Pregenerated sensors for NPIPB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000169246

Ensembl transcript IDs: ENST00000521589.5

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGTTTCTCTCAAGATTTCACGAGATCATACACAAAGCCTGTTTGGTaGTCTCTTCACACGGACGCGCATGAAACACACGACTGCACTTCA	+
Preference number: 5 (lower is better) Translates to: SFSQDFTRSYTKPVW*SLHTDAHETHDCTS Trigger: TGAAGTGCAGTCGTGTGTTTCATGCGCGTCCGTGTGAAGAGACCACCAAACAGGCTTTGTGTATGATCTCGTGAAATCTTGAGAGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521589.5
CDS CCA 90 bp	TTCAGTTTCTCTCAAGATTTCACGAGATCATACACAAAGCCTGTTTaGTGGTCTCTTCACACGGACGCGCATGAAACACACGACTGCACT	+
Preference number: 5 (lower is better) Translates to: FSFSQDFTRSYTKPV*WSLHTDAHETHDCT Trigger: AGTGCAGTCGTGTGTTTCATGCGCGTCCGTGTGAAGAGACCACCAAACAGGCTTTGTGTATGATCTCGTGAAATCTTGAGAGAAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521589.5

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu