RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPNT (Homo sapiens)

Ensembl gene IDs: ENSG00000168743

Ensembl transcript IDs: ENST00000305572.12, ENST00000379987.7, ENST00000427316.6, ENST00000453617.6, ENST00000503451.5, ENST00000504304.5, ENST00000504787.1, ENST00000505821.1, ENST00000505917.1, ENST00000506056.5, ENST00000506666.5, ENST00000511518.1, ENST00000513430.5, ENST00000514622.5, ENST00000514632.1, ENST00000514837.1

Found 771 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAGGACAGTGAGCTGACGGCCAACCCCTGTGCCCAAGTGTGCTaGTCCGCTCAACTCCATGTGCACCAGGGAACAGCCATTCTCTGC +
Preference number: 1 (lower is better)
Translates to: QQDSELTANPCAQVC*SAQLHVHQGTAILC
Trigger: GCAGAGAATGGCTGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAGCTCACTGTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR TCA 90 bp GGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGCCTGATAAAAGGGAGAAGAGGAGAG +
Preference number: 1 (lower is better)
Translates to: GQKNLGHQIDFLLTH*PTLLLGLIKGRRGE
Trigger: CTCTCCTCTTCTCCCTTTTATCAGGCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR TCA 90 bp CCGCTCAACTCCATGTGCACCAGGGAACAGCCATTCTCTGCAGGCTaGTTTGATCTGGAACCACAATTGAGTCTAGTTCTGGAATCTCAG +
Preference number: 1 (lower is better)
Translates to: PLNSMCTREQPFSAG*FDLEPQLSLVLESQ
Trigger: CTGAGATTCCAGAACTAGACTCAATTGTGGTTCCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCACATGGAGTTGAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR GCA 90 bp CAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCA +
Preference number: 1 (lower is better)
Translates to: QDGRQHPQMALMCLR*PCISRRVSLFIGIA
Trigger: TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR GCA 90 bp GGGAGGAAATACAGTTGGGGGTTCATGGATCTTAGAATTCCAACTTaGCCTGCTCCTCCAGTGTGTGTAAATCCCGTTCCAACACATCCC +
Preference number: 1 (lower is better)
Translates to: GRKYSWGFMDLRIPT*PAPPVCVNPVPTHP
Trigger: GGGATGTGTTGGAACGGGATTTACACACACTGGAGGAGCAGGGCAAGTTGGAATTCTAAGATCCATGAACCCCCAACTGTATTTCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR TCA 90 bp CAACTCCATGTGCACCAGGGAACAGCCATTCTCTGCAGGCTGATTTaGTCTGGAACCACAATTGAGTCTAGTTCTGGAATCTCAGACACA +
Preference number: 1 (lower is better)
Translates to: QLHVHQGTAILCRLI*SGTTIESSSGISDT
Trigger: TGTGTCTGAGATTCCAGAACTAGACTCAATTGTGGTTCCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCACATGGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR GCA 90 bp CTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTaGCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTC +
Preference number: 1 (lower is better)
Translates to: LFLVHMENSWSPPSL*QPFIYLKTINGLPL
Trigger: GAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR GCA 90 bp TGTAAATCCCGTTCCAACACATCCCATGCCTCTAAGCATGGGACTTaGTTCCTATCCCATCCTGACACAGCACAACATGAGCAACATAAG +
Preference number: 1 (lower is better)
Translates to: CKSRSNTSHASKHGT*FLSHPDTAQHEQHK
Trigger: CTTATGTTGCTCATGTTGTGCTGTGTCAGGATGGGATAGGAAGCAAGTCCCATGCTTAGAGGCATGGGATGTGTTGGAACGGGATTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR GCA 90 bp TCACTCCGTTACCACAACCCAACACTTCTGCCAATTTCCTACTGCTaGCAATATAAGGTCATGGAACTGGATGACATTTCACCATGTATT +
Preference number: 1 (lower is better)
Translates to: SLRYHNPTLLPISYC*QYKVMELDDISPCI
Trigger: AATACATGGTGAAATGTCATCCAGTTCCATGACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTGGTAACGGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR TCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: RQHPQMALMCLRCPCISRFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR-3UTR TCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR-3UTR TCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR-3UTR CCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCGAGCTCAGCATTTGGTaGGCTCTTCCCCTTTCAATC +
Preference number: 2 (lower is better)
Translates to: SILSAYGEQLVATLSVPTELSIW*ALPLSI
Trigger: GATTGAAAGGGGAAGAGCCCACCAAATGCTGAGCTC...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR CAA 90 bp TTCCTGAAAGAGACACAGGATGGAAGGCAACACCCACAGATGGCTTaGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTG +
Preference number: 2 (lower is better)
Translates to: FLKETQDGRQHPQMA*MCLRCPCISRRVSL
Trigger: CAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR-3UTR CCA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTCTTGAAAACCATCAATaGTTTGCCCCTCAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTLENHQ*FAPQSS
Trigger: AGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAG...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR CCA 90 bp CCATGTGCACCAGGGAACAGCCATTCTCTGCAGGCTGATTTGATCTGGAACCACGGAATCTCAGACACATaGAGAACTACACCTTGTCTC +
Preference number: 2 (lower is better)
Translates to: PCAPGNSHSLQADLIWNHGISDT*RTTPCL
Trigger: GAGACAAGGTGTAGTTCTCCATGTGTCTGAGATTCC...GTGGTTCCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR CAA 90 bp CCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTaGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: PSLCQPFIYLKTING*PLSLLFSRLNNPSS
Trigger: GGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR TCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTATCATACTGATGAGGTaGAGGAAAGGTCTGCCGGTG +
Preference number: 2 (lower is better)
Translates to: LVTHEAERMHPMKISLNCIILMR*RKGLPV
Trigger: CACCGGCAGACCTTTCCTTCACCTCATCAGTATGAT...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
3UTR-3UTR GCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAAACCATCAATGGTTTaGCCCTCAGTCTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: RQHPQMALMCLRCPCISRKPSMV*PSVFSS
Trigger: AGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTT...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR GCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTGCCAATTTCCTACTaGTGCCAATATAAGGTCATG +
Preference number: 2 (lower is better)
Translates to: SILSAYGEQLVATLSVPTLPISY*CQYKVM
Trigger: CATGACCTTATATTGGCAGCAGTAGGAAATTGGCAG...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTGAGCTCAGCATTTGGTaGGCTCTTCCCCTTTCAATC +
Preference number: 2 (lower is better)
Translates to: LVTHEAERMHPMKISLNCELSIW*ALPLSI
Trigger: GATTGAAAGGGGAAGAGCCCACCAAATGCTGAGCTC...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
3UTR-3UTR CCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR-3UTR CCA 90 bp GTTCCAACACATCCCATGCCTCTAAGCATGGGACTTGCTTCCTATCCCATCCTGAATATTACTGTTCTGTaGAACCTGGGAGAGTCCAAT +
Preference number: 2 (lower is better)
Translates to: VPTHPMPLSMGLASYPILNITVL*NLGESN
Trigger: ATTGGACTCTCCCAGGTTCCACAGAACAGTAATATT...CAGGATGGGATAGGAAGCAAGTCCCATGCTTAGAGGCATGGGATGTGTTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTGAAAGAGACACAGGATaGAAGGCAACACCCACAGAT +
Preference number: 2 (lower is better)
Translates to: LVTHEAERMHPMKISLNCERDTG*KATPTD
Trigger: ATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTC...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CCA 90 bp CAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCAATTTCAGGATGGAGGATGGTATaGCTCACGCATGCTGAATGC +
Preference number: 2 (lower is better)
Translates to: QSSGQARTNLSEEGKSISGWRMV*LTHAEC
Trigger: GCATTCAGCATGCGTGAGCCATACCATCCTCCATCC...TGAAATTGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379987.7
ENST00000514622.5
3UTR-3UTR TCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR GCA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTCTCACGCATGCTGAATaGCTTCCTGAAAGAGACACA +
Preference number: 2 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGLTHAE*LPERDT
Trigger: TGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAG...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCATAAGGTCATGGAACTaGATGACATTTCACCATGTA +
Preference number: 2 (lower is better)
Translates to: SILSAYGEQLVATLSVPTIRSWN*MTFHHV
Trigger: TACATGGTGAAATGTCATCCAGTTCCATGACCTTAT...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CCA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR GCA 90 bp AAAAGTCAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCATCTAACAATGGCCCCTaGCAAGAAATGCTCCCTTAT +
Preference number: 2 (lower is better)
Translates to: KSQSSGQARTNLSEEGKSSNNGP*QEMLPY
Trigger: ATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGA...TGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCAAGTGAGCTCAGCATTTaGTGGGCTCTTCCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPSELSI*WALPLS
Trigger: TGAAAGGGGAAGAGCCCACCAAATGCTGAGCTCACT...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
3UTR-3UTR CCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAGAAAGAGACACAGGATaGAAGGCAACACCCACAGAT +
Preference number: 2 (lower is better)
Translates to: VHHISREVNTTHGTTPNTERDTG*KATPTD
Trigger: ATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTC...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: VHHISREVNTTHGTTPNTGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTAATCAGGATGGAGGATaGTATGGCTCACGCATGCTG +
Preference number: 2 (lower is better)
Translates to: FHKHIVHHISREVNTTHGNQDGG*YGSRML
Trigger: CAGCATGCGTGAGCCATACCATCCTCCATCCTGATT...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
3UTR CAA 90 bp CAAAGATTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTaGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGC +
Preference number: 2 (lower is better)
Translates to: QRFLLKTAPVTHSHN*LQGAPCNQDGGWYG
Trigger: GCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR GCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCATCTAACAATGGCCCCTaGCAAGAAATGCTCCCTTAT +
Preference number: 2 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPSNNGP*QEMLPY
Trigger: ATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGA...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR GCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCATTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGALMCLR*PCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAA...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR GCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTAAAACCATCAATGGTTTaGCCCTCAGTCTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLKPSMV*PSVFSS
Trigger: AGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTT...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR GCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHITVHWD*TKAGQK
Trigger: TTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGT...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CCA 90 bp TTTACACAAAACACAATACTACTAAGGAGGGATTACGTGCCCACTCTACATAATCTTGAAAACCATCAATaGTTTGCCCCTCAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: FTQNTILLRRDYVPTLHNLENHQ*FAPQSS
Trigger: AGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAG...ATTATGTAGAGTGGGCACGTAATCCCTCCTTAGTAGTATTGTGTTTTGTGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR GCA 72 bp AGTGAGCTGACGGCCAACCCCTGTGCCCAAGTGTGCTaGTCCGCTCAACTCCATGTGCACCAGGGAACAGCC +
Preference number: 3 (lower is better)
Translates to: SELTANPCAQVC*SAQLHVHQGTA
Trigger: GGCTGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAGCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR GCA 72 bp GACAGTGAGCTGACGGCCAACCCCTGTGCCCAAGTGTaGTGCTCCGCTCAACTCCATGTGCACCAGGGAACA +
Preference number: 3 (lower is better)
Translates to: DSELTANPCAQV*CSAQLHVHQGT
Trigger: TGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAGCTCACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR-3UTR CAA 90 bp GACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCAGATCTGGAACCACAATaGAGTCTAGTTCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: DGQPLCPSVLLRSTPCAPDLEPQ*SLVLES
Trigger: AGATTCCAGAACTAGACTCAATTGTGGTTCCAGATC...TGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR-3UTR CAA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTAGCAGCCAAGATAACTaGTCACACACGAAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTSSQDN*SHTKQR
Trigger: TCTCTGCTTCGTGTGTGACAAGTTATCTTGGCTGCT...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
3UTR GCA 72 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATaGCTTCCTGAAAGAGACACAGGATGGAAGGCAACA +
Preference number: 3 (lower is better)
Translates to: SGWRMVWLTHAE*LPERDTGWKAT
Trigger: TGTTGCCTTCCATCCTGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR GCA 72 bp CGTTCCAACACATCCCATGCCTCTAAGCATGGGACTTaGTTCCTATCCCATCCTGACACAGCACAACATGAG +
Preference number: 3 (lower is better)
Translates to: RSNTSHASKHGT*FLSHPDTAQHE
Trigger: CTCATGTTGTGCTGTGTCAGGATGGGATAGGAAGCAAGTCCCATGCTTAGAGGCATGGGATGTGTTGGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CAA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: SGWRMVWLTHAECLPERDGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR TCA 72 bp AACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGCCTGATAAAAGGGAGA +
Preference number: 3 (lower is better)
Translates to: NLGHQIDFLLTH*PTLLLGLIKGR
Trigger: TCTCCCTTTTATCAGGCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR TCA 72 bp GTGCACCAGGGAACAGCCATTCTCTGCAGGCTGATTTaGTCTGGAACCACAATTGAGTCTAGTTCTGGAATC +
Preference number: 3 (lower is better)
Translates to: VHQGTAILCRLI*SGTTIESSSGI
Trigger: GATTCCAGAACTAGACTCAATTGTGGTTCCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
3UTR GCA 72 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGGGTATCACTGTTCATT +
Preference number: 3 (lower is better)
Translates to: RQHPQMALMCLR*PCISRRVSLFI
Trigger: AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR GCA 72 bp TACAGTTGGGGGTTCATGGATCTTAGAATTCCAACTTaGCCTGCTCCTCCAGTGTGTGTAAATCCCGTTCCA +
Preference number: 3 (lower is better)
Translates to: YSWGFMDLRIPT*PAPPVCVNPVP
Trigger: TGGAACGGGATTTACACACACTGGAGGAGCAGGGCAAGTTGGAATTCTAAGATCCATGAACCCCCAACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR CCA 72 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTaGTCGCCACCCTCTCTGTGCCAACCCTTCATATAC +
Preference number: 3 (lower is better)
Translates to: PLVLFLVHMENS*SPPSLCQPFIY
Trigger: GTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR CAA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGAGCAGCCAAGATAACTaGTCACACACGAAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: SCSILSAYGEQLVATLSVSSQDN*SHTKQR
Trigger: TCTCTGCTTCGTGTGTGACAAGTTATCTTGGCTGCT...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR CAA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCCACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 3 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CAA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATCACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 3 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CAA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATACAACCCTTCATATACTaGAAAACCATCAATGGTTTG +
Preference number: 3 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIQPFIY*KTINGL
Trigger: CAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
3UTR-3UTR CAA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CAA 90 bp TGTAAATCCCGTTCCAACACATCCCATGCCTCTAAGCATGGGACTTGCTTCCTAAAGGTTTCCTATCCTTaGCAGAGATCAAACTCAAGG +
Preference number: 3 (lower is better)
Translates to: CKSRSNTSHASKHGTCFLKVSYP*QRSNSR
Trigger: CCTTGAGTTTGATCTCTGCAAAGGATAGGAAACCTT...TAGGAAGCAAGTCCCATGCTTAGAGGCATGGGATGTGTTGGAACGGGATTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR GCA 72 bp CTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAAAACCTGGGTCACCAA +
Preference number: 3 (lower is better)
Translates to: LYFKEGITVHWD*TKAGQKNLGHQ
Trigger: TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
3UTR-3UTR CAA 90 bp AAGTCAATTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACCACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 3 (lower is better)
Translates to: KSISQAHCTSYLKGSQYYHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...GTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAATTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
3UTR GCA 72 bp CGTTACCACAACCCAACACTTCTGCCAATTTCCTACTaGTGCCAATATAAGGTCATGGAACTGGATGACATT +
Preference number: 3 (lower is better)
Translates to: RYHNPTLLPISY*CQYKVMELDDI
Trigger: AATGTCATCCAGTTCCATGACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTGGTAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CAA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACACACTGTTCATTGGGATaGCACAAAAGCAGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: VHHISREVNTTHGTTPNTHCSLG*HKSRPE
Trigger: TTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTG...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR-3UTR CAA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: VHHISREVNTTHGTTPNTGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR GCA 72 bp TACCACAACCCAACACTTCTGCCAATTTCCTACTGCTaGCAATATAAGGTCATGGAACTGGATGACATTTCA +
Preference number: 3 (lower is better)
Translates to: YHNPTLLPISYC*QYKVMELDDIS
Trigger: TGAAATGTCATCCAGTTCCATGACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCAACCCTTCATATACTaGAAAACCATCAATGGTTTG +
Preference number: 3 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQQPFIY*KTINGL
Trigger: CAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR-3UTR CAA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: IISQGKSILLMVQHRTHNGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
3UTR CCA 72 bp AATATATTGGTAAAATATGCAGGGAGGAAATACAGTTaGGGGTTCATGGATCTTAGAATTCCAACTTGCCCT +
Preference number: 3 (lower is better)
Translates to: NILVKYAGRKYS*GFMDLRIPTCP
Trigger: AGGGCAAGTTGGAATTCTAAGATCCATGAACCCCCAACTGTATTTCCTCCCTGCATATTTTACCAATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp CTGACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACAGCAGGACAGTGAGCTaGCGGCCAACCCCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LTANPCAQVCCSAQLHVHSRTVS*RPTPVP
Trigger: GGGCACAGGGGTTGGCCGTCAGCTCACTGTCCTGCT...GTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR TCA 90 bp CTGACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACGTGGCAGCAGGACAGTaGGCTGACGGCCAACCCCTG +
Preference number: 4 (lower is better)
Translates to: LTANPCAQVCCSAQLHVHVAAGQ*ADGQPL
Trigger: CAGGGGTTGGCCGTCAGCTCACTGTCCTGCTGCCAC...GTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CCA 90 bp GAGCTGACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCAGCAGCCTCTGAGGTaGTGGAGGGTGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELTANPCAQVCCSAQLHVQQPLR*WRVAAG
Trigger: TCCTGCTGCCACCCTCCACCACCTCAGAGGCTGCTG...CACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp CTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCAGGGAACAGCCATGACGGCCAACCCCTGTaGCCAAGTGTGCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LCPSVLLRSTPCAPGNSHDGQPL*PSVLLR
Trigger: GCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTC...ATGGCTGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCGCCCGGGCTACTGCTaGCGCTCCCGGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHRPGYC*RSRRTA
Trigger: CGCTGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGCGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLRRPGY*CRSRRT
Trigger: TGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCG...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CTGACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCCCTGTGCCCAAGTGTaGTGCTCCGCTCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: LTANPCAQVCCSAQLHVHPCAQV*CSAQLH
Trigger: ATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGG...GTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCATTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISLGSGS*GAAQWR
Trigger: GCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAA...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGTGGGAGGCGCCCCTCTaGGAGTCTCGAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRWEAPL*ESRGTP
Trigger: GGGGGTTCCTCGAGACTCTCAGAGGGGCGCCTCCCA...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCATGTGCCCAAGTGTGCTaGTCCGCTCAACTCCATGTG +
Preference number: 4 (lower is better)
Translates to: DGQPLCPSVLLRSTPCAPCAQVC*SAQLHV
Trigger: CACATGGAGTTGAGCGGAGCAGCACACTTGGGCACA...TGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR TCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGCAGGCACAGGTCCCCTaGATGCATGAGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRQAQVP*MHEAAE
Trigger: CTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTG...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGCGCCCGGGCTACTGCTaGCGCTCCCGGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGRPGYC*RSRRTA
Trigger: CGCTGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCG...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCACGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHARRPGY*CRSRRT
Trigger: TGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCG...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIARRPGY*CRSRRT
Trigger: TGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCGCGCGAGGAACAGGTTaGGGTGGTGGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTARGTG*GGGRRW
Trigger: CCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGC...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACGCGCGAGGAACAGGTTaGGGTGGTGGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHARGTG*GGGRRW
Trigger: CCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGC...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACTGGGGCGCAGCGCAGTaGCGCGCGAGGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGWRMVWLTHAECLPERDWGAAQ*RARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCA...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCATGGGGCGCAGCGCAGTaGCGCGCGAGGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISWGAAQ*RARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCA...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCTTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTLGSGS*GAAQWR
Trigger: GCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAA...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGCAGGCACAGGTCCCCTaGATGCATGAGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLQAQVP*MHEAAE
Trigger: CTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTG...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAACGCCCGGGCTACTGCTaGCGCTCCCGGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKRPGYC*RSRRTA
Trigger: CGCTGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCG...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAACAGGTTGGGGTaGTGGGCGCCGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISRNRLG*WAPMGG
Trigger: GCCTCCCATCGGCGCCCACCACCCCAACCTGTTCCT...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGGCGCGAGGAACAGGTTaGGGTGGTGGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LVATLSVPTLHILENHQWARGTG*GGGRRW
Trigger: CCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGC...CCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCTGGGGCGCAGCGCAGTaGCGCGCGAGGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCWGAAQ*RARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCA...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTTTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCLGSGS*GAAQWR
Trigger: GCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAA...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAATTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQLGSGS*GAAQWR
Trigger: GCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAA...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCACTGTCCCCAAGACTaGCGAGCCCAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHHCPQD*RAQPQQ
Trigger: CTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACCACTGTCCCCAAGACTaGCGAGCCCAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGWRMVWLTHAECLPERDHCPQD*RAQPQQ
Trigger: CTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTG...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGCACTGTCCCCAAGACTaGCGAGCCCAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRHCPQD*RAQPQQ
Trigger: CTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTG...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGCAGGCCAGGGGATaGGCACTGGCACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPLQARG*ALAPYL
Trigger: CAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAG...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGGGAGGCGCCCCTCTaGGAGTCTCGAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHAWEAPL*ESRGTP
Trigger: GGGGGTTCCTCGAGACTCTCAGAGGGGCGCCTCCCA...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCTGGGAGGCGCCCCTCTaGGAGTCTCGAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGWEAPL*ESRGTP
Trigger: GGGGGTTCCTCGAGACTCTCAGAGGGGCGCCTCCCA...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCGGTCCCCTGAATGCATaGGGCGGCCGAGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACGPLNA*GGREVA
Trigger: TGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACC...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp GAGCTGACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCTCTGCAGGCTGATTTaGTCTGGAACCACAATTGAG +
Preference number: 4 (lower is better)
Translates to: ELTANPCAQVCCSAQLHVLCRLI*SGTTIE
Trigger: CTCAATTGTGGTTCCAGATCAAATCAGCCTGCAGAG...CACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSRRPGY*CRSRRT
Trigger: TGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCG...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGACGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGRRPGY*CRSRRT
Trigger: TGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCG...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGAGGAACAGGTTGGGGTaGTGGGCGCCGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGRNRLG*WAPMGG
Trigger: GCCTCCCATCGGCGCCCACCACCCCAACCTGTTCCT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGGCGCGAGGAACAGGTTaGGGTGGTGGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGARGTG*GGGRRW
Trigger: CCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGC...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTTGGGAGGCGCCCCTCTaGGAGTCTCGAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFIWEAPL*ESRGTP
Trigger: GGGGGTTCCTCGAGACTCTCAGAGGGGCGCCTCCCA...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCGCAGGTCAGGGCACTTaGGCAGGAACCATCCGGCAT +
Preference number: 4 (lower is better)
Translates to: SILSAYGEQLVATLSVPTAGQGT*AGTIRH
Trigger: ATGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGC...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCACAGGCACAGGTCCCCTaGATGCATGAGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHAQAQVP*MHEAAE
Trigger: CTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTG...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAGGCACAGGTCCCCTaGATGCATGAGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLQAQVP*MHEAAE
Trigger: CTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTG...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCCGTCACCTTGTGCCTaGATGACAGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTPSPCA*MTGTGP
Trigger: GGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGG...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCCGCCCGGGCTACTGCTaGCGCTCCCGGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFRPGYC*RSRRTA
Trigger: CGCTGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCG...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCCGCCCGGGCTACTGCTaGCGCTCCCGGAGGACAGCG +
Preference number: 4 (lower is better)
Translates to: QGKSILLMVQHRTHNIIARPGYC*RSRRTA
Trigger: CGCTGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCG...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGGTGTTCATGCACCTGTaGTTACAGGGCCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRVFMHL*LQGRGF
Trigger: GAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACAC...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACAGGTCCCCTGAATaGATGAGGCGGCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTHRSPE*MRRPRG
Trigger: ACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTG...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCCACAGGTCCCCTGAATaGATGAGGCGGCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFHRSPE*MRRPRG
Trigger: ACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTG...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACWSVPE*SPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCA...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCTCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTT +
Preference number: 4 (lower is better)
Translates to: SILSAYGEQLVATLSVPTSSPQG*SVGTVF
Trigger: AAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGA...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACTCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTT +
Preference number: 4 (lower is better)
Translates to: SGWRMVWLTHAECLPERDSSPQG*SVGTVF
Trigger: AAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGA...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGTCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTT +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRSSPQG*SVGTVF
Trigger: AAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGA...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGTTGGGGGTTCATGGATCTTAGAATTCCAACTTGCCCTGCTCCTCCAGTGTGTGGTGAAGGAAAGGTCTaGCGGTGTGGGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SWGFMDLRIPTCPAPPVCGEGKV*RCGAGH
Trigger: GTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACC...ACACACTGGAGGAGCAGGGCAAGTTGGAATTCTAAGATCCATGAACCCCCAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAAGGAACAGGTTGGGGTaGTGGGCGCCGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIARNRLG*WAPMGG
Trigger: GCCTCCCATCGGCGCCCACCACCCCAACCTGTTCCT...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAAGCGCGAGGAACAGGTTaGGGTGGTGGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQARGTG*GGGRRW
Trigger: CCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGC...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTGGGGCGCAGCGCAGTaGCGCGCGAGGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLWGAAQ*RARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCA...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: SILSAYGEQLVATLSVPTGENPC*AAGPGA
Trigger: CGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCC...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACACTGTCCCCAAGACTaGCGAGCCCAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAHCPQD*RAQPQQ
Trigger: CTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCTGCAGCTTTTCCCCCTaGGGCTTTGGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTCSFSP*GFGCRH
Trigger: GTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCA...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCAGGGAACAGCGGAATCTCAGACACATaGAGAACTACACCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLCPSVLLRSTPCAPGNSGISDT*RTTPCL
Trigger: GAGACAAGGTGTAGTTCTCCATGTGTCTGAGATTCC...GCTGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR TCA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTTGGGAGGCGCCCCTCTaGGAGTCTCGAGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSWEAPL*ESRGTP
Trigger: GGGGGTTCCTCGAGACTCTCAGAGGGGCGCCTCCCA...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACGTGGTAGAGGTGTTCTaGGCTCTGTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHVVEVF*ALLAGV
Trigger: CACCCCTGCCAACAGAGCTCAGAACACCTCTACCAC...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCCACCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFHLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTG...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGGGTCCCCTGAATGCATaGGGCGGCCGAGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLGPLNA*GGREVA
Trigger: TGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACC...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCCAGGCACAGGTCCCCTaGATGCATGAGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLQAQVP*MHEAAE
Trigger: CTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTG...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGCCGTCACCTTGTGCCTaGATGACAGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKPSPCA*MTGTGP
Trigger: GGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGG...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGCAGCCCCTCGCAAGGTaGTCTGTGTTTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLQPLAR*SVFASS
Trigger: GCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTG...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGCAGCCCCTCGCAAGGTaGTCTGTGTTTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGQPLAR*SVFASS
Trigger: GCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTG...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGGTTGGCACACAGCTTTaGGCTGGCACCTTATCCTGG +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRVGTQL*AGTLSW
Trigger: CCAGGATAAGGTGCCAGCTCAAAGCTGTGTGCCAAC...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453617.6
CDS-3UTR GCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGATCGATGACACTATTTaGCTGGGCCACCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRIDDTI*LGHLPS
Trigger: CGACGGGAGGTGGCCCAGGCAAATAGTGTCATCGAT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCTGCCGTAAGTGTTCATaGACCTGTGCTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPCRKCS*TCAYRA
Trigger: GGCCCTGTAAGCACAGGTGCATGAACACTTACGGCA...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATAAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFISPVTL*LNDRHR
Trigger: CCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCT...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISSPVTL*LNDRHR
Trigger: CCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCT...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATACAAACACCTGGAGTGTaGCAGAGTGCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIQTPGV*QSAAPS
Trigger: TGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTG...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGCAAACACCTGGAGTGTaGCAGAGTGCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRQTPGV*QSAAPS
Trigger: TGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTG...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCAAGGAACAGGTTGGGGTaGTGGGCGCCGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPRNRLG*WAPMGG
Trigger: GCCTCCCATCGGCGCCCACCACCCCAACCTGTTCCT...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTAGGAACAGGTTGGGGTaGTGGGCGCCGATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFIRNRLG*WAPMGG
Trigger: GCCTCCCATCGGCGCCCACCACCCCAACCTGTTCCT...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCATGACACTATTTGCCTaGGCCACCTCCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPMTLFA*ATSRRT
Trigger: AGTTCGACGGGAGGTGGCCCAGGCAAATAGTGTCAT...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTCACTGTCCCCAAGACTaGCGAGCCCAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCHCPQD*RAQPQQ
Trigger: CTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTG...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAACACTGTCCCCAAGACTaGCGAGCCCAGCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKHCPQD*RAQPQQ
Trigger: CTGCTGGGGCTGGGCTCGCCAGTCTTGGGGACAGTG...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGCTGCAGGCCAGGGGATaGGCACTGGCACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGLQARG*ALAPYL
Trigger: CAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAG...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGTGTTCTGAGCTCTGTTaGCAGGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLCSELC*QGWWWW
Trigger: CCACCACCACCACCCCTGCCAACAGAGCTCAGAACA...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGTTCCCCCTGGGGCTTTaGCTGCCGACACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRFPLGL*LPTLSD
Trigger: ATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAA...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCTTCCCCCTGGGGCTTTaGCTGCCGACACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFFPLGL*LPTLSD
Trigger: ATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAA...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCTGCAGCTTTTCCCCCTaGGGCTTTGGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCCSFSP*GFGCRH
Trigger: GTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCA...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHHRAAP*APCFLT
Trigger: TGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCAGGGAACAGCCATTGCTACAATTGTCTGCTaGGTCCCTGATTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: CAQVCCSAQLHVHQGTAIATIVC*VPDWFP
Trigger: TGGGAACCAATCAGGGACCCAGCAGACAATTGTAGC...AATGGCTGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR TCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCGGTTGGCACACAGGCTaGCACTGTCCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTGWHTG*HCPQDW
Trigger: CCAGTCTTGGGGACAGTGTCAGCCTGTGTGCCAACC...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTGGTTGGCACACAGGCTaGCACTGTCCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGGWHTG*HCPQDW
Trigger: CCAGTCTTGGGGACAGTGTCAGCCTGTGTGCCAACC...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCGCAGGTCAGGGCACTTaGGCAGGAACCATCCGGCAT +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGAGQGT*AGTIRH
Trigger: ATGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGC...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCGCAGGTCAGGGCACTTaGGCAGGAACCATCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTAGQGT*AGTIRH
Trigger: ATGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGC...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGGTGGTAGAGGTGTTCTaGGCTCTGTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGVVEVF*ALLAGV
Trigger: CACCCCTGCCAACAGAGCTCAGAACACCTCTACCAC...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCCCGTCACCTTGTGCCTaGATGACAGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTPSPCA*MTGTGP
Trigger: GGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGG...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCCAGCCCCTCGCAAGGTaGTCTGTGTTTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTQPLAR*SVFASS
Trigger: GCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTG...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTATCATACTGATGAGGTaGAGGAAAGGTCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTIILMR*RKGLPV
Trigger: CACCGGCAGACCTTTCCTTCACCTCATCAGTATGAT...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR TCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCATCATACTGATGAGGTaGAGGAAAGGTCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPIILMR*RKGLPV
Trigger: CACCGGCAGACCTTTCCTTCACCTCATCAGTATGAT...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp ACTCCATGTGCACCAGGGAACAGCCATTCTCTGCAGGCTGATTTGATCTGGAACTGTCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: TPCAPGNSHSLQADLIWNCLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGACA...GTTCCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCACATGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATCGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDRRPGY*CRSRRT
Trigger: TGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCG...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATAATCGATGACACTATTTaGCTGGGCCACCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIIDDTI*LGHLPS
Trigger: CGACGGGAGGTGGCCCAGGCAAATAGTGTCATCGAT...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCATCGATGACACTATTTaGCTGGGCCACCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACIDDTI*LGHLPS
Trigger: CGACGGGAGGTGGCCCAGGCAAATAGTGTCATCGAT...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACGCCATACTGACAGTTTaGCATGGAGCAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGWRMVWLTHAECLPERDAILTV*HGAGQG
Trigger: GCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGC...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCGCCATACTGACAGTTTaGCATGGAGCAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTAILTV*HGAGQG
Trigger: GCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGC...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGCCCTGGGGCTTTGGCTaGCGACACTGTCAGATATTG +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLPWGFG*RHCQIL
Trigger: CAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGG...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGCCCTGGGGCTTTGGCTaGCGACACTGTCAGATATTG +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRPWGFG*RHCQIL
Trigger: CAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGG...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGSPVTL*LNDRHR
Trigger: CCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCGGTGAAGGAAAGGTCTaGCGGTGTGGGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLGEGKV*RCGAGH
Trigger: GTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACC...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp AGTCAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCAATTGCGCGAGGAACAGGTTaGGGTGGTGGGCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: SQSSGQARTNLSEEGKSIARGTG*GGGRRW
Trigger: CCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGC...AATTGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379987.7
ENST00000514622.5
CDS-3UTR CCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLGENPC*AAGPGA
Trigger: CGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCC...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGGENPC*AAGPGA
Trigger: CGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCC...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCTGCAGGCCAGGGGATaGGCACTGGCACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVLQARG*ALAPYL
Trigger: CAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAG...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACTGCAGGCCAGGGGATaGGCACTGGCACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIALQARG*ALAPYL
Trigger: CAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTGTTCTGAGCTCTGTTaGCAGGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVATLSVPTLHILENHQWCSELC*QGWWWW
Trigger: CCACCACCACCACCCCTGCCAACAGAGCTCAGAACA...CCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGTTCCCCCTGGGGCTTTaGCTGCCGACACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKFPLGL*LPTLSD
Trigger: ATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAA...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGTGCAGCTTTTCCCCCTaGGGCTTTGGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGCSFSP*GFGCRH
Trigger: GTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCA...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTVCLQP*PPFLPH
Trigger: GTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAAC...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTCTTTGTGATTCCTGCTaGGTCCCTGATTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTLCDSC*VPDWFP
Trigger: TGGGAACCAATCAGGGACCCAGCAGGAATCACAAAG...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504787.1
3UTR CAA 72 bp GAGACACAGGATGGAAGGCAACACCCACAGATGGCTTaGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETQDGRQHPQMA*MCLRCPCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GGTTTGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCCTTTAATGGTTGGCACACAGGCTaGCACTGTCCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GLPLSLLFSRLNNPSSFNGWHTG*HCPQDW
Trigger: CCAGTCTTGGGGACAGTGTCAGCCTGTGTGCCAACC...ATTAAAGGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAGCAGGTCAGGGCACTTaGGCAGGAACCATCCGGCAT +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKAGQGT*AGTIRH
Trigger: ATGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGC...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: LVATLSVPTLHILENHQWSPLGF*GSVCTL
Trigger: CAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGA...CCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGCACCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLHLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTG...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACACCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAHLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCACACCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHAHLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTG...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCCGTCACCTTGTGCCTaGATGACAGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQPSPCA*MTGTGP
Trigger: GGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTCCGTCACCTTGTGCCTaGATGACAGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPPSPCA*MTGTGP
Trigger: GGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGG...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GACGGCCAACCCCTGTGCCCAAGTGTGCTGCTCCGCTCAACTCCATGTGCACCAAAGCATTGTAGAGACTaGGGTTCAAAGGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: DGQPLCPSVLLRSTPCAPKHCRD*GSKVIF
Trigger: GAAAATAACCTTTGAACCTCAGTCTCTACAATGCTT...TGGTGCACATGGAGTTGAGCGGAGCAGCACACTTGGGCACAGGGGTTGGCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCATCGATGACACTATTTaGCTGGGCCACCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCIDDTI*LGHLPS
Trigger: CGACGGGAGGTGGCCCAGGCAAATAGTGTCATCGAT...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCAACCAGGATGACACTTaGACTTGTTTGGCCCGATAC +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPNQDDT*TCLARY
Trigger: GTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTT...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCAGTGTTCATGCACCTGTaGTTACAGGGCCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHAVFMHL*LQGRGF
Trigger: GAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACAC...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCGTGTTCATGCACCTGTaGTTACAGGGCCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGVFMHL*LQGRGF
Trigger: GAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACAC...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATGCCGTAAGTGTTCATaGACCTGTGCTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFICRKCS*TCAYRA
Trigger: GGCCCTGTAAGCACAGGTGCATGAACACTTACGGCA...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGTGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRCTGSW*YSCQSG
Trigger: ACCGGACTGACAACTATAGCACCAGCTGCCAGTACA...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGCCCTGGGGCTTTGGCTaGCGACACTGTCAGATATTG +
Preference number: 4 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLPWGFG*RHCQIL
Trigger: CAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGG...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCACAGGTCCCCTGAATaGATGAGGCGGCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQHRSPE*MRRPRG
Trigger: ACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTSPVTL*LNDRHR
Trigger: CCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCT...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGSPVTL*LNDRHR
Trigger: CCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCT...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGSPVTL*LNDRHR
Trigger: CCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCT...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGTTTGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCCTTTAATTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: GLPLSLLFSRLNNPSSFNWSVPE*SPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCA...ATTAAAGGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CGTTACCACAACCCAACACTTCTGCCAATTTCCTACTGCTGCCAATATAAGGTCTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RYHNPTLLPISYCCQYKVWSVPE*SPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCA...GACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTGGTAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFIWSVPE*SPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCA...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPWSVPE*SPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCA...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGCAAACACCTGGAGTGTaGCAGAGTGCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGQTPGV*QSAAPS
Trigger: TGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTG...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAAACACCTGGAGTGTaGCAGAGTGCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLQTPGV*QSAAPS
Trigger: TGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTG...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGTGATCTGTGTTTaGCTCCAGCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFKVICV*LQPWPP
Trigger: TGGTGGCCATGGCTGGAGGCAAACACAGATCACCTT...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAGGTGATCTGTGTTTaGCTCCAGCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLKVICV*LQPWPP
Trigger: TGGTGGCCATGGCTGGAGGCAAACACAGATCACCTT...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAAGGTGATCTGTGTTTaGCTCCAGCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISKVICV*LQPWPP
Trigger: TGGTGGCCATGGCTGGAGGCAAACACAGATCACCTT...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AAGTGTGCTGCTCCGCTCAACTCCATGTGCACCAGGGAACAGCCATTCTCTGCACACCTTGTCTCCAGTTaGTACAAGTCAAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: KCAAPLNSMCTREQPFSAHLVSS*YKSSPP
Trigger: AGGTGGACTTGACTTGTAGCAACTGGAGACAAGGTG...TGCAGAGAATGGCTGTTCCCTGGTGCACATGGAGTTGAGCGGAGCAGCACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CCA 90 bp AAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCTGGGGCGCAGCGCAGTaGCGCGCGAGGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: KSILLMVQHRTHNIIAICWGAAQ*RARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCA...GCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTTTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGLGSGS*GAAQWR
Trigger: GCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAA...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCATTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGALGSGS*GAAQWR
Trigger: GCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAA...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQGENPC*AAGPGA
Trigger: CGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCC...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATACCAGGGGATGGGCACTaGCACCGTATTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIPGDGH*HRICPL
Trigger: TAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGG...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCCCAGGGGATGGGCACTaGCACCGTATTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFPGDGH*HRICPL
Trigger: TAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGG...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCCCAGGGGATGGGCACTaGCACCGTATTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACPGDGH*HRICPL
Trigger: TAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGG...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTCTGCAGGCCAGGGGATaGGCACTGGCACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFILQARG*ALAPYL
Trigger: CAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAG...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPDRRNI*CLRRPP
Trigger: TGGTGGCCTCCGAAGACACCATATATTCCTCCTATC...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRRCTGS*CYSCQS
Trigger: GGACTGACAACTATAGCACCAGCTGCCAGTACACCT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACNCNPS*RCTGSW
Trigger: CCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTT...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGTTCCCCCTGGGGCTTTaGCTGCCGACACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGFPLGL*LPTLSD
Trigger: ATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAA...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCTTCCCCCTGGGGCTTTaGCTGCCGACACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGFPLGL*LPTLSD
Trigger: ATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAA...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTTGCAGCTTTTCCCCCTaGGGCTTTGGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFICSFSP*GFGCRH
Trigger: GTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCA...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVHRAAP*APCFLT
Trigger: TGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTG...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAHRAAP*APCFLT
Trigger: TGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LVATLSVPTLHILENHQWVCLQP*PPFLPH
Trigger: GTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAAC...CCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGAAAGGTCTGCCGGTGTaGGGCAGGGCACTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVKGLPV*GRALFL
Trigger: GAGAAAGAGTGCCCTGCCCCACACCGGCAGACCTTT...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACGGATGGAGGATGGTATaGCTCACGCATGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHGWRMV*LTHAEC
Trigger: GCATTCAGCATGCGTGAGCCATACCATCCTCCATCC...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGGGATGGAGGATGGTATaGCTCACGCATGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRGWRMV*LTHAEC
Trigger: GCATTCAGCATGCGTGAGCCATACCATCCTCCATCC...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGAATCAGGATGGAGGATaGTATGGCTCACGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRNQDGG*YGSRML
Trigger: CAGCATGCGTGAGCCATACCATCCTCCATCCTGATT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGGCTGTTCACTGCCTTaGTCAAGAGGAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKGCSLP*SRGAGM
Trigger: CATCCCAGCTCCTCTTGACCAAGGCAGTGAACAGCC...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS-3UTR TCA 90 bp CACAACCCAACACTTCTGCCAATTTCCTACTGCTGCCAATATAAGGTCATGGAAGCAGGTCAGGGCACTTaGGCAGGAACCATCCGGCAT +
Preference number: 4 (lower is better)
Translates to: HNPTLLPISYCCQYKVMEAGQGT*AGTIRH
Trigger: ATGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGC...TTCCATGACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACACATCACAGCCATACTaGCAGTTTGCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHTSQPY*QFAMEQ
Trigger: CTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGT...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTGTGGTAGAGGTGTTCTaGGCTCTGTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCVVEVF*ALLAGV
Trigger: CACCCCTGCCAACAGAGCTCAGAACACCTCTACCAC...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGTGGTAGAGGTGTTCTaGGCTCTGTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPVVEVF*ALLAGV
Trigger: CACCCCTGCCAACAGAGCTCAGAACACCTCTACCAC...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGTCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGSPLGF*GSVCTL
Trigger: CAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGA...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTCATTGTCTTTCTCCCTaGTCCATCCACAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTHCLSP*SIHKVH
Trigger: ATGGACTTTGTGGATGGATCAGGGAGAAAGACAATG...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp GGTTTGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCCTTTAATCACCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GLPLSLLFSRLNNPSSFNHLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTG...ATTAAAGGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp CTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGTGATTCGCTCTTaGTGTCAGCCCCTCGCAAGG +
Preference number: 4 (lower is better)
Translates to: LVATLSVPTLHILENHQWFVIRS*CQPLAR
Trigger: CCTTGCGAGGGGCTGACATCAAGAGCGAATCACAAA...CCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305572.12
CDS-3UTR TCA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCAAGGTTGCCGTGGAATaGACACATCTCCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACKVAVE*THLLWV
Trigger: AACCCAGAGGAGATGTGTTCATTCCACGGCAACCTT...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR TCA 90 bp CTGGAACCACAATTGAGTCTAGTTCTGGAATCTCAGACACATGGAGAACTACACAGTTACAGCAGCCTCTaGGGTGGTGGAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LEPQLSLVLESQTHGELHSYSSL*GGGGWQ
Trigger: CTGCCACCCTCCACCACCTCAGAGGCTGCTGTAACT...GTGTAGTTCTCCATGTGTCTGAGATTCCAGAACTAGACTCAATTGTGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAATCGATGACACTATTTaGCTGGGCCACCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAIDDTI*LGHLPS
Trigger: CGACGGGAGGTGGCCCAGGCAAATAGTGTCATCGAT...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCTACATTCACCATGTTTaGATCGTGGTTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPYIHHV*IVVGTQ
Trigger: CTGTGTGCCAACCACGATGCAAACATGGTGAATGTA...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGAACCAGGATGACACTTaGACTTGTTTGGCCCGATAC +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRNQDDT*TCLARY
Trigger: GTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTGTGTTCATGCACCTGTaGTTACAGGGCCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCVFMHL*LQGRGF
Trigger: GAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACAC...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAGTGTTCATGCACCTGTaGTTACAGGGCCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKVFMHL*LQGRGF
Trigger: GAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACAC...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGGCCATACTGACAGTTTaGCATGGAGCAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVAILTV*HGAGQG
Trigger: GCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGC...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCGCCATACTGACAGTTTaGCATGGAGCAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTAILTV*HGAGQG
Trigger: GCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGC...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATACAGATATTGTCCACCTaGTGGGTCCCTGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIQILST*WVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGGTGGACAATATCTG...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCAGATATTGTCCACCTaGTGGGTCCCTGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHQILST*WVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGGTGGACAATATCTG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCCCTGGGGCTTTGGCTaGCGACACTGTCAGATATTG +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGPWGFG*RHCQIL
Trigger: CAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGG...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGWSVPE*SPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCA...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGAAGGTGATCTGTGTTTaGCTCCAGCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGKVICV*LQPWPP
Trigger: TGGTGGCCATGGCTGGAGGCAAACACAGATCACCTT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTTCTAACAATGGCCCCTaGCAAGAAATGCTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTSNNGP*QEMLPY
Trigger: ATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGA...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGATGACACTATTTGCCTaGGCCACCTCCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLMTLFA*ATSRRT
Trigger: AGTTCGACGGGAGGTGGCCCAGGCAAATAGTGTCAT...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGATGACACTATTTGCCTaGGCCACCTCCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKMTLFA*ATSRRT
Trigger: AGTTCGACGGGAGGTGGCCCAGGCAAATAGTGTCAT...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGTGTTCTGAGCTCTGTTaGCAGGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQCSELC*QGWWWW
Trigger: CCACCACCACCACCCCTGCCAACAGAGCTCAGAACA...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGTGTCAGTCCGGTGGTTaGCCTTTCTGGGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVCQSGG*PFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACA...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCATGTCAGTCCGGTGGTTaGCCTTTCTGGGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIACQSGG*PFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACA...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGTGTCAGTCCGGTGGTTaGCCTTTCTGGGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGCQSGG*PFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACA...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SILSAYGEQLVATLSVPTRCTGS*CYSCQS
Trigger: GGACTGACAACTATAGCACCAGCTGCCAGTACACCT...GGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTTGCAGCTTTTCCCCCTaGGGCTTTGGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSCSFSP*GFGCRH
Trigger: GTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCA...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTCACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCHRAAP*APCFLT
Trigger: TGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTG...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLVCLQP*PPFLPH
Trigger: GTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAAC...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GGTTTGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCCTTTAATAAAGGTCTGCCGGTGTaGGGCAGGGCACTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLPLSLLFSRLNNPSSFNKGLPV*GRALFL
Trigger: GAGAAAGAGTGCCCTGCCCCACACCGGCAGACCTTT...ATTAAAGGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAATCAGGATGGAGGATaGTATGGCTCACGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLNQDGG*YGSRML
Trigger: CAGCATGCGTGAGCCATACCATCCTCCATCCTGATT...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp AGTCAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCAATTGGTTGGCACACAGGCTaGCACTGTCCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: SQSSGQARTNLSEEGKSIGWHTG*HCPQDW
Trigger: CCAGTCTTGGGGACAGTGTCAGCCTGTGTGCCAACC...AATTGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379987.7
ENST00000514622.5
CDS-3UTR TCA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGACATCACAGCCATACTaGCAGTTTGCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLTSQPY*QFAMEQ
Trigger: CTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGT...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGGTCCCCTGAATGCATaGGGCGGCCGAGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFGPLNA*GGREVA
Trigger: TGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAGGTCCCCTGAATGCATaGGGCGGCCGAGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VHHISREVNTTHGTTPNTGPLNA*GGREVA
Trigger: TGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACC...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATCAGGCACAGGTCCCCTaGATGCATGAGGCGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDQAQVP*MHEAAE
Trigger: CTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTG...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCCAGCCCCTCGCAAGGTaGTCTGTGTTTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFQPLAR*SVFASS
Trigger: GCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTG...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAATTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TCAACTCCATGTGCACCAGGGAACAGCCATTCTCTGCAGGCTGATTTGATCTGGCCATTCTCTGCAGGCTaGTTTGATCTGGAACCACAA +
Preference number: 4 (lower is better)
Translates to: STPCAPGNSHSLQADLIWPFSAG*FDLEPQ
Trigger: TTGTGGTTCCAGATCAAATCAGCCTGCAGAGAATGG...CCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCACATGGAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR GCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTGCCGTAAGTGTTCATaGACCTGTGCTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLCRKCS*TCAYRA
Trigger: GGCCCTGTAAGCACAGGTGCATGAACACTTACGGCA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAGTAGCACTTGTAGCTaGCGTAAGTGTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFSSTCS*RKCSCT
Trigger: GGTGCATGAACACTTACGGCAGCTACAAGTGCTACT...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCAGTAGCACTTGTAGCTaGCGTAAGTGTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTSSTCS*RKCSCT
Trigger: GGTGCATGAACACTTACGGCAGCTACAAGTGCTACT...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGTTTGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCCTTTAATGCCATACTGACAGTTTaGCATGGAGCAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLPLSLLFSRLNNPSSFNAILTV*HGAGQG
Trigger: GCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGC...ATTAAAGGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTCCCTGGGGCTTTGGCTaGCGACACTGTCAGATATTG +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCPWGFG*RHCQIL
Trigger: CAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGG...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAACCCTGGGGCTTTGGCTaGCGACACTGTCAGATATTG +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQPWGFG*RHCQIL
Trigger: CAATATCTGACAGTGTCGGCAGCCAAAGCCCCAGGG...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGCACAGGTCCCCTGAATaGATGAGGCGGCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: YILPLLKGLMIYFPPPALHRSPE*MRRPRG
Trigger: ACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTG...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGACAAACACCTGGAGTGTaGCAGAGTGCAGCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGQTPGV*QSAAPS
Trigger: TGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTG...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAAAGGTGATCTGTGTTTaGCTCCAGCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAKVICV*LQPWPP
Trigger: TGGTGGCCATGGCTGGAGGCAAACACAGATCACCTT...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAACCTGGATCATCCTTTaGTTCATCGTCTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISTWIIL*FIVCTD
Trigger: GTCAGTGCAGACGATGAAGCAAAGGATGATCCAGGT...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCCTCACGCATGCTGAATaGCTTCCTGAAAGAGACACA +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFLTHAE*LPERDT
Trigger: TGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAG...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGAAAGAGGCTGTTCACTaGCTTGGTCAAGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKKEAVH*LGQEEL
Trigger: CAGCTCCTCTTGACCAAGGCAGTGAACAGCCTCTTT...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS-3UTR GCA 90 bp CCATGTGCACCAGGGAACAGCCATTCTCTGCAGGCTGATTTGATCTGGAACCACCAAGTCAAGTCCACCTaGATGCAGACAGCTACAATT +
Preference number: 4 (lower is better)
Translates to: PCAPGNSHSLQADLIWNHQVKST*MQTATI
Trigger: AATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTG...GTGGTTCCAGATCAAATCAGCCTGCAGAGAATGGCTGTTCCCTGGTGCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCATGGGGCGCAGCGCAGTaGCGCGCGAGGAACAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGAWGAAQ*RARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCA...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCCCAGGGGATGGGCACTaGCACCGTATTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTPGDGH*HRICPL
Trigger: TAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGG...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATAGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIDRRNI*CLRRPP
Trigger: TGGTGGCCTCCGAAGACACCATATATTCCTCCTATC...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRDRRNI*CLRRPP
Trigger: TGGTGGCCTCCGAAGACACCATATATTCCTCCTATC...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTTGTCAGTCCGGTGGTTaGCCTTTCTGGGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPCQSGG*PFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACA...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGNCNPS*RCTGSW
Trigger: CCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTT...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGNCNPS*RCTGSW
Trigger: CCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTT...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGTGCAGCTTTTCCCCCTaGGGCTTTGGCTGCCGACAC +
Preference number: 4 (lower is better)
Translates to: YILPLLKGLMIYFPPPALCSFSP*GFGCRH
Trigger: GTGTCGGCAGCCAAAGCCCCAGGGGGAAAAGCTGCA...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGACACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGHRAAP*APCFLT
Trigger: TGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTG...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGGAAAGAGACACAGGATaGAAGGCAACACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRERDTG*KATPTD
Trigger: ATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTC...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGTTGGTCAAGAGGAGCTaGGATGTGCTCGTCTTGATT +
Preference number: 4 (lower is better)
Translates to: RQHPQMALMCLRCPCISRLVKRS*DVLVLI
Trigger: AATCAAGACGAGCACATCCCAGCTCCTCTTGACCAA...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
3UTR CAA 72 bp TGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTaGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: WSPPSLCQPFIY*KTINGLPLSLL
Trigger: GAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGGTTGGCACACAGGCTaGCACTGTCCCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFGWHTG*HCPQDW
Trigger: CCAGTCTTGGGGACAGTGTCAGCCTGTGTGCCAACC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCACATCACAGCCATACTaGCAGTTTGCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGTSQPY*QFAMEQ
Trigger: CTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGT...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACATCACAGCCATACTaGCAGTTTGCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLTSQPY*QFAMEQ
Trigger: CTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGT...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAACATCACAGCCATACTaGCAGTTTGCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIATSQPY*QFAMEQ
Trigger: CTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGT...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCCTGATACTGACCAAGTaGGCATTCGTCTATGTCATG +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFLILTK*AFVYVM
Trigger: CATGACATAGACGAATGCTCACTTGGTCAGTATCAG...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCTGATACTGACCAAGTaGGCATTCGTCTATGTCATG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHLILTK*AFVYVM
Trigger: CATGACATAGACGAATGCTCACTTGGTCAGTATCAG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGATCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGSPLGF*GSVCTL
Trigger: CAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGA...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTTCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGSPLGF*GSVCTL
Trigger: CAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGA...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCCATTGTCTTTCTCCCTaGTCCATCCACAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFHCLSP*SIHKVH
Trigger: ATGGACTTTGTGGATGGATCAGGGAGAAAGACAATG...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCACATTGTCTTTCTCCCTaGTCCATCCACAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISHCLSP*SIHKVH
Trigger: ATGGACTTTGTGGATGGATCAGGGAGAAAGACAATG...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCAGGTCCCCTGAATGCATaGGGCGGCCGAGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPGPLNA*GGREVA
Trigger: TGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACC...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGAAGGTTGCCGTGGAATaGACACATCTCCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGKVAVE*THLLWV
Trigger: AACCCAGAGGAGATGTGTTCATTCCACGGCAACCTT...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTACATTCACCATGTTTaGATCGTGGTTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHYIHHV*IVVGTQ
Trigger: CTGTGTGCCAACCACGATGCAAACATGGTGAATGTA...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGAACCAGGATGACACTTaGACTTGTTTGGCCCGATAC +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGNQDDT*TCLARY
Trigger: GTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTTGCCGTAAGTGTTCATaGACCTGTGCTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPCRKCS*TCAYRA
Trigger: GGCCCTGTAAGCACAGGTGCATGAACACTTACGGCA...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGAGTAGCACTTGTAGCTaGCGTAAGTGTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKSSTCS*RKCSCT
Trigger: GGTGCATGAACACTTACGGCAGCTACAAGTGCTACT...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGIEQSC*TDTDQV
Trigger: CACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGAT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAACATCGAGCAAAGCTaGTGCACTGATACTGACCAA +
Preference number: 4 (lower is better)
Translates to: GRQHPQMALMCLRCPCISNIEQS*CTDTDQ
Trigger: TTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTT...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHACTGSW*YSCQSG
Trigger: ACCGGACTGACAACTATAGCACCAGCTGCCAGTACA...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCATGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIACTGSW*YSCQSG
Trigger: ACCGGACTGACAACTATAGCACCAGCTGCCAGTACA...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLCTGSW*YSCQSG
Trigger: ACCGGACTGACAACTATAGCACCAGCTGCCAGTACA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAGATATTGTCCACCTaGTGGGTCCCTGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAQILST*WVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGGTGGACAATATCTG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCCCTGCCAAGAAATGCTCCCTTATACTCTAGTCTAAGCCAGTTTCCTCTTGTTAAGGTGATCTGTGTTTaGCTCCAGCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PLPRNAPLYSSLSQFPLVKVICV*LQPWPP
Trigger: TGGTGGCCATGGCTGGAGGCAAACACAGATCACCTT...AACAAGAGGAAACTGGCTTAGACTAGAGTATAAGGGAGCATTTCTTGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCAGGTGAAGGAAAGGTCTaGCGGTGTGGGGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPGEGKV*RCGAGH
Trigger: GTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACC...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR GCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCCTCACGCATGCTGAATaGCTTCCTGAAAGAGACACA +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCLTHAE*LPERDT
Trigger: TGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAG...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGCTCACGCATGCTGAATaGCTTCCTGAAAGAGACACA +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKLTHAE*LPERDT
Trigger: TGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAG...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAAAAGAGGCTGTTCACTaGCTTGGTCAAGAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAKEAVH*LGQEEL
Trigger: CAGCTCCTCTTGACCAAGGCAGTGAACAGCCTCTTT...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFGENPC*AAGPGA
Trigger: CGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAATGACACTATTTGCCTaGGCCACCTCCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKMTLFA*ATSRRT
Trigger: AGTTCGACGGGAGGTGGCCCAGGCAAATAGTGTCAT...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACACACTTGCACTTGTTTaGCCCGATACATTCACCATG +
Preference number: 4 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHTLALV*PDTFTM
Trigger: CATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGT...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCCAGGGGATGGGCACTaGCACCGTATTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQPGDGH*HRICPL
Trigger: TAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGDRRNI*CLRRPP
Trigger: TGGTGGCCTCCGAAGACACCATATATTCCTCCTATC...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTRCTGS*CYSCQS
Trigger: GGACTGACAACTATAGCACCAGCTGCCAGTACACCT...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLRCTGS*CYSCQS
Trigger: GGACTGACAACTATAGCACCAGCTGCCAGTACACCT...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCNCNPS*RCTGSW
Trigger: CCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTT...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGAAAGGTCTGCCGGTGTaGGGCAGGGCACTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: YILPLLKGLMIYFPPPALKGLPV*GRALFL
Trigger: GAGAAAGAGTGCCCTGCCCCACACCGGCAGACCTTT...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTAATATTACTGTTCTGTaGAACCTGGGAGAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTNITVL*NLGESN
Trigger: ATTGGACTCTCCCAGGTTCCACAGAACAGTAATATT...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTAATCAGGATGGAGGATaGTATGGCTCACGCATGCTG +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGNQDGG*YGSRML
Trigger: CAGCATGCGTGAGCCATACCATCCTCCATCCTGATT...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGCTGGCACCTTATCCTaGCTATTCTCTGCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKAGTLS*LFSALR
Trigger: TCTTAAGGCAGAGAATAGCCAGGATAAGGTGCCAGC...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453617.6
CDS-3UTR CCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTGTTTGCATCGTGGTTaGCACACAGCTTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLCLHRG*HTALSW
Trigger: CCAGCTCAAAGCTGTGTGCCAACCACGATGCAAACA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453617.6
CDS-3UTR CCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACCATGTTTGCATCGTaGTTGGCACACAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCTMFAS*LAHSFE
Trigger: CTCAAAGCTGTGTGCCAACCACGATGCAAACATGGT...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453617.6
CDS-3UTR TCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCTGCCTCCAATATACATaGGATCGAAGCCTTTATGAC +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTCLQYT*DRSLYD
Trigger: GTCATAAAGGCTTCGATCTCATGTATATTGGAGGCA...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCCTGATACTGACCAAGTaGGCATTCGTCTATGTCATG +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCLILTK*AFVYVM
Trigger: CATGACATAGACGAATGCTCACTTGGTCAGTATCAG...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCTTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFFPFGT*IGPEGS
Trigger: TGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAA...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGTGGTAGAGGTGTTCTaGGCTCTGTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFVVEVF*ALLAGV
Trigger: CACCCCTGCCAACAGAGCTCAGAACACCTCTACCAC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCTCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: QGKSILLMVQHRTHNIIASPLGF*GSVCTL
Trigger: CAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGA...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGCATTGTCTTTCTCCCTaGTCCATCCACAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGHCLSP*SIHKVH
Trigger: ATGGACTTTGTGGATGGATCAGGGAGAAAGACAATG...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCACCGTCACCTTGTGCCTaGATGACAGGCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPPSPCA*MTGTGP
Trigger: GGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGG...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACCAGCCCCTCGCAAGGTaGTCTGTGTTTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IISQGKSILLMVQHRTHNQPLAR*SVFASS
Trigger: GCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTG...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp TCACTCCGTTACCACAACCCAACACTTCTGCCAATTTCCTACTGCTGCCAATATAAGGTTGCCGTGGAATaGACACATCTCCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLRYHNPTLLPISYCCQYKVAVE*THLLWV
Trigger: AACCCAGAGGAGATGTGTTCATTCCACGGCAACCTT...ATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTGGTAACGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGTTCAAACAAGTCATTTaGAGGTTGCCGTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRFKQVI*RLPWNE
Trigger: TTCATTCCACGGCAACCTTCAAATGACTTGTTTGAA...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTACATTCACCATGTTTaGATCGTGGTTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLYIHHV*IVVGTQ
Trigger: CTGTGTGCCAACCACGATGCAAACATGGTGAATGTA...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGAGTAGCACTTGTAGCTaGCGTAAGTGTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLSSTCS*RKCSCT
Trigger: GGTGCATGAACACTTACGGCAGCTACAAGTGCTACT...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVIEQSC*TDTDQV
Trigger: CACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGAT...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTIEQSC*TDTDQV
Trigger: CACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGAT...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CCCCTGCCAAGAAATGCTCCCTTATACTCTAGTCTAAGCCAGTTTCCTCTTGTTTGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PLPRNAPLYSSLSQFPLVCTGSW*YSCQSG
Trigger: ACCGGACTGACAACTATAGCACCAGCTGCCAGTACA...AACAAGAGGAAACTGGCTTAGACTAGAGTATAAGGGAGCATTTCTTGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAACAGATATTGTCCACCTaGTGGGTCCCTGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKQILST*WVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGGTGGACAATATCTG...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATCACAGGTCCCCTGAATaGATGAGGCGGCCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDHRSPE*MRRPRG
Trigger: ACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTG...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTATCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTT +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLSSPQG*SVGTVF
Trigger: AAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGA...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATATCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTT +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHISSPQG*SVGTVF
Trigger: AAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGA...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGAAGTCATTTGAAGGTTaGCGTGGAATGAACACATCT +
Preference number: 4 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRKSFEG*RGMNTS
Trigger: AGATGTGTTCATTCCACGGCAACCTTCAAATGACTT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCTGGATCATCCTTTaGTTCATCGTCTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLTWIIL*FIVCTD
Trigger: GTCAGTGCAGACGATGAAGCAAAGGATGATCCAGGT...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLLMCLR*PCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGTTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGLMCLR*PCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAA...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCTCACGCATGCTGAATaGCTTCCTGAAAGAGACACA +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGLTHAE*LPERDT
Trigger: TGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAG...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTAGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLGENPC*AAGPGA
Trigger: CGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCC...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAATGACACTATTTGCCTaGGCCACCTCCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGMTLFA*ATSRRT
Trigger: AGTTCGACGGGAGGTGGCCCAGGCAAATAGTGTCAT...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTACCATGTTTGCATCGTaGTTGGCACACAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPTMFAS*LAHRLT
Trigger: TGTCAGCCTGTGTGCCAACCACGATGCAAACATGGT...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GTTCCAACACATCCCATGCCTCTAAGCATGGGACTTGCTTCCTATCCCATCCTGGTCAGTCCATCACCCTaGTATCCTTCTTTACATTTG +
Preference number: 4 (lower is better)
Translates to: VPTHPMPLSMGLASYPILVSPSP*YPSLHL
Trigger: CAAATGTAAAGAAGGATACCAGGGTGATGGACTGAC...CAGGATGGGATAGGAAGCAAGTCCCATGCTTAGAGGCATGGGATGTGTTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGGTCAGTCCATCACCCTaGTATCCTTCTTTACATTTG +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLVSPSP*YPSLHL
Trigger: CAAATGTAAAGAAGGATACCAGGGTGATGGACTGAC...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCGTCAGTCCATCACCCTaGTATCCTTCTTTACATTTG +
Preference number: 4 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTVSPSP*YPSLHL
Trigger: CAAATGTAAAGAAGGATACCAGGGTGATGGACTGAC...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPCHPLK*YHFPLV
Trigger: TACCAAAGGGAAATGGTACCATTTTAAAGGGTGACA...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLDRRNI*CLRRPP
Trigger: TGGTGGCCTCCGAAGACACCATATATTCCTCCTATC...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGTGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLCRSCC*LRSRPV
Trigger: AACAGGCCTACTTCTAAGCCAACAACAAGACCTACA...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCTGTTCTGAGCTCTGTTaGCAGGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFCSELC*QGWWWW
Trigger: CCACCACCACCACCCCTGCCAACAGAGCTCAGAACA...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp AAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCTGTTCTGAGCTCTGTTaGCAGGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSILLMVQHRTHNIIAICCSELC*QGWWWW
Trigger: CCACCACCACCACCCCTGCCAACAGAGCTCAGAACA...GCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATGTTCTGAGCTCTGTTaGCAGGGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VHHISREVNTTHGTTPNTCSELC*QGWWWW
Trigger: CCACCACCACCACCCCTGCCAACAGAGCTCAGAACA...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAAAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQRCTGS*CYSCQS
Trigger: GGACTGACAACTATAGCACCAGCTGCCAGTACACCT...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCAATTTCAGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: QSSGQARTNLSEEGKSISVCLQP*PPFLPH
Trigger: GTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAAC...TGAAATTGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379987.7
ENST00000514622.5
CDS-3UTR CCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCGAGCTCAGCATTTGGTaGGCTCTTCCCCTTTCAATC +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLELSIW*ALPLSI
Trigger: GATTGAAAGGGGAAGAGCCCACCAAATGCTGAGCTC...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCAAGTGAGCTCAGCATTTaGTGGGCTCTTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPSELSI*WALPLS
Trigger: TGAAAGGGGAAGAGCCCACCAAATGCTGAGCTCACT...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTAGTGAGCTCAGCATTTaGTGGGCTCTTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFISELSI*WALPLS
Trigger: TGAAAGGGGAAGAGCCCACCAAATGCTGAGCTCACT...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCAGTGAGCTCAGCATTTaGTGGGCTCTTCCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLSELSI*WALPLS
Trigger: TGAAAGGGGAAGAGCCCACCAAATGCTGAGCTCACT...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTGAAAGAGACACAGGATaGAAGGCAACACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGERDTG*KATPTD
Trigger: ATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTC...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGAGGATGGTATaGCTCACGCATGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGGWRMV*LTHAEC
Trigger: GCATTCAGCATGCGTGAGCCATACCATCCTCCATCC...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTGCCTCCAATATACATaGGATCGAAGCCTTTATGAC +
Preference number: 4 (lower is better)
Translates to: LVATLSVPTLHILENHQWCLQYT*DRSLYD
Trigger: GTCATAAAGGCTTCGATCTCATGTATATTGGAGGCA...CCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGAGGGTGGCGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCTGATACTGACCAAGTaGGCATTCGTCTATGTCATG +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGLILTK*AFVYVM
Trigger: CATGACATAGACGAATGCTCACTTGGTCAGTATCAG...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAGTGGTAGAGGTGTTCTaGGCTCTGTTGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIVVEVF*ALLAGV
Trigger: CACCCCTGCCAACAGAGCTCAGAACACCTCTACCAC...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATACACCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIHLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTG...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGTTCAAACAAGTCATTTaGAGGTTGCCGTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLFKQVI*RLPWNE
Trigger: TTCATTCCACGGCAACCTTCAAATGACTTGTTTGAA...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCATCGATGACACTATTTaGCTGGGCCACCTCCCGTCG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFIDDTI*LGHLPS
Trigger: CGACGGGAGGTGGCCCAGGCAAATAGTGTCATCGAT...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCTACATTCACCATGTTTaGATCGTGGTTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTYIHHV*IVVGTQ
Trigger: CTGTGTGCCAACCACGATGCAAACATGGTGAATGTA...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTTACATTCACCATGTTTaGATCGTGGTTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGYIHHV*IVVGTQ
Trigger: CTGTGTGCCAACCACGATGCAAACATGGTGAATGTA...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCAACCAGGATGACACTTaGACTTGTTTGGCCCGATAC +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLNQDDT*TCLARY
Trigger: GTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTT...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTAACCAGGATGACACTTaGACTTGTTTGGCCCGATAC +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPNQDDT*TCLARY
Trigger: GTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTT...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATGTGTTCATGCACCTGTaGTTACAGGGCCGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDVFMHL*LQGRGF
Trigger: GAAGCCCCGGCCCTGTAAGCACAGGTGCATGAACAC...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCTGCCGTAAGTGTTCATaGACCTGTGCTTACAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGKSILLMVQHRTHNIIACRKCS*TCAYRA
Trigger: GGCCCTGTAAGCACAGGTGCATGAACACTTACGGCA...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCAGTAGCACTTGTAGCTaGCGTAAGTGTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLSSTCS*RKCSCT
Trigger: GGTGCATGAACACTTACGGCAGCTACAAGTGCTACT...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTAGTAGCACTTGTAGCTaGCGTAAGTGTTCATGCACC +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCSSTCS*RKCSCT
Trigger: GGTGCATGAACACTTACGGCAGCTACAAGTGCTACT...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGAAAGTGTTGACACATTaGCTAAATCTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGKVLTH*LNLGQE
Trigger: CTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGAACATCGAGCAAAGCTaGTGCACTGATACTGACCAA +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGNIEQS*CTDTDQ
Trigger: TTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTT...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVLIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLLIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIALIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGTCTAACAATGGCCCCTaGCAAGAAATGCTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLSNNGP*QEMLPY
Trigger: ATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGA...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCCTTTGCTTCATCGTCTaGACTGACTCCTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCLCFIV*TDSSFY
Trigger: ATAGAAAGAGGAGTCAGTGCAGACGATGAAGCAAAG...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKTVHWD*TKAGQK
Trigger: TTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGT...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGTVHWD*TKAGQK
Trigger: TTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAATTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKLMCLR*PCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAA...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACTCACGCATGCTGAATaGCTTCCTGAAAGAGACACA +
Preference number: 4 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPLTHAE*LPERDT
Trigger: TGTGTCTCTTTCAGGAAGGCATTCAGCATGCGTGAG...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTACAACCCAACACTTCTaGCAATTTCCTACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFITTQHF*QFPTAA
Trigger: GGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGT...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCAACACTTGCACTTGTTTaGCCCGATACATTCACCATG +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHATLALV*PDTFTM
Trigger: CATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGT...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACTGCAGGCCAGGGGATaGGCACTGGCACCGTATTTG +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGALQARG*ALAPYL
Trigger: CAAATACGGTGCCAGTGCCCATCCCCTGGCCTGCAG...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGGTCAGTCCATCACCCTaGTATCCTTCTTTACATTTG +
Preference number: 4 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLVSPSP*YPSLHL
Trigger: CAAATGTAAAGAAGGATACCAGGGTGATGGACTGAC...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGCRSCC*LRSRPV
Trigger: AACAGGCCTACTTCTAAGCCAACAACAAGACCTACA...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATGTCAGTCCGGTGGTTaGCCTTTCTGGGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: VHHISREVNTTHGTTPNTCQSGG*PFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACA...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTATTCCCCCTGGGGCTTTaGCTGCCGACACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLFPLGL*LPTLSD
Trigger: ATCTGACAGTGTCGGCAGCCAAAGCCCCAGGGGGAA...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFVCLQP*PPFLPH
Trigger: GTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAAC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCTGTTCTGTGGAACCTaGGAGAGTCCAATTGATAAG +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVLFCGT*ESPIDK
Trigger: CTTATCAATTGGACTCTCCCAGGTTCCACAGAACAG...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCAGTGTACCAGAACACCTaGATCATCCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAVYQNT*IILCFI
Trigger: GATGAAGCAAAGGATGATCCAGGTGTTCTGGTACAC...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR CCA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGGGATGGAGGATGGTATaGCTCACGCATGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: YILPLLKGLMIYFPPPALGWRMV*LTHAEC
Trigger: GCATTCAGCATGCGTGAGCCATACCATCCTCCATCC...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAAATCAGGATGGAGGATaGTATGGCTCACGCATGCTG +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGNQDGG*YGSRML
Trigger: CAGCATGCGTGAGCCATACCATCCTCCATCCTGATT...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAGGCTGTTCACTGCCTTaGTCAAGAGGAGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: VHHISREVNTTHGTTPNTGCSLP*SRGAGM
Trigger: CATCCCAGCTCCTCTTGACCAAGGCAGTGAACAGCC...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427316.6
3UTR CAA 72 bp CCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATaGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: PVFQGGYHCSLG*HKSRPEKPGSP
Trigger: TGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCCTGATACTGACCAAGTaGGCATTCGTCTATGTCATG +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLLILTK*AFVYVM
Trigger: CATGACATAGACGAATGCTCACTTGGTCAGTATCAG...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCTGATACTGACCAAGTaGGCATTCGTCTATGTCATG +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQLILTK*AFVYVM
Trigger: CATGACATAGACGAATGCTCACTTGGTCAGTATCAG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCATTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAFPFGT*IGPEGS
Trigger: TGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAA...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDSPLGF*GSVCTL
Trigger: CAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGA...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTCATTGTCTTTCTCCCTaGTCCATCCACAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPHCLSP*SIHKVH
Trigger: ATGGACTTTGTGGATGGATCAGGGAGAAAGACAATG...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCATTGTCTTTCTCCCTaGTCCATCCACAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQHCLSP*SIHKVH
Trigger: ATGGACTTTGTGGATGGATCAGGGAGAAAGACAATG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR TCA 90 bp AAGTCAATTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACCAGCCCCTCGCAAGGTaGTCTGTGTTTGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSISQAHCTSYLKGSQYYQPLAR*SVFASS
Trigger: GCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTG...GTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAATTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR TCA 90 bp AGTTGGGGGTTCATGGATCTTAGAATTCCAACTTGCCCTGCTCCTCCAGTGTGTTTCAAACAAGTCATTTaGAGGTTGCCGTGGAATGAA +
Preference number: 4 (lower is better)
Translates to: SWGFMDLRIPTCPAPPVCFKQVI*RLPWNE
Trigger: TTCATTCCACGGCAACCTTCAAATGACTTGTTTGAA...ACACACTGGAGGAGCAGGGCAAGTTGGAATTCTAAGATCCATGAACCCCCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACTTCATCGTCTGCACTaGCTCCTCTTTCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: CLRCPCISRRVSLFIGIALHRLH*LLFLFQ
Trigger: TTGAAATAGAAAGAGGAGTCAGTGCAGACGATGAAG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR TCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCATTCCTGCTGGGTCCCTaGTTGGTTCCCAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPFLLGP*LVPSAS
Trigger: ACTTGCACTGGGAACCAATCAGGGACCCAGCAGGAA...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504787.1
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAAAACATCGAGCAAAGCTaGTGCACTGATACTGACCAA +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQNIEQS*CTDTDQ
Trigger: TTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTT...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGAACATCGAGCAAAGCTaGTGCACTGATACTGACCAA +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQNIEQS*CTDTDQ
Trigger: TTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTT...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp AAAAGTCAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCATGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: KSQSSGQARTNLSEEGKSCTGSW*YSCQSG
Trigger: ACCGGACTGACAACTATAGCACCAGCTGCCAGTACA...TGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379987.7
ENST00000514622.5
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAACTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQLIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCTTTGCTTCATCGTCTaGACTGACTCCTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGLCFIV*TDSSFY
Trigger: ATAGAAAGAGGAGTCAGTGCAGACGATGAAGCAAAG...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGCTCACTCTCATAATTTaGTACAAGGAGCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKLTLII*YKEHLV
Trigger: TACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCACCATGTTTGCATCGTaGTTGGCACACAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFTMFAS*LAHRLT
Trigger: TGTCAGCCTGTGTGCCAACCACGATGCAAACATGGT...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCAACACTTGCACTTGTTTaGCCCGATACATTCACCATG +
Preference number: 4 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPTLALV*PDTFTM
Trigger: CATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGT...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGGTCAGTCCATCACCCTaGTATCCTTCTTTACATTTG +
Preference number: 4 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGVSPSP*YPSLHL
Trigger: CAAATGTAAAGAAGGATACCAGGGTGATGGACTGAC...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCTGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGCRSCC*LRSRPV
Trigger: AACAGGCCTACTTCTAAGCCAACAACAAGACCTACA...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTTGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGCRSCC*LRSRPV
Trigger: AACAGGCCTACTTCTAAGCCAACAACAAGACCTACA...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTATGTCAGTCCGGTGGTTaGCCTTTCTGGGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLCQSGG*PFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACA...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAGTTGGGGGTTCATaGATCTTAGAATTCCAACTT +
Preference number: 4 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCTVGGS*ILEFQL
Trigger: AAGTTGGAATTCTAAGATCCATGAACCCCCAACTGT...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp CCCCTGCCAAGAAATGCTCCCTTATACTCTAGTCTAAGCCAGTTTCCTCTTGTTTTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PLPRNAPLYSSLSQFPLVFPFGT*IGPEGS
Trigger: TGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAA...AACAAGAGGAAACTGGCTTAGACTAGAGTATAAGGGAGCATTTCTTGGCAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TTTACACAAAACACAATACTACTAAGGAGGGATTACGTGCCCACTCTACATAATTTCCTTCTGACCCACTaGCCCACTCTTCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: FTQNTILLRRDYVPTLHNFLLTH*PTLLLG
Trigger: GCCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAA...ATTATGTAGAGTGGGCACGTAATCCCTCCTTAGTAGTATTGTGTTTTGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCAACCAGGATGACACTTaGACTTGTTTGGCCCGATAC +
Preference number: 4 (lower is better)
Translates to: QGKSILLMVQHRTHNIIANQDDT*TCLARY
Trigger: GTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTT...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGAAAGTGTTGACACATTaGCTAAATCTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQKVLTH*LNLGQE
Trigger: CTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTT...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTAAAGTGTTGACACATTaGCTAAATCTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ALMCLRCPCISRRVSLFIKVLTH*LNLGQE
Trigger: CTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTT...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCAATCCTTCTTTACATTTaGACTTGTAGGACCCACGTA +
Preference number: 4 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHAILLYI*TCRTHV
Trigger: TACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGAT...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTATCCTTCTTTACATTTaGACTTGTAGGACCCACGTA +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGILLYI*TCRTHV
Trigger: TACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGAT...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTCTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGLIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCCAGATATTGTCCACCTaGTGGGTCCCTGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFQILST*WVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGGTGGACAATATCTG...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CGTTACCACAACCCAACACTTCTGCCAATTTCCTACTGCTGCCAATATAAGGTCAAACCATCAATGGTTTaGCCCTCAGTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RYHNPTLLPISYCCQYKVKPSMV*PSVFSS
Trigger: AGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTT...GACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTGGTAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTAAACCATCAATGGTTTaGCCCTCAGTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVTHEAERMHPMKISLNCKPSMV*PSVFSS
Trigger: AGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTT...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR GCA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQTVHWD*TKAGQK
Trigger: TTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGT...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAAACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQTVHWD*TKAGQK
Trigger: TTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGT...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAACTGCCAATTTCCTACTaGTGCCAATATAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQLPISY*CQYKVM
Trigger: CATGACCTTATATTGGCAGCAGTAGGAAATTGGCAG...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGATGCTTCCTCTCACTCTaGAACAGGATCCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGCFLSL*NRILFL
Trigger: CAGAAAAAGGATCCTGTTGCAGAGTGAGAGGAAGCA...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp AGTCAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCAATTCTTAGAATTCCAACTTaGCCTGCTCCTCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SQSSGQARTNLSEEGKSILRIPT*PAPPVC
Trigger: ACACACTGGAGGAGCAGGGCAAGTTGGAATTCTAAG...AATTGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATACCAGGGGATGGGCACTaGCACCGTATTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIPGDGH*HRICPL
Trigger: TAAAGGACAAATACGGTGCCAGTGCCCATCCCCTGG...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAATGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQCRSCC*LRSRPV
Trigger: AACAGGCCTACTTCTAAGCCAACAACAAGACCTACA...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDNCNPS*RCTGSW
Trigger: CCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTT...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGVCLQP*PPFLPH
Trigger: GTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAAC...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACTTGAAAACCATCAATaGTTTGCCCCTCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPLENHQ*FAPQSS
Trigger: AGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAG...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGAATATTACTGTTCTGTaGAACCTGGGAGAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SCSILSAYGEQLVATLSVNITVL*NLGESN
Trigger: ATTGGACTCTCCCAGGTTCCACAGAACAGTAATATT...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATGGATGGAGGATGGTATaGCTCACGCATGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDGWRMV*LTHAEC
Trigger: GCATTCAGCATGCGTGAGCCATACCATCCTCCATCC...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CACAACCCAACACTTCTGCCAATTTCCTACTGCTGCCAATATAAGGTCATGGAAGGGAGGAAATACAGTTaGGGGTTCATGGATCTTAGA +
Preference number: 4 (lower is better)
Translates to: HNPTLLPISYCCQYKVMEGRKYS*GFMDLR
Trigger: TCTAAGATCCATGAACCCCCAACTGTATTTCCTCCC...TTCCATGACCTTATATTGGCAGCAGTAGGAAATTGGCAGAAGTGTTGGGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCTTGGTCAAGAGGAGCTaGGATGTGCTCGTCTTGATT +
Preference number: 4 (lower is better)
Translates to: QGKSILLMVQHRTHNIIALVKRS*DVLVLI
Trigger: AATCAAGACGAGCACATCCCAGCTCCTCTTGACCAA...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427316.6
CDS-3UTR TCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCACAGCCATACTaGCAGTTTGCCATGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHITSQPY*QFAMEQ
Trigger: CTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGT...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTTTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSFPFGT*IGPEGS
Trigger: TGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAA...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCAATCATACTGATGAGGTaGAGGAAAGGTCTGCCGGTG +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPIILMR*RKGLPV
Trigger: CACCGGCAGACCTTTCCTTCACCTCATCAGTATGAT...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR TCA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTCTTCATCGTCTGCACTaGCTCCTCTTTCTATTTCAA +
Preference number: 4 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGLHRLH*LLFLFQ
Trigger: TTGAAATAGAAAGAGGAGTCAGTGCAGACGATGAAG...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR TCA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCGGTCATGGAACTGGATaGCATTTCACCATGTATTTT +
Preference number: 4 (lower is better)
Translates to: AKITCHTRSRENAPDENLGHGTG*HFTMYF
Trigger: AAAATACATGGTGAAATGTCATCCAGTTCCATGACC...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFIEQSC*TDTDQV
Trigger: CACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGAT...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCAACATCGAGCAAAGCTaGTGCACTGATACTGACCAA +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFNIEQS*CTDTDQ
Trigger: TTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTT...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CCCCTGCCAAGAAATGCTCCCTTATACTCTAGTCTAAGCCAGTTTCCTCTTGTTATCCTTCTTTACATTTaGACTTGTAGGACCCACGTA +
Preference number: 4 (lower is better)
Translates to: PLPRNAPLYSSLSQFPLVILLYI*TCRTHV
Trigger: TACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGAT...AACAAGAGGAAACTGGCTTAGACTAGAGTATAAGGGAGCATTTCTTGGCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAAATCCTTCTTTACATTTaGACTTGTAGGACCCACGTA +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQILLYI*TCRTHV
Trigger: TACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGAT...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR GCA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGCTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YILPLLKGLMIYFPPPALLIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR GCA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTAAACCATCAATGGTTTaGCCCTCAGTCTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSKPSMV*PSVFSS
Trigger: AGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTT...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCTCTAACAATGGCCCCTaGCAAGAAATGCTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFSNNGP*QEMLPY
Trigger: ATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGA...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp AAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCTTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KSILLMVQHRTHNIIAICLMCLR*PCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAA...GCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAACCAATTTCCTACTGCTaGCAATATAAGGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQPISYC*QYKVME
Trigger: TTCCATGACCTTATATTGGCAGCAGTAGGAAATTGG...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCAATGACACTATTTGCCTaGGCCACCTCCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGAMTLFA*ATSRRT
Trigger: AGTTCGACGGGAGGTGGCCCAGGCAAATAGTGTCAT...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACACCATGTTTGCATCGTaGTTGGCACACAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: IISQGKSILLMVQHRTHNTMFAS*LAHRLT
Trigger: TGTCAGCCTGTGTGCCAACCACGATGCAAACATGGT...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLCHPLK*YHFPLV
Trigger: TACCAAAGGGAAATGGTACCATTTTAAAGGGTGACA...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTCHPLK*YHFPLV
Trigger: TACCAAAGGGAAATGGTACCATTTTAAAGGGTGACA...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGCHPLK*YHFPLV
Trigger: TACCAAAGGGAAATGGTACCATTTTAAAGGGTGACA...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTAGAGCTCAGCATTTGGTaGGCTCTTCCCCTTTCAATC +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLELSIW*ALPLSI
Trigger: GATTGAAAGGGGAAGAGCCCACCAAATGCTGAGCTC...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCAAATATTACTGTTCTGTaGAACCTGGGAGAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPNITVL*NLGESN
Trigger: ATTGGACTCTCCCAGGTTCCACAGAACAGTAATATT...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGAAAGAGACACAGGATaGAAGGCAACACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFERDTG*KATPTD
Trigger: ATCTGTGGGTGTTGCCTTCCATCCTGTGTCTCTTTC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCATAAGGTCATGGAACTaGATGACATTTCACCATGTA +
Preference number: 4 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGIRSWN*MTFHHV
Trigger: TACATGGTGAAATGTCATCCAGTTCCATGACCTTAT...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGAAAATCTGTTCCAATaGAGTTTCCCCCTATGCTTC +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGENLFQ*SFPLCF
Trigger: GAAGCATAGGGGGAAACTCCATTGGAACAGATTTTC...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
3UTR CAA 72 bp TGCCAACCCTTCATATACTTGAAAACCATCAATGGTTaGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAAT +
Preference number: 4 (lower is better)
Translates to: CQPFIYLKTING*PLSLLFSRLNN
Trigger: ATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGTGCCTCCAATATACATaGGATCGAAGCCTTTATGAC +
Preference number: 4 (lower is better)
Translates to: YILPLLKGLMIYFPPPALCLQYT*DRSLYD
Trigger: GTCATAAAGGCTTCGATCTCATGTATATTGGAGGCA...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp AAAAGTCAGAGTTCAGGTCAGGCCAGAACTAACTTAAGTGAAGAGGGTAAGTCATGCCTCCAATATACATaGGATCGAAGCCTTTATGAC +
Preference number: 4 (lower is better)
Translates to: KSQSSGQARTNLSEEGKSCLQYT*DRSLYD
Trigger: GTCATAAAGGCTTCGATCTCATGTATATTGGAGGCA...TGACTTACCCTCTTCACTTAAGTTAGTTCTGGCCTGACCTGAACTCTGACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379987.7
ENST00000514622.5
CDS-3UTR GCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCAATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPIEQSC*TDTDQV
Trigger: CACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGAT...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTG +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDIEQSC*TDTDQV
Trigger: CACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGAT...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTCAGATATTGTCCACCTaGTGGGTCCCTGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGQILST*WVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGGTGGACAATATCTG...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCACTGTTCATTGGGATTaGACAAAAGCAGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFTVHWD*TKAGQK
Trigger: TTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGT...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTGATGTGTCTGCGATaGCCCTGTATTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDLMCLR*PCISRR
Trigger: CCTCCTTGAAATACAGGGGCATCGCAGACACATCAA...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGACTCACTCTCATAATTTaGTACAAGGAGCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGLTLII*YKEHLV
Trigger: TACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTCTTCTCTTCAGGTTTCCTATCCTTTaGAGAGATCAAACTCAAGGC +
Preference number: 4 (lower is better)
Translates to: QPFIYLKTINGLPLSLLFRFPIL*RDQTQG
Trigger: GCCTTGAGTTTGATCTCTGCAAAGGATAGGAAACCT...GAAGAGAAGACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTATCTAAGCATGGGACTTaGTTCCTATCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLSKHGT*FLSHPD
Trigger: GTCAGGATGGGATAGGAAGCAAGTCCCATGCTTAGA...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACCATGTTTGCATCGTaGTTGGCACACAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGTMFAS*LAHRLT
Trigger: TGTCAGCCTGTGTGCCAACCACGATGCAAACATGGT...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCAACCATGTTTGCATCGTaGTTGGCACACAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGATMFAS*LAHRLT
Trigger: TGTCAGCCTGTGTGCCAACCACGATGCAAACATGGT...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCACACTTGCACTTGTTTaGCCCGATACATTCACCATG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFTLALV*PDTFTM
Trigger: CATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGT...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp GGTTTGCCCCTCAGTCTTCTCTTCTCCAGGCTCAATAATCCCAGTTCCTTTAATTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GLPLSLLFSRLNNPSSFNCHPLK*YHFPLV
Trigger: TACCAAAGGGAAATGGTACCATTTTAAAGGGTGACA...ATTAAAGGAACTGGGATTATTGAGCCTGGAGAAGAGAAGACTGAGGGGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIDRRNI*CLRRPP
Trigger: TGGTGGCCTCCGAAGACACCATATATTCCTCCTATC...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGRCTGS*CYSCQS
Trigger: GGACTGACAACTATAGCACCAGCTGCCAGTACACCT...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCCTGTTCTGTGGAACCTaGGAGAGTCCAATTGATAAG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFLFCGT*ESPIDK
Trigger: CTTATCAATTGGACTCTCCCAGGTTCCACAGAACAG...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR TCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCTGCCTCCAATATACATaGGATCGAAGCCTTTATGAC +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFCLQYT*DRSLYD
Trigger: GTCATAAAGGCTTCGATCTCATGTATATTGGAGGCA...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VHHISREVNTTHGTTPNTFPFGT*IGPEGS
Trigger: TGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAA...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACTACATTCACCATGTTTaGATCGTGGTTGGCACACAG +
Preference number: 4 (lower is better)
Translates to: IISQGKSILLMVQHRTHNYIHHV*IVVGTQ
Trigger: CTGTGTGCCAACCACGATGCAAACATGGTGAATGTA...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAAAAGTGTTGACACATTaGCTAAATCTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VHHISREVNTTHGTTPNTKVLTH*LNLGQE
Trigger: CTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTT...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACAACATCGAGCAAAGCTaGTGCACTGATACTGACCAA +
Preference number: 4 (lower is better)
Translates to: IISQGKSILLMVQHRTHNNIEQS*CTDTDQ
Trigger: TTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTT...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCCTTTGCTTCATCGTCTaGACTGACTCCTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFLCFIV*TDSSFY
Trigger: ATAGAAAGAGGAGTCAGTGCAGACGATGAAGCAAAG...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR CCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGTCAGTCCATCACCCTaGTATCCTTCTTTACATTTG +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFVSPSP*YPSLHL
Trigger: CAAATGTAAAGAAGGATACCAGGGTGATGGACTGAC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCACTGTTCTGTGGAACCTaGGAGAGTCCAATTGATAAG +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPLFCGT*ESPIDK
Trigger: CTTATCAATTGGACTCTCCCAGGTTCCACAGAACAG...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CCA 90 bp CAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACGTGTACCAGAACACCTaGATCATCCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QAHCTSYLKGSQYYSWYNVYQNT*IILCFI
Trigger: GATGAAGCAAAGGATGATCCAGGTGTTCTGGTACAC...GTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR CCA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACGTGTACCAGAACACCTaGATCATCCTTTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: IISQGKSILLMVQHRTHNVYQNT*IILCFI
Trigger: GATGAAGCAAAGGATGATCCAGGTGTTCTGGTACAC...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR CCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAGGTATCACTGTTCATTaGGATTGCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIGITVH*DCTKAG
Trigger: GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACC...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATATTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIFPFGT*IGPEGS
Trigger: TGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAA...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTAAAAGTGTTGACACATTaGCTAAATCTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLKVLTH*LNLGQE
Trigger: CTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTT...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR GCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTCTGATTGGTTCCCAGTaGAAGTCATTGTCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGLIGSQ*KSLSFS
Trigger: GGAGAAAGACAATGACTTGCACTGGGAACCAATCAG...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR GCA 90 bp AAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCCTCACTCTCATAATTTaGTACAAGGAGCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: KSILLMVQHRTHNIIAICLTLII*YKEHLV
Trigger: TACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG...GCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTAATTCCAACTTGCCCTaGTCCTCCAGTGTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGNSNLP*SSSVCK
Trigger: TTTACACACACTGGAGGAGCAGGGCAAGTTGGAATT...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCAACACTTGCACTTGTTTaGCCCGATACATTCACCATG +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGATLALV*PDTFTM
Trigger: CATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGT...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACACTTGCACTTGTTTaGCCCGATACATTCACCATG +
Preference number: 4 (lower is better)
Translates to: FHKHIVHHISREVNTTHGTLALV*PDTFTM
Trigger: CATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGT...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CCA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCATGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPCRSCC*LRSRPV
Trigger: AACAGGCCTACTTCTAAGCCAACAACAAGACCTACA...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR TCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCATGCCTCCAATATACATaGGATCGAAGCCTTTATGAC +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGACLQYT*DRSLYD
Trigger: GTCATAAAGGCTTCGATCTCATGTATATTGGAGGCA...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR TCA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCGACAAACCTCAGGAATaGTGCCTTTTAAAAGTTACA +
Preference number: 4 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFDKPQE*CLLKVT
Trigger: TGTAACTTTTAAAAGGCATCATTCCTGAGGTTTGTC...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR GCA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCAAAAGTGTTGACACATTaGCTAAATCTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGAKVLTH*LNLGQE
Trigger: CTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTT...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACATCCTTCTTTACATTTaGACTTGTAGGACCCACGTA +
Preference number: 4 (lower is better)
Translates to: QAHCTSYLKGSQYYSWYNILLYI*TCRTHV
Trigger: TACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGAT...GTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR GCA 90 bp CAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACAAGTCATTTGAAGGTTaGCGTGGAATGAACACATCT +
Preference number: 4 (lower is better)
Translates to: QAHCTSYLKGSQYYSWYNKSFEG*RGMNTS
Trigger: AGATGTGTTCATTCCACGGCAACCTTCAAATGACTT...GTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATAAGTCATTTGAAGGTTaGCGTGGAATGAACACATCT +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDKSFEG*RGMNTS
Trigger: AGATGTGTTCATTCCACGGCAACCTTCAAATGACTT...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
CDS-3UTR GCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATCTCACTCTCATAATTTaGTACAAGGAGCACCTTGTA +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDLTLII*YKEHLV
Trigger: TACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATGCCAATATAAGGTCATaGAACTGGATGACATTTCAC +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDANIRS*NWMTFH
Trigger: GTGAAATGTCATCCAGTTCCATGACCTTATATTGGC...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CCA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDCHPLK*YHFPLV
Trigger: TACCAAAGGGAAATGGTACCATTTTAAAGGGTGACA...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS CCA 90 bp ACCAGCACCAGCGCCAGGAGAAAATCCATGTTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGCGCGAGGAACAGGTTGGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TSTSARRKSMLGSGS*GAAQWRARNRLGWW
Trigger: CCACCACCCCAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCTGGCGCTGGTGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS CCA 90 bp GGTAGAGCGAGGATACCAGCACCAGCGCCAGGAGAAAATCCATGTTaGGCAGCGGGTCCTGGGGCGCAGCGCAGTGGCGCGCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: GRARIPAPAPGENPC*AAGPGAQRSGARGT
Trigger: TGTTCCTCGCGCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCTGGCGCTGGTGCTGGTATCCTCGCTCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS GCA 90 bp CTCACAAACACCTGGAGTGTGCCAGAGTGCAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGGTCCCCTGAATGCATGAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: LTNTWSVPECSPVTL*LNDRHRSPECMRRP
Trigger: CGGCCGCCTCATGCATTCAGGGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CCA 90 bp TGCCTCCAGCCATGGCCACCATTTCTTCCCCACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACAAACACCTGGAGTGTGCCAGAGTGC +
Preference number: 5 (lower is better)
Translates to: CLQPWPPFLPHRAAP*APCFLTNTWSVPEC
Trigger: GCACTCTGGCACACTCCAGGTGTTTGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CCA 90 bp TTGATGTCAGCCCCTCGCAAGGTGATCTGTGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCACAGGGCTGCTCCGTGGGCACCGTGT +
Preference number: 5 (lower is better)
Translates to: LMSAPRKVICVCLQP*PPFLPHRAAPWAPC
Trigger: ACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTGACATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCGCGCGAGGAACAGGTaGGGGTGGTGGGCGCCGATG +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHRARNR*GWWAPM
Trigger: CATCGGCGCCCACCACCCCAACCTGTTCCTCGCGCG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS GCA 90 bp CTGTGTTTGCCTCCAGCCATGGCCACCATTTCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTTTCTCACAAACACCTGGAGTGTGCC +
Preference number: 5 (lower is better)
Translates to: LCLPPAMATISSPQG*SVGTVFSHKHLECA
Trigger: GGCACACTCCAGGTGTTTGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS-3UTR CAA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCCGCGCGAGGAACAGGTaGGGGTGGTGGGCGCCGATG +
Preference number: 5 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCRARNR*GWWAPM
Trigger: CATCGGCGCCCACCACCCCAACCTGTTCCTCGCGCG...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCCGCGCGAGGAACAGGTaGGGGTGGTGGGCGCCGATG +
Preference number: 5 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTRARNR*GWWAPM
Trigger: CATCGGCGCCCACCACCCCAACCTGTTCCTCGCGCG...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTTGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTCSPVT*CLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCA...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTCGCGCGAGGAACAGGTaGGGGTGGTGGGCGCCGATG +
Preference number: 5 (lower is better)
Translates to: LVTHEAERMHPMKISLNCRARNR*GWWAPM
Trigger: CATCGGCGCCCACCACCCCAACCTGTTCCTCGCGCG...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGAGCAGGTCAGGGCACTaGAGCAGGAACCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRSRSGH*SRNHPA
Trigger: TGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGCT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: LVHMENSWSPPSLCQPFICSPVT*CLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCA...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCTGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFCSPVT*CLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCA...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS GCA 90 bp CCTGTTGTCAACTGTAATCCCTCCTGGAGGTGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGTGGTTGGCCTTTCTGGGGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: PVVNCNPSWRCTGSW*YSCQSGGWPFWGCR
Trigger: CCTACAACCCCAGAAAGGCCAACCACCGGACTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTTGACAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGAGGAGAAAATCCATGTaGGGCAGCGGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLRRKSM*GSGSWG
Trigger: GCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCT...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGAGGAGAAAATCCATGTaGGGCAGCGGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKRRKSM*GSGSWG
Trigger: GCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCT...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGAGCAGGTCAGGGCACTaGAGCAGGAACCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKSRSGH*SRNHPA
Trigger: TGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGCT...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGAGCAGGTCAGGGCACTaGAGCAGGAACCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGSRSGH*SRNHPA
Trigger: TGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGCT...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGCAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACC +
Preference number: 5 (lower is better)
Translates to: PCNQDGGWYGSRMLNAFLQGDLC*PPAMAT
Trigger: GGTGGCCATGGCTGGAGGCAAACACAGATCACCTTG...CAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS CCA 90 bp TACCCTGTTGTCAACTGTAATCCCTCCTGGAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCCGGTGGTTGGCCTTTCTGGGGTTGT +
Preference number: 5 (lower is better)
Translates to: YPVVNCNPSWRCTGS*CYSCQSGGWPFWGC
Trigger: ACAACCCCAGAAAGGCCAACCACCGGACTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTTGACAACAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTAGGAGAAAATCCATGTaGGGCAGCGGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGRRKSM*GSGSWG
Trigger: GCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCT...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGAGGAGAAAATCCATGTaGGGCAGCGGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLRRKSM*GSGSWG
Trigger: GCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCT...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGATGTTTGCATCGTGGTaGGCACACAGGCTGACACTG +
Preference number: 5 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRMFASW*AHRLTL
Trigger: CAGTGTCAGCCTGTGTGCCAACCACGATGCAAACAT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGCCATACTGACAGTTaGCCATGGAGCAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RQHPQMALMCLRCPCISRSHTDS*PWSRSG
Trigger: CCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCT...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACAGCCATACTGACAGTTaGCCATGGAGCAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: SGWRMVWLTHAECLPERDSHTDS*PWSRSG
Trigger: CCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCT...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACAGCCATACTGACAGTTaGCCATGGAGCAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHSHTDS*PWSRSG
Trigger: CCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCT...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLCSPVT*CLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATTGAAGACGACGCTCTaGATGTCAGCCCCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: LVHMENSWSPPSLCQPFILKTTL*MSAPRK
Trigger: CTTGCGAGGGGCTGACATCAAGAGCGTCGTCTTCAA...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CAA 90 bp GGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGCACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 5 (lower is better)
Translates to: GGYHCSLGLHKSRPEKPGHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...CCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCCACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 5 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCGGTTGGCACACAGCTTaGAGCTGGCACCTTATCCTG +
Preference number: 5 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTGWHTA*SWHLIL
Trigger: CAGGATAAGGTGCCAGCTCAAAGCTGTGTGCCAACC...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453617.6
CDS TCA 90 bp GGGCACTGGCACCGTATTTGTCCTTTAACAACATCACAGCCATACTaGCAGTTTGCCATGGAGCAGGTCAGGGCACTTGAGCAGGAACCA +
Preference number: 5 (lower is better)
Translates to: GHWHRICPLTTSQPY*QFAMEQVRALEQEP
Trigger: TGGTTCCTGCTCAAGTGCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000504304.5
ENST00000505821.1
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 90 bp TCTGAGCTCTGTTGGCAGGGGTGGTGGTGGTGGTGGAGTAGGAATTaGTGTTGGCTTTGGTGTAGGTCTTGTTGTTGGCTTAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SELCWQGWWWWWSRN*CWLWCRSCCWLRSR
Trigger: CCTACTTCTAAGCCAACAACAAGACCTACACCAAAGCCAACACCAATTCCTACTCCACCACCACCACCACCCCTGCCAACAGAGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 90 bp TTTCTGAGGGTCTGTCTGTACCCTGTTGTCAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGGTGCTATAGTTGTCAGTCCGGTGGT +
Preference number: 5 (lower is better)
Translates to: FLRVCLYPVVNCNPS*RCTGSWCYSCQSGG
Trigger: ACCACCGGACTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTTGACAACAGGGTACAGACAGACCCTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATAATGTTTGCATCGTGGTaGGCACACAGGCTGACACTG +
Preference number: 5 (lower is better)
Translates to: LVHMENSWSPPSLCQPFIMFASW*AHRLTL
Trigger: CAGTGTCAGCCTGTGTGCCAACCACGATGCAAACAT...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACATGTTTGCATCGTGGTaGGCACACAGGCTGACACTG +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHMFASW*AHRLTL
Trigger: CAGTGTCAGCCTGTGTGCCAACCACGATGCAAACAT...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGTGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQCSPVT*CLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCA...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCCAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACC +
Preference number: 5 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTQGDLC*PPAMAT
Trigger: GGTGGCCATGGCTGGAGGCAAACACAGATCACCTTG...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGTTGAAGACGACGCTCTaGATGTCAGCCCCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKLKTTL*MSAPRK
Trigger: CTTGCGAGGGGCTGACATCAAGAGCGTCGTCTTCAA...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp ATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCACACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 5 (lower is better)
Translates to: ICYKEHLVIRMEDGMAHAHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...TGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 5 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACAGGCAAACTTGTGGCTaGGTGATCCAGGGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SGWRMVWLTHAECLPERDRQTCG*VIQGLE
Trigger: TTCCAACCCCTGGATCACCAAGCCACAAGTTTGCCT...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS GCA 90 bp GAACTACACCTTGTCTCCAGTTGCTACAAGTCAAGTCCACCTGCATaGAGACAGCTACAATTGTCTGCTGGGTCCCTGATTGGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: ELHLVSSCYKSSPPA*RQLQLSAGSLIGSQ
Trigger: CTGGGAACCAATCAGGGACCCAGCAGACAATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTGTAGCAACTGGAGACAAGGTGTAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS CCA 90 bp TGGCAGGGGTGGTGGTGGTGGTGGAGTAGGAATTGGTGTTGGCTTTaGTGTAGGTCTTGTTGTTGGCTTAGAAGTAGGCCTGTTGGTAAT +
Preference number: 5 (lower is better)
Translates to: WQGWWWWWSRNWCWL*CRSCCWLRSRPVGN
Trigger: ATTACCAACAGGCCTACTTCTAAGCCAACAACAAGACCTACACCAAAGCCAACACCAATTCCTACTCCACCACCACCACCACCCCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACGCGCGAGGAACAGGTaGGGGTGGTGGGCGCCGATG +
Preference number: 5 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGARARNR*GWWAPM
Trigger: CATCGGCGCCCACCACCCCAACCTGTTCCTCGCGCG...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTAGGAGAAAATCCATGTaGGGCAGCGGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: LTLIICYKEHLVIRMEDGRRKSM*GSGSWG
Trigger: GCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCT...ACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCATACATTCACCATGTTaGCATCGTGGTTGGCACACA +
Preference number: 5 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPIHSPC*HRGWHT
Trigger: TGTGTGCCAACCACGATGCAAACATGGTGAATGTAT...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GACACAGGATGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCGCACTGGCACCGTATTaGTCCTTTAACAACATCACA +
Preference number: 5 (lower is better)
Translates to: DTGWKATPTDGFDVSAMPALAPY*SFNNIT
Trigger: TGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGC...GGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCATCCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CCCCTGCCAAGAAATGCTCCCTTATACTCTAGTCTAAGCCAGTTTCCTCTTGTTCAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACC +
Preference number: 5 (lower is better)
Translates to: PLPRNAPLYSSLSQFPLVQGDLC*PPAMAT
Trigger: GGTGGCCATGGCTGGAGGCAAACACAGATCACCTTG...AACAAGAGGAAACTGGCTTAGACTAGAGTATAAGGGAGCATTTCTTGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAACAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACC +
Preference number: 5 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKQGDLC*PPAMAT
Trigger: GGTGGCCATGGCTGGAGGCAAACACAGATCACCTTG...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTTGAAGACGACGCTCTaGATGTCAGCCCCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLLKTTL*MSAPRK
Trigger: CTTGCGAGGGGCTGACATCAAGAGCGTCGTCTTCAA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCATTGAAGACGACGCTCTaGATGTCAGCCCCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: CLRCPCISRRVSLFIGIALKTTL*MSAPRK
Trigger: CTTGCGAGGGGCTGACATCAAGAGCGTCGTCTTCAA...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGCACTGTTCATTGGGATaGCACAAAAGCAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRHCSLG*HKSRPE
Trigger: TTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTG...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACTTGGTGATCCAGGGGTaGGAAAAGAGGCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: SGWRMVWLTHAECLPERDLVIQG*EKRLFT
Trigger: AGTGAACAGCCTCTTTTCCAACCCCTGGATCACCAA...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS-3UTR CAA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGCCCTTGAAGGCAAACTaGTGGCTTGGTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGPLKAN*WLGDPG
Trigger: CCCTGGATCACCAAGCCACAAGTTTGCCTTCAAGGG...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS-3UTR CAA 90 bp TCAGGATGGAGGATGGTATGGCTCACGCATGCTGAATGCCTTCCTGAAAGAGACATGTTTGCATCGTGGTaGGCACACAGCTTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SGWRMVWLTHAECLPERDMFASW*AHSFEL
Trigger: CAGCTCAAAGCTGTGTGCCAACCACGATGCAAACAT...GTCTCTTTCAGGAAGGCATTCAGCATGCGTGAGCCATACCATCCTCCATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453617.6
CDS GCA 90 bp TGGAGAACTACACCTTGTCTCCAGTTGCTACAAGTCAAGTCCACCTaGATGCAGACAGCTACAATTGTCTGCTGGGTCCCTGATTGGTTC +
Preference number: 5 (lower is better)
Translates to: WRTTPCLQLLQVKST*MQTATIVCWVPDWF
Trigger: GAACCAATCAGGGACCCAGCAGACAATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTGTAGCAACTGGAGACAAGGTGTAGTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CAA 90 bp AGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGGACACTTGCACTTGTTaGGCCCGATACATTCACCAT +
Preference number: 5 (lower is better)
Translates to: RQHPQMALMCLRCPCISRDTCTC*ARYIHH
Trigger: ATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTC...CCTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCGACACTTGCACTTGTTaGGCCCGATACATTCACCAT +
Preference number: 5 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTDTCTC*ARYIHH
Trigger: ATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTC...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TATATTCTGCCGTTACTCAAAGGCTTAATGATTTATTTTCCCCCTCCAGCCCTGAGCAGGTCAGGGCACTaGAGCAGGAACCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: YILPLLKGLMIYFPPPALSRSGH*SRNHPA
Trigger: TGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGCT...CAGGGCTGGAGGGGGAAAATAAATCATTAAGCCTTTGAGTAACGGCAGAATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCAGCCATACTGACAGTTaGCCATGGAGCAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: AKITCHTRSRENAPDENLSHTDS*PWSRSG
Trigger: CCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCT...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGAGCCATACTGACAGTTaGCCATGGAGCAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQSHTDS*PWSRSG
Trigger: CCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCT...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTAGCCATACTGACAGTTaGCCATGGAGCAGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ALMCLRCPCISRRVSLFISHTDS*PWSRSG
Trigger: CCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCT...AATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATATCTGTCTGTACCCTGTaGTCAACTGTAATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: LVHMENSWSPPSLCQPFISVCTL*STVIPP
Trigger: AGGAGGGATTACAGTTGACAACAGGGTACAGACAGA...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCATCTGTCTGTACCCTGTaGTCAACTGTAATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: GRQHPQMALMCLRCPCISSVCTL*STVIPP
Trigger: AGGAGGGATTACAGTTGACAACAGGGTACAGACAGA...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHSQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGCCAACCCTTCATAAGCAGCCAAGATAACTaGTCACACACGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LVHMENSWSPPSLCQPFISSQDN*SHTKQR
Trigger: TCTCTGCTTCGTGTGTGACAAGTTATCTTGGCTGCT...TATGAAGGGTTGGCACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp AGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTGTTCATTGGGATaGCACAAAAGCAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SRPEKPGSPNRLPSDPLTHCSLG*HKSRPE
Trigger: TTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTG...GGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCTGGGATGTGCTCGTCTaGATTACAGGTTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACWDVLV*ITGFSS
Trigger: GCTGGAAAAACCTGTAATCAAGACGAGCACATCCCA...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427316.6
CDS-3UTR CAA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCTGGGATGTGCTCGTCTaGATTACAGGTTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFWDVLV*ITGFSS
Trigger: GCTGGAAAAACCTGTAATCAAGACGAGCACATCCCA...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS TCA 90 bp TCATTTGAAGGTTGCCGTGGAATGAACACATCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTGTTGTCAACTGTAATCCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SFEGCRGMNTSPLGF*GSVCTLLSTVIPPG
Trigger: TCCAGGAGGGATTACAGTTGACAACAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGATGTGTTCATTCCACGGCAACCTTCAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000514837.1
CDS-3UTR CAA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCAATGTTTGCATCGTGGTaGGCACACAGGCTGACACTG +
Preference number: 5 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPMFASW*AHRLTL
Trigger: CAGTGTCAGCCTGTGTGCCAACCACGATGCAAACAT...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp TGCTACAAGGAGCACCTTGTAATCAGGATGGAGGATGGTATGGCTCACGCATGCATACATTCACCATGTTaGCATCGTGGTTGGCACACA +
Preference number: 5 (lower is better)
Translates to: CYKEHLVIRMEDGMAHACIHSPC*HRGWHT
Trigger: TGTGTGCCAACCACGATGCAAACATGGTGAATGTAT...GCATGCGTGAGCCATACCATCCTCCATCCTGATTACAAGGTGCTCCTTGTAGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACGCACTGGCACCGTATTaGTCCTTTAACAACATCACA +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHALAPY*SFNNIT
Trigger: TGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGC...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCTGGTACCATTTCCCTTaGGTACATGAATTGGACCTG +
Preference number: 5 (lower is better)
Translates to: WKATPTDGFDVSAMPLYFWYHFP*VHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCA...GAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGGCAAACTTGTGGCTaGGTGATCCAGGGGTTGGAA +
Preference number: 5 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKRQTCG*VIQGLE
Trigger: TTCCAACCCCTGGATCACCAAGCCACAAGTTTGCCT...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS-3UTR CAA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGACCCTTGAAGGCAAACTaGTGGCTTGGTGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGPLKAN*WLGDPG
Trigger: CCCTGGATCACCAAGCCACAAGTTTGCCTTCAAGGG...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427316.6
CDS-3UTR CAA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGACTCATTTAGATCCCTaGAAGGCAAACTTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRTHLDP*KANLWL
Trigger: AAGCCACAAGTTTGCCTTCAAGGGATCTAAATGAGT...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427316.6
ENST00000506666.5
CDS TCA 90 bp TTACAACTGTGTACCAGAACACTGAACACATCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTGTTGTCAACTGTAATCCCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LQLCTRTLNTSPLGF*GSVCTLLSTVIPPG
Trigger: TCCAGGAGGGATTACAGTTGACAACAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGATGTGTTCAGTGTTCTGGTACACAGTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACAGGAGAAAATCCATGTaGGGCAGCGGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: IISQGKSILLMVQHRTHNRRKSM*GSGSWG
Trigger: GCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCT...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCGACACTTGCACTTGTTaGGCCCGATACATTCACCAT +
Preference number: 5 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTDTCTC*ARYIHH
Trigger: ATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTC...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGGCACTGGCACCGTATTaGTCCTTTAACAACATCACA +
Preference number: 5 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLALAPY*SFNNIT
Trigger: TGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGC...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp GGAAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: GRQHPQMALMCLRCPCISKSVDT*PKSRAG
Trigger: TCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTT...TGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHKSVDT*PKSRAG
Trigger: TCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTT...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCCTTTGGTACATGAATaGGACCTGAAGGTTCAATCA +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHPLVHE*DLKVQS
Trigger: TGATTGAACCTTCAGGTCCAATTCATGTACCAAAGG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAGGCAACACCCACAGATGGCTTTGATGTGTCTGCGATGCCCCTGTATTTCAAGTGGTACCATTTCCCTTaGGTACATGAATTGGACCTG +
Preference number: 5 (lower is better)
Translates to: KATPTDGFDVSAMPLYFKWYHFP*VHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCA...CTTGAAATACAGGGGCATCGCAGACACATCAAAGCCATCTGTGGGTGTTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGTCTGTCTGTACCCTGTaGTCAACTGTAATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SCSILSAYGEQLVATLSVSVCTL*STVIPP
Trigger: AGGAGGGATTACAGTTGACAACAGGGTACAGACAGA...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp GTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCTCTGTCTGTACCCTGTaGTCAACTGTAATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: VSLFIGIAQKQARKTWVTSVCTL*STVIPP
Trigger: AGGAGGGATTACAGTTGACAACAGGGTACAGACAGA...GGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLSQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATATGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHICSPVT*CLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCA...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGAGCAGCCAAGATAACTaGTCACACACGAAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLSSQDN*SHTKQR
Trigger: TCTCTGCTTCGTGTGTGACAAGTTATCTTGGCTGCT...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CAA 90 bp GAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACTGTTCATTGGGATaGCACAAAAGCAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: EGITVHWDCTKAGQKNLGHCSLG*HKSRPE
Trigger: TTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTG...ACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGTAAATCCCGTTCCAACACATCCCATGCCTCTAAGCATGGGACTTGCTTCCTAGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CKSRSNTSHASKHGTCFLGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...TAGGAAGCAAGTCCCATGCTTAGAGGCATGGGATGTGTTGGAACGGGATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CAA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCCACCCACAGATGGCTTaGATGTGTCTGCGATGCCCC +
Preference number: 5 (lower is better)
Translates to: KSILLMVQHRTHNIIAICHPQMA*MCLRCP
Trigger: GGGGCATCGCAGACACATCAAAGCCATCTGTGGGTG...GCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CTGAATCATACTGATGAGGTGAAGGAAAGGTCTGCCGGTGTGGGGCAGGGCACTAATTTCACAAGCACATaGTACATCATATCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: LNHTDEVKERSAGVGQGTNFTST*YIISQG
Trigger: CCCTTGAGATATGATGTACAATGTGCTTGTGAAATT...AGTGCCCTGCCCCACACCGGCAGACCTTTCCTTCACCTCATCAGTATGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS GCA 90 bp GTTCTGGAATCTCAGACACATGGAGAACTACACCTTGTCTCCAGTTaGTACAAGTCAAGTCCACCTGCATGCAGACAGCTACAATTGTCT +
Preference number: 5 (lower is better)
Translates to: VLESQTHGELHLVSS*YKSSPPACRQLQLS
Trigger: AGACAATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTGTAGCAACTGGAGACAAGGTGTAGTTCTCCATGTGTCTGAGATTCCAGAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CAA 90 bp TCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGTGATACATTCACCATGTTaGCATCGTGGTTGGCACACA +
Preference number: 5 (lower is better)
Translates to: SCSILSAYGEQLVATLSVIHSPC*HRGWHT
Trigger: TGTGTGCCAACCACGATGCAAACATGGTGAATGTAT...CACAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp TTGATGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATACATTCACCATGTTaGCATCGTGGTTGGCACACA +
Preference number: 5 (lower is better)
Translates to: LMCLRCPCISRRVSLFIGIHSPC*HRGWHT
Trigger: TGTGTGCCAACCACGATGCAAACATGGTGAATGTAT...CCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCAGACACTTGCACTTGTTaGGCCCGATACATTCACCAT +
Preference number: 5 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPDTCTC*ARYIHH
Trigger: ATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTC...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGGCACTGGCACCGTATTaGTCCTTTAACAACATCACA +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLALAPY*SFNNIT
Trigger: TGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGC...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAATCTGTCTGTACCCTGTaGTCAACTGTAATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKSVCTL*STVIPP
Trigger: AGGAGGGATTACAGTTGACAACAGGGTACAGACAGA...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGCCAGTTTCCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCATCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: SQFPLVLFLVHMENSWSPSQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...TGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGGAAACTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp GCCAAGATAACTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: AKITCHTRSRENAPDENLSQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...GAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAGTTATCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CAA 90 bp ATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACCAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACC +
Preference number: 5 (lower is better)
Translates to: IISQGKSILLMVQHRTHNQGDLC*PPAMAT
Trigger: GGTGGCCATGGCTGGAGGCAAACACAGATCACCTTG...GTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATACAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACC +
Preference number: 5 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHIQGDLC*PPAMAT
Trigger: GGTGGCCATGGCTGGAGGCAAACACAGATCACCTTG...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACTCTTCTCCTAGGCAACATAGGAGTTCATaGTTAGTTCTGGAGTTGTTA +
Preference number: 5 (lower is better)
Translates to: PGSPNRLPSDPLTHSSPRQHRSS*LVLELL
Trigger: TAACAACTCCAGAACTAACAATGAACTCCTATGTTG...CCTAGGAGAAGAGTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTCACTGTTCATTGGGATaGCACAAAAGCAGGCCAGAA +
Preference number: 5 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPHCSLG*HKSRPE
Trigger: TTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTG...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGGGTATCACTGTTCATaGGGATTGCACAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQGYHCS*GLHKSR
Trigger: CCTGCTTTTGTGCAATCCCAATGAACAGTGATACCC...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS CCA 90 bp TGTTGGCTTAGAAGTAGGCCTGTTGGTAATGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCAAGTACTTCCAACATCAGGAATCCA +
Preference number: 5 (lower is better)
Translates to: CWLRSRPVGNDRRNI*CLRRPPSTSNIRNP
Trigger: TGGATTCCTGATGTTGGAAGTACTTGGTGGCCTCCGAAGACACCATATATTCCTCCTATCATTACCAACAGGCCTACTTCTAAGCCAACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp CAGCACAACATGAGCAACATAAGTTATGAACTACAACTGCCTAAACTTATATCAAGCAGGTCAGGGCACTaGAGCAGGAACCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: QHNMSNISYELQLPKLISSRSGH*SRNHPA
Trigger: TGCCGGATGGTTCCTGCTCAAGTGCCCTGACCTGCT...TGATATAAGTTTAGGCAGTTGTAGTTCATAACTTATGTTGCTCATGTTGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CAA 90 bp TGTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: CVCDAPVFQGGYHCSLGLKSVDT*PKSRAG
Trigger: TCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTT...CAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACCTTTGGTACATGAATaGGACCTGAAGGTTCAATCA +
Preference number: 5 (lower is better)
Translates to: CLRCPCISRRVSLFIGIAPLVHE*DLKVQS
Trigger: TGATTGAACCTTCAGGTCCAATTCATGTACCAAAGG...TGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAATGGTACCATTTCCCTTaGGTACATGAATTGGACCTG +
Preference number: 5 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKWYHFP*VHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCA...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGTTGTTAGTTCTGGAGTaGTTAGCGTTCTTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLLLVLE*LAFFRA
Trigger: TGCTCTGAAGAACGCTAACAACTCCAGAACTAACAA...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp AGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGACCCACCAACATAGGAGTTCATaGTTAGTTCTGGAGTTGTTA +
Preference number: 5 (lower is better)
Translates to: RPEKPGSPNRLPSDPLTHQHRSS*LVLELL
Trigger: TAACAACTCCAGAACTAACAATGAACTCCTATGTTG...GTGGGTCAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS GCA 90 bp TGCACTTGTAGGACCCACGTATGTTATAACATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTGAGCATTCGTCTATGTCATGACATT +
Preference number: 5 (lower is better)
Translates to: CTCRTHVCYNIEQSC*TDTDQVSIRLCHDI
Trigger: AATGTCATGACATAGACGAATGCTCACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTTATAACATACGTGGGTCCTACAAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS GCA 90 bp ATTTGCACTTGTAGGACCCACGTATGTTATAACATCGAGCAAAGCTaGTGCACTGATACTGACCAAGTGAGCATTCGTCTATGTCATGAC +
Preference number: 5 (lower is better)
Translates to: ICTCRTHVCYNIEQS*CTDTDQVSIRLCHD
Trigger: GTCATGACATAGACGAATGCTCACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTTATAACATACGTGGGTCCTACAAGTGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 90 bp TGGTGGAGTAGGAATTGGTGTTGGCTTTGGTGTAGGTCTTGTTGTTaGCTTAGAAGTAGGCCTGTTGGTAATGATAGGAGGAATATATGG +
Preference number: 5 (lower is better)
Translates to: WWSRNWCWLWCRSCC*LRSRPVGNDRRNIW
Trigger: CCATATATTCCTCCTATCATTACCAACAGGCCTACTTCTAAGCCAACAACAAGACCTACACCAAAGCCAACACCAATTCCTACTCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp CCCGTAACTCACTCTCATAATTTGCTACAAGGAGCACCTTGTAATCAGGATGGAATACATTCACCATGTTaGCATCGTGGTTGGCACACA +
Preference number: 5 (lower is better)
Translates to: PVTHSHNLLQGAPCNQDGIHSPC*HRGWHT
Trigger: TGTGTGCCAACCACGATGCAAACATGGTGAATGTAT...TCCATCCTGATTACAAGGTGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTGCACTGGCACCGTATTaGTCCTTTAACAACATCACA +
Preference number: 5 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSALAPY*SFNNIT
Trigger: TGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGC...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp ATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTGGGTCACCAAAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ITVHWDCTKAGQKNLGHQKSVDT*PKSRAG
Trigger: TCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTT...TTGGTGACCCAGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTCCTTTGGTACATGAATaGGACCTGAAGGTTCAATCA +
Preference number: 5 (lower is better)
Translates to: LVTHEAERMHPMKISLNCPLVHE*DLKVQS
Trigger: TGATTGAACCTTCAGGTCCAATTCATGTACCAAAGG...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp CAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCCAGAAAAACCTCCTTTGGTACATGAATaGGACCTGAAGGTTCAATCA +
Preference number: 5 (lower is better)
Translates to: QGGYHCSLGLHKSRPEKPPLVHE*DLKVQS
Trigger: TGATTGAACCTTCAGGTCCAATTCATGTACCAAAGG...AGGTTTTTCTGGCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTTGGTACCATTTCCCTTaGGTACATGAATTGGACCTG +
Preference number: 5 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSWYHFP*VHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCA...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: QGKSILLMVQHRTHNIIASQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCACTTTGTGATTCGCTCTaGATGTCAGCCCCTCGCAAG +
Preference number: 5 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPLCDSL*MSAPRK
Trigger: CTTGCGAGGGGCTGACATCAAGAGCGAATCACAAAG...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305572.12
CDS-3UTR CAA 90 bp CCTCTTGTTCTATTCTTAGTGCATATGGAGAACAGCTGGTCGCCACCCTCTCTGCAACCCTTCATATACTaGAAAACCATCAATGGTTTG +
Preference number: 5 (lower is better)
Translates to: PLVLFLVHMENSWSPPSLQPFIY*KTINGL
Trigger: CAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG...CAGAGAGGGTGGCGACCAGCTGTTCTCCATATGCACTAAGAATAGAACAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAATTGTTAGTTCTGGAGTaGTTAGCGTTCTTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKLLVLE*LAFFRA
Trigger: TGCTCTGAAGAACGCTAACAACTCCAGAACTAACAA...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGTTGTTAGTTCTGGAGTaGTTAGCGTTCTTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQLLVLE*LAFFRA
Trigger: TGCTCTGAAGAACGCTAACAACTCCAGAACTAACAA...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GTGTCTGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCCAACATAGGAGTTCATaGTTAGTTCTGGAGTTGTTA +
Preference number: 5 (lower is better)
Translates to: VSAMPLYFKEGITVHWDCQHRSS*LVLELL
Trigger: TAACAACTCCAGAACTAACAATGAACTCCTATGTTG...GCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGAAGGTTTCCTATCCTTaGCAGAGATCAAACTCAAGG +
Preference number: 5 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQKVSYP*QRSNSR
Trigger: CCTTGAGTTTGATCTCTGCAAAGGATAGGAAACCTT...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CAA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATTGGTGATCCAGGGGTaGGAAAAGAGGCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: VHHISREVNTTHGTTPNTLVIQG*EKRLFT
Trigger: AGTGAACAGCCTCTTTTCCAACCCCTGGATCACCAA...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427316.6
CDS GCA 90 bp TATACACACAAGTCAGTCCATCACCCTGGTATCCTTCTTTACATTTaGACTTGTAGGACCCACGTATGTTATAACATCGAGCAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: YTHKSVHHPGILLYI*TCRTHVCYNIEQSC
Trigger: GCAGCTTTGCTCGATGTTATAACATACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTTGTGTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 90 bp CAGTGCAAGTCATTGTCTTTCTCCCTGATCCATCCACAAAGTCCATaGTCAAAATTACAACTGTGTACCAGAACACTGAACACATCTCCT +
Preference number: 5 (lower is better)
Translates to: QCKSLSFSLIHPQSP*SKLQLCTRTLNTSP
Trigger: AGGAGATGTGTTCAGTGTTCTGGTACACAGTTGTAATTTTGACCATGGACTTTGTGGATGGATCAGGGAGAAAGACAATGACTTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000506666.5
ENST00000514622.5
CDS CCA 90 bp CAGTGCAAGTCATTGTCTTTCTCCCTGATCCATCCACAAAGTCCATaGTCAAAATTACAACTGTGTACCAGAACACCTGGATCATCCTTT +
Preference number: 5 (lower is better)
Translates to: QCKSLSFSLIHPQSP*SKLQLCTRTPGSSF
Trigger: AAAGGATGATCCAGGTGTTCTGGTACACAGTTGTAATTTTGACCATGGACTTTGTGGATGGATCAGGGAGAAAGACAATGACTTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000514837.1
CDS-3UTR CAA 90 bp CAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATAACATCATAGCCGCACTGGCACCGTATTaGTCCTTTAACAACATCACA +
Preference number: 5 (lower is better)
Translates to: QGKSILLMVQHRTHNIIAALAPY*SFNNIT
Trigger: TGTGATGTTGTTAAAGGACAAATACGGTGCCAGTGC...GGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TCTCTGTGCCAACCCTTCATATACTTGAAAACCATCAATGGTTTGCCCCTCAGTAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: SLCQPFIYLKTINGLPLSKSVDT*PKSRAG
Trigger: TCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTT...ACTGAGGGGCAAACCATTGATGGTTTTCAAGTATATGAAGGGTTGGCACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATCTGTCTGTACCCTGTaGTCAACTGTAATCCCTCCT +
Preference number: 5 (lower is better)
Translates to: VHHISREVNTTHGTTPNTSVCTL*STVIPP
Trigger: AGGAGGGATTACAGTTGACAACAGGGTACAGACAGA...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp AAAAGCAGGCCAGAAAAACCTGGGTCACCAAATAGACTTCCTTCTGACCCACTGAATTTCACAAGCACATaGTACATCATATCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: KSRPEKPGSPNRLPSDPLNFTST*YIISQG
Trigger: CCCTTGAGATATGATGTACAATGTGCTTGTGAAATT...CAGTGGGTCAGAAGGAAGTCTATTTGGTGACCCAGGTTTTTCTGGCCTGCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGGCAATTTCACAAGCACATaGTACATCATATCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: PLYFKEGITVHWDCTKAGNFTST*YIISQG
Trigger: CCCTTGAGATATGATGTACAATGTGCTTGTGAAATT...GCCTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CCACAATTGAGTCTAGTTCTGGAATCTCAGACACATGGAGAACTACACCTTGTCGATCTGGAACCACAATaGAGTCTAGTTCTGGAATCT +
Preference number: 5 (lower is better)
Translates to: PQLSLVLESQTHGELHLVDLEPQ*SLVLES
Trigger: AGATTCCAGAACTAGACTCAATTGTGGTTCCAGATC...GACAAGGTGTAGTTCTCCATGTGTCTGAGATTCCAGAACTAGACTCAATTGTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS-3UTR CAA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATGACACTTGCACTTGTTaGGCCCGATACATTCACCAT +
Preference number: 5 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDDTCTC*ARYIHH
Trigger: ATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTC...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: QAHCTSYLKGSQYYSWYNSQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...GTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp ACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACATATCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCAT +
Preference number: 5 (lower is better)
Translates to: TSYLKGSQYYSWYNTEHISQCKS*SFSLIH
Trigger: ATGGATCAGGGAGAAAGACAATGACTTGCACTGGGA...TATGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp CTTGTCACACACGAAGCAGAGAGAATGCACCCGATGAAAATCTCTCTGAACTGTCAACCCTTCATATACTaGAAAACCATCAATGGTTTG +
Preference number: 5 (lower is better)
Translates to: LVTHEAERMHPMKISLNCQPFIY*KTINGL
Trigger: CAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG...ACAGTTCAGAGAGATTTTCATCGGGTGCATTCTCTCTGCTTCGTGTGTGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000504787.1
CDS-3UTR CAA 90 bp TGCGATGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAACAACATAGGAGTTCATaGTTAGTTCTGGAGTTGTTA +
Preference number: 5 (lower is better)
Translates to: CDAPVFQGGYHCSLGLHKQHRSS*LVLELL
Trigger: TAACAACTCCAGAACTAACAATGAACTCCTATGTTG...TTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCATCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp TGCCCCTGTATTTCAAGGAGGGTATCACTGTTCATTGGGATTGCACAAAAGCAGCAACATAGGAGTTCATaGTTAGTTCTGGAGTTGTTA +
Preference number: 5 (lower is better)
Translates to: CPCISRRVSLFIGIAQKQQHRSS*LVLELL
Trigger: TAACAACTCCAGAACTAACAATGAACTCCTATGTTG...CTGCTTTTGTGCAATCCCAATGAACAGTGATACCCTCCTTGAAATACAGGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS-3UTR CAA 90 bp GTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTACAACACCGAACACAAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: VHHISREVNTTHGTTPNTKSVDT*PKSRAG
Trigger: TCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTT...TGTGTTCGGTGTTGTACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TTTCCCCTTTCATCTTCAGCTGTGCAGTTATATGACCATAAAGGAAATGAACCATGGTACCATTTCCCTTaGGTACATGAATTGGACCTG +
Preference number: 5 (lower is better)
Translates to: FPLSSSAVQLYDHKGNEPWYHFP*VHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCA...TGGTTCATTTCCTTTATGGTCATATAACTGCACAGCTGAAGATGAAAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS-3UTR CAA 90 bp CTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTCAAGCTGCCCTTTACCTaGCAACTAGAGTCTGTAAAT +
Preference number: 5 (lower is better)
Translates to: LLMVQHRTHNIIAICKDFKLPFT*QLESVN
Trigger: ATTTACAGACTCTAGTTGCAAGGTAAAGGGCAGCTT...GAAATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS TCA 90 bp AGCATTCGTCTATGTCATGACATTGATATTTGCCTCCAATATACATaGGATCGAAGCCTTTATGACACTTGCAGATGTAGCTCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: SIRLCHDIDICLQYT*DRSLYDTCRCSSQK
Trigger: CTTTTGGGAGCTACATCTGCAAGTGTCATAAAGGCTTCGATCTCATGTATATTGGAGGCAAATATCAATGTCATGACATAGACGAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp CAGCACAACATGAGCAACATAAGTTATGAACTACAACTGCCTAAACTTATATCAGACACTTGCACTTGTTaGGCCCGATACATTCACCAT +
Preference number: 5 (lower is better)
Translates to: QHNMSNISYELQLPKLISDTCTC*ARYIHH
Trigger: ATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTC...TGATATAAGTTTAGGCAGTTGTAGTTCATAACTTATGTTGCTCATGTTGTGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379987.7
CDS-3UTR CAA 90 bp TTTCTTTTAAAAACTGCTCCCGTAACTCACTCTCATAATTTGCTACAAGGAGCATGGTACCATTTCCCTTaGGTACATGAATTGGACCTG +
Preference number: 5 (lower is better)
Translates to: FLLKTAPVTHSHNLLQGAWYHFP*VHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCA...TGCTCCTTGTAGCAAATTATGAGAGTGAGTTACGGGAGCAGTTTTTAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATTTGTTAGTTCTGGAGTaGTTAGCGTTCTTCAGAGCA +
Preference number: 5 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDLLVLE*LAFFRA
Trigger: TGCTCTGAAGAACGCTAACAACTCCAGAACTAACAA...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS-3UTR CAA 90 bp ATACTACTCATGGTACAACACCGAACACATAACATCATAGCCATCTGCAAAGATACTCATTTAGATCCCTaGAAGGCAAACTTGTGGCTT +
Preference number: 5 (lower is better)
Translates to: ILLMVQHRTHNIIAICKDTHLDP*KANLWL
Trigger: AAGCCACAAGTTTGCCTTCAAGGGATCTAAATGAGT...ATCTTTGCAGATGGCTATGATGTTATGTGTTCGGTGTTGTACCATGAGTAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427316.6
CDS-3UTR CAA 90 bp AAGTCAATTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACATACATTCACCATGTTaGCATCGTGGTTGGCACACA +
Preference number: 5 (lower is better)
Translates to: KSISQAHCTSYLKGSQYYIHSPC*HRGWHT
Trigger: TGTGTGCCAACCACGATGCAAACATGGTGAATGTAT...GTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAATTGACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS-3UTR CAA 90 bp TTTCACAAGCACATTGTACATCATATCTCAAGGGAAGTCAATACTACTCATGGTCCTTTGGTACATGAATaGGACCTGAAGGTTCAATCA +
Preference number: 5 (lower is better)
Translates to: FHKHIVHHISREVNTTHGPLVHE*DLKVQS
Trigger: TGATTGAACCTTCAGGTCCAATTCATGTACCAAAGG...ACCATGAGTAGTATTGACTTCCCTTGAGATATGATGTACAATGTGCTTGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000514622.5
CDS TCA 90 bp TTTCCTGTGTCACCCTTTAAAATGGTACCATTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCAATCATAACTTTTGGGATATACACA +
Preference number: 5 (lower is better)
Translates to: FPVSPFKMVPFPFGT*IGPEGSIITFGIYT
Trigger: TGTGTATATCCCAAAAGTTATGATTGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAATGGTACCATTTTAAAGGGTGACACAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS TCA 90 bp TCTTCAACGCTGATCTTACTTTGGAATCTGCATTCCAAGACCACTTaGAGTTACCCAAAGGTACATGATGTTCTTAAACAACCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: SSTLILLWNLHSKTT*SYPKVHDVLKQPEN
Trigger: ATTTTCAGGTTGTTTAAGAACATCATGTACCTTTGGGTAACTTCAAGTGGTCTTGGAATGCAGATTCCAAAGTAAGATCAGCGTTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513430.5
CDS CCA 90 bp CAACATCAGGAATCCAATTATTATTTCCTGTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTACATGAATTGGACCTGAAGGTTCAA +
Preference number: 5 (lower is better)
Translates to: QHQESNYYFLCHPLK*YHFPLVHELDLKVQ
Trigger: TTGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAATGGTACCATTTTAAAGGGTGACACAGGAAATAATAATTGGATTCCTGATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS-3UTR CAA 90 bp TTTATGAAGTATTCTAACAATGGCCCCTGCCAAGAAATGCTCCCTTATACTCTACAACCCTTCATATACTaGAAAACCATCAATGGTTTG +
Preference number: 5 (lower is better)
Translates to: FMKYSNNGPCQEMLPYTLQPFIY*KTINGL
Trigger: CAAACCATTGATGGTTTTCAAGTATATGAAGGGTTG...TAGAGTATAAGGGAGCATTTCTTGGCAGGGGCCATTGTTAGAATACTTCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305572.12
ENST00000379987.7
CDS GCA 72 bp TCTCGAGGAACCCCCAGCCCTCGCCGCCCGGGCTACTaGTGCCGCTCCCGGAGGACAGCGGCGAGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: SRGTPSPRRPGY*CRSRRTAARRA
Trigger: CGCGCGCCTCGCCGCTGTCCTCCGGGAGCGGCAGCAGTAGCCCGGGCGGCGAGGGCTGGGGGTTCCTCGAGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000514622.5
CDS CCA 72 bp GGCGCAGCGCAGTGGCGCGCGAGGAACAGGTTGGGGTaGTGGGCGCCGATGGGAGGCGCCCCTCTGAGAGTC +
Preference number: 6 (lower is better)
Translates to: GAAQWRARNRLG*WAPMGGAPLRV
Trigger: GACTCTCAGAGGGGCGCCTCCCATCGGCGCCCACCACCCCAACCTGTTCCTCGCGCGCCACTGCGCTGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS CCA 72 bp AGCGCCAGGAGAAAATCCATGTTGGGCAGCGGGTCCTaGGGCGCAGCGCAGTGGCGCGCGAGGAACAGGTTG +
Preference number: 6 (lower is better)
Translates to: SARRKSMLGSGS*GAAQWRARNRL
Trigger: CAACCTGTTCCTCGCGCGCCACTGCGCTGCGCCCCAGGACCCGCTGCCCAACATGGATTTTCTCCTGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS CCA 72 bp GCCCCTCGCAAGGTGATCTGTGTTTGCCTCCAGCCATaGCCACCATTTCTTCCCCACAGGGCTGCTCCGTGG +
Preference number: 6 (lower is better)
Translates to: APRKVICVCLQP*PPFLPHRAAPW
Trigger: CCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAACACAGATCACCTTGCGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CCA 72 bp GCTGCTCCGTGGGCACCGTGTTTTCTCACAAACACCTaGAGTGTGCCAGAGTGCAGCCCCGTCACCTTGTGC +
Preference number: 6 (lower is better)
Translates to: AAPWAPCFLTNT*SVPECSPVTLC
Trigger: GCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTGTGAGAAAACACGGTGCCCACGGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS GCA 72 bp ACCTTGTGCCTGAATGACAGGCACAGGTCCCCTGAATaGATGAGGCGGCCGAGAGGTAGCACCAAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: TLCLNDRHRSPE*MRRPRGSTKRA
Trigger: TGCACGCTTGGTGCTACCTCTCGGCCGCCTCATGCATTCAGGGGACCTGTGCCTGTCATTCAGGCACAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS GCA 72 bp ACCTGGAGTGTGCCAGAGTGCAGCCCCGTCACCTTGTaGCTGAATGACAGGCACAGGTCCCCTGAATGCATG +
Preference number: 6 (lower is better)
Translates to: TWSVPECSPVTL*LNDRHRSPECM
Trigger: CATGCATTCAGGGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS GCA 72 bp CCTCCAGCCATGGCCACCATTTCTTCCCCACAGGGCTaGTCCGTGGGCACCGTGTTTTCTCACAAACACCTG +
Preference number: 6 (lower is better)
Translates to: PPAMATISSPQG*SVGTVFSHKHL
Trigger: CAGGTGTTTGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CAA 72 bp AACACCTGGAGTGTGCCAGAGTGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCACAGGTCCCCTGAATGC +
Preference number: 6 (lower is better)
Translates to: NTWSVPECSPVT*CLNDRHRSPEC
Trigger: GCATTCAGGGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CAA 90 bp GAAGACGACGCTCTTGATGTCAGCCCCTCGCAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACCATTTCTTCCCCACAGGGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: EDDALDVSPSQGDLC*PPAMATISSPQGCS
Trigger: GGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTGACATCAAGAGCGTCGTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CAA 90 bp TTTCTCACAAACACCTGGAGTGTGCCAGAGTGCAGCCCCGTCACCTaGTGCCTGAATGACAGGCACAGGTCCCCTGAATGCATGAGGCGG +
Preference number: 6 (lower is better)
Translates to: FLTNTWSVPECSPVT*CLNDRHRSPECMRR
Trigger: CCGCCTCATGCATTCAGGGGACCTGTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTGTGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CCA 72 bp CCATGGCCACCATTTCTTCCCCACAGGGCTGCTCCGTaGGCACCGTGTTTTCTCACAAACACCTGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: PWPPFLPHRAAP*APCFLTNTWSV
Trigger: CACACTCCAGGTGTTTGTGAGAAAACACGGTGCCCACGGAGCAGCCCTGTGGGGAAGAAATGGTGGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS GCA 72 bp CCGTGTTTTCTCACAAACACCTGGAGTGTGCCAGAGTaGAGCCCCGTCACCTTGTGCCTGAATGACAGGCAC +
Preference number: 6 (lower is better)
Translates to: PCFLTNTWSVPE*SPVTLCLNDRH
Trigger: GTGCCTGTCATTCAGGCACAAGGTGACGGGGCTGCACTCTGGCACACTCCAGGTGTTTGTGAGAAAACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CAA 72 bp GCTCTTGATGTCAGCCCCTCGCAAGGTGATCTGTGTTaGCCTCCAGCCATGGCCACCATTTCTTCCCCACAG +
Preference number: 6 (lower is better)
Translates to: ALDVSPSQGDLC*PPAMATISSPQ
Trigger: CTGTGGGGAAGAAATGGTGGCCATGGCTGGAGGCAAACACAGATCACCTTGCGAGGGGCTGACATCAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS GCA 72 bp AACTGTAATCCCTCCTGGAGGTGTACTGGCAGCTGGTaGTATAGTTGTCAGTCCGGTGGTTGGCCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: NCNPSWRCTGSW*YSCQSGGWPFW
Trigger: CCAGAAAGGCCAACCACCGGACTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS GCA 72 bp CTTGGTGATCCAGGGGTTGGAAAAGAGGCTGTTCACTaGCTTGGTCAAGAGGAGCTGGGATGTGCTCGTCTT +
Preference number: 6 (lower is better)
Translates to: LGDPGVGKEAVH*LGQEELGCARL
Trigger: AAGACGAGCACATCCCAGCTCCTCTTGACCAAGGCAGTGAACAGCCTCTTTTCCAACCCCTGGATCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427316.6
ENST00000503451.5
ENST00000506666.5
CDS CCA 72 bp GTCAACTGTAATCCCTCCTGGAGGTGTACTGGCAGCTaGTGCTATAGTTGTCAGTCCGGTGGTTGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: VNCNPSWRCTGS*CYSCQSGGWPF
Trigger: GAAAGGCCAACCACCGGACTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS GCA 72 bp ACTTGCACTTGTTTGGCCCGATACATTCACCATGTTTaGATCGTGGTTGGCACACAGGCTGACACTGTCCCC +
Preference number: 6 (lower is better)
Translates to: TCTCLARYIHHV*IVVGTQADTVP
Trigger: GGGGACAGTGTCAGCCTGTGTGCCAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAGTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000504304.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 72 bp TGTTGGCAGGGGTGGTGGTGGTGGTGGAGTAGGAATTaGTGTTGGCTTTGGTGTAGGTCTTGTTGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: CWQGWWWWWSRN*CWLWCRSCCWL
Trigger: AAGCCAACAACAAGACCTACACCAAAGCCAACACCAATTCCTACTCCACCACCACCACCACCCCTGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CAA 72 bp CCTGCTGGGTCCCTGATTGGTTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCATCCACAAAGTCCATGG +
Preference number: 6 (lower is better)
Translates to: PAGSLIGSQCKS*SFSLIHPQSPW
Trigger: CCATGGACTTTGTGGATGGATCAGGGAGAAAGACAATGACTTGCACTGGGAACCAATCAGGGACCCAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CAA 72 bp GTGATCCAGGGGTTGGAAAAGAGGCTGTTCACTGCCTaGGTCAAGAGGAGCTGGGATGTGCTCGTCTTGATT +
Preference number: 6 (lower is better)
Translates to: VIQGLEKRLFTA*VKRSWDVLVLI
Trigger: AATCAAGACGAGCACATCCCAGCTCCTCTTGACCAAGGCAGTGAACAGCCTCTTTTCCAACCCCTGGATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427316.6
ENST00000503451.5
ENST00000506666.5
CDS CAA 90 bp TGTGGCTTGGTGATCCAGGGGTTGGAAAAGAGGCTGTTCACTGCCTaGGTCAAGAGGAGCTGGGATGTGCTCGTCTTGATTACAGGTTTT +
Preference number: 6 (lower is better)
Translates to: CGLVIQGLEKRLFTA*VKRSWDVLVLITGF
Trigger: AAAACCTGTAATCAAGACGAGCACATCCCAGCTCCTCTTGACCAAGGCAGTGAACAGCCTCTTTTCCAACCCCTGGATCACCAAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427316.6
ENST00000503451.5
ENST00000506666.5
CDS GCA 72 bp GTCAAGTCCACCTGCATGCAGACAGCTACAATTGTCTaGTGGGTCCCTGATTGGTTCCCAGTGCAAGTCATT +
Preference number: 6 (lower is better)
Translates to: VKSTCMQTATIV*WVPDWFPVQVI
Trigger: AATGACTTGCACTGGGAACCAATCAGGGACCCAGCAGACAATTGTAGCTGTCTGCATGCAGGTGGACTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS CCA 72 bp GTCTGTCTGTACCCTGTTGTCAACTGTAATCCCTCCTaGAGGTGTACTGGCAGCTGGTGCTATAGTTGTCAG +
Preference number: 6 (lower is better)
Translates to: VCLYPVVNCNPS*RCTGSWCYSCQ
Trigger: CTGACAACTATAGCACCAGCTGCCAGTACACCTCCAGGAGGGATTACAGTTGACAACAGGGTACAGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CAA 72 bp CACTTGCACTTGTTTGGCCCGATACATTCACCATGTTaGCATCGTGGTTGGCACACAGCTTTGAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: HLHLFGPIHSPC*HRGWHTALSWH
Trigger: GTGCCAGCTCAAAGCTGTGTGCCAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAGTGCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453617.6
ENST00000503451.5
ENST00000506056.5
ENST00000511518.1
ENST00000513430.5
CDS CAA 72 bp TACAAGTCAAGTCCACCTGCATGCAGACAGCTACAATaGTCTGCTGGGTCCCTGATTGGTTCCCAGTGCAAG +
Preference number: 6 (lower is better)
Translates to: YKSSPPACRQLQ*SAGSLIGSQCK
Trigger: CTTGCACTGGGAACCAATCAGGGACCCAGCAGACAATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS CAA 72 bp TCTGCTGGGTCCCTGATTGGTTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCATCCACAAAGTCCATGG +
Preference number: 6 (lower is better)
Translates to: SAGSLIGSQCKS*SFSLIHPQSPW
Trigger: CCATGGACTTTGTGGATGGATCAGGGAGAAAGACAATGACTTGCACTGGGAACCAATCAGGGACCCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514837.1
CDS TCA 72 bp GGTTGCCGTGGAATGAACACATCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTGTTGTCAACTGTAATC +
Preference number: 6 (lower is better)
Translates to: GCRGMNTSPLGF*GSVCTLLSTVI
Trigger: GATTACAGTTGACAACAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGATGTGTTCATTCCACGGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000514837.1
CDS GCA 72 bp CTTGTCTCCAGTTGCTACAAGTCAAGTCCACCTGCATaGAGACAGCTACAATTGTCTGCTGGGTCCCTGATT +
Preference number: 6 (lower is better)
Translates to: LVSSCYKSSPPA*RQLQLSAGSLI
Trigger: AATCAGGGACCCAGCAGACAATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTGTAGCAACTGGAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS CCA 72 bp GGCCACACTCATTTAGATCCCTTGAAGGCAAACTTGTaGCTTGGTGATCCAGGGGTTGGAAAAGAGGCTGTT +
Preference number: 6 (lower is better)
Translates to: GHTHLDPLKANL*LGDPGVGKEAV
Trigger: AACAGCCTCTTTTCCAACCCCTGGATCACCAAGCCACAAGTTTGCCTTCAAGGGATCTAAATGAGTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427316.6
ENST00000503451.5
ENST00000506666.5
CDS CCA 72 bp CTTGTTTGGCCCGATACATTCACCATGTTTGCATCGTaGTTGGCACACAGCTTTGAGCTGGCACCTTATCCT +
Preference number: 6 (lower is better)
Translates to: LVWPDTFTMFAS*LAHSFELAPYP
Trigger: AGGATAAGGTGCCAGCTCAAAGCTGTGTGCCAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000453617.6
ENST00000503451.5
ENST00000506056.5
ENST00000511518.1
ENST00000513430.5
CDS CAA 72 bp TCAGGCCACACTCATTTAGATCCCTTGAAGGCAAACTaGTGGCTTGGTGATCCAGGGGTTGGAAAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: SGHTHLDPLKAN*WLGDPGVGKEA
Trigger: AGCCTCTTTTCCAACCCCTGGATCACCAAGCCACAAGTTTGCCTTCAAGGGATCTAAATGAGTGTGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427316.6
ENST00000503451.5
ENST00000506666.5
CDS TCA 72 bp CACCGTATTTGTCCTTTAACAACATCACAGCCATACTaGCAGTTTGCCATGGAGCAGGTCAGGGCACTTGAG +
Preference number: 6 (lower is better)
Translates to: HRICPLTTSQPY*QFAMEQVRALE
Trigger: CTCAAGTGCCCTGACCTGCTCCATGGCAAACTGTCAGTATGGCTGTGATGTTGTTAAAGGACAAATACGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000504304.5
ENST00000505821.1
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CAA 90 bp GCCTTTATGACACTTGCAGATGTAGCTCCCAAAAGTGTTGACACATaGCCTAAATCTAGGGCAGGAGGCTCTTCCTGTAGCACATTCATC +
Preference number: 6 (lower is better)
Translates to: AFMTLADVAPKSVDT*PKSRAGGSSCSTFI
Trigger: GATGAATGTGCTACAGGAAGAGCCTCCTGCCCTAGATTTAGGCAATGTGTCAACACTTTTGGGAGCTACATCTGCAAGTGTCATAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CAA 90 bp TATTGTCCACCTGCTGGGTCCCTGATTGGTTCCCAGTGCAAGTCATaGTCTTTCTCCCTGATCCATCCACAAAGTCCATGGTCAAAATTA +
Preference number: 6 (lower is better)
Translates to: YCPPAGSLIGSQCKS*SFSLIHPQSPWSKL
Trigger: TAATTTTGACCATGGACTTTGTGGATGGATCAGGGAGAAAGACAATGACTTGCACTGGGAACCAATCAGGGACCCAGCAGGTGGACAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514632.1
CDS CAA 90 bp AGTTCTGGAATCTCAGACACATGGAGAACTACACCTTGTCTCCAGTaGCTACAAGTCAAGTCCACCTGCATGCAGACAGCTACAATTGTC +
Preference number: 6 (lower is better)
Translates to: SSGISDTWRTTPCLQ*LQVKSTCMQTATIV
Trigger: GACAATTGTAGCTGTCTGCATGCAGGTGGACTTGACTTGTAGCAACTGGAGACAAGGTGTAGTTCTCCATGTGTCTGAGATTCCAGAACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS TCA 72 bp TGTACCAGAACACTGAACACATCTCCTCTGGGTTTCTaGGGGTCTGTCTGTACCCTGTTGTCAACTGTAATC +
Preference number: 6 (lower is better)
Translates to: CTRTLNTSPLGF*GSVCTLLSTVI
Trigger: GATTACAGTTGACAACAGGGTACAGACAGACCCTCAGAAACCCAGAGGAGATGTGTTCAGTGTTCTGGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000305572.12
ENST00000506666.5
ENST00000514622.5
CDS GCA 72 bp ACTTGCACTTGTTTGGCCCGATACATTCACCATGTTTaGATCGTGGTTGGCACACAGCTGAATTGTTCCATG +
Preference number: 6 (lower is better)
Translates to: TCTCLARYIHHV*IVVGTQLNCSM
Trigger: CATGGAACAATTCAGCTGTGTGCCAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAGTGCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505821.1
CDS CAA 72 bp CACTTGCACTTGTTTGGCCCGATACATTCACCATGTTaGCATCGTGGTTGGCACACAGCTGAATTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: HLHLFGPIHSPC*HRGWHTAELFH
Trigger: ATGGAACAATTCAGCTGTGTGCCAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAGTGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505821.1
CDS GCA 72 bp AGGACCCACGTATGTTATAACATCGAGCAAAGCTGCTaGACTGATACTGACCAAGTGAGCATTCGTCTATGT +
Preference number: 6 (lower is better)
Translates to: RTHVCYNIEQSC*TDTDQVSIRLC
Trigger: ACATAGACGAATGCTCACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTTATAACATACGTGGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS GCA 72 bp TGTAGGACCCACGTATGTTATAACATCGAGCAAAGCTaGTGCACTGATACTGACCAAGTGAGCATTCGTCTA +
Preference number: 6 (lower is better)
Translates to: CRTHVCYNIEQS*CTDTDQVSIRL
Trigger: TAGACGAATGCTCACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGTTATAACATACGTGGGTCCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 72 bp TTTTCCAGCATAACCAGGATGACACTTGCACTTGTTTaGCCCGATACATTCACCATGTTTGCATCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: FSSITRMTLALV*PDTFTMFASWL
Trigger: CAACCACGATGCAAACATGGTGAATGTATCGGGCCAAACAAGTGCAAGTGTCATCCTGGTTATGCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000504304.5
ENST00000505821.1
ENST00000506056.5
ENST00000506666.5
ENST00000511518.1
ENST00000513430.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 72 bp AGAAGTAGGCCTGTTGGTAATGATAGGAGGAATATATaGTGTCTTCGGAGGCCACCAAGTACTTCCAACATC +
Preference number: 6 (lower is better)
Translates to: RSRPVGNDRRNI*CLRRPPSTSNI
Trigger: GATGTTGGAAGTACTTGGTGGCCTCCGAAGACACCATATATTCCTCCTATCATTACCAACAGGCCTACTTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS TCA 72 bp ACATCGAGCAAAGCTGCTGCACTGATACTGACCAAGTaGGCATTCGTCTATGTCATGACATTGATATTTGCC +
Preference number: 6 (lower is better)
Translates to: TSSKAAALILTK*AFVYVMTLIFA
Trigger: GGCAAATATCAATGTCATGACATAGACGAATGCTCACTTGGTCAGTATCAGTGCAGCAGCTTTGCTCGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CCA 72 bp ACCACAATTGAGTCTAGTTCTGGAATCTCAGACACATaGAGAACTACACCTTGTCTCCAGTTGCTACAAGTC +
Preference number: 6 (lower is better)
Translates to: TTIESSSGISDT*RTTPCLQLLQV
Trigger: GACTTGTAGCAACTGGAGACAAGGTGTAGTTCTCCATGTGTCTGAGATTCCAGAACTAGACTCAATTGTGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505917.1
CDS CAA 72 bp GGTGTAGGTCTTGTTGTTGGCTTAGAAGTAGGCCTGTaGGTAATGATAGGAGGAATATATGGTGTCTTCGGA +
Preference number: 6 (lower is better)
Translates to: GVGLVVGLEVGL*VMIGGIYGVFG
Trigger: TCCGAAGACACCATATATTCCTCCTATCATTACCAACAGGCCTACTTCTAAGCCAACAACAAGACCTACACC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS GCA 72 bp AAGTCAGTCCATCACCCTGGTATCCTTCTTTACATTTaGACTTGTAGGACCCACGTATGTTATAACATCGAG +
Preference number: 6 (lower is better)
Translates to: KSVHHPGILLYI*TCRTHVCYNIE
Trigger: CTCGATGTTATAACATACGTGGGTCCTACAAGTGCAAATGTAAAGAAGGATACCAGGGTGATGGACTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS TCA 72 bp GCATGGCTGTTTGAAAAGGTCAAGATTCTTCAACGCTaGTCTTACTTTGGAATCTGCATTCCAAGACCACTT +
Preference number: 6 (lower is better)
Translates to: AWLFEKVKILQR*SYFGICIPRPL
Trigger: AAGTGGTCTTGGAATGCAGATTCCAAAGTAAGATCAGCGTTGAAGAATCTTGACCTTTTCAAACAGCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513430.5
CDS CAA 90 bp CATGGCTGTTTGAAAAGGTCAAGATTCTTCAACGCTGATCTTACTTaGGAATCTGCATTCCAAGACCACTTGAAGTTACCCAAAGGTACA +
Preference number: 6 (lower is better)
Translates to: HGCLKRSRFFNADLT*ESAFQDHLKLPKGT
Trigger: TGTACCTTTGGGTAACTTCAAGTGGTCTTGGAATGCAGATTCCAAAGTAAGATCAGCGTTGAAGAATCTTGACCTTTTCAAACAGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513430.5
CDS CAA 72 bp TTGAAAAGGTCAAGATTCTTCAACGCTGATCTTACTTaGGAATCTGCATTCCAAGACCACTTGAAGTTACCC +
Preference number: 6 (lower is better)
Translates to: LKRSRFFNADLT*ESAFQDHLKLP
Trigger: GGGTAACTTCAAGTGGTCTTGGAATGCAGATTCCAAAGTAAGATCAGCGTTGAAGAATCTTGACCTTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513430.5
CDS TCA 72 bp CTATGTCATGACATTGATATTTGCCTCCAATATACATaGGATCGAAGCCTTTATGACACTTGCAGATGTAGC +
Preference number: 6 (lower is better)
Translates to: LCHDIDICLQYT*DRSLYDTCRCS
Trigger: GCTACATCTGCAAGTGTCATAAAGGCTTCGATCTCATGTATATTGGAGGCAAATATCAATGTCATGACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS TCA 72 bp TCACCCTTTAAAATGGTACCATTTCCCTTTGGTACATaGATTGGACCTGAAGGTTCAATCATAACTTTTGGG +
Preference number: 6 (lower is better)
Translates to: SPFKMVPFPFGT*IGPEGSIITFG
Trigger: CCCAAAAGTTATGATTGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAATGGTACCATTTTAAAGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS CAA 72 bp AATTGGAAAAAGAGGATAGAGCAACATAGGAGTTCATaGTTAGTTCTGGAGTTGTTAGCGTTCTTCAGAGCA +
Preference number: 6 (lower is better)
Translates to: NWKKRIEQHRSS*LVLELLAFFRA
Trigger: TGCTCTGAAGAACGCTAACAACTCCAGAACTAACAATGAACTCCTATGTTGCTCTATCCTCTTTTTCCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000506666.5
ENST00000514622.5
CDS TCA 72 bp AATGGTACCATTTCCCTTTGGTACATGAATTGGACCTaGAGGTTCAATCATAACTTTTGGGATATACACACA +
Preference number: 6 (lower is better)
Translates to: NGTISLWYMNWT*RFNHNFWDIHT
Trigger: TGTGTGTATATCCCAAAAGTTATGATTGAACCTTCAGGTCCAATTCATGTACCAAAGGGAAATGGTACCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1
CDS TCA 72 bp CTGATCTTACTTTGGAATCTGCATTCCAAGACCACTTaGAGTTACCCAAAGGTACATGATGTTCTTAAACAA +
Preference number: 6 (lower is better)
Translates to: LILLWNLHSKTT*SYPKVHDVLKQ
Trigger: TTGTTTAAGAACATCATGTACCTTTGGGTAACTTCAAGTGGTCTTGGAATGCAGATTCCAAAGTAAGATCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513430.5
CDS CCA 72 bp GAATCCAATTATTATTTCCTGTGTCACCCTTTAAAATaGTACCATTTCCCTTTGGTACATGAATTGGACCTG +
Preference number: 6 (lower is better)
Translates to: ESNYYFLCHPLK*YHFPLVHELDL
Trigger: CAGGTCCAATTCATGTACCAAAGGGAAATGGTACCATTTTAAAGGGTGACACAGGAAATAATAATTGGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000305572.12
ENST00000379987.7
ENST00000427316.6
ENST00000453617.6
ENST00000503451.5
ENST00000506666.5
ENST00000514622.5
ENST00000514837.1