Pregenerated sensors for NPM3 (Homo sapiens)
Ensembl gene IDs: ENSG00000107833Ensembl transcript IDs: ENST00000370110.5, ENST00000462391.5, ENST00000468544.1, ENST00000474993.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCAATTCTCACAGGCAGGTGGGAAGGGAGGCCCCGGGCATGGTaGAAATCAGAAAACCACGGCTGTGTGGAGCACAGGCCCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PPILTGRWEGRPRAW*KSENHGCVEHRPSP Trigger: AGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTTCTGATTTTCACCATGCCCGGGGCCTCCCTTCCCACCTGCCTGTGAGAATTGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR-3UTR CCA 90 bp | CATGGTGAAAATCAGAAAACCACGGCTGTGTGGAGCACAGGCCCTCTCCTAGCAAGGGAACAGGGTGCATaGCGGTGCATGGCACATGGA | + |
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Preference number: 2 (lower is better) Translates to: HGENQKTTAVWSTGPLLAREQGA*RCMAHG Trigger: TCCATGTGCCATGCACCGCCATGCACCCTGTTCCCT...TGCTAGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTTCTGATTTTCACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR-3UTR CCA 90 bp | TGTAGCTCTGAGCTTCAGGCACTAACCTCCAATTCTCACAGGCAGGTGGGAAGGAAAACCACGGCTGTGTaGAGCACAGGCCCTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: CSSELQALTSNSHRQVGRKTTAV*STGPLL Trigger: TAGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTT...CCTTCCCACCTGCCTGTGAGAATTGGAGGTTAGTGCCTGAAGCTCAGAGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR CAA 90 bp | CCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTaGAAACTTGTCAGGGAACAGGGTGCATGGCGGTGCATGGCACAT | + |
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Preference number: 2 (lower is better) Translates to: PPPKLSSSRKKYLQL*KLVREQGAWRCMAH Trigger: ATGTGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR CAA 90 bp | CAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATaGTTGAAACTTGTCAGGGAACAGGGTGCATGGCGGTGCATGGCA | + |
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Preference number: 2 (lower is better) Translates to: QPPPKLSSSRKKYLQ*LKLVREQGAWRCMA Trigger: TGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR-3UTR GCA 90 bp | CCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAACTTCAGGGTGCATGGCGGTaGATGGCACATGGAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: PPPKLSSSRKKYLQLLKLQGAWR*MAHGAD Trigger: GTCAGCTCCATGTGCCATGCACCGCCATGCACCCTG...AAGTTTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR CCA 72 bp | CCCGGGCATGGTGAAAATCAGAAAACCACGGCTGTGTaGAGCACAGGCCCTCTCCTAGCACCAAAGACCCAA | + |
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Preference number: 3 (lower is better) Translates to: PGHGENQKTTAV*STGPLLAPKTQ Trigger: TTGGGTCTTTGGTGCTAGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTTCTGATTTTCACCATGCCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| 3UTR CCA 72 bp | TTACAATTGTTGAAACTTGTCAGGGAACAGGGTGCATaGCGGTGCATGGCACATGGAGCTGACCTAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LQLLKLVREQGA*RCMAHGADLGG Trigger: CCCTCCTAGGTCAGCTCCATGTGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAATTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR TCA 90 bp | TGGAGCACAGGCCCTCTCCTAGCACCAAAGACCCAAGTCCCTCCCACCCAACCCTCTGGTGCCGCCCAGTaGTCCGCACAGGGCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WSTGPLLAPKTQVPPTQPSGAAQ*SAQGQS Trigger: GCTCTGGCCCTGTGCGGATCACTGGGCGGCACCAGA...GGGTTGGGTGGGAGGGACTTGGGTCTTTGGTGCTAGGAGAGGGCCTGTGCTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGCACAGGCCCTCTCCTAGCACCAAAGACCCAAGTCCCTCCCACCCAACCGTGAAGGAGCGGGTGTaGCCGGAGAGCTCACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: VEHRPSPSTKDPSPSHPTVKERV*PESSQP Trigger: CGGCTGTGAGCTCTCCGGCCACACCCGCTCCTTCAC...GGTTGGGTGGGAGGGACTTGGGTCTTTGGTGCTAGGAGAGGGCCTGTGCTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR GCA 90 bp | GAGCTTCAGGCACTAACCTCCAATTCTCACAGGCAGGTGGGAAGGGAGGCCCCGCAGGGTGCATGGCGGTaGATGGCACATGGAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: ELQALTSNSHRQVGREAPQGAWR*MAHGAD Trigger: GTCAGCTCCATGTGCCATGCACCGCCATGCACCCTG...CGGGGCCTCCCTTCCCACCTGCCTGTGAGAATTGGAGGTTAGTGCCTGAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR GCA 90 bp | GTGGAGCACAGGCCCTCTCCTAGCACCAAAGACCCAAGTCCCTCCCACCCAACCTGTCAGGGAACAGGGTaGATGGCGGTGCATGGCACA | + |
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Preference number: 4 (lower is better) Translates to: VEHRPSPSTKDPSPSHPTCQGTG*MAVHGT Trigger: TGTGCCATGCACCGCCATGCACCCTGTTCCCTGACA...GGTTGGGTGGGAGGGACTTGGGTCTTTGGTGCTAGGAGAGGGCCTGTGCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGCACAGGCCCTCTCCTAGCACCAAAGACCCAAGTCCCTCCCACCCAACCAGGGAACAGGGTGCATaGCGGTGCATGGCACATGGA | + |
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Preference number: 4 (lower is better) Translates to: VEHRPSPSTKDPSPSHPTREQGA*RCMAHG Trigger: TCCATGTGCCATGCACCGCCATGCACCCTGTTCCCT...GGTTGGGTGGGAGGGACTTGGGTCTTTGGTGCTAGGAGAGGGCCTGTGCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR TCA 90 bp | GAAAACCACGGCTGTGTGGAGCACAGGCCCTCTCCTAGCACCAAAGACCCAAGTGTTGGCAGGACAGCTTaGGGTTGGCCACAGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: ENHGCVEHRPSPSTKDPSVGRTA*GWPQGL Trigger: CAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAAC...ACTTGGGTCTTTGGTGCTAGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR GCA 90 bp | GCTTCAGGCACTAACCTCCAATTCTCACAGGCAGGTGGGAAGGGAGGCCCCGGGCAGTACCGGCGGCCATaGTGTAAGAGCCTTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ASGTNLQFSQAGGKGGPGQYRRP*CKSLLQ Trigger: TTGAAGAAGGCTCTTACAGCATGGCCGCCGGTACTG...CCCGGGGCCTCCCTTCCCACCTGCCTGTGAGAATTGGAGGTTAGTGCCTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR GCA 90 bp | GCTTCAGGCACTAACCTCCAATTCTCACAGGCAGGTGGGAAGGGAGGCCCCGGGATCGTAACAATCTGGTaGCGCCCAGTGATCCGCACA | + |
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Preference number: 4 (lower is better) Translates to: ASGTNLQFSQAGGKGGPGIVTIW*RPVIRT Trigger: TGTGCGGATCACTGGGCGGCACCAGATTGTTACGAT...CCCGGGGCCTCCCTTCCCACCTGCCTGTGAGAATTGGAGGTTAGTGCCTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CCA 90 bp | GGGCATGGTGAAAATCAGAAAACCACGGCTGTGTGGAGCACAGGCCCTCTCCTACTCATCGTAACAATCTaGTGCCGCCCAGTGATCCGC | + |
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Preference number: 4 (lower is better) Translates to: GHGENQKTTAVWSTGPLLLIVTI*CRPVIR Trigger: GCGGATCACTGGGCGGCACCAGATTGTTACGATGAG...TAGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTTCTGATTTTCACCATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR GCA 90 bp | ATTGTTGAAACTTGTCAGGGAACAGGGTGCATGGCGGTGCATGGCACATGGAGCGTTAGTGCCAGCACGTaGTCCGCATCATCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: IVETCQGTGCMAVHGTWSVSAST*SASSSS Trigger: GGAAGAGGATGATGCGGAGCACGTGCTGGCACTAAC...GCTCCATGTGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR GCA 90 bp | TGTAGCTCTGAGCTTCAGGCACTAACCTCCAATTCTCACAGGCAGGTGGGAAGGGTTGGCCACAGGGACTaGGATCTCCTGATGGTCATG | + |
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Preference number: 4 (lower is better) Translates to: CSSELQALTSNSHRQVGRVGHRD*DLLMVM Trigger: CATGACCATCAGGAGATCGCAGTCCCTGTGGCCAAC...CCTTCCCACCTGCCTGTGAGAATTGGAGGTTAGTGCCTGAAGCTCAGAGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CCA 90 bp | ATTGTTGAAACTTGTCAGGGAACAGGGTGCATGGCGGTGCATGGCACATGGAGCACAGGTGGTTGGAGCTaGAAGTCATCCAGACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: IVETCQGTGCMAVHGTWSTGGWS*KSSRLS Trigger: GCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGT...GCTCCATGTGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR TCA 90 bp | CACCCAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTAGGCCCCGGGCATGGTaGAAATCAGAAAACCACGGC | + |
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Preference number: 4 (lower is better) Translates to: HPTPTQALLFKEEIFTIVRPRAW*KSENHG Trigger: GCCGTGGTTTTCTGATTTTCACCATGCCCGGGGCCT...AACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR TCA 90 bp | CACCCAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTCGCGTTCGGCTCTCCTaGCTCAAAAACGCTAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HPTPTQALLFKEEIFTIVRVRLS*LKNAKA Trigger: TGCCTTAGCGTTTTTGAGTCAGGAGAGCCGAACGCG...AACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CCA 90 bp | TATTTACAATTGTTGAAACTTGTCAGGGAACAGGGTGCATGGCGGTGCATGGCAAGACTGAGCATGGGTTaGCAGGACAGCTTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: YLQLLKLVREQGAWRCMARLSMG*QDSLRL Trigger: CAACCTCAAGCTGTCCTGCCAACCCATGCTCAGTCT...TGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAATTGTAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR TCA 90 bp | CCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAACTTCTTTGGCTCCCTCGGTaGGGCAGAGCATGGTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: PPPKLSSSRKKYLQLLKLLWLPR*GRAWLV Trigger: CACTAACCATGCTCTGCCTCACCGAGGGAGCCAAAG...AAGTTTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CCA 90 bp | CCAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAAAAACCACGGCTGTGTaGAGCACAGGCCCTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: PTPTQALLFKEEIFTIVEKTTAV*STGPLL Trigger: TAGGAGAGGGCCTGTGCTCCACACAGCCGTGGTTTT...TTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS CCA 90 bp | CGCACAGGGCCAGAGCCCGACTTCAGGCGGAAGGTTACAGGTGGTTaGAGCTGGAAGTCATCCAGACTGAGCATGGGTTGGCAGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: RTGPEPDFRRKVTGG*SWKSSRLSMGWQDS Trigger: GCTGTCCTGCCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCTGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS CCA 90 bp | GATCCGCACAGGGCCAGAGCCCGACTTCAGGCGGAAGGTTACAGGTaGTTGGAGCTGGAAGTCATCCAGACTGAGCATGGGTTGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: DPHRARARLQAEGYR*LELEVIQTEHGLAG Trigger: TCCTGCCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCTGTGCGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS GCA 90 bp | ACTGAGCATGGGTTGGCAGGACAGCTTGAGGTTGGCCACAGGGACTaGGATCTCCTGATGGTCATGGTTCCGGGCCACAACTTCTACCAC | + |
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Preference number: 5 (lower is better) Translates to: TEHGLAGQLEVGHRD*DLLMVMVPGHNFYH Trigger: GTGGTAGAAGTTGTGGCCCGGAACCATGACCATCAGGAGATCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACCCATGCTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS-3UTR CAA 90 bp | GCTTCAGGCACTAACCTCCAATTCTCACAGGCAGGTGGGAAGGGAGGCCCCGGGTCCTCAGAAACATCATaGCTCATCGTAACAATCTGG | + |
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Preference number: 5 (lower is better) Translates to: ASGTNLQFSQAGGKGGPGSSETS*LIVTIW Trigger: CCAGATTGTTACGATGAGCAATGATGTTTCTGAGGA...CCCGGGGCCTCCCTTCCCACCTGCCTGTGAGAATTGGAGGTTAGTGCCTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CAA 90 bp | CCACCCAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTCAGGACAGCTTGAGGTaGGCCACAGGGACTGCGATC | + |
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Preference number: 5 (lower is better) Translates to: PPNPHPSSPLQGRNIYNCQDSLR*ATGTAI Trigger: GATCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTG...ACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS CCA 90 bp | AAGAAATATTTACAATTGTTGAAACTTGTCAGGGAACAGGGTGCATaGCGGTGCATGGCACATGGAGCTGACCTAGGAGGGCTAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: KKYLQLLKLVREQGA*RCMAHGADLGGLGP Trigger: AGGCCCTAGCCCTCCTAGGTCAGCTCCATGTGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAATTGTAAATATTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370110.5 ENST00000474993.5 |
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| CDS-3UTR CAA 90 bp | CCAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAGGTTGGCAGGACAGCTaGAGGTTGGCCACAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: PTPTQALLFKEEIFTIVEGWQDS*RLATGT Trigger: AGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACC...TTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CAA 90 bp | CACCCAACCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAGGTTACAGGTGGTaGGAGCTGGAAGTCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: HPTPTQALLFKEEIFTIVEGYRW*ELEVIQ Trigger: CTGGATGACTTCCAGCTCCAACCACCTGTAACCTTC...AACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGGTTGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CAA 90 bp | CCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAACTTACATTACACTCGTCTTaGGCTCCCTCGGTGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PPPKLSSSRKKYLQLLKLTLHSS*APSVRQ Trigger: CTGCCTCACCGAGGGAGCCAAAGACGAGTGTAATGT...AAGTTTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS-3UTR CAA 90 bp | CCCCCACCCAAGCTCTCCTCTTCAAGGAAGAAATATTTACAATTGTTGAAACTTCAGACTGAGCATGGGTaGGCAGGACAGCTTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: PPPKLSSSRKKYLQLLKLQTEHG*AGQLEV Trigger: AACCTCAAGCTGTCCTGCCAACCCATGCTCAGTCTG...AAGTTTCAACAATTGTAAATATTTCTTCCTTGAAGAGGAGAGCTTGGGTGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370110.5 |
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| CDS CAA 90 bp | CCGCACAGGGCCAGAGCCCGACTTCAGGCGGAAGGTTACAGGTGGTaGGAGCTGGAAGTCATCCAGACTGAGCATGGGTTGGCAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: PHRARARLQAEGYRW*ELEVIQTEHGLAGQ Trigger: CTGTCCTGCCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCTGTGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS GCA 72 bp | GGGTTGGCAGGACAGCTTGAGGTTGGCCACAGGGACTaGGATCTCCTGATGGTCATGGTTCCGGGCCACAAC | + |
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Preference number: 6 (lower is better) Translates to: GLAGQLEVGHRD*DLLMVMVPGHN Trigger: GTTGTGGCCCGGAACCATGACCATCAGGAGATCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370110.5 ENST00000462391.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS CCA 72 bp | AGGGCCAGAGCCCGACTTCAGGCGGAAGGTTACAGGTaGTTGGAGCTGGAAGTCATCCAGACTGAGCATGGG | + |
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Preference number: 6 (lower is better) Translates to: RARARLQAEGYR*LELEVIQTEHG Trigger: CCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS CCA 72 bp | CCCGACTTCAGGCGGAAGGTTACAGGTGGTTGGAGCTaGAAGTCATCCAGACTGAGCATGGGTTGGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PDFRRKVTGGWS*KSSRLSMGWQD Trigger: GTCCTGCCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS CCA 72 bp | CCAGAGCCCGACTTCAGGCGGAAGGTTACAGGTGGTTaGAGCTGGAAGTCATCCAGACTGAGCATGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PEPDFRRKVTGG*SWKSSRLSMGW Trigger: CCAACCCATGCTCAGTCTGGATGACTTCCAGCTCCAACCACCTGTAACCTTCCGCCTGAAGTCGGGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000370110.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS TCA 72 bp | GACAGCTTGAGGTTGGCCACAGGGACTGCGATCTCCTaGTGGTCATGGTTCCGGGCCACAACTTCTACCACA | + |
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Preference number: 6 (lower is better) Translates to: DSLRLATGTAIS*WSWFRATTSTT Trigger: TGTGGTAGAAGTTGTGGCCCGGAACCATGACCATCAGGAGATCGCAGTCCCTGTGGCCAACCTCAAGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000370110.5 ENST00000462391.5 ENST00000468544.1 ENST00000474993.5 |
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| CDS GCA 72 bp | TTGTTGAAACTTGTCAGGGAACAGGGTGCATGGCGGTaGATGGCACATGGAGCTGACCTAGGAGGGCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: LLKLVREQGAWR*MAHGADLGGLG Trigger: CCCTAGCCCTCCTAGGTCAGCTCCATGTGCCATGCACCGCCATGCACCCTGTTCCCTGACAAGTTTCAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370110.5 ENST00000474993.5 |
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| CDS TCA 72 bp | TCATTGCTCATCGTAACATGGGTTGGCAGGACAGCTTaGGGTTGGCCACAGGGACTGCGATCTCCTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SLLIVTWVGRTA*GWPQGLRSPDG Trigger: ACCATCAGGAGATCGCAGTCCCTGTGGCCAACCTCAAGCTGTCCTGCCAACCCATGTTACGATGAGCAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462391.5 |
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