Pregenerated sensors for NPIPB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000234719

Ensembl transcript IDs: ENST00000399147.8, ENST00000532936.1, ENST00000673243.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTCTCTATTTCACAGCACAGGTCACCAACACTCAGGCAGGGAAACTaGATTGCTCAAGCCCAGGCGTGCTGGCGCATGTCTGTAGTCCCA	+
Preference number: 5 (lower is better) Translates to: LSISQHRSPTLRQGN*IAQAQACWRMSVVP Trigger: TGGGACTACAGACATGCGCCAGCACGCCTGGGCTTGAGCAATTCAGTTTCCCTGCCTGAGTGTTGGTGACCTGTGCTGTGAAATAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532936.1 ENST00000673243.1
CDS GCA 90 bp	TATTTCACAGCACAGGTCACCAACACTCAGGCAGGGAAACTGAATTaGTCAAGCCCAGGCGTGCTGGCGCATGTCTGTAGTCCCAGCTAC	+
Preference number: 5 (lower is better) Translates to: YFTAQVTNTQAGKLN*SSPGVLAHVCSPSY Trigger: GTAGCTGGGACTACAGACATGCGCCAGCACGCCTGGGCTTGAGCAATTCAGTTTCCCTGCCTGAGTGTTGGTGACCTGTGCTGTGAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532936.1 ENST00000673243.1
CDS CCA 72 bp	CGGGTGGTGATTCCATCTCAGCCGCTCTCCACCTCTTaGGTTTGGGTGGTTTTTCTGCCTCAGCCTCCTGAG	+
Preference number: 6 (lower is better) Translates to: RVVIPSQPLSTS*VWVVFLPQPPE Trigger: CTCAGGAGGCTGAGGCAGAAAAACCACCCAAACCCAAGAGGTGGAGAGCGGCTGAGATGGAATCACCACCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000399147.8 ENST00000673243.1
CDS TCA 72 bp	TCACAGCACAGGTCACCAACACTCAGGCAGGGAAACTaGATTGCTCAAGCCCAGGCGTGCTGGCGCATGTCT	+
Preference number: 6 (lower is better) Translates to: SQHRSPTLRQGN*IAQAQACWRMS Trigger: AGACATGCGCCAGCACGCCTGGGCTTGAGCAATTCAGTTTCCCTGCCTGAGTGTTGGTGACCTGTGCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532936.1 ENST00000673243.1
CDS GCA 72 bp	GCACAGGTCACCAACACTCAGGCAGGGAAACTGAATTaGTCAAGCCCAGGCGTGCTGGCGCATGTCTGTAGT	+
Preference number: 6 (lower is better) Translates to: AQVTNTQAGKLN*SSPGVLAHVCS Trigger: ACTACAGACATGCGCCAGCACGCCTGGGCTTGAGCAATTCAGTTTCCCTGCCTGAGTGTTGGTGACCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532936.1 ENST00000673243.1
CDS GCA 72 bp	TTCTACTCAGTTTTATTCTTATTGCTCAGGCTTGAGTaGAATGGCCTGTTCTCAGCTTACTCAACCTCCGCC	+
Preference number: 6 (lower is better) Translates to: FYSVLFLLLRLE*NGLFSAYSTSA Trigger: GGCGGAGGTTGAGTAAGCTGAGAACAGGCCATTGCACTCAAGCCTGAGCAATAAGAATAAAACTGAGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673243.1
CDS TCA 72 bp	TTTGTTCTACTCAGTTTTATTCTTATTGCTCAGGCTTaGGTGCAATGGCCTGTTCTCAGCTTACTCAACCTC	+
Preference number: 6 (lower is better) Translates to: FVLLSFILIAQA*VQWPVLSLLNL Trigger: GAGGTTGAGTAAGCTGAGAACAGGCCATTGCACTCAAGCCTGAGCAATAAGAATAAAACTGAGTAGAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673243.1

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