCG +
Preference number: 6 (lower is better)
Translates to: ECPAAEAASQSR*PPRCAEHTRWP
Trigger: CGGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp GCCAGCGCCCCAGCCGACAGCATGGGCAGGTCCCAGTaGGATGCAAGCCGGGCCACTGGCGCTGCTGCATAC +
Preference number: 6 (lower is better)
Translates to: ASAPADSMGRSQ*DASRATGAAAY
Trigger: GTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 72 bp TGCAGATGGCTCCATCGCGGACCTGGTGTGCCCGGCTaGCCCGGGCGTCACCTACACCCCGCCTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: CRWLHRGPGVPG*PGRHLHPAFLS
Trigger: GCTGAGGAAGGCGGGGTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGCCATCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CAA 72 bp GGCGCCACGCGCGTGAGGTGCGAGTACTCAGAGTCCTaGTGCTGGAAGCCAGCGGCCAGCGCCCCAGCCGAC +
Preference number: 6 (lower is better)
Translates to: GATRVRCEYSES*CWKPAASAPAD
Trigger: GTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 72 bp TGGCGCCCCGCGCCGCCGCCACGCGGTCCACCAAGCTaGAGAGCGCACGGTTCCCACAGTCTGAATCCTCGT +
Preference number: 6 (lower is better)
Translates to: WRPAPPPRGPPS*RAHGSHSLNPR
Trigger: ACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAGCTTGGTGGACCGCGTGGCGGCGGCGCGGGGCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp CGCCCCAGCCGACAGCATGGGCAGGTCCCAGTGCGATaGAAGCCGGGCCACTGGCGCTGCTGCATACTCGCA +
Preference number: 6 (lower is better)
Translates to: RPSRQHGQVPVR*KPGHWRCCILA
Trigger: TGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp GCCACGCGCGTGAGGTGCGAGTACTCAGAGTCCTTGTaGTGGAAGCCAGCGGCCAGCGCCCCAGCCGACAGC +
Preference number: 6 (lower is better)
Translates to: ATRVRCEYSESL*WKPAASAPADS
Trigger: GCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 72 bp ACCAAGGTCCCAGTGCAGATGGCTCCATCGCGGACCTaGTGTGCCCGGCTGGCCCGGGCGTCACCTACACCC +
Preference number: 6 (lower is better)
Translates to: TKVPVQMAPSRT*CARLARASPTP
Trigger: GGGTGTAGGTGACGCCCGGGCCAGCCGGGCACACCAGGTCCGCGATGGAGCCATCTGCACTGGGACCTTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 72 bp CATTCCCTCCTGAAGCACCGACGCGGGGCGAGCACCTaGCCTTCCTGGTCCCTCGGCGCAAGGTCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: HSLLKHRRGAST*PSWSLGARSGN
Trigger: GTTCCCTGACCTTGCGCCGAGGGACCAGGAAGGTCAGGTGCTCGCCCCGCGTCGGTGCTTCAGGAGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326958.5
ENST00000434067.6
ENST00000506712.1
CDS GCA 72 bp GCAGTTCCGCTCCAGCTTGTCGTCGCTGTAGACCAGTaGAGCGCGGCTCCAGTGGTGGTGGCGGAACAGGGC +
Preference number: 6 (lower is better)
Translates to: AVPLQLVVAVDQ*SAAPVVVAEQG
Trigger: GCCCTGTTCCGCCACCACCACTGGAGCCGCGCTGCACTGGTCTACAGCGACGACAAGCTGGAGCGGAACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS GCA 72 bp CCTGGGCCACGCAGGTTTGCGCTGGAATCGCAGCGGTaGCGAGGTCACAGTGTCCCAGCTCACGGACCCTCT +
Preference number: 6 (lower is better)
Translates to: PGPRRFALESQR*RGHSVPAHGPS
Trigger: AGAGGGTCCGTGAGCTGGGACACTGTGACCTCGGCACCGCTGCGATTCCAGCGCAAACCTGCGTGGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp CATGGGCAGGTCCCAGTGCGATGCAAGCCGGGCCACTaGCGCTGCTGCATACTCGCACACTGGCCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: HGQVPVRCKPGH*RCCILAHWPQD
Trigger: ATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTGCCCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 72 bp ACGCGCGTGAGGTGCGAGTACTCAGAGTCCTTGTGCTaGAAGCCAGCGGCCAGCGCCCCAGCCGACAGCATG +
Preference number: 6 (lower is better)
Translates to: TRVRCEYSESLC*KPAASAPADSM
Trigger: CATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACTCGCACCTCACGCGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 72 bp TCGCGGGAGTCCGCCGCGCGGCGGGGCGGGTCAAAATaGAACTGGACCTTCTGTGCCTACTGCAGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: SRESAARRGGSK*NWTFCAYCSQV
Trigger: GACTTGGCTGCAGTAGGCACAGAAGGTCCAGTTCCATTTTGACCCGCCCCGCCGCGCGGCGGACTCCCGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 72 bp TCTCGCCCATCTTGGCGTAGGCGGGCGCCACGCGCGTaGGGTGCGAGTACTCAGAGTCCTTGTGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: SRPSWRRRAPRA*GASTQSPCAGS
Trigger: GCTTCCAGCACAAGGACTCTGAGTACTCGCACCTCACGCGCGTGGCGCCCGCCTACGCCAAGATGGGCGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp GTCCCAGTGCGATGCAAGCCGGGCCACTGGCGCTGCTaGATACTCGCACACTGGCCCCAGGATAAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: VPVRCKPGHWRC*ILAHWPQDKVW
Trigger: CCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS GCA 72 bp CAGGTCCCAGTGCGATGCAAGCCGGGCCACTGGCGCTaGTGCATACTCGCACACTGGCCCCAGGATAAGGTC +
Preference number: 6 (lower is better)
Translates to: QVPVRCKPGHWR*CILAHWPQDKV
Trigger: GACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGCATCGCACTGGGACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 72 bp CCTCCTCCTGGAAGACCTCGTGGACCCCCTCGAGGGTaGAGTAGCAGTTCCGCTCCAGCTTGTCGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PPPGRPRGPPRG*SSSSAPACRRC
Trigger: ACAGCGACGACAAGCTGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCCACGAGGTCTTCCAGGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS GCA 72 bp CCCCCGGGTACGACACACGCTCCCCTCCAACCTGAGTaGTCAAAGATCCAACCGCTCCTTCTCTGGAGCGCT +
Preference number: 6 (lower is better)
Translates to: PPGTTHAPLQPE*SKIQPLLLWSA
Trigger: AGCGCTCCAGAGAAGGAGCGGTTGGATCTTTGAGCACTCAGGTTGGAGGGGAGCGTGTGTCGTACCCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 72 bp GCAACGCCCAGCCGAGTAGTACGCACGGGGAGAAAGTaGGCACCAGCAGAGACGGCATCGTGCCGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: ATPSRVVRTGRK*APAETASCRKK
Trigger: TTTCTTGCGGCACGATGCCGTCTCTGCTGGTGCTCACTTTCTCCCCGTGCGTACTACTCGGCTGGGCGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 72 bp GTCCACCAAGCTGAAGAGCGCACGGTTCCCACAGTCTaGATCCTCGTAAGCCACCTGGAAGCGAGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: VHQAEERTVPTV*ILVSHLEASAR
Trigger: CCGGGCACTCGCTTCCAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAGCTTGGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS TCA 72 bp AGGTCCCCCGGGTACGACACACGCTCCCCTCCAACCTaGGTGCTCAAAGATCCAACCGCTCCTTCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: RSPGYDTRSPPT*VLKDPTAPSLE
Trigger: CTCCAGAGAAGGAGCGGTTGGATCTTTGAGCACTCAGGTTGGAGGGGAGCGTGTGTCGTACCCGGGGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 72 bp TTAGTCTCAGACCGACGCCCTCTTTCGGCAGAAACTTaGACCCGACTCAACCCGGGTGCCGCAGTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: LVSDRRPLSAET*TRLNPGAAVPD
Trigger: GTCTGGGACTGCGGCACCCGGGTTGAGTCGGGTGCAAGTTTCTGCCGAAAGAGGGCGTCGGTCTGAGACTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp CGCACCCGGGTGAGTGAAAACAAGTACGAGTCATCCTaGGGCAGTAACACCAGCACCTCGATCTTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: RTRVSENKYESS*GSNTSTSIFCG
Trigger: GCCACAGAAGATCGAGGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTTGTTTTCACTCACCCGGGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 72 bp AAGGCAAACTGGGGTTTCTGGGGATATGGCAACTTCTaGCGTCAGCGCTCGCCTCCCTTAACAGCACTCTCC +
Preference number: 6 (lower is better)
Translates to: KANWGFWGYGNF*RQRSPPLTALS
Trigger: GGAGAGTGCTGTTAAGGGAGGCGAGCGCTGACGCCAGAAGTTGCCATATCCCCAGAAACCCCAGTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp CTCACTTGCGACGGTGAAAAGGCAAACTGGGGTTTCTaGGGATATGGCAACTTCTGGCGTCAGCGCTCGCCT +
Preference number: 6 (lower is better)
Translates to: LTCDGEKANWGF*GYGNFWRQRSP
Trigger: AGGCGAGCGCTGACGCCAGAAGTTGCCATATCCCCAGAAACCCCAGTTTGCCTTTTCACCGTCGCAAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 72 bp CACGGACCCTCTGTCAGCGCACTGAGAGCAGGAAAGTaGAACTTGTTGCTCCCAAAGGCGAGGGAATGGTTC +
Preference number: 6 (lower is better)
Translates to: HGPSVSALRAGK*NLLLPKAREWF
Trigger: GAACCATTCCCTCGCCTTTGGGAGCAACAAGTTTCACTTTCCTGCTCTCAGTGCGCTGACAGAGGGTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 72 bp ACAGTGTCCCAGCTCACGGACCCTCTGTCAGCGCACTaGGAGCAGGAAAGTGAAACTTGTTGCTCCCAAAGG +
Preference number: 6 (lower is better)
Translates to: TVSQLTDPLSAH*EQESETCCSQR
Trigger: CCTTTGGGAGCAACAAGTTTCACTTTCCTGCTCTCAGTGCGCTGACAGAGGGTCCGTGAGCTGGGACACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp GCTCTGGTTCTCACTTGCGACGGTGAAAAGGCAAACTaGGGTTTCTGGGGATATGGCAACTTCTGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: ALVLTCDGEKAN*GFWGYGNFWRQ
Trigger: CTGACGCCAGAAGTTGCCATATCCCCAGAAACCCCAGTTTGCCTTTTCACCGTCGCAAGTGAGAACCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS TCA 72 bp AGGCCTTTAACGCGCTCTGGTTCTCACTTGCGACGGTaGAAAGGCAAACTGGGGTTTCTGGGGATATGGCAA +
Preference number: 6 (lower is better)
Translates to: RPLTRSGSHLRR*KGKLGFLGIWQ
Trigger: TTGCCATATCCCCAGAAACCCCAGTTTGCCTTTTCACCGTCGCAAGTGAGAACCAGAGCGCGTTAAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 72 bp GGCGGGTCAAAATGGAACTGGACCTTCTGTGCCTACTaGAGCCAAGTCATTTGCAATGTGAACGGGCTACAC +
Preference number: 6 (lower is better)
Translates to: GGSKWNWTFCAY*SQVICNVNGLH
Trigger: GTGTAGCCCGTTCACATTGCAAATGACTTGGCTGCAGTAGGCACAGAAGGTCCAGTTCCATTTTGACCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp CCAGATCCAAGTCTTTGGTCTCGTCGAAACTGTAGATaGACGTGTGCAAACCCTCCTCCTGGAAGACCTCGT +
Preference number: 6 (lower is better)
Translates to: PDPSLWSRRNCR*TCANPPPGRPR
Trigger: ACGAGGTCTTCCAGGAGGAGGGTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS CCA 72 bp CTGCTCGCACACATGATCACCACTCTCTCACTGGCCTaGATATTGCGCACGATGTCTTCCAGATCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: LLAHMITTLSLA*ILRTMSSRSKS
Trigger: AGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGATCATGTGTGCGAGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CCA 72 bp TGGCAATCACAGAGAAATCCCCATATCGGTCTCCGTTaGCATCTATGGACACCTGCCCGGCGATACCTTCAA +
Preference number: 6 (lower is better)
Translates to: WQSQRNPHIGLR*HLWTPARRYLQ
Trigger: TTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTGTGATTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CAA 72 bp ATGGCAATCACAGAGAAATCCCCATATCGGTCTCCGTaGGCATCTATGGACACCTGCCCGGCGATACCTTCA +
Preference number: 6 (lower is better)
Translates to: MAITEKSPYRSP*ASMDTCPAIPS
Trigger: TGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTGTGATTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CAA 72 bp GAGGGAATGGTTCAACTTCTGGAGGTGTCACAAAGCTaGGAAAGCATCCCCAAAGCGTCCTCGGGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: EGMVQLLEVSQS*ESIPKASSGLC
Trigger: ACAAAGCCCCGAGGACGCTTTGGGGATGCTTTCCAAGCTTTGTGACACCTCCAGAAGTTGAACCATTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CAA 90 bp CCCAAAGGCGAGGGAATGGTTCAACTTCTGGAGGTGTCACAAAGCTaGGAAAGCATCCCCAAAGCGTCCTCGGGGCTTTGTTTGCTAAAC +
Preference number: 6 (lower is better)
Translates to: PKGEGMVQLLEVSQS*ESIPKASSGLCLLN
Trigger: GTTTAGCAAACAAAGCCCCGAGGACGCTTTGGGGATGCTTTCCAAGCTTTGTGACACCTCCAGAAGTTGAACCATTCCCTCGCCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp CAGAGAAATCCCCATATCGGTCTCCGTTGGCATCTATaGACACCTGCCCGGCGATACCTTCAAATGTTCTGT +
Preference number: 6 (lower is better)
Translates to: QRNPHIGLRWHL*TPARRYLQMFC
Trigger: ACAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CCA 72 bp AGGGAATGGTTCAACTTCTGGAGGTGTCACAAAGCTTaGAAAGCATCCCCAAAGCGTCCTCGGGGCTTTGTT +
Preference number: 6 (lower is better)
Translates to: REWFNFWRCHKA*KASPKRPRGFV
Trigger: AACAAAGCCCCGAGGACGCTTTGGGGATGCTTTCCAAGCTTTGTGACACCTCCAGAAGTTGAACCATTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CAA 72 bp GCACACATGATCACCACTCTCTCACTGGCCTGGATATaGCGCACGATGTCTTCCAGATCCAAGTCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: AHMITTLSLAWI*RTMSSRSKSLV
Trigger: GACCAAAGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGATCATGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265074.13
ENST00000415167.2
CDS CAA 90 bp ACATCAGTCATGGCAATCACAGAGAAATCCCCATATCGGTCTCCGTaGGCATCTATGGACACCTGCCCGGCGATACCTTCAAATGTTCTG +
Preference number: 6 (lower is better)
Translates to: TSVMAITEKSPYRSP*ASMDTCPAIPSNVL
Trigger: CAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTGTGATTGCCATGACTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CCA 72 bp TTGTTGCTCCCAAAGGCGAGGGAATGGTTCAACTTCTaGAGGTGTCACAAAGCTTGGAAAGCATCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: LLLPKAREWFNF*RCHKAWKASPK
Trigger: CTTTGGGGATGCTTTCCAAGCTTTGTGACACCTCCAGAAGTTGAACCATTCCCTCGCCTTTGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 72 bp CTCAGTAGAGTGACTGTCTGGAGGGACGAGTATGCTTaGTTAGCTTCAAAGTCGTGTTTGTCTCCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LSRVTVWRDEYA*LASKSCLSPLF
Trigger: GAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAGACAGTCACTCTACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CCA 72 bp GGATATTGCGCACGATGTCTTCCAGATCCAAGTCTTTaGTCTCGTCGAAACTGTAGATGGACGTGTGCAAAC +
Preference number: 6 (lower is better)
Translates to: GYCARCLPDPSL*SRRNCRWTCAN
Trigger: GTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGGAAGACATCGTGCGCAATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265074.13
ENST00000415167.2
ENST00000507141.1
CDS CCA 72 bp AACTCAGGTTTCACTGTCCTCAGTAGAGTGACTGTCTaGAGGGACGAGTATGCTTGCTTAGCTTCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: NSGFTVLSRVTV*RDEYACLASKS
Trigger: CGACTTTGAAGCTAAGCAAGCATACTCGTCCCTCCAGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
ENST00000506712.1
ENST00000509104.5
CDS CAA 90 bp GGATTCCAACAGATAAGACCTAAAACTCTCTCACTGGCCTGGATATaGCGCACGATGTCTTCCAGATCCAAGTCTTTGGTCTCGTCGAAA +
Preference number: 6 (lower is better)
Translates to: GFQQIRPKTLSLAWI*RTMSSRSKSLVSSK
Trigger: TTTCGACGAGACCAAAGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTTTTAGGTCTTATCTGTTGGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS CAA 72 bp CAGATAAGACCTAAAACTCTCTCACTGGCCTGGATATaGCGCACGATGTCTTCCAGATCCAAGTCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: QIRPKTLSLAWI*RTMSSRSKSLV
Trigger: GACCAAAGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTTTTAGGTCTTATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS CCA 72 bp TTCCAACAGATAAGACCTAAAACTCTCTCACTGGCCTaGATATTGCGCACGATGTCTTCCAGATCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: FQQIRPKTLSLA*ILRTMSSRSKS
Trigger: AGACTTGGATCTGGAAGACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTTTTAGGTCTTATCTGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507141.1
CDS TCA 72 bp TGCAATGTGAACGGGCTACACTGGGCGGGAGAATTCTaGCAATTAAGTCCCGCACATTTAAATACATTGAAA +
Preference number: 6 (lower is better)
Translates to: CNVNGLHWAGEF*QLSPAHLNTLK
Trigger: TTTCAATGTATTTAAATGTGCGGGACTTAATTGTCAGAATTCTCCCGCCCAGTGTAGCCCGTTCACATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS GCA 72 bp CGTAATTCCCGATGTTTTCCAAGGTTACTTTCTTCTTaGTGGGTTCGCCTCTCAATGGTTATTCTGTATTTC +
Preference number: 6 (lower is better)
Translates to: RNSRCFPRLLSS*WVRLSMVILYF
Trigger: GAAATACAGAATAACCATTGAGAGGCGAACCCAGCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265074.13
ENST00000326958.5
ENST00000415167.2
ENST00000434067.6
CDS GCA 72 bp GTATATATTCGCCCTCCGTTTATACATATACTATTTTaGTTAGAGGTGGCTTCTTATTTGGGCGTTGCTAAG +
Preference number: 6 (lower is better)
Translates to: VYIRPPFIHILF*LEVASYLGVAK
Trigger: CTTAGCAACGCCCAAATAAGAAGCCACCTCTAAGCAAAATAGTATATGTATAAACGGAGGGCGAATATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265074.13
CDS GCA 72 bp ATACATAGCAAATTAAGTCTCCAGACTTACATGATTTaGAGGGAGAGCTGTTTGTATGCTCTACAATTCGGT +
Preference number: 6 (lower is better)
Translates to: IHSKLSLQTYMI*RESCLYALQFG
Trigger: ACCGAATTGTAGAGCATACAAACAGCTCTCCCTGCAAATCATGTAAGTCTGGAGACTTAATTTGCTATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506712.1
CDS CAA 72 bp AATTCCACAAACAGGGTAATCCACACACACTGGAAATaGAGATTTAGTGCTCCACAGCAATTAAATCTTTCC +
Preference number: 6 (lower is better)
Translates to: NSTNRVIHTHWK*RFSAPQQLNLS
Trigger: GGAAAGATTTAATTGCTGTGGAGCACTAAATCTCAATTTCCAGTGTGTGTGGATTACCCTGTTTGTGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434067.6
CDS CCA 72 bp TGTTTAAAGGATGTTATCTCTTTGGTTCTGAGGAGCTaGAAAGTAACCACAAACTTGAAAAATCAGAACGAG +
Preference number: 6 (lower is better)
Translates to: CLKDVISLVLRS*KVTTNLKNQNE
Trigger: CTCGTTCTGATTTTTCAAGTTTGTGGTTACTTTCCAGCTCCTCAGAACCAAAGAGATAACATCCTTTAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506712.1
CDS CAA 72 bp ATACATATACTATTTTGCTTAGAGGTGGCTTCTTATTaGGGCGTTGCTAAGGTTGCTTTTGAAAGCGTTTTT +
Preference number: 6 (lower is better)
Translates to: IHILFCLEVASY*GVAKVAFESVF
Trigger: AAAAACGCTTTCAAAAGCAACCTTAGCAACGCCCAAATAAGAAGCCACCTCTAAGCAAAATAGTATATGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265074.13