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Pregenerated sensors for NPIPB5 (Homo sapiens)

Ensembl gene IDs: ENSG00000243716

Ensembl transcript IDs: ENST00000521555.6, ENST00000536620.1

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTATTTTGTTCTACTCGGTTTTATTCTTATTGCTCAGGCTTGAGTaGACTGGCCTCTTCTCAGCTCAACCTCCGCCTCTTGGGTTCGGG +
Preference number: 1 (lower is better)
Translates to: FILFYSVLFLLLRLE*TGLFSAQPPPLGFG
Trigger: CCCGAACCCAAGAGGCGGAGGTTGAGCTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGAACAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR-3UTR CCA 90 bp TCTACTCGGTTTTATTCTTATTGCTCAGGCTTGAGTGCACTGGCCTCTTCTCAGCTTGGGTTCGGGAGGTaGTTCCATCTCAGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: STRFYSYCSGLSALASSQLGFGR*FHLSRP
Trigger: AGGGCGGCTGAGATGGAACCACCTCCCGAACCCAAG...CTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR-3UTR TCA 90 bp TCTACTCGGTTTTATTCTTATTGCTCAGGCTTGAGTGCACTGGCCTCTTCTCAGTCTGCCTCAGCCTCCTaGGTAGCTAAGGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: STRFYSYCSGLSALASSQSASAS*VAKGGV
Trigger: GACACCTCCCTTAGCTACTCAGGAGGCTGAGGCAGA...CTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR-3UTR CCA 90 bp TCTACTCGGTTTTATTCTTATTGCTCAGGCTTGAGTGCACTGGCCTCTTCTCAGCCTCTTGGGTTTGCGTaGTTTTTCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: STRFYSYCSGLSALASSQPLGFA*FFCLSL
Trigger: GAGGCTGAGGCAGAAAAACCACGCAAACCCAAGAGG...CTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR-3UTR GCA 90 bp TCTACTCGGTTTTATTCTTATTGCTCAGGCTTGAGTGCACTGGCCTCTTCTCAGTTTGCGTGGTTTTTCTaGCTCAGCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: STRFYSYCSGLSALASSQFAWFF*LSLLSS
Trigger: GCTACTCAGGAGGCTGAGGCAGAAAAACCACGCAAA...CTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR CCA 72 bp CGGGAGGTGGTTCCATCTCAGCCGCCCTCTGCCTCTTaGGTTTGCGTGGTTTTTCTGCCTCAGCCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: REVVPSQPPSAS*VCVVFLPQPPE
Trigger: CTCAGGAGGCTGAGGCAGAAAAACCACGCAAACCCAAGAGGCAGAGGGCGGCTGAGATGGAACCACCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR TCA 72 bp CTCTTGGGTTTGCGTGGTTTTTCTGCCTCAGCCTCCTaGGTAGCTAAGGGAGGTGTCTTGAGATTATCATCG +
Preference number: 3 (lower is better)
Translates to: LLGLRGFSASAS*VAKGGVLRLSS
Trigger: CGATGATAATCTCAAGACACCTCCCTTAGCTACTCAGGAGGCTGAGGCAGAAAAACCACGCAAACCCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR TCA 72 bp TTTGTTCTACTCGGTTTTATTCTTATTGCTCAGGCTTaGGTGCACTGGCCTCTTCTCAGCTCAACCTCCGCC +
Preference number: 3 (lower is better)
Translates to: FVLLGFILIAQA*VHWPLLSSTSA
Trigger: GGCGGAGGTTGAGCTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521555.6
3UTR CAA 72 bp TTTTGTTCTACTCGGTTTTATTCTTATTGCTCAGGCTaGAGTGCACTGGCCTCTTCTCAGCTCAACCTCCGC +
Preference number: 4 (lower is better)
Translates to: FCSTRFYSYCSG*SALASSQLNLR
Trigger: GCGGAGGTTGAGCTGAGAAGAGGCCAGTGCACTCAAGCCTGAGCAATAAGAATAAAACCGAGTAGAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521555.6
CDS GCA 72 bp CCCTATTTAATCACACAAGGCCTTGTCCGCGGCAGGTaGTCAATAAACACTTGTCGAATCAATGCATGTGGG +
Preference number: 6 (lower is better)
Translates to: PYLITQGLVRGR*SINTCRINACG
Trigger: CCCACATGCATTGATTCGACAAGTGTTTATTGAGCACCTGCCGCGGACAAGGCCTTGTGTGATTAAATAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536620.1