Pregenerated sensors for NPM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000181163Ensembl transcript IDs: ENST00000393820.2, ENST00000519955.1, ENST00000521710.2, ENST00000676504.1, ENST00000676613.1, ENST00000676625.1, ENST00000677297.1, ENST00000677325.1, ENST00000677672.1, ENST00000677682.1, ENST00000677741.1, ENST00000678186.1, ENST00000678267.1, ENST00000678280.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCAAGACAATCAAACCAGACTAAGAATGGATAGAAGTGGGAGATaGAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACATTCCC | + |
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Preference number: 1 (lower is better) Translates to: IQDNQTRLRMDRSGR*KSPKENGTELENIP Trigger: GGGAATGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTATCCATTCTTAGTCTGGTTTGATTGTCTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR CCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTaGAGAACATTCCCTCACCTACTCAAACTACTGGAGTATAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: IEVGDENLPRKTAQN*RTFPHLLKLLEYKA Trigger: TGCTTTATACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR CCA 90 bp | ATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATaGCTAGTATCTCTATTCAAACAGATTTGCCAAAGGGTCAAATCT | + |
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Preference number: 1 (lower is better) Translates to: ILRIFFRARKPYWAA*LVSLFKQICQRVKS Trigger: AGATTTGACCCTTTGGCAAATCTGTTTGAATAGAGATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR CCA 90 bp | AAGTCGGTTATCACCCAGAACCAAATACAACCCATAACATCCCTTTaGAGAACCATGTCAAGTGACCCAAACTGTTCTTTAAAAACAAAC | + |
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Preference number: 1 (lower is better) Translates to: KSVITQNQIQPITSL*RTMSSDPNCSLKTN Trigger: GTTTGTTTTTAAAGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGATAACCGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | AAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTATAGGTGGGCAGATCACTTaGGCTCAGGAGTTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: KRHRTGEHSLTYSNYWSIGGQIT*AQEFET Trigger: GGTCTCGAACTCCTGAGCTCAAGTGATCTGCCCACC...TATACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR-3UTR TCA 90 bp | AAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTACCATCGAACTCCAGTaGCAGAAGATAAAGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: KNTPYLFQGQKALLGSMATIELQ*QKIKNH Trigger: GTGGTTCTTTATCTTCTGTCACTGGAGTTCGATGGT...AGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | ACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTAGTATCGGTTCAGAACAACAATaGTCTGGTCATCAGTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: TPYLFQGQKALLGSMASIGSEQQ*SGHQLK Trigger: CTTTAACTGATGACCAGATCATTGTTGTTCTGAACC...GATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTAAAAACCATACAGGTTaGAAGGCTGCTTTTAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSKNHTG*KAAFKL Trigger: CAGCTTAAAAGCAGCCTTTCAACCTGTATGGTTTTT...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR-3UTR CCA 90 bp | AAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTATAACTATCATCAGGAGGTaGGAACACAGCACTAAATCC | + |
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Preference number: 2 (lower is better) Translates to: KRHRTGEHSLTYSNYWSITIIRR*EHSTKS Trigger: GGATTTAGTGCTGTGTTCCCACCTCCTGATGATAGT...TATACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR CAA 90 bp | AAAGCCCTATTGGGCAGCATGGCTAGTATCTCTATTCAAACAGATTaGCCAAAGGGTCAAATCTTCCCTGACAACCTCTCTAGGAACATA | + |
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Preference number: 2 (lower is better) Translates to: KALLGSMASISIQTD*PKGQIFPDNLSRNI Trigger: TATGTTCCTAGAGAGGTTGTCAGGGAAGATTTGACCCTTTGGCAAATCTGTTTGAATAGAGATACTAGCCATGCTGCCCAATAGGGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR CAA 90 bp | CTTTCCAAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATaGGGCAGCATGGCTAGTATCTCTATTCAAACAGATTTGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSKNTPYLFQGQKAL*GSMASISIQTDLPK Trigger: CTTTGGCAAATCTGTTTGAATAGAGATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTTGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTGTGCTAATTAGTCTCTaGATATCCTCATTATCTACG | + |
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Preference number: 2 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSVLISL*ISSLST Trigger: CGTAGATAATGAGGATATTCAGAGACTAATTAGCAC...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR-3UTR TCA 90 bp | ATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACTGTTCTCCACAAAACACTTGCTaGCCACAAACTGGTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: IQPITSLWRTMSSDPNCSPQNTC*PQTGSE Trigger: TTCTGAACCAGTTTGTGGTCAGCAAGTGTTTTGTGG...AGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCCAAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGTTCGACAAACAAACATaGCAACTCGGTTGCTTATCT | + |
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Preference number: 2 (lower is better) Translates to: TFQEYSVSFSGPESPIGQFDKQT*QLGCLS Trigger: AGATAAGCAACCGAGTTGCCATGTTTGTTTGTCGAA...CTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTTGGAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | TCTAACAAGTCGGTTATCACCCAGAACCAAATACAACCCATAACATCCCTTTGGCTTGGCACAACTAAATaGCACCAAACCTACCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SNKSVITQNQIQPITSLWLGTTK*HQTYLK Trigger: TTTAAGGTAGGTTTGGTGTCATTTAGTTGTGCCAAG...CCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGATAACCGACTTGTTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTAATCACTCTCACCATTTCCTTCAAATTACGGATATAGGCAAGAAACTACCCATGTTCAAGAGTTaGCCATCGAACTCCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: FSNHSHHFLQITDIGKKLPMFKS*PSNSSD Trigger: GTCACTGGAGTTCGATGGTCAACTCTTGAACATGGG...TAGTTTCTTGCCTATATCCGTAATTTGAAGGAAATGGTGAGAGTGATTAGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678267.1 |
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| 3UTR-3UTR CCA 90 bp | ATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACTGTTCTTTGCTGACCACAAACTaGTTCAGAACAACAATGATC | + |
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Preference number: 2 (lower is better) Translates to: IQPITSLWRTMSSDPNCSLLTTN*FRTTMI Trigger: GATCATTGTTGTTCTGAACCAGTTTGTGGTCAGCAA...AGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | ATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACTGTTCTTATTGGCAAGACCTGTaGCTTTGTAACCAAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: IQPITSLWRTMSSDPNCSYWQDL*LCNQNF Trigger: GAAATTTTGGTTACAAAGTCACAGGTCTTGCCAATA...AGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTTCAAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTATTGGCAAGACCTGTaGCTTTGTAACCAAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: RFSNVQGTLAESGIALRNYWQDL*LCNQNF Trigger: GAAATTTTGGTTACAAAGTCACAGGTCTTGCCAATA...GTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTTGAAAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000393820.2 ENST00000676613.1 ENST00000678267.1 ENST00000678280.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTAATCACTCTCACCATTTCCTTCAAATTACGGATATAGGCAAGAAACTATATTGGCAAGACCTGTaGCTTTGTAACCAAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: FSNHSHHFLQITDIGKKLYWQDL*LCNQNF Trigger: GAAATTTTGGTTACAAAGTCACAGGTCTTGCCAATA...TAGTTTCTTGCCTATATCCGTAATTTGAAGGAAATGGTGAGAGTGATTAGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000393820.2 ENST00000676613.1 ENST00000678267.1 ENST00000678280.1 |
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| 3UTR CCA 72 bp | GGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTaGAGAACATTCCCTCACCTACTCAAACTACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GDENLPRKTAQN*RTFPHLLKLLE Trigger: CTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR-3UTR CAA 90 bp | AACCAAATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACAATGTCCAAGGGACTTaGGCAGAATCAGGTATAGCA | + |
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Preference number: 3 (lower is better) Translates to: NQIQPITSLWRTMSSDPNNVQGT*AESGIA Trigger: TGCTATACCTGATTCTGCCAAAGTCCCTTGGACATT...GTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR CAA 90 bp | TCTAACAAGTCGGTTATCACCCAGAACCAAATACAACCCATAACATCCCTTTGGTTTCTTGAAGGATTCTaGTCCTTTCTTCACTGGCGC | + |
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Preference number: 3 (lower is better) Translates to: SNKSVITQNQIQPITSLWFLEGF*SFLHWR Trigger: GCGCCAGTGAAGAAAGGACAAGAATCCTTCAAGAAA...CCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGATAACCGACTTGTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR CAA 90 bp | TCCTCAATAATCTGCATGCTACTACATGGATCAGTTTATTCTTTTTCCCTTCAAGGCCAGAAAGCCCTATaGGGCAGCATGGCTAGTATC | + |
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Preference number: 3 (lower is better) Translates to: SSIICMLLHGSVYSFSLQGQKAL*GSMASI Trigger: GATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCC...TTGAAGGGAAAAAGAATAAACTGATCCATGTAGTAGCATGCAGATTATTGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR TCA 72 bp | AATCAAACCAGACTAAGAATGGATAGAAGTGGGAGATaGAAATCTCCCAAGGAAAACGGCACAGAACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: NQTRLRMDRSGR*KSPKENGTELE Trigger: CTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTATCCATTCTTAGTCTGGTTTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR CCA 72 bp | ATCACCCAGAACCAAATACAACCCATAACATCCCTTTaGAGAACCATGTCAAGTGACCCAAACTGTTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: ITQNQIQPITSL*RTMSSDPNCSL Trigger: TAAAGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR CAA 90 bp | AAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTATAGGTCTAATGGAACATTaGGAAACATGTTGCATAGTT | + |
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Preference number: 3 (lower is better) Translates to: KRHRTGEHSLTYSNYWSIGLMEH*ETCCIV Trigger: AACTATGCAACATGTTTCCAAATGTTCCATTAGACC...TATACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR-3UTR CAA 90 bp | TCCTCAATAATCTGCATGCTACTACATGGATCAGTTTATTCTTTTTCCCTTCAAAATGTCCAAGGGACTTaGGCAGAATCAGGTATAGCA | + |
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Preference number: 3 (lower is better) Translates to: SSIICMLLHGSVYSFSLQNVQGT*AESGIA Trigger: TGCTATACCTGATTCTGCCAAAGTCCCTTGGACATT...TTGAAGGGAAAAAGAATAAACTGATCCATGTAGTAGCATGCAGATTATTGAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| 3UTR-3UTR CAA 90 bp | GACAACCTCTCTAGGAACATAAAATATAAGCTACACTTGAGATTCGACAAACAACCACTTTCTATCTCCTaGGCACAACTAAATGACACC | + |
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Preference number: 3 (lower is better) Translates to: DNLSRNIKYKLHLRFDKQPLSIS*AQLNDT Trigger: GGTGTCATTTAGTTGTGCCAAGGAGATAGAAAGTGG...TTGTTTGTCGAATCTCAAGTGTAGCTTATATTTTATGTTCCTAGAGAGGTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678267.1 |
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| 3UTR GCA 72 bp | CCGAGAGAGATACCTTTAGAAAATTCCTCAATAATCTaGATGCTACTACATGGATCAGTTTATTCTTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: PREIPLENSSII*MLLHGSVYSFS Trigger: GGAAAAAGAATAAACTGATCCATGTAGTAGCATGCAGATTATTGAGGAATTTTCTAAAGGTATCTCTCTCGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS-3UTR CCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTGAGCCACAGCATCCCTaGCTCACGAGTGGCAACACG | + |
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Preference number: 4 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSEPQHP*LTSGNT Trigger: CGTGTTGCCACTCGTGAGCCAGGGATGCTGTGGCTC...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR TCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTGGTGGGCAGATCACTTaGGCTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSGGQIT*AQEFET Trigger: GGTCTCGAACTCCTGAGCTCAAGTGATCTGCCCACC...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR CCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACATCCCTGGCTCACGAGTaGCAACACGCCGGTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: IEVGDENLPRKTAQNWRTSLAHE*QHAGES Trigger: GGACTCACCGGCGTGTTGCCACTCGTGAGCCAGGGA...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR TCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTAGTTCACAACCGCAGTaGGACAGAAAAGGGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSSSQPQ*DRKGAQ Trigger: TTGAGCCCCTTTTCTGTCTCACTGCGGTTGTGAACT...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR TCA 90 bp | AATAGGCAGATAGGAGGTCTAATGGAACATTTGGAAACATGTTGCATAGTTATAGTGGCAACACGCCGGTaGGTCCCGGATGTAGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: NRQIGGLMEHLETCCIVIVATRR*VPDVAP Trigger: GGGCGCTACATCCGGGACTCACCGGCGTGTTGCCAC...TATAACTATGCAACATGTTTCCAAATGTTCCATTAGACCTCCTATCTGCCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR GCA 90 bp | AAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTATACTGAGGCAGGAGACCTaGTTGAACCCAAGAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KRHRTGEHSLTYSNYWSILRQET*LNPRSR Trigger: TCTGCTTCTTGGGTTCAAGCAGGTCTCCTGCCTCAG...TATACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR CCA 90 bp | ACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTAGTATCCCCATAACATCCCTTTaGAGAACCATGTCAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TPYLFQGQKALLGSMASIPITSL*RTMSSD Trigger: GTCACTTGACATGGTTCTCCAAAGGGATGTTATGGG...GATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS-3UTR TCA 90 bp | GTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCCTCCCCCATGTTCAAGAGTTaGCCATCGAACTCCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VQGTLAESGIALRNLTASPMFKS*PSNSSD Trigger: GTCACTGGAGTTCGATGGTCAACTCTTGAACATGGG...GGAGGCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678267.1 |
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| CDS-3UTR GCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTCCAAGAAGCAGAAGCTaGAATAAGCTGAGATTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSPRSRS*NKLRLC Trigger: GCACAATCTCAGCTTATTGCAGCTTCTGCTTCTTGG...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR CCA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTACTATCATCAGGAGGTaGGAACACAGCACTAAATCC | + |
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Preference number: 4 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSTIIRR*EHSTKS Trigger: GGATTTAGTGCTGTGTTCCCACCTCCTGATGATAGT...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR CCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACATTTAGGAAGCCGAGGTaGGCAGATCACTTGAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IEVGDENLPRKTAQNWRTFRKPR*ADHLSS Trigger: TGAGCTCAAGTGATCTGCCCACCTCGGCTTCCTAAA...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| CDS-3UTR CCA 90 bp | ATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACTGTTCTGCCAGAAAGCCCTATTaGGCAGCATGGCTAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: IQPITSLWRTMSSDPNCSARKPY*AAWLVS Trigger: AGATACTAGCCATGCTGCCCAATAGGGCTTTCTGGC...AGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS-3UTR CCA 90 bp | GTCGGTTATCACCCAGAACCAAATACAACCCATAACATCCCTTTGGAGAACCATCCCATAACATCCCTTTaGAGAACCATGTCAAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: VGYHPEPNTTHNIPLENHPITSL*RTMSSD Trigger: GTCACTTGACATGGTTCTCCAAAGGGATGTTATGGG...ATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGATAACCGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS-3UTR CCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACAAAAACGGCACAGAACTaGAGAACATTCCCTCACCTA | + |
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Preference number: 4 (lower is better) Translates to: IEVGDENLPRKTAQNWRTKTAQN*RTFPHL Trigger: TAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTT...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000677325.1 |
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| 3UTR CAA 72 bp | TTGGGCAGCATGGCTAGTATCTCTATTCAAACAGATTaGCCAAAGGGTCAAATCTTCCCTGACAACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSMASISIQTD*PKGQIFPDNLS Trigger: AGAGAGGTTGTCAGGGAAGATTTGACCCTTTGGCAAATCTGTTTGAATAGAGATACTAGCCATGCTGCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | AAAACACTTGCTGACCACAAACTGGTTCAGAACAACAATGATCTGGTCATCAGTCTTATATATAGACCCTaGAGATCTCGCGAGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTLADHKLVQNNNDLVISLIYRP*RSRERF Trigger: GAAGCGCTCGCGAGATCTTCAGGGTCTATATATAAG...ACTGATGACCAGATCATTGTTGTTCTGAACCAGTTTGTGGTCAGCAAGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | GTCGGTTATCACCCAGAACCAAATACAACCCATAACATCCCTTTGGAGAACCATCCCTATTGGGCAGCATaGCTAGTATCTCTATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGYHPEPNTTHNIPLENHPYWAA*LVSLFK Trigger: TTTGAATAGAGATACTAGCCATGCTGCCCAATAGGG...ATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGATAACCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTCAAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACGCCAGAAAGCCCTATTaGGCAGCATGGCTAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RFSNVQGTLAESGIALRNARKPY*AAWLVS Trigger: AGATACTAGCCATGCTGCCCAATAGGGCTTTCTGGC...GTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTTGAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| 3UTR CAA 72 bp | AATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATaGGGCAGCATGGCTAGTATCTCTATTCAAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTPYLFQGQKAL*GSMASISIQTD Trigger: ATCTGTTTGAATAGAGATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | GTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCCTCCCTTGGCACAACTAAATaGCACCAAACCTACCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQGTLAESGIALRNLTASLGTTK*HQTYLK Trigger: TTTAAGGTAGGTTTGGTGTCATTTAGTTGTGCCAAG...GGAGGCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACAAAAAACCATACAGGTTaGAAGGCTGCTTTTAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IEVGDENLPRKTAQNWRTKNHTG*KAAFKL Trigger: CAGCTTAAAAGCAGCCTTTCAACCTGTATGGTTTTT...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR GCA 90 bp | AAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTAATTCCTCAATAATCTaGATGCTACTACATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: KNTPYLFQGQKALLGSMANSSII*MLLHGS Trigger: TGATCCATGTAGTAGCATGCAGATTATTGAGGAATT...AGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | AACCAAATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACCCCTATTGGGCAGCATaGCTAGTATCTCTATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQIQPITSLWRTMSSDPNPYWAA*LVSLFK Trigger: TTTGAATAGAGATACTAGCCATGCTGCCCAATAGGG...GTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCCTCCTTCGACAAACAAACATaGCAACTCGGTTGCTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: VQGTLAESGIALRNLTASFDKQT*QLGCLS Trigger: AGATAAGCAACCGAGTTGCCATGTTTGTTTGTCGAA...GGAGGCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | AGGTTTTCAAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACACCATCGAACTCCAGTaGCAGAAGATAAAGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RFSNVQGTLAESGIALRNTIELQ*QKIKNH Trigger: GTGGTTCTTTATCTTCTGTCACTGGAGTTCGATGGT...GTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTTGAAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | ATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACTGTTCTGGTTCAGAACAACAATaGTCTGGTCATCAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IQPITSLWRTMSSDPNCSGSEQQ*SGHQLK Trigger: CTTTAACTGATGACCAGATCATTGTTGTTCTGAACC...AGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | AATAGGCAGATAGGAGGTCTAATGGAACATTTGGAAACATGTTGCATAGTTATAATAAGGAATCCAGGTTaGGGTCAGGTGCAGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NRQIGGLMEHLETCCIVIIRNPG*GQVQLL Trigger: GAGCAACTGCACCTGACCTCAACCTGGATTCCTTAT...TATAACTATGCAACATGTTTCCAAATGTTCCATTAGACCTCCTATCTGCCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR TCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACAGTGCTAATTAGTCTCTaGATATCCTCATTATCTACG | + |
|
Preference number: 4 (lower is better) Translates to: IEVGDENLPRKTAQNWRTVLISL*ISSLST Trigger: CGTAGATAATGAGGATATTCAGAGACTAATTAGCAC...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR TCA 90 bp | AAGACAAAAGCATTATTACAGGTAAGTAGAGAAATACACCGAGAGAGATACCTTCTTATATATAGACCCTaGAGATCTCGCGAGCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTKALLQVSREIHRERYLLIYRP*RSRERF Trigger: GAAGCGCTCGCGAGATCTTCAGGGTCTATATATAAG...AAGGTATCTCTCTCGGTGTATTTCTCTACTTACCTGTAATAATGCTTTTGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | AATAGGCAGATAGGAGGTCTAATGGAACATTTGGAAACATGTTGCATAGTTATAACATGCTGTAAGCACTaGACAAAGACCTCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: NRQIGGLMEHLETCCIVITCCKH*TKTSRT Trigger: GGTTCTGGAGGTCTTTGTTCAGTGCTTACAGCATGT...TATAACTATGCAACATGTTTCCAAATGTTCCATTAGACCTCCTATCTGCCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR GCA 90 bp | GTCGGTTATCACCCAGAACCAAATACAACCCATAACATCCCTTTGGAGAACCATAATTCCTCAATAATCTaGATGCTACTACATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VGYHPEPNTTHNIPLENHNSSII*MLLHGS Trigger: TGATCCATGTAGTAGCATGCAGATTATTGAGGAATT...ATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTTCTGGGTGATAACCGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR GCA 90 bp | ATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACTGTTCTCTATTCAAACAGATTTaGCAAAGGGTCAAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQPITSLWRTMSSDPNCSLFKQI*QRVKSS Trigger: GGAAGATTTGACCCTTTGGCAAATCTGTTTGAATAG...AGAACAGTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACAACCTACTCAAACTACTaGAGTATAAAGCACAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEVGDENLPRKTAQNWRTTYSNY*SIKHNK Trigger: TTTGTTGTGCTTTATACTCCAGTAGTTTGAGTAGGT...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR TCA 90 bp | AGGTTTTCAAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACGGTTCAGAACAACAATaGTCTGGTCATCAGTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFSNVQGTLAESGIALRNGSEQQ*SGHQLK Trigger: CTTTAACTGATGACCAGATCATTGTTGTTCTGAACC...GTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTTGAAAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | AAGACAAAAGCATTATTACAGGTAAGTAGAGAAATACACCGAGAGAGATACCTTCCACAAAACACTTGCTaGCCACAAACTGGTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTKALLQVSREIHRERYLPQNTC*PQTGSE Trigger: TTCTGAACCAGTTTGTGGTCAGCAAGTGTTTTGTGG...AAGGTATCTCTCTCGGTGTATTTCTCTACTTACCTGTAATAATGCTTTTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| 3UTR CAA 72 bp | CCAGTGACAGAAGATAAAGAACCACTTTCTATCTCCTaGGCACAACTAAATGACACCAAACCTACCTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVTEDKEPLSIS*AQLNDTKPTLK Trigger: TTTTAAGGTAGGTTTGGTGTCATTTAGTTGTGCCAAGGAGATAGAAAGTGGTTCTTTATCTTCTGTCACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | AAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCTATTGGCAAGACCTGTaGCTTTGTAACCAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCPRDFGRIRYSIKKLNCYWQDL*LCNQNF Trigger: GAAATTTTGGTTACAAAGTCACAGGTCTTGCCAATA...GCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000393820.2 ENST00000676613.1 ENST00000678267.1 ENST00000678280.1 |
||
| CDS-3UTR TCA 90 bp | AATAGGCAGATAGGAGGTCTAATGGAACATTTGGAAACATGTTGCATAGTTATAGATAGAAGTGGGAGATaGAAATCTCCCAAGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NRQIGGLMEHLETCCIVIDRSGR*KSPKEN Trigger: GTTTTCCTTGGGAGATTTTCATCTCCCACTTCTATC...TATAACTATGCAACATGTTTCCAAATGTTCCATTAGACCTCCTATCTGCCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCAAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACACATGGCAACTCGGTTaGTTATCTAAATTATCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RFSNVQGTLAESGIALRNTWQLG*LSKLSN Trigger: GTTAGATAATTTAGATAAGCAACCGAGTTGCCATGT...GTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTTGAAAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | AAGACAAAAGCATTATTACAGGTAAGTAGAGAAATACACCGAGAGAGATACCTTTTGCTGACCACAAACTaGTTCAGAACAACAATGATC | + |
|
Preference number: 4 (lower is better) Translates to: KTKALLQVSREIHRERYLLLTTN*FRTTMI Trigger: GATCATTGTTGTTCTGAACCAGTTTGTGGTCAGCAA...AAGGTATCTCTCTCGGTGTATTTCTCTACTTACCTGTAATAATGCTTTTGTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR TCA 90 bp | TCCTCAATAATCTGCATGCTACTACATGGATCAGTTTATTCTTTTTCCCTTCAATATTGGCAAGACCTGTaGCTTTGTAACCAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIICMLLHGSVYSFSLQYWQDL*LCNQNF Trigger: GAAATTTTGGTTACAAAGTCACAGGTCTTGCCAATA...TTGAAGGGAAAAAGAATAAACTGATCCATGTAGTAGCATGCAGATTATTGAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCTAATCACTCTCACCATTTCCTTCAAATTACGGATATAGGCAAGAAACTACTATTCAAACAGATTTaGCAAAGGGTCAAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSNHSHHFLQITDIGKKLLFKQI*QRVKSS Trigger: GGAAGATTTGACCCTTTGGCAAATCTGTTTGAATAG...TAGTTTCTTGCCTATATCCGTAATTTGAAGGAAATGGTGAGAGTGATTAGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CCA 90 bp | TCCTCAATAATCTGCATGCTACTACATGGATCAGTTTATTCTTTTTCCCTTCAACTGCATGCTACTACATaGATCAGTTTATTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSIICMLLHGSVYSFSLQLHATT*ISLFFF Trigger: GAAAAAGAATAAACTGATCCATGTAGTAGCATGCAG...TTGAAGGGAAAAAGAATAAACTGATCCATGTAGTAGCATGCAGATTATTGAGGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS GCA 90 bp | CCTGAAGATCTCGCGAGCGCTTCCCAAGTCCCGCCTCCGCGCGCGTaGTCCGAAGCCCTCCCACCCCCGTACCGTAGCCGTCCTGCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PEDLASASQVPPPRA*SEALPPPYRSRPAQ Trigger: TTGCGCAGGACGGCTACGGTACGGGGGTGGGAGGGCTTCGGAGCACGCGCGCGGAGGCGGGACTTGGGAAGCGCTCGCGAGATCTTCAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678186.1 |
||
| CDS TCA 90 bp | ACACCAGGGAAAGGACGCAGGCTCCCCGCGCTTATATATAGACCCTaGAGATCTCGCGAGCGCTTCCCAAGTCCCGCCTCCGCGCGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TPGKGRRLPALIYRP*RSRERFPSPASARV Trigger: CACGCGCGCGGAGGCGGGACTTGGGAAGCGCTCGCGAGATCTTCAGGGTCTATATATAAGCGCGGGGAGCCTGCGTCCTTTCCCTGGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676613.1 ENST00000677297.1 ENST00000678186.1 ENST00000678267.1 |
||
| CDS CCA 90 bp | ACCAGCCTCTTAACATTTCCCACTTCAACAGAGCCACAGCATCCCTaGCTCACGAGTGGCAACACGCCGGTGAGTCCCGGATGTAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSLLTFPTSTEPQHP*LTSGNTPVSPGCSA Trigger: GGCGCTACATCCGGGACTCACCGGCGTGTTGCCACTCGTGAGCCAGGGATGCTGTGGCTCTGTTGAAGTGGGAAATGTTAAGAGGCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR CAA 90 bp | AAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTGGCCAGAAAGCCCTATaGGGCAGCATGGCTAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: KNTPYLFQGQKALLGSMAGQKAL*GSMASI Trigger: GATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCC...AGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CAA 90 bp | AAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTATAAGGCAGGAGACCTGCTaGAACCCAAGAAGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KRHRTGEHSLTYSNYWSIRQETC*NPRSRS Trigger: GCTTCTGCTTCTTGGGTTCAAGCAGGTCTCCTGCCT...TATACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR CAA 90 bp | ACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTAGTATCTTTCTTGAAGGATTCTaGTCCTTTCTTCACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TPYLFQGQKALLGSMASIFLEGF*SFLHWR Trigger: GCGCCAGTGAAGAAAGGACAAGAATCCTTCAAGAAA...GATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CAA 90 bp | AAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTAACCCCACAAAACACTaGCTGACCACAAACTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KNTPYLFQGQKALLGSMANPTKH*LTTNWF Trigger: GAACCAGTTTGTGGTCAGCAAGTGTTTTGTGGGGTT...AGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS TCA 90 bp | GAGGCTGAGGTGAACCCAGTAGCAGTTCGAGGATATAGCAAGCTATaGTCACATCACTGCACTCCAGCCGTTATAATGAGACTGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: EAEVNPVAVRGYSKL*SHHCTPAVIMRLSL Trigger: TAAAGACAGTCTCATTATAACGGCTGGAGTGCAGTGATGTGATCATAGCTTGCTATATCCTCGAACTGCTACTGGGTTCACCTCAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521710.2 |
||
| CDS-3UTR CAA 90 bp | ATAGAAGTGGGAGATGAAAATCTCCCAAGGAAAACGGCACAGAACTGGAGAACAGATAAGGAATCCAGGTaGAGGTCAGGTGCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IEVGDENLPRKTAQNWRTDKESR*RSGAVA Trigger: AGCAACTGCACCTGACCTCAACCTGGATTCCTTATC...TGTTCTCCAGTTCTGTGCCGTTTTCCTTGGGAGATTTTCATCTCCCACTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR CAA 90 bp | AAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCGGCCAGAAAGCCCTATaGGGCAGCATGGCTAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: KCPRDFGRIRYSIKKLNCGQKAL*GSMASI Trigger: GATACTAGCCATGCTGCCCAATAGGGCTTTCTGGCC...GCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCCTCCAATGTCCAAGGGACTTaGGCAGAATCAGGTATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VQGTLAESGIALRNLTASNVQGT*AESGIA Trigger: TGCTATACCTGATTCTGCCAAAGTCCCTTGGACATT...GGAGGCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000393820.2 ENST00000676613.1 ENST00000678267.1 ENST00000678280.1 |
||
| CDS-3UTR CAA 90 bp | AACCAAATACAACCCATAACATCCCTTTGGAGAACCATGTCAAGTGACCCAAACCCACTTTCTATCTCCTaGGCACAACTAAATGACACC | + |
|
Preference number: 5 (lower is better) Translates to: NQIQPITSLWRTMSSDPNPLSIS*AQLNDT Trigger: GGTGTCATTTAGTTGTGCCAAGGAGATAGAAAGTGG...GTTTGGGTCACTTGACATGGTTCTCCAAAGGGATGTTATGGGTTGTATTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678267.1 |
||
| CDS-3UTR CAA 90 bp | AAGAATACTCCGTATCTTTTTCAGGGCCAGAAAGCCCTATTGGGCAGCATGGCTTCTATTCAAACAGATTaGCCAAAGGGTCAAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KNTPYLFQGQKALLGSMASIQTD*PKGQIF Trigger: GAAGATTTGACCCTTTGGCAAATCTGTTTGAATAGA...AGCCATGCTGCCCAATAGGGCTTTCTGGCCCTGAAAAAGATACGGAGTATTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CAA 90 bp | GGAAAACGGCACAGAACTGGAGAACATTCCCTCACCTACTCAAACTACTGGAGTGGTCTAATGGAACATTaGGAAACATGTTGCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GKRHRTGEHSLTYSNYWSGLMEH*ETCCIV Trigger: AACTATGCAACATGTTTCCAAATGTTCCATTAGACC...ACTCCAGTAGTTTGAGTAGGTGAGGGAATGTTCTCCAGTTCTGTGCCGTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677325.1 |
||
| CDS-3UTR CAA 90 bp | AAAACACTTGCTGACCACAAACTGGTTCAGAACAACAATGATCTGGTCATCAGTTTTCTTGAAGGATTCTaGTCCTTTCTTCACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KTLADHKLVQNNNDLVISFLEGF*SFLHWR Trigger: GCGCCAGTGAAGAAAGGACAAGAATCCTTCAAGAAA...ACTGATGACCAGATCATTGTTGTTCTGAACCAGTTTGTGGTCAGCAAGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
||
| CDS-3UTR CAA 90 bp | AGGTTTTCAAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACAACCCCACAAAACACTaGCTGACCACAAACTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFSNVQGTLAESGIALRNNPTKH*LTTNWF Trigger: GAACCAGTTTGTGGTCAGCAAGTGTTTTGTGGGGTT...GTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTTGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS-3UTR CAA 90 bp | AAATGTCCAAGGGACTTTGGCAGAATCAGGTATAGCATTAAGAAACTTAACTGCAATGTCCAAGGGACTTaGGCAGAATCAGGTATAGCA | + |
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Preference number: 5 (lower is better) Translates to: KCPRDFGRIRYSIKKLNCNVQGT*AESGIA Trigger: TGCTATACCTGATTCTGCCAAAGTCCCTTGGACATT...GCAGTTAAGTTTCTTAATGCTATACCTGATTCTGCCAAAGTCCCTTGGACATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000393820.2 ENST00000676613.1 ENST00000678267.1 ENST00000678280.1 |
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| CDS TCA 90 bp | ATCTCGTATAGACTGCAATTAGAAATTTATCTTAATCACTGTCCCTaGCCCCAACAACAGTGCAAACAAAGCTGTCCAAGCCATGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: ISYRLQLEIYLNHCP*PQQQCKQSCPSHVR Trigger: TCTTACATGGCTTGGACAGCTTTGTTTGCACTGTTGTTGGGGTCAGGGACAGTGATTAAGATAAATTTCTAATTGCAGTCTATACGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676504.1 ENST00000677682.1 |
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| CDS CCA 90 bp | TTTCCAGCTGTTTGTAATTTTAATGAAGTCTCATACGCCCTCTGTTaGTTCTCTAGCATATCTTACAACCAGAATAGGCAAAGGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: FPAVCNFNEVSYALC*FSSISYNQNRQRVF Trigger: GAAAACCCTTTGCCTATTCTGGTTGTAAGATATGCTAGAGAACCAACAGAGGGCGTATGAGACTTCATTAAAATTACAAACAGCTGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000676625.1 |
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| CDS-3UTR CAA 90 bp | AAGACAAAAGCATTATTACAGGTAAGTAGAGAAATACACCGAGAGAGATACCTTAATGTCCAAGGGACTTaGGCAGAATCAGGTATAGCA | + |
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Preference number: 5 (lower is better) Translates to: KTKALLQVSREIHRERYLNVQGT*AESGIA Trigger: TGCTATACCTGATTCTGCCAAAGTCCCTTGGACATT...AAGGTATCTCTCTCGGTGTATTTCTCTACTTACCTGTAATAATGCTTTTGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS CCA 90 bp | TTTCATCTTTGTACAATCATAAGAATGTGCTTATACAAACCTAGATaGTATAGCCTACTACACACACCTAGGCTACAAACCTGTACAGTG | + |
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Preference number: 5 (lower is better) Translates to: FHLCTIIRMCLYKPR*YSLLHTPRLQTCTV Trigger: CACTGTACAGGTTTGTAGCCTAGGTGTGTGTAGTAGGCTATACCATCTAGGTTTGTATAAGCACATTCTTATGATTGTACAAAGATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677741.1 |
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| CDS TCA 90 bp | ATTAGTCATTCACGAAATCTAGCTATTACTACATGTATTAACTGGTaGCAACTTGGTGTAAAGGGCAAAGAGAAATGTCTCAATCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ISHSRNLAITTCINW*QLGVKGKEKCLNLL Trigger: CAGCAGATTGAGACATTTCTCTTTGCCCTTTACACCAAGTTGTCACCAGTTAATACATGTAGTAATAGCTAGATTTCGTGAATGACTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676625.1 |
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| CDS-3UTR CAA 90 bp | TCCTCAATAATCTGCATGCTACTACATGGATCAGTTTATTCTTTTTCCCTTCAATCTATTCAAACAGATTaGCCAAAGGGTCAAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSIICMLLHGSVYSFSLQSIQTD*PKGQIF Trigger: GAAGATTTGACCCTTTGGCAAATCTGTTTGAATAGA...TTGAAGGGAAAAAGAATAAACTGATCCATGTAGTAGCATGCAGATTATTGAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678267.1 |
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| CDS GCA 72 bp | CTCGCGAGCGCTTCCCAAGTCCCGCCTCCGCGCGCGTaGTCCGAAGCCCTCCCACCCCCGTACCGTAGCCGT | + |
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Preference number: 6 (lower is better) Translates to: LASASQVPPPRA*SEALPPPYRSR Trigger: ACGGCTACGGTACGGGGGTGGGAGGGCTTCGGAGCACGCGCGCGGAGGCGGGACTTGGGAAGCGCTCGCGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000676613.1 ENST00000678186.1 |
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| CDS TCA 72 bp | AAAGGACGCAGGCTCCCCGCGCTTATATATAGACCCTaGAGATCTCGCGAGCGCTTCCCAAGTCCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KGRRLPALIYRP*RSRERFPSPAS Trigger: GGAGGCGGGACTTGGGAAGCGCTCGCGAGATCTTCAGGGTCTATATATAAGCGCGGGGAGCCTGCGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676613.1 ENST00000677297.1 ENST00000678186.1 ENST00000678267.1 |
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| CDS CCA 72 bp | TTAACATTTCCCACTTCAACAGAGCCACAGCATCCCTaGCTCACGAGTGGCAACACGCCGGTGAGTCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: LTFPTSTEPQHP*LTSGNTPVSPG Trigger: TCCGGGACTCACCGGCGTGTTGCCACTCGTGAGCCAGGGATGCTGTGGCTCTGTTGAAGTGGGAAATGTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677325.1 ENST00000677672.1 |
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| CDS GCA 72 bp | TCTACTATAACTATGAAACGCAACTGGACTTGGTGGTaGACGTCTGTGGCCCCAGCTACTGGGGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: STITMKRNWTWW*TSVAPATGEAE Trigger: CTCAGCCTCCCCAGTAGCTGGGGCCACAGACGTGCACCACCAAGTCCAGTTGCGTTTCATAGTTATAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521710.2 |
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| CDS CCA 72 bp | CGAAACCCCTTCTCTACTATAACTATGAAACGCAACTaGACTTGGTGGTGCACGTCTGTGGCCCCAGCTACT | + |
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Preference number: 6 (lower is better) Translates to: RNPFSTITMKRN*TWWCTSVAPAT Trigger: AGTAGCTGGGGCCACAGACGTGCACCACCAAGTCCAGTTGCGTTTCATAGTTATAGTAGAGAAGGGGTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521710.2 |
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| CDS TCA 72 bp | CTTATGGGACCACCATTGTATATGCGATCCATCTGTTaGCCCAGCAGTTGCAATGAGGCACATGACTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LMGPPLYMRSIC*PSSCNEAHDCD Trigger: ATCACAGTCATGTGCCTCATTGCAACTGCTGGGTCAACAGATGGATCGCATATACAATGGTGGTCCCATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677741.1 |
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| CDS TCA 72 bp | GTGAACCCAGTAGCAGTTCGAGGATATAGCAAGCTATaGTCACATCACTGCACTCCAGCCGTTATAATGAGA | + |
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Preference number: 6 (lower is better) Translates to: VNPVAVRGYSKL*SHHCTPAVIMR Trigger: TCTCATTATAACGGCTGGAGTGCAGTGATGTGATCATAGCTTGCTATATCCTCGAACTGCTACTGGGTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521710.2 |
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| CDS CCA 72 bp | ACCACTTGGACAAAAGGTTACACAAGACTAACAAACTaGGTGGAGGGCCACATGGATAAAGAAAACAGACCA | + |
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Preference number: 6 (lower is better) Translates to: TTWTKGYTRLTN*VEGHMDKENRP Trigger: TGGTCTGTTTTCTTTATCCATGTGGCCCTCCACCCAGTTTGTTAGTCTTGTGTAACCTTTTGTCCAAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676504.1 ENST00000677682.1 |
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| CDS TCA 72 bp | AGACTGCAATTAGAAATTTATCTTAATCACTGTCCCTaGCCCCAACAACAGTGCAAACAAAGCTGTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: RLQLEIYLNHCP*PQQQCKQSCPS Trigger: GCTTGGACAGCTTTGTTTGCACTGTTGTTGGGGTCAGGGACAGTGATTAAGATAAATTTCTAATTGCAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676504.1 ENST00000677682.1 |
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| CDS CCA 72 bp | TGTACAATCATAAGAATGTGCTTATACAAACCTAGATaGTATAGCCTACTACACACACCTAGGCTACAAACC | + |
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Preference number: 6 (lower is better) Translates to: CTIIRMCLYKPR*YSLLHTPRLQT Trigger: GGTTTGTAGCCTAGGTGTGTGTAGTAGGCTATACCATCTAGGTTTGTATAAGCACATTCTTATGATTGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677741.1 |
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| CDS CAA 72 bp | CTGATCTATTTTAACATGGAAGGTCAGAATGTTATCTaGCAACCAGTGCACTACGTTCCTTGCATAATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LIYFNMEGQNVI*QPVHYVPCIME Trigger: TTCCATTATGCAAGGAACGTAGTGCACTGGTTGCAAGATAACATTCTGACCTTCCATGTTAAAATAGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519955.1 ENST00000676625.1 |
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| CDS CAA 72 bp | AGTATAAACCTCTCACTATTACCCTGGAAAACAAATTaGTGCAATGTTGTCCTCAGGTTTTGTGATCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SINLSLLPWKTN*CNVVLRFCDLG Trigger: GCCAAGATCACAAAACCTGAGGACAACATTGCACAAATTTGTTTTCCAGGGTAATAGTGAGAGGTTTATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677741.1 |
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| CDS GCA 72 bp | ATAAACCTCTCACTATTACCCTGGAAAACAAATTTGTaGAATGTTGTCCTCAGGTTTTGTGATCTTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: INLSLLPWKTNL*NVVLRFCDLGK Trigger: TTTGCCAAGATCACAAAACCTGAGGACAACATTGCACAAATTTGTTTTCCAGGGTAATAGTGAGAGGTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677741.1 |
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| CDS CAA 72 bp | TCTCACTATTACCCTGGAAAACAAATTTGTGCAATGTaGTCCTCAGGTTTTGTGATCTTGGCAAATCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SHYYPGKQICAM*SSGFVILANQF Trigger: AAACTGATTTGCCAAGATCACAAAACCTGAGGACAACATTGCACAAATTTGTTTTCCAGGGTAATAGTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677741.1 |
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