RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPHS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000161270

Ensembl transcript IDs: ENST00000353632.6, ENST00000378910.10, ENST00000585400.1, ENST00000591817.1, ENST00000592132.1

Found 537 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCCCTCCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATaGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGAC +
Preference number: 1 (lower is better)
Translates to: APSMSSPDTKSLWVL*SSPNQLGPGCNERD
Trigger: GTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGGAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
3UTR CCA 90 bp TGTCACTCAGCCCCCTCCATGTCCTCTCCTGACACCAAGTCCCTTTaGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAAT +
Preference number: 1 (lower is better)
Translates to: CHSAPSMSSPDTKSL*VLWSSPNQLGPGCN
Trigger: ATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGGAGGGGGCTGAGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
3UTR-3UTR GCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTTGGAGTGTAAATTCCTaGAGGTGCAGGACAATGGGG +
Preference number: 2 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCWSVNS*RCRTMG
Trigger: CCCCATTGTCCTGCACCTGCAGGAATTTACACTCCA...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
3UTR-3UTR GCA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGATGGAGTGTAAATTCCTaGAGGTGCAGGACAATGGGG +
Preference number: 2 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERWSVNS*RCRTMG
Trigger: CCCCATTGTCCTGCACCTGCAGGAATTTACACTCCA...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
3UTR-3UTR GCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGCCCCAGGAAACCTCTaGTGTGCTCTCTGCCACCGT +
Preference number: 2 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPAPGNL*CALCHR
Trigger: ACGGTGGCAGAGAGCACAGCAGAGGTTTCCTGGGGC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
3UTR-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAATGAGAGAGACCAGTaGAGTGTAAATTCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTNERDQ*SVNSCR
Trigger: CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATT...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
3UTR TCA 72 bp CCCCAGGATGCACCTTGTTTCTACTCTGGTACCAGCTaGACCATCTCTGTCACTCAGCCCCCTCCATGTCCT +
Preference number: 3 (lower is better)
Translates to: PQDAPCFYSGTS*TISVTQPPPCP
Trigger: AGGACATGGAGGGGGCTGAGTGACAGAGATGGTTCAGCTGGTACCAGAGTAGAAACAAGGTGCATCCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
3UTR TCA 72 bp AATGAACAGAGTTTTTCATATGTCTTTCCCCACTTCTaGAAACTTTACTTCATGAAGCACTTAGGGACCCTC +
Preference number: 3 (lower is better)
Translates to: NEQSFSYVFPHF*KLYFMKHLGTL
Trigger: GAGGGTCCCTAAGTGCTTCATGAAGTAAAGTTTTCAGAAGTGGGGAAAGACATATGAAAAACTCTGTTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCGGCCGCCCGCTGGACTaGGGCGATAGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAGRPLD*GDSRGR
Trigger: CCTTCCGCGGCTATCGCCTCAGTCCAGCGGGCGGCC...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCACGCGCCGCGACTCCTaGGGCAGCCGCGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSATRRDS*GSRDSV
Trigger: GACCGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGT...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGGCCGCCCGCTGGACTaGGGCGATAGCCGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGGRPLD*GDSRGR
Trigger: CCTTCCGCGGCTATCGCCTCAGTCCAGCGGGCGGCC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGACGCGCCGCGACTCCTaGGGCAGCCGCGACTCGGTC +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSTRRDS*GSRDSV
Trigger: GACCGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGT...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCTGGACAGGATGCGATaGCGGGGGCCGCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSALDRMR*RGPPAG
Trigger: TCCAGCGGGCGGCCCCCGGCATCGCATCCTGTCCAG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTGCAGGAGAGAAGCCCTaGGCGTCGTCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCAGEKP*ASSPGP
Trigger: TGGCCCTGGGGACGACGCTCAGGGCTTCTCTCCTGC...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTGGCCTGGCCACTCGATaGCAGGGGGTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCGLATR*QGVLEG
Trigger: TCCCTCCAGGACCCCCTGTCATCGAGTGGCCAGGCC...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTATGTCCGACGGCCCTGTaGCCAGCACCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVCPTAL*PAPALG
Trigger: CCCGAGAGCTGGTGCTGGTCACAGGGCCGTCGGACA...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCGCTGCGTGGACGCGCTaGGCTGTCCAGCCTTGCACG +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAAAWTR*AVQPCT
Trigger: CGTGCAAGGCTGGACAGCTCAGCGCGTCCACGCAGC...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGCGGCGGCGGAGCCTTTaGATGGGGCTCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNERRRSL*MGLSGV
Trigger: CACCCCGGAGAGCCCCATTCAAAGGCTCCGCCGCCG...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGCGCGGAAGGTCCAGTTaGAGGCCTCGGGGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQRGRSS*RPRGRG
Trigger: ACCCCGCCCCCGAGGCCTTCAACTGGACCTTCCGCG...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCGCGGAAGGTCCAGTTaGAGGCCTCGGGGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGRGRSS*RPRGRG
Trigger: ACCCCGCCCCCGAGGCCTTCAACTGGACCTTCCGCG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGCAGGTCCCCCTACTGTaGCCCCCACAGCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQQVPLL*PPQRPL
Trigger: CAGCGGGCGCTGTGGGGGTCACAGTAGGGGGACCTG...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTCCACGCTGCCGAGATaGACGCGCCGCGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRSTLPR*TRRDSC
Trigger: GCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGA...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGCTGCGGGCCACCGCCTaGGTGTGCTCTGTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNELRATA*VCSVPH
Trigger: GTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAG...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGCGGGCCACCGCCTaGGTGTGCTCTGTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGLRATA*VCSVPH
Trigger: GTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGGCGGAGCCTTTGAATaGGGCTCTCCGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVGGAFE*GSPGWG
Trigger: GCCCCACCCCGGAGAGCCCCATTCAAAGGCTCCGCC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCACTGCCAGGGGTGCTaGCCCCACAACGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAHCQGC*PHNAAP
Trigger: TGGAGCTGCGTTGTGGGGTCAGCACCCCTGGCAGTG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGGCCTGGCCACTCGATaGCAGGGGGTCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAGLATR*QGVLEG
Trigger: TCCCTCCAGGACCCCCTGTCATCGAGTGGCCAGGCC...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCTGTCCGACGGCCCTGTaGCCAGCACCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGCPTAL*PAPALG
Trigger: CCCGAGAGCTGGTGCTGGTCACAGGGCCGTCGGACA...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCAGCCCCGAGGGTCCTaGAGGTGGCTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGQPRGS*RWLCGQ
Trigger: CTGCCCACAGAGCCACCTTCAGGACCCTCGGGGCTG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGCCACCGCCTGGGTGTaGTCTGTGCCCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAATAWV*SVPHAV
Trigger: CACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGC...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTCCACGCTGCCGAGATaGACGCGCCGCGACTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQSTLPR*TRRDSC
Trigger: GCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGA...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGACGGGCGCAGTGCGGATaGGTTGGCCAGGATCGTCAC +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGRAQCG*VGQDRH
Trigger: GTGACGATCCTGGCCAACGCATCCGCACTGCGCCCG...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGTCTCCCGGGCGCAGTaGGGATGCGTTGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVVSRAQ*GCVGQD
Trigger: ATCCTGGCCAACGCATCCGCACTGCGCCCGGGAGAC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAGTCTCCCGGGCGCAGTaGGGATGCGTTGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVVSRAQ*GCVGQD
Trigger: ATCCTGGCCAACGCATCCGCACTGCGCCCGGGAGAC...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATCTGGACAGGATGCGATaGCGGGGGCCGCCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNLDRMR*RGPPAG
Trigger: TCCAGCGGGCGGCCCCCGGCATCGCATCCTGTCCAG...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGCCGCGCTTCCGCGGTaGCCTCAGAGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRAALPR*PQSSGS
Trigger: ACTGCCAGAACTCTGAGGGCACCGCGGAAGCGCGGC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACGGAGCAGCCGTCGTaGTGGAGGCGCCACCCCATT +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRTEQPS*WRRHPI
Trigger: AATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGT...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGCCCCACAGCGCCCGCTaGCAGCCACCTGCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREPHSAR*QPPASV
Trigger: GACAGACGCAGGTGGCTGGCAGCGGGCGCTGTGGGG...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGTACCTCGGGAAGCCTaGGATCCTGGGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGVPREA*DPGVGA
Trigger: GGCCCCGACCCCAGGATCCCAGGCTTCCCGAGGTAC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCGATGCAGAGCCCCGCTaGACAGGATGCGATGCCGGG +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLDAEPR*TGCDAG
Trigger: CCCGGCATCGCATCCTGTCCAGCGGGGCTCTGCATC...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCGAGCAGCCGTCGTGCTaGAGGCGCCACCCCATTGTC +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETEQPSC*RRHPIV
Trigger: GACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTC...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGCCTCGGGCACGGCAGTaGAGGGTGGCAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRPRARQ*RVAELV
Trigger: CACCAGTTCTGCCACCCTCCACTGCCGTGCCCGAGG...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGCAGGAGAGAAGCCCTaGGCGTCGTCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERAGEKP*ASSPGP
Trigger: TGGCCCTGGGGACGACGCTCAGGGCTTCTCTCCTGC...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGACAACGCAGCTCCACTaGGGCCCCCTCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQTTQLH*GPLHHR
Trigger: ACGGTGGTGGAGGGGGCCTCAGTGGAGCTGCGTTGT...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGACAACGCAGCTCCACTaGGGCCCCCTCCACCACCGT +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSTTQLH*GPLHHR
Trigger: ACGGTGGTGGAGGGGGCCTCAGTGGAGCTGCGTTGT...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGCCCAGCTACCCAGGTaGCCATGGTGCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGAQLPR*PWCLPL
Trigger: CAGAGGCAGGCACCATGGTCACCTGGGTAGCTGGGC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTATGTGGGCCTCGCAGCTaGGCTGCGCTCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVCGPRS*AALHGL
Trigger: AAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACA...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGCTGCGTGGACGCGCTaGGCTGTCCAGCCTTGCACG +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSAAWTR*AVQPCT
Trigger: CGTGCAAGGCTGGACAGCTCAGCGCGTCCACGCAGC...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGTCACGCGCTGGCCATaGTCGCGGGATGACACTTGC +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVVTRWP*SRDDTC
Trigger: GCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGAC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGCCAGTTTGGCATGGTaGATCCGCAGGCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRASLAW*IRRRPV
Trigger: AACGGGGCGCCTGCGGATTCACCATGCCAAACTGGC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGCCAGTTTGGCATGGTaGATCCGCAGGCGCCCCGTT +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVASLAW*IRRRPV
Trigger: AACGGGGCGCCTGCGGATTCACCATGCCAAACTGGC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGTAGACCAGTCAGCGTaGAGGTGGTGGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVVDQSA*RWWPGV
Trigger: CACCCCAGGCCACCACCTTCACGCTGACTGGTCTAC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGATGGGGGCCTCCAGTaGTGGGCTAGACGCCTCACA +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRDGGLQ*WARRLT
Trigger: TGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCCATC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCTGTCCTGCCCGCACGTaGCCCTCATCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTCPART*PSSRPG
Trigger: GCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACA...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGTGTCCTGCCCGCACGTaGCCCTCATCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMRECPART*PSSRPG
Trigger: GCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACA...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGCCACCGCCTGGGTGTaGTCTGTGCCCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSATAWV*SVPHAV
Trigger: CACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGC...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGCCTCGCAGCTGAGCTaGGCTCCATGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGASQLS*APWSSG
Trigger: GCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCAGATTTCTCCACGCTaGCGAGATGCACGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCQISPR*RDARAA
Trigger: CGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATAGCAACGCCTCGCCCTaGTCCACCGCGGTCACCACC +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNSNASP*STAVTT
Trigger: GGTGGTGACCGCGGTGGAGCAGGGCGAGGCGTTGCT...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAAGCAACGCCTCGCCCTaGTCCACCGCGGTCACCACC +
Preference number: 4 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERSNASP*STAVTT
Trigger: GGTGGTGACCGCGGTGGAGCAGGGCGAGGCGTTGCT...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCCGCGCTTCCGCGGTaGCCTCAGAGTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERAALPR*PQSSGS
Trigger: ACTGCCAGAACTCTGAGGGCACCGCGGAAGCGCGGC...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGACGGAGCAGCCGTCGTaGTGGAGGCGCCACCCCATT +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMTEQPS*WRRHPI
Trigger: AATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGT...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGGGGCCTCCAGTGCTaGGCTAGACGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERGGLQC*ARRLTD
Trigger: GTCTGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCC...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGGGGGGCCTCCAGTGCTaGGCTAGACGCCTCACAGAC +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEGGLQC*ARRLTD
Trigger: GTCTGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCC...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTACTGTGCCCCACGCTGTaGACACCGGCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVLCPTL*TPAGHS
Trigger: AGAATGGCCAGCCGGTGTCCACAGCGTGGGGCACAG...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTGCAGACACGCTGTTGTaGGCCTCGCAGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCADTLL*ASQLSC
Trigger: GCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGC...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGGATGCAGAGCCCCGCTaGACAGGATGCGATGCCGGG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQDAEPR*TGCDAG
Trigger: CCCGGCATCGCATCCTGTCCAGCGGGGCTCTGCATC...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCCCGCAGGCGCCCCGTTaGTCCCCTGGATATCTTCTC +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETPQAPR*SPGYLL
Trigger: GAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGG...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCCGCAGGCGCCCCGTTaGTCCCCTGGATATCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAPQAPR*SPGYLL
Trigger: GAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGGAGCAGCCGTCGTGCTaGAGGCGCCACCCCATTGTC +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQEQPSC*RRHPIV
Trigger: GACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTC...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGGGCGGCAGACACGTTaGCAATGGTCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGGRQTR*QWSGGC
Trigger: GCAGCCTCCTGACCATTGCCAACGTGTCTGCCGCCC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATGCCCAGCTACCCAGGTaGCCATGGTGCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNAQLPR*PWCLPL
Trigger: CAGAGGCAGGCACCATGGTCACCTGGGTAGCTGGGC...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGTCACGCGCTGGCCATaGTCGCGGGATGACACTTGC +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMVTRWP*SRDDTC
Trigger: GCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGAC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGGTAGACCAGTCAGCGTaGAGGTGGTGGCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEVDQSA*RWWPGV
Trigger: CACCCCAGGCCACCACCTTCACGCTGACTGGTCTAC...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCGCAGGAATCGCCAACTaGGCCAGGCCTTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAAGIAN*ARPSVS
Trigger: GCTGACTGAAGGCCTGGCGCAGTTGGCGATTCCTGC...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGGGTGACCATGGTGCCTaGCTCTGGGGTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEGDHGA*LWGQQE
Trigger: CTCCTGCTGACCCCAGAGGCAGGCACCATGGTCACC...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGATGGGGGCCTCCAGTaGTGGGCTAGACGCCTCACA +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERDGGLQ*WARRLT
Trigger: TGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCCATC...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCTCCAAGCTCTGTCCTaGCCGCACGTGCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERALQALS*PHVPLI
Trigger: GATGAGGGGCACGTGCGGGCAGGACAGAGCTTGGAG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGTCATCACCAGCACACTaGGGGCCACCGCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNESSPAH*GPPPGC
Trigger: ACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGA...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGCCTCGCAGCTGAGCTaGGCTCCATGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGASQLS*APWSSG
Trigger: GCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGTGCTCCTGGGTCCCTaGAGACACGCTGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGVLLGP*RHAVVG
Trigger: GCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCAC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGTGCTCCTGGGTCCCTaGAGACACGCTGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSVLLGP*RHAVVG
Trigger: GCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCAC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCTCCATGGGCAGCAGCTaGCGCCAGCCCAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTSMGSS*RQPSHH
Trigger: ATGGTGGCTGGGCTGGCGGCAGCTGCTGCCCATGGA...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGAACTGCACCGCCAGCTaGGTGGACGCGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQNCTAS*VDALSC
Trigger: ACAGCTCAGCGCGTCCACGCAGCTGGCGGTGCAGTT...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTCGGGCGCAGTGCGGATaGGTTGGCCAGGATCGTCAC +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSRAQCG*VGQDRH
Trigger: GTGACGATCCTGGCCAACGCATCCGCACTGCGCCCG...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCTCAGAGCGGCCGACCTaGCACTCATACTCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLSERPT*HSYSAS
Trigger: TGACGCGGAGTATGAGTGCCAGGTCGGCCGCTCTGA...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTATGGAGAGGATCACTCTaGGAGACACGAGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVWRGSL*ETRARA
Trigger: GGCCCGAGCTCGTGTCTCCCAGAGTGATCCTCTCCA...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGATGGAGAGGATCACTCTaGGAGACACGAGCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGWRGSL*ETRARA
Trigger: GGCCCGAGCTCGTGTCTCCCAGAGTGATCCTCTCCA...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGCTGTGGACACCGGCTaGCCATTCTTCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGAVDTG*PFFSHC
Trigger: GCAGTGGCTGAAGAATGGCCAGCCGGTGTCCACAGC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCCTGAGCTGCGCTCCATaGTCTTCTGGCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETLSCAP*SSGLTV
Trigger: GACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAG...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGTGATGCCGTGCTCCTaGGTCCCTGCAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGVMPCS*VPADTL
Trigger: CAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCAC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGTGATGCCGTGCTCCTaGGTCCCTGCAGACACGCTG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGVMPCS*VPADTL
Trigger: CAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCAC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGCCTGGAGGGCACGGATaGTGGGAGCATAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRPGGHG*WEHSAR
Trigger: ACGTGCACTATGCTCCCACCATCCGTGCCCTCCAGG...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGCAGCCTGGGCCAGTTTaGCATGGTGAATCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRQPGPV*HGESAG
Trigger: GCCTGCGGATTCACCATGCCAAACTGGCCCAGGCTG...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCAGCCTGGGCCAGTTTaGCATGGTGAATCCGCAGGC +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCQPGPV*HGESAG
Trigger: GCCTGCGGATTCACCATGCCAAACTGGCCCAGGCTG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCACGGCAGTGGAGGGTaGCAGAACTGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAHGSGG*QNWCCL
Trigger: GAGACAGCACCAGTTCTGCCACCCTCCACTGCCGTG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATCCTCGGGCACGGCAGTaGAGGGTGGCAGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNPRARQ*RVAELV
Trigger: CACCAGTTCTGCCACCCTCCACTGCCGTGCCCGAGG...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCCCCCCAAGGCATTACTaGCCAGCAGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETPPRHY*PAARPC
Trigger: ACAGGGTCTGGCTGCTGGCCAGTAATGCCTTGGGGG...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTGTGTCTTCAGGCCAGTaGAGGTCCCAGGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCVSSGQ*RSQGPI
Trigger: GATGGGACCCTGGGACCTCCACTGGCCTGAAGACAC...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGACTCCGCGTCATCGCTaGGGTCACAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSTPRHR*GHRPRC
Trigger: ACATCGAGGCCTGTGACCTCAGCGATGACGCGGAGT...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCCCCAGACACACAGTTaGCCACGTACTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGPQTHS*PRTPAQ
Trigger: CTGGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGCCCCAGACACACAGTTaGCCACGTACTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQPQTHS*PRTPAQ
Trigger: CTGGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGG...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTGTGGGCCTCGCAGCTaGGCTGCGCTCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNCGPRS*AALHGL
Trigger: AAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACA...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGTCCAGCCTTGCACGTaGACTTGGCCTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMVQPCT*TWPGCP
Trigger: CGGACAACCAGGCCAAGTTCACGTGCAAGGCTGGAC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGTCCAGCCTTGCACGTaGACTTGGCCTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGVQPCT*TWPGCP
Trigger: CGGACAACCAGGCCAAGTTCACGTGCAAGGCTGGAC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCGCCATGATCGCGGGATaGCACTTGCAGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLAMIAG*HLQKDA
Trigger: AGCGTCCTTCTGCAAGTGTCATCCCGCGATCATGGC...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGTCTCTCCCAGTTaGACATGCCCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGPVSPS*TCPGGW
Trigger: CCATCCTCCCGGGCATGTTCAACTGGGAGAGACTGG...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCCAGGGCCTCATACCTaGTGCAGAACCTCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCPGPHT*CRTSVA
Trigger: TGCCACAGAGGTTCTGCATCAGGTATGAGGCCCTGG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGCAGGAATCGCCAACTaGGCCAGGCCTTCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMAGIAN*ARPSVS
Trigger: GCTGACTGAAGGCCTGGCGCAGTTGGCGATTCCTGC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCATCTTTGGCCCATTaGACCGCACTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAPSLAH*TALPGV
Trigger: CACCCCTGGCAGTGCGGTGCAATGGGCCAAAGATGG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCCTCCAAGCTCTGTCCTaGCCGCACGTGCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTLQALS*PHVPLI
Trigger: GATGAGGGGCACGTGCGGGCAGGACAGAGCTTGGAG...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCATCACCAGCACACTaGGGGCCACCGCCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNSSPAH*GPPPGC
Trigger: ACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGA...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGTGCAGTGTGATGCCGTaGTCCTGGGTCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSCSVMP*SWVPAD
Trigger: GTCTGCAGGGACCCAGGAGCACGGCATCACACTGCA...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTTCCATGGGCAGCAGCTaGCGCCAGCCCAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SHRTRQHFIFETTFTICPSMGSS*RQPSHH
Trigger: ATGGTGGCTGGGCTGGCGGCAGCTGCTGCCCATGGA...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGGCTCTCGGGAGAAGGTaGTCCCAGATTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRALGRR*SQISPR
Trigger: GCGTGGAGAAATCTGGGAGCACCTTCTCCCGAGAGC...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATAACTGCACCGCCAGCTaGGTGGACGCGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNNCTAS*VDALSC
Trigger: ACAGCTCAGCGCGTCCACGCAGCTGGCGGTGCAGTT...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGTCACCACCAGCACCTaGTCCCCCAGGAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSVTTST*SPRNSG
Trigger: TCCAGAGTTCCTGGGGGAGCAGGTGCTGGTGGTGAC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGGTGATCTCAGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRVISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCAC...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGGCCCCAGGAAACCTCTaGTGTGCTCTCTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQAPGNL*CALCHR
Trigger: ACGGTGGCAGAGAGCACAGCAGAGGTTTCCTGGGGC...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGGAGCAGCCCATCTTTaGCCCATTGCACCGCACTGC +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGGAAHL*PIAPHC
Trigger: GCAGTGCGGTGCAATGGGCCAAAGATGGGCTGCTCC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTCAGAGCGGCCGACCTaGCACTCATACTCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQSERPT*HSYSAS
Trigger: TGACGCGGAGTATGAGTGCCAGGTCGGCCGCTCTGA...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCTGTGGACACCGGCTaGCCATTCTTCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSAVDTG*PFFSHC
Trigger: GCAGTGGCTGAAGAATGGCCAGCCGGTGTCCACAGC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCGCTCCATGGTCTTCTaGCCTCACGGTCATCACCAG +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSARSMVF*PHGHHQ
Trigger: CTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCTGAGCTGCGCTCCATaGTCTTCTGGCCTCACGGTC +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGLSCAP*SSGLTV
Trigger: GACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAG...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGCAGACACGCTGTTGTaGGCCTCGCAGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSADTLL*ASQLSC
Trigger: GCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGC...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGAGCTTCTGGCCCTCTaGGGGACCCTCAATCCACAG +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMELLAL*GTLNPQ
Trigger: CTGTGGATTGAGGGTCCCCCAGAGGGCCAGAAGCTC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGAGCTTCTGGCCCTCTaGGGGACCCTCAATCCACAG +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSELLAL*GTLNPQ
Trigger: CTGTGGATTGAGGGTCCCCCAGAGGGCCAGAAGCTC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGCATGAGGGAGGGCTCTaGGTTGCCCCCGATAGCCAA +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERHEGGL*VAPDSQ
Trigger: TTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATG...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGGAGGGCACGGATGGTaGGAGCATAGTGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAGGHGW*EHSARP
Trigger: TGGACGTGCACTATGCTCCCACCATCCGTGCCCTCC...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGGAGGGCACGGATGGTaGGAGCATAGTGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGGGHGW*EHSARP
Trigger: TGGACGTGCACTATGCTCCCACCATCCGTGCCCTCC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGCCTGGAGGGCACGGATaGTGGGAGCATAGTGCACGT +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEPGGHG*WEHSAR
Trigger: ACGTGCACTATGCTCCCACCATCCGTGCCCTCCAGG...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCACCTCAGTGGGGTCCTaGAGGGCACGGATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTTSVGS*RARMVG
Trigger: TCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGT...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCACGGCAGTGGAGGGTaGCAGAACTGGTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAHGSGG*QNWCCL
Trigger: GAGACAGCACCAGTTCTGCCACCCTCCACTGCCGTG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGGTGTACCTGGGATCTTaGAGATCCAGAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRVYLGS*RSRGTP
Trigger: CGGGGTCCCTCTGGATCTCCAAGATCCCAGGTACAC...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGACTGTGGACACCACCCTaGTGGTATGTGTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGLWTPP*WYVCSV
Trigger: CACGGAGCACACATACCACCAGGGTGGTGTCCACAG...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTACTGTGGACACCACCCTaGTGGTATGTGTGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVLWTPP*WYVCSV
Trigger: CACGGAGCACACATACCACCAGGGTGGTGTCCACAG...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCGTCAGGAGGCTGCTGTaGACACCACCCTGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAVRRLL*TPPWWY
Trigger: ATACCACCAGGGTGGTGTCCACAGCAGCCTCCTGAC...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAGTGAAGGTGGTGGCCTaGGGTGGTACGACATCCACA +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVVKVVA*GGTTST
Trigger: TGTGGATGTCGTACCACCCCAGGCCACCACCTTCAC...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCCCCAAGGCATTACTaGCCAGCAGCCAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAPPRHY*PAARPC
Trigger: ACAGGGTCTGGCTGCTGGCCAGTAATGCCTTGGGGG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGAGGCTGGTGGAGACCTaGGGTAGTGATGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRRLVET*GSDGKL
Trigger: CAGCTTCCCATCACTACCCCAGGTCTCCACCAGCCT...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGGCCTCCCCAAGTGTTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGGLPKC*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAACACTTGGGGAGGCC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGCACTCAGGAGAATGGTaGTGTCAGGTGCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRHSGEW*CQVLAS
Trigger: CGAAGCCAGCACCTGACATCACCATTCTCCTGAGTG...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAAACATTCACGGTGAATaGGGCCTTGATGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGNIHGE*GLDGGL
Trigger: GAGGCCCCCATCAAGGCCTCATTCACCGTGAATGTT...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGGCGACTGGACTTGCTaGCACAGGAGAGTGTCACGT +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGGDWTC*HRRVSR
Trigger: ACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGACATGCAGTCCATCCATaGCTGTCTCCTCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGHAVHP*LSPPWA
Trigger: TGCCCATGGAGGAGACAGTCATGGATGGACTGCATG...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCATGCAGTCCATCCATaGCTGTCTCCTCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLHAVHP*LSPPWA
Trigger: TGCCCATGGAGGAGACAGTCATGGATGGACTGCATG...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGTTGGACATGGAGATGTaGCCGCCATGCAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRLDMEM*PPCSPS
Trigger: GGATGGACTGCATGGCGGTCACATCTCCATGTCCAA...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGTCCTTGTACCACATaGGGGAGGGCTCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMSPCTT*GRALGC
Trigger: GCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACT...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTCGGCGGCGGAGCCTTTaGATGGGGCTCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPRRRSL*MGLSGV
Trigger: CACCCCGGAGAGCCCCATTCAAAGGCTCCGCCGCCG...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCTGGTGGCTGTACATGTaGAGAGGGCGTAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETWWLYM*RGRNPG
Trigger: CCCAGGATTACGCCCTCTTCACATGTACAGCCACCA...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGCTGCCTCTGTTGTGCTaGCCGTGGAGCTCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNELPLLC*PWSSEC
Trigger: ACACTCAGAGCTCCACGGTCAGCACAACAGAGGCAG...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGCTGCCTCTGTTGTGCTaGCCGTGGAGCTCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMLPLLC*PWSSEC
Trigger: ACACTCAGAGCTCCACGGTCAGCACAACAGAGGCAG...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCTGCCTCTGTCTTCTCTaGGATGCCCTCAGCAAGACG +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETCLCLL*DALSKT
Trigger: CGTCTTGCTGAGGGCATCTCAGAGAAGACAGAGGCA...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTGGTGACCATGGTGCCTaGCTCTGGGGTCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SHRTRQHFIFETTFTICPGDHGA*LWGQQE
Trigger: CTCCTGCTGACCCCAGAGGCAGGCACCATGGTCACC...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGTTGACCACGTACTCCTaGCCAGCTACCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNELTTYS*PATQVT
Trigger: GGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAA...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTGCAGTGTGATGCCGTaGTCCTGGGTCCCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNCSVMP*SWVPAD
Trigger: GTCTGCAGGGACCCAGGAGCACGGCATCACACTGCA...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCTCGCGGGATGACACTTaGAGAAGGACGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTSRDDT*RRTLLA
Trigger: CGCCAGGAGCGTCCTTCTGCAAGTGTCATCCCGCGA...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCGCGGGATGACACTTaGAGAAGGACGCTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNSRDDT*RRTLLA
Trigger: CGCCAGGAGCGTCCTTCTGCAAGTGTCATCCCGCGA...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGTCACCACCAGCACCTaGTCCCCCAGGAACTCTGGA +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSVTTST*SPRNSG
Trigger: TCCAGAGTTCCTGGGGGAGCAGGTGCTGGTGGTGAC...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCCCTGGTGGTATGTGTaGTCCGTGTACCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAPWWYV*SVYLGS
Trigger: AGATCCCAGGTACACGGAGCACACATACCACCAGGG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGCGGTAATACGGCTCTaGCTCTGTTGTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGAVIRL*LCCADR
Trigger: ACGGTCAGCACAACAGAGGCAGAGCCGTATTACCGC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGTGGCAGAGTCAGCCCTaGTCTCTGACCCAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERWQSQP*SLTQLE
Trigger: CTCAAGCTGGGTCAGAGAGCAGGGCTGACTCTGCCA...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCTCTATCTTCTCTCCTaGCACCCCTCACTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSALYLLS*HPSLLL
Trigger: GAGCAGGAGTGAGGGGTGGCAGGAGAGAAGATAGAG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCTCGCCCAGGCTGGAGTaGAGTGGCGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTSPRLE*SGVISA
Trigger: AGCTGAGATCACGCCACTGCACTCCAGCCTGGGCGA...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTATCAGCAGGAGCAGCTTaGGAGGAACCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVSAGAA*EEPGWR
Trigger: TCTCCATCCTGGTTCCTCCCAAGCTGCTCCTGCTGA...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCGGTGATGTCAGGTGCTaGCTTCGCGTCCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTGDVRC*LRVPRH
Trigger: GTGTCTGGGGACGCGAAGCCAGCACCTGACATCACC...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGGTGATGTCAGGTGCTaGCTTCGCGTCCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERGDVRC*LRVPRH
Trigger: GTGTCTGGGGACGCGAAGCCAGCACCTGACATCACC...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGTCAGCCACTGCAGTGTaGCTAAGGGATTACCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRSATAV*LRDYPL
Trigger: GAGGGGGTAATCCCTTAGCCACACTGCAGTGGCTGA...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTCTGTGCCCCACGCTGTaGACACCGGCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: SHRTRQHFIFETTFTICPLCPTL*TPAGHS
Trigger: AGAATGGCCAGCCGGTGTCCACAGCGTGGGGCACAG...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCCATGAGGGAGGGCTCTaGGTTGCCCCCGATAGCCAA +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTHEGGL*VAPDSQ
Trigger: TTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATG...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTCACGTGAACTTGGCCTaGTTGTCCGACGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSHVNLA*LSDGPV
Trigger: CACAGGGCCGTCGGACAACCAGGCCAAGTTCACGTG...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGACACGTGAACTTGGCCTaGTTGTCCGACGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERHVNLA*LSDGPV
Trigger: CACAGGGCCGTCGGACAACCAGGCCAAGTTCACGTG...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGATCGTCACGTTAGTTaGGGGAAACTGCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGDRHVS*GKLHRQ
Trigger: CTGGCGGTGCAGTTTCCCCCAACTAACGTGACGATC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTGATCGTCACGTTAGTTaGGGGAAACTGCACCGCCAG +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCDRHVS*GKLHRQ
Trigger: CTGGCGGTGCAGTTTCCCCCAACTAACGTGACGATC...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCTCCCCCAGGAACTCTaGACGGTACAGTACGTTGAG +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSALPQEL*TVQYVE
Trigger: CTCAACGTACTGTACCGTCCAGAGTTCCTGGGGGAG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCCTCCCCCAGGAACTCTaGACGGTACAGTACGTTGAG +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETLPQEL*TVQYVE
Trigger: CTCAACGTACTGTACCGTCCAGAGTTCCTGGGGGAG...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTACCGGGAGGATGGGATTaGCATCGACAGTGCAGACTA +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVPGGWD*HRQCRL
Trigger: TAGTCTGCACTGTCGATGCCAATCCCATCCTCCCGG...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGACATGCCCGGGAGGATaGGATTGGCATCGACAGTGC +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMTCPGG*DWHRQC
Trigger: GCACTGTCGATGCCAATCCCATCCTCCCGGGCATGT...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGACATGCCCGGGAGGATaGGATTGGCATCGACAGTGC +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERTCPGG*DWHRQC
Trigger: GCACTGTCGATGCCAATCCCATCCTCCCGGGCATGT...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGTGGGGTGCTCCACCTaGGGGGCAAATCTGACAACA +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERVGCST*GANLTT
Trigger: TGTTGTCAGATTTGCCCCCCAGGTGGAGCACCCCAC...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGTGTACCTGGGATCTTaGAGATCCAGAGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERVYLGS*RSRGTP
Trigger: CGGGGTCCCTCTGGATCTCCAAGATCCCAGGTACAC...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTTGGACACCACCCTGGTaGTATGTGTGCTCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCWTPPW*YVCSVY
Trigger: GTACACGGAGCACACATACCACCAGGGTGGTGTCCA...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCTGGACACCACCCTGGTaGTATGTGTGCTCCGTGTAC +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLWTPPW*YVCSVY
Trigger: GTACACGGAGCACACATACCACCAGGGTGGTGTCCA...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGGTCAGGAGGCTGCTGTaGACACCACCCTGGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEVRRLL*TPPWWY
Trigger: ATACCACCAGGGTGGTGTCCACAGCAGCCTCCTGAC...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCAGACACGTTGGCAATaGTCAGGAGGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLQTRWQ*SGGCCG
Trigger: TCCACAGCAGCCTCCTGACCATTGCCAACGTGTCTG...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCAGACACGTTGGCAATaGTCAGGAGGCTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCQTRWQ*SGGCCG
Trigger: TCCACAGCAGCCTCCTGACCATTGCCAACGTGTCTG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCAGCCCCACGGAGTGTaGGGTCAGACTCACAACCTT +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGQPHGV*GQTHNL
Trigger: AAGGTTGTGAGTCTGACCCCACACTCCGTGGGGCTG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGATGCAGAACCTCTGTaGCAGGCCCCCATCAAAGCC +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSDAEPL*QAPIKA
Trigger: GGCTTTGATGGGGGCCTGCCACAGAGGTTCTGCATC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCACATAGTGGAACCCTaGAGTCCCCAGGGCCTCATA +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLHIVEP*SPQGLI
Trigger: TATGAGGCCCTGGGGACTCCAGGGTTCCACTATGTG...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGGTGGTGGCCTGGGGTaGTACGACATCCACATAGTG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGGGGLG*YDIHIV
Trigger: CACTATGTGGATGTCGTACCACCCCAGGCCACCACC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGGCTGGTGGAGACCTaGGGTAGTGATGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNERLVET*GSDGKL
Trigger: CAGCTTCCCATCACTACCCCAGGTCTCCACCAGCCT...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGTCTCCAGAAGGCTGGTaGAGACCTGGGGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRSPEGW*RPGVVM
Trigger: CATCACTACCCCAGGTCTCCACCAGCCTTCTGGAGA...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGGGTTCTCCAGAAGGCTaGTGGAGACCTGGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGGSPEG*WRPGVV
Trigger: CACTACCCCAGGTCTCCACCAGCCTTCTGGAGAACC...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGGCTCTGTGGGCAGCTaGTCTTCAGGTTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRGSVGS*SSGSPE
Trigger: TTCTGGAGAACCTGAAGACCAGCTGCCCACAGAGCC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCTGAAGGTGGCTCTGTaGGCAGCTGGTCTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSALKVAL*AAGLQV
Trigger: AACCTGAAGACCAGCTGCCCACAGAGCCACCTTCAG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCTGAAGGTGGCTCTGTaGGCAGCTGGTCTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCLKVAL*AAGLQV
Trigger: AACCTGAAGACCAGCTGCCCACAGAGCCACCTTCAG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCGTGTCTTCAGGCCAGTaGAGGTCCCAGGGTCCCATC +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTVSSGQ*RSQGPI
Trigger: GATGGGACCCTGGGACCTCCACTGGCCTGAAGACAC...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATGCCATCCTCCCACCTTaGCCTCCCCAAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNAILPP*PPQVLG
Trigger: TCCCAACACTTGGGGAGGCCAAGGTGGGAGGATGGC...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGCAACTGCCTATTATCTaGGCTCCGGGGTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMQLPII*APGCHP
Trigger: AGGGTGACACCCCGGAGCTCAGATAATAGGCAGTTG...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGCAACTGCCTATTATCTaGGCTCCGGGGTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEQLPII*APGCHP
Trigger: AGGGTGACACCCCGGAGCTCAGATAATAGGCAGTTG...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTAACATTCACGGTGAATaGGGCCTTGATGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERANIHGE*GLDGGL
Trigger: GAGGCCCCCATCAAGGCCTCATTCACCGTGAATGTT...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGCGACTGGACTTGCTaGCACAGGAGAGTGTCACGT +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSGDWTC*HRRVSR
Trigger: ACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCC...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTTTGGACATGGAGATGTaGCCGCCATGCAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERALDMEM*PPCSPS
Trigger: GGATGGACTGCATGGCGGTCACATCTCCATGTCCAA...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGAGTCCTTGTACCACATaGGGGAGGGCTCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMRESPCTT*GRALGC
Trigger: GCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACT...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGACGGTACAGTACGTTaGGGCGATAGAAGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRDGTVR*GDRRSS
Trigger: TGAGCTCCTTCTATCGCCTCAACGTACTGTACCGTC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTTGGTGGCTGTACATGTaGAGAGGGCGTAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAWWLYM*RGRNPG
Trigger: CCCAGGATTACGCCCTCTTCACATGTACAGCCACCA...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCTCATATTCGTTCCTaGCTCGGTCCTCTTCCGACC +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAPHIRS*LGPLPT
Trigger: GGTCGGAAGAGGACCGAGTCAGGAACGAATATGAGG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATGTCAGCCCTGCTCTCTaGCCCAGCTTGAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNVSPAL*PSLSSF
Trigger: GAATGAGCTCAAGCTGGGTCAGAGAGCAGGGCTGAC...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGCTCCATGTCCTCTCCTaGCACCAAGTCCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMLHVLS*HQVPLG
Trigger: ACCCAAAGGGACTTGGTGTCAGGAGAGGACATGGAG...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTTTGACCACGTACTCCTaGCCAGCTACCCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSLTTYS*PATQVT
Trigger: GGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAA...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAATGGTGATGTCAGGTaGTGGCTTCGCGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMNGDVR*WLRVPR
Trigger: TCTGGGGACGCGAAGCCAGCACCTGACATCACCATT...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCACAGTGAAGAGTTTCTaGTGGGAGCCCTCGTTCACG +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETTVKSF*WEPSFT
Trigger: CGTGAACGAGGGCTCCCAGCAGAAACTCTTCACTGT...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGCCCCATTGTCCACAATaGACTGGTAAGCGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEPHCPQ*TGKRQP
Trigger: AGGCTGGCGCTTACCAGTGCATTGTGGACAATGGGG...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGTACCTCGGGAAGCCTaGGATCCTGGGGTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPVPREA*DPGVGA
Trigger: GGCCCCGACCCCAGGATCCCAGGCTTCCCGAGGTAC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGGCCTCGATGTGCAGGTaGAATTCACCTCTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNEASMCR*NSPLAG
Trigger: CCCTGCTAGAGGTGAATTCCACCTGCACATCGAGGC...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGCCTCGATGTGCAGGTaGAATTCACCTCTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERAASMCR*NSPLAG
Trigger: CCCTGCTAGAGGTGAATTCCACCTGCACATCGAGGC...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGTGGGAGGAACCAGGATaGAGAGGATCACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERWEEPG*RGSLWE
Trigger: CTCCCAGAGTGATCCTCTCCATCCTGGTTCCTCCCA...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGTGGGAGGAACCAGGATaGAGAGGATCACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMWEEPG*RGSLWE
Trigger: CTCCCAGAGTGATCCTCTCCATCCTGGTTCCTCCCA...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGTCAGCCACTGCAGTGTaGCTAAGGGATTACCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNESATAV*LRDYPL
Trigger: GAGGGGGTAATCCCTTAGCCACACTGCAGTGGCTGA...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGCCGGGAGGATGGGATTaGCATCGACAGTGCAGACTA +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERPGGWD*HRQCRL
Trigger: TAGTCTGCACTGTCGATGCCAATCCCATCCTCCCGG...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCGCCCCGTTGGTCCCCTaGATATCTTCTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAAPLVP*ISSPCH
Trigger: ATGACATGGAGAAGATATCCAGGGGACCAACGGGGC...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCGCCCCGTTGGTCCCCTaGATATCTTCTCCATGTCAT +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETAPLVP*ISSPCH
Trigger: ATGACATGGAGAAGATATCCAGGGGACCAACGGGGC...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTATGTGCTCCGTGTACCTaGGATCTTGGAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVCAPCT*DLGDPE
Trigger: CTCTGGATCTCCAAGATCCCAGGTACACGGAGCACA...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCCAGCCCCACGGAGTGTaGGGTCAGACTCACAACCTT +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTQPHGV*GQTHNL
Trigger: AAGGTTGTGAGTCTGACCCCACACTCCGTGGGGCTG...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGGGTGGTGGCCTGGGGTaGTACGACATCCACATAGTG +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREGGGLG*YDIHIV
Trigger: CACTATGTGGATGTCGTACCACCCCAGGCCACCACC...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGGTGAAGGTGGTGGCCTaGGGTGGTACGACATCCACA +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREVKVVA*GGTTST
Trigger: TGTGGATGTCGTACCACCCCAGGCCACCACCTTCAC...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTAGTGATGGGAAGCTaGGTCCCTTTGTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGVVMGS*VPLSAS
Trigger: ACTGGCTGACAAAGGGACCCAGCTTCCCATCACTAC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGTAGTGATGGGAAGCTaGGTCCCTTTGTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVVVMGS*VPLSAS
Trigger: ACTGGCTGACAAAGGGACCCAGCTTCCCATCACTAC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTTCTCCAGAAGGCTGGTaGAGACCTGGGGTAGTGATG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERASPEGW*RPGVVM
Trigger: CATCACTACCCCAGGTCTCCACCAGCCTTCTGGAGA...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGGGCTCTGTGGGCAGCTaGTCTTCAGGTTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQGSVGS*SSGSPE
Trigger: TTCTGGAGAACCTGAAGACCAGCTGCCCACAGAGCC...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGCGCTCTCCTGTCCACTaGCTCTCCTCATATTCGTTC +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRRSPVH*LSSYSF
Trigger: GAACGAATATGAGGAGAGCCAGTGGACAGGAGAGCG...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGCCACCTGCGTCTGTCTaGCTTTCTCTGGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREPPASV*LSLGPS
Trigger: AGAGGGACCCAGAGAAAGCCAGACAGACGCAGGTGG...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGTCAACCCTCCTCTCATaGCCCCAGGAAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMSTLLS*PQETSA
Trigger: AGCAGAGGTTTCCTGGGGCCATGAGAGGAGGGTTGA...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCCACTCAGGAGAATGGTaGTGTCAGGTGCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTHSGEW*CQVLAS
Trigger: CGAAGCCAGCACCTGACATCACCATTCTCCTGAGTG...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGACGGTACAGTACGTTaGGGCGATAGAAGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMDGTVR*GDRRSS
Trigger: TGAGCTCCTTCTATCGCCTCAACGTACTGTACCGTC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGAATGGTGATGTCAGGTaGTGGCTTCGCGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMRENGDVR*WLRVPR
Trigger: TCTGGGGACGCGAAGCCAGCACCTGACATCACCATT...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGACAGTGAAGAGTTTCTaGTGGGAGCCCTCGTTCACG +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERTVKSF*WEPSFT
Trigger: CGTGAACGAGGGCTCCCAGCAGAAACTCTTCACTGT...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATCCCTGGTGGTATGTGTaGTCCGTGTACCTGGGATCT +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNPWWYV*SVYLGS
Trigger: AGATCCCAGGTACACGGAGCACACATACCACCAGGG...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCTGTCTTCTCTGAGATaGCTGAAGGTGGCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERALSSLR*LKVALW
Trigger: CCACAGAGCCACCTTCAGGCATCTCAGAGAAGACAG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353632.6
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATGCGGTAATACGGCTCTaGCTCTGTTGTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNAVIRL*LCCADR
Trigger: ACGGTCAGCACAACAGAGGCAGAGCCGTATTACCGC...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCAAGCCAACCCCAGGATaGACCTTGTTTCTACTCTGG +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLKPTPG*TLFLLW
Trigger: CCAGAGTAGAAACAAGGTGCATCCTGGGGTTGGCTT...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGTCAGCAGGAGCAGCTTaGGAGGAACCAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMRESAGAA*EEPGWR
Trigger: TCTCCATCCTGGTTCCTCCCAAGCTGCTCCTGCTGA...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGTGAAGAGTTTCTGCTaGGAGCCCTCGTTCACGTTT +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVVKSFC*EPSFTF
Trigger: AAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCAC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGATGACAGGGGGTCCTaGAGGGAACAGAACATTCAC +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERDDRGS*REQNIH
Trigger: GTGAATGTTCTGTTCCCTCCAGGACCCCCTGTCATC...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGCCAGGAATGTCAGGTTaGACATGGAGATGTGACCGC +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERPGMSG*TWRCDR
Trigger: GCGGTCACATCTCCATGTCCAACCTGACATTCCTGG...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGTGCTCCGTGTACCTaGGATCTTGGAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQCAPCT*DLGDPE
Trigger: CTCTGGATCTCCAAGATCCCAGGTACACGGAGCACA...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGCACATAGTGGAACCCTaGAGTCCCCAGGGCCTCATA +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREHIVEP*SPQGLI
Trigger: TATGAGGCCCTGGGGACTCCAGGGTTCCACTATGTG...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTACTGATGCTGACAAGTTaGATGTTGGTTTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVLMLTS*MLVWSE
Trigger: CTCGGACCAAACCAACATTCAACTTGTCAGCATCAG...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCTGATGCTGACAAGTTaGATGTTGGTTTGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLLMLTS*MLVWSE
Trigger: CTCGGACCAAACCAACATTCAACTTGTCAGCATCAG...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTCCTCATATTCGTTCCTaGCTCGGTCCTCTTCCGACC +
Preference number: 4 (lower is better)
Translates to: SHRTRQHFIFETTFTICPPHIRS*LGPLPT
Trigger: GGTCGGAAGAGGACCGAGTCAGGAACGAATATGAGG...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTATTCCTCTTGGATCCTaGTATGTGTCTTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCIPLGS*YVSSGQ
Trigger: CTGGCCTGAAGACACATATCAGGATCCAAGAGGAAT...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTACTCTGGTACCAGCTaGACCATCTCTGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQYSGTS*TISVTQ
Trigger: CTGAGTGACAGAGATGGTTCAGCTGGTACCAGAGTA...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCTCACAGGCCTCGATGTaGAGGTGGAATTCACCTCTA +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGSQASM*RWNSPL
Trigger: TAGAGGTGAATTCCACCTGCACATCGAGGCCTGTGA...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGTCACAGACCAGCAACTaGCTATTATCTGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ERPVECKFLQVQDNGVERSQTSN*LLSELR
Trigger: CCGGAGCTCAGATAATAGGCAGTTGCTGGTCTGTGA...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTTCACAGACCAGCAACTaGCTATTATCTGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RPVECKFLQVQDNGVERASQTSN*LLSELR
Trigger: CCGGAGCTCAGATAATAGGCAGTTGCTGGTCTGTGA...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTACCATTCTTCAGCCACTaGAGTGTGGCTAAGGGATTA +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVPFFSH*SVAKGL
Trigger: TAATCCCTTAGCCACACTGCAGTGGCTGAAGAATGG...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCGATTGGCATCGACAGTaGAGACTATGTCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETDWHRQ*RLCPQN
Trigger: GTTCTGTGGACATAGTCTGCACTGTCGATGCCAATC...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCGATTGGCATCGACAGTaGAGACTATGTCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSADWHRQ*RLCPQN
Trigger: GTTCTGTGGACATAGTCTGCACTGTCGATGCCAATC...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAGTAAATTCCTGCAGGTaGAGGACAATGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVVNSCR*RTMGLR
Trigger: TCTCAACCCCATTGTCCTGCACCTGCAGGAATTTAC...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTaGAGGTGCAGGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQWSVNS*RCRTMG
Trigger: CCCCATTGTCCTGCACCTGCAGGAATTTACACTCCA...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTCTTTCAAGAAGGACCTaGAGCCCAGAGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SHRTRQHFIFETTFTICPLSRRT*SPESSR
Trigger: CCTGCTGGACTCTGGGCTGCAGGTCCTTCTTGAAAG...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGCTCTGCTGTGCTCTCTaGCACCGTAGATTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRLCCAL*HRRLVL
Trigger: CAAAACTAATCTACGGTGGCAGAGAGCACAGCAGAG...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGTGAAGAGTTTCTGCTaGGAGCCCTCGTTCACGTTT +
Preference number: 4 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMVKSFC*EPSFTF
Trigger: AAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCAC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGATGTCAGGTTGGACATaGAGATGTGACCGCCATGCA +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQMSGWT*RCDRHA
Trigger: TGCATGGCGGTCACATCTCCATGTCCAACCTGACAT...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATCCAGGAATGTCAGGTTaGACATGGAGATGTGACCGC +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNPGMSG*TWRCDR
Trigger: GCGGTCACATCTCCATGTCCAACCTGACATTCCTGG...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTACCTCAGTGGGGTCCTaGAGGGCACGGATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPTSVGS*RARMVG
Trigger: TCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGT...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGGGCGGCAGACACGTTaGCAATGGTCAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPGRQTR*QWSGGC
Trigger: GCAGCCTCCTGACCATTGCCAACGTGTCTGCCGCCC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCCGCTCTCCTGTCCACTaGCTCTCCTCATATTCGTTC +
Preference number: 4 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTRSPVH*LSSYSF
Trigger: GAACGAATATGAGGAGAGCCAGTGGACAGGAGAGCG...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGGACACCAAGTCCCTTTaGGTTTTATGGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRDTKSL*VLWSSP
Trigger: AGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTC...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTACTCCGCGTCATCGCTaGGGTCACAGGCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPTPRHR*GHRPRC
Trigger: ACATCGAGGCCTGTGACCTCAGCGATGACGCGGAGT...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTCCAGTCTCTCCCAGTTaGACATGCCCGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPPVSPS*TCPGGW
Trigger: CCATCCTCCCGGGCATGTTCAACTGGGAGAGACTGG...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGATTCCTCTTGGATCCTaGTATGTGTCTTCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQIPLGS*YVSSGQ
Trigger: CTGGCCTGAAGACACATATCAGGATCCAAGAGGAAT...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAGCCCTCGTTCACGTTTaGAGAGATGTCAGATATTGT +
Preference number: 4 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVALVHV*RDVRYC
Trigger: ACAATATCTGACATCTCTGCAAACGTGAACGAGGGC...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGCCCTCGTTCACGTTTaGAGAGATGTCAGATATTGT +
Preference number: 4 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVALVHV*RDVRYC
Trigger: ACAATATCTGACATCTCTGCAAACGTGAACGAGGGC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCTCATCATACAAGTaGCCAGGGAAGGCCATATCC +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMRETSSYK*PGKAIS
Trigger: GGATATGGCCTTCCCTGGGCACTTGTATGATGAGGT...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATACCTCATCATACAAGTaGCCAGGGAAGGCCATATCC +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNTSSYK*PGKAIS
Trigger: GGATATGGCCTTCCCTGGGCACTTGTATGATGAGGT...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGTAAATTCCTGCAGGTaGAGGACAATGGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSVNSCR*RTMGLR
Trigger: TCTCAACCCCATTGTCCTGCACCTGCAGGAATTTAC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTCTCCCATGCCTTTTTaGAGTCAACCCTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQSPMPF*SQPSSH
Trigger: ATGAGAGGAGGGTTGACTGCAAAAAGGCATGGGAGA...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATATGTCAGGTTGGACATaGAGATGTGACCGCCATGCA +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNMSGWT*RCDRHA
Trigger: TGCATGGCGGTCACATCTCCATGTCCAACCTGACAT...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTTTGAGACGACGTTTACAATCTGCCCTGTCCTTTTGGAGAAGTTTAGTTTCTGGCGGAGCCTTTGAATaGGGCTCTCCGGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FLRRRLQSALSFWRSLVSGGAFE*GSPGWG
Trigger: GCCCCACCCCGGAGAGCCCCATTCAAAGGCTCCGCC...AGAAACTAAACTTCTCCAAAAGGACAGGGCAGATTGTAAACGTCGTCTCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTaGAGTGTAAATTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCNERDQ*SVNSCR
Trigger: CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATT...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCTCCCTTTGGGTTTTATaGAGCTCACCTAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGSLWVL*SSPNQL
Trigger: GAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGTCCCTTTGGGTTTTATaGAGCTCACCTAACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLWVLWSSPNQLGPGCNESLWVL*SSPNQL
Trigger: GAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA...CTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGACACCAAGTCCCTTTaGGTTTTATGGAGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSDTKSL*VLWSSP
Trigger: AGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGCCATGATCGCGGGATaGCACTTGCAGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPAMIAG*HLQKDA
Trigger: AGCGTCCTTCTGCAAGTGTCATCCCGCGATCATGGC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR TCA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGCCTCATCTTCACCTGTaGAACCTCGGGAATAAGACA +
Preference number: 4 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREPHLHL*NLGNKT
Trigger: TGTCTTATTCCCGAGGTTTCACAGGTGAAGATGAGG...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTTCTTGTTCTCAGTCTaGGATGCAGATCCCAAGATA +
Preference number: 4 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRFLFSV*DADPKI
Trigger: TATCTTGGGATCTGCATCCCAGACTGAGAACAAGAA...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCTCAATCCACAGTTTCTaGGCGGGATATTTTACGTTC +
Preference number: 4 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSASIHSF*AGYFTF
Trigger: GAACGTAAAATATCCCGCCCAGAAACTGTGGATTGA...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGATGCAGAACCTCTGTaGCAGGCCCCCATCAAAGCC +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPDAEPL*QAPIKA
Trigger: GGCTTTGATGGGGGCCTGCCACAGAGGTTCTGCATC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGGTTCTCCAGAAGGCTaGTGGAGACCTGGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPGSPEG*WRPGVV
Trigger: CACTACCCCAGGTCTCCACCAGCCTTCTGGAGAACC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCAATGAGAGAGACCAGTaGAGTGTAAATTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGNERDQ*SVNSCR
Trigger: CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATT...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
3UTR CAA 72 bp TATTTCCAACACCTCAGAAAGTTCTCCCATGCCTTTTaGCAGTCAACCCTCCTCTCATGGCCCCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: YFQHLRKFSHAF*QSTLLSWPQET
Trigger: GGTTTCCTGGGGCCATGAGAGGAGGGTTGACTGCAAAAAGGCATGGGAGAACTTTCTGAGGTGTTGGAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATACGACGTTTACAATCTaGCCTGTCCTTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNTTFTI*PVLLEK
Trigger: CTTCTCCAAAAGGACAGGGCAGATTGTAAACGTCGT...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCGTCATAGATTCCTCTTaGATCCTGATATGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETVIDSS*ILICVF
Trigger: GAAGACACATATCAGGATCCAAGAGGAATCTATGAC...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGTCATAGATTCCTCTTaGATCCTGATATGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRVIDSS*ILICVF
Trigger: GAAGACACATATCAGGATCCAAGAGGAATCTATGAC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR TCA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCGTCTTTCCCCACTTCTaGAAACTTTACTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGVFPHF*KLYFMK
Trigger: CTTCATGAAGTAAAGTTTTCAGAAGTGGGGAAAGAC...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTTTGAGACGACGTTTACAATCTGCCCTGTCCTTTTGGAGAAGTTTAGTTTCTCCATCTTTGGCCCATTaGACCGCACTGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FLRRRLQSALSFWRSLVSPSLAH*TALPGV
Trigger: CACCCCTGGCAGTGCGGTGCAATGGGCCAAAGATGG...AGAAACTAAACTTCTCCAAAAGGACAGGGCAGATTGTAAACGTCGTCTCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTGATGACAGGGGGTCCTaGAGGGAACAGAACATTCAC +
Preference number: 4 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPDDRGS*REQNIH
Trigger: GTGAATGTTCTGTTCCCTCCAGGACCCCCTGTCATC...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTTCTTGTTCTCAGTCTaGGATGCAGATCCCAAGATA +
Preference number: 4 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNFLFSV*DADPKI
Trigger: TATCTTGGGATCTGCATCCCAGACTGAGAACAAGAA...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CCA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGATCAATCCACAGTTTCTaGGCGGGATATTTTACGTTC +
Preference number: 4 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERSIHSF*AGYFTF
Trigger: GAACGTAAAATATCCCGCCCAGAAACTGTGGATTGA...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR GCA 90 bp TTTTTGAGACGACGTTTACAATCTGCCCTGTCCTTTTGGAGAAGTTTAGTTTCTGCTCTCGGGAGAAGGTaGTCCCAGATTTCTCCACGC +
Preference number: 4 (lower is better)
Translates to: FLRRRLQSALSFWRSLVSALGRR*SQISPR
Trigger: GCGTGGAGAAATCTGGGAGCACCTTCTCCCGAGAGC...AGAAACTAAACTTCTCCAAAAGGACAGGGCAGATTGTAAACGTCGTCTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CCA 90 bp TTTTTGAGACGACGTTTACAATCTGCCCTGTCCTTTTGGAGAAGTTTAGTTTCTGTGGGGTGCTCCACCTaGGGGGCAAATCTGACAACA +
Preference number: 4 (lower is better)
Translates to: FLRRRLQSALSFWRSLVSVGCST*GANLTT
Trigger: TGTTGTCAGATTTGCCCCCCAGGTGGAGCACCCCAC...AGAAACTAAACTTCTCCAAAAGGACAGGGCAGATTGTAAACGTCGTCTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS TCA 90 bp TCGCGGAGCTCGGCGCTGTGGGCGCGGCAGGTCACGCGCTGGCCATaGTCGCGGGATGACACTTGCAGAAGGACGCTCCTGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SRSSALWARQVTRWP*SRDDTCRRTLLAAA
Trigger: CGCCGCCGCCAGGAGCGTCCTTCTGCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGACCTGCCGCGCCCACAGCGCCGAGCTCCGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000585400.1
CDS GCA 90 bp GGCAGCAACGCCTCGCCCTGCTCCACCGCGGTCACCACCAGCACCTaGTCCCCCAGGAACTCTGGACGGTGGTTTCGCGGAGCTCGGCGC +
Preference number: 5 (lower is better)
Translates to: GSNASPCSTAVTTST*SPRNSGRWFRGARR
Trigger: GCGCCGAGCTCCGCGAAACCACCGTCCAGAGTTCCTGGGGGAGCAGGTGCTGGTGGTGACCGCGGTGGAGCAGGGCGAGGCGTTGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS TCA 90 bp GGCGCTGTGGGCGCGGCAGGTCACGCGCTGGCCATGATCGCGGGATaGCACTTGCAGAAGGACGCTCCTGGCGGCGGCGGAGCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: GAVGAAGHALAMIAG*HLQKDAPGGGGAFE
Trigger: TTCAAAGGCTCCGCCGCCGCCAGGAGCGTCCTTCTGCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGACCTGCCGCGCCCACAGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000585400.1
CDS GCA 90 bp GGGATTACCCCCTCGGGCCACGCACGGCAGCTCCAAGCTCTGTCCTaGCCGCACGTGCCCCTCATCCAGGCCTGGCCACTCGATGACAGG +
Preference number: 5 (lower is better)
Translates to: GITPSGHARQLQALS*PHVPLIQAWPLDDR
Trigger: CCTGTCATCGAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACAGAGCTTGGAGCTGCCGTGCGTGGCCCGAGGGGGTAATCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp CCAGCACCAGCTCTCGGGAGAAGGTGCTCCCAGATTTCTCCACGCTaGCGAGATGCACGCGCCGCGACTCCTGCGGCAGCCGCGACTCGG +
Preference number: 5 (lower is better)
Translates to: PAPALGRRCSQISPR*RDARAATPAAAATR
Trigger: CCGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTGGGAGCACCTTCTCCCGAGAGCTGGTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp GGCCTCACGGTCATCACCAGCACACTGCGGGCCACCGCCTGGGTGTaGTCTGTGCCCCACGCTGTGGACACCGGCTGGCCATTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GLTVITSTLRATAWV*SVPHAVDTGWPFFS
Trigger: GCTGAAGAATGGCCAGCCGGTGTCCACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGACCGTGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp CTCCCAGATTTCTCCACGCTGCCGAGATGCACGCGCCGCGACTCCTaGGGCAGCCGCGACTCGGTCACGGTGCGCGAGTCCTTGTACCAC +
Preference number: 5 (lower is better)
Translates to: LPDFSTLPRCTRRDS*GSRDSVTVRESLYH
Trigger: GTGGTACAAGGACTCGCGCACCGTGACCGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp AGCTCTCGGGAGAAGGTGCTCCCAGATTTCTCCACGCTGCCGAGATaGACGCGCCGCGACTCCTGCGGCAGCCGCGACTCGGTCACGGTG +
Preference number: 5 (lower is better)
Translates to: SSREKVLPDFSTLPR*TRRDSCGSRDSVTV
Trigger: CACCGTGACCGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTGGGAGCACCTTCTCCCGAGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp GGTTCCTTGGGTGGGTGTGGTTTCCATGGTGGGCGGGGCTCACAGTaGACGTCCAGCCGCAGCCGCGCTTCCGCGGTGCCCTCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: GSLGGCGFHGGRGSQ*TSSRSRASAVPSEF
Trigger: GAACTCTGAGGGCACCGCGGAAGCGCGGCTGCGGCTGGACGTGCACTGTGAGCCCCGCCCACCATGGAAACCACACCCACCCAAGGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS GCA 90 bp GCTGCGCTCCATGGTCTTCTGGCCTCACGGTCATCACCAGCACACTaGGGGCCACCGCCTGGGTGTGCTCTGTGCCCCACGCTGTGGACA +
Preference number: 5 (lower is better)
Translates to: AALHGLLASRSSPAH*GPPPGCALCPTLWT
Trigger: TGTCCACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp TCTTCTGGCCTCACGGTCATCACCAGCACACTGCGGGCCACCGCCTaGGTGTGCTCTGTGCCCCACGCTGTGGACACCGGCTGGCCATTC +
Preference number: 5 (lower is better)
Translates to: SSGLTVITSTLRATA*VCSVPHAVDTGWPF
Trigger: GAATGGCCAGCCGGTGTCCACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGACCGTGAGGCCAGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp CACGCTGTTGTGGGCCTCGCAGCTGAGCTGCGCTCCATGGTCTTCTaGCCTCACGGTCATCACCAGCACACTGCGGGCCACCGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: HAVVGLAAELRSMVF*PHGHHQHTAGHRLG
Trigger: ACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp CCTGCAGACACGCTGTTGTGGGCCTCGCAGCTGAGCTGCGCTCCATaGTCTTCTGGCCTCACGGTCATCACCAGCACACTGCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: PADTLLWASQLSCAP*SSGLTVITSTLRAT
Trigger: GGTGGCCCGCAGTGTGCTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp CTCGGTCACGGTGCGCGAGTCCTTGTACCACATGAGGGAGGGCTCTaGGTTGCCCCCGATAGCCAAACACACCAGCCTCACCCGGGTCCC +
Preference number: 5 (lower is better)
Translates to: LGHGARVLVPHEGGL*VAPDSQTHQPHPGP
Trigger: GGGACCCGGGTGAGGCTGGTGTGTTTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACTCGCGCACCGTGACCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 90 bp CGTGCTCCTGGGTCCCTGCAGACACGCTGTTGTGGGCCTCGCAGCTaGGCTGCGCTCCATGGTCTTCTGGCCTCACGGTCATCACCAGCA +
Preference number: 5 (lower is better)
Translates to: RAPGSLQTRCCGPRS*AALHGLLASRSSPA
Trigger: TGCTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp AGGGGGAAAGGTGACCTGCAGTGTGATGCCGTGCTCCTGGGTCCCTaGAGACACGCTGTTGTGGGCCTCGCAGCTGAGCTGCGCTCCATG +
Preference number: 5 (lower is better)
Translates to: RGKGDLQCDAVLLGP*RHAVVGLAAELRSM
Trigger: CATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCACACTGCAGGTCACCTTTCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp ACTCTGGGAGACACGAGCTCGGGCCCCATCTCAGAGCGGCCGACCTaGCACTCATACTCCGCGTCATCGCTGAGGTCACAGGCCTCGATG +
Preference number: 5 (lower is better)
Translates to: TLGDTSSGPISERPT*HSYSASSLRSQASM
Trigger: CATCGAGGCCTGTGACCTCAGCGATGACGCGGAGTATGAGTGCCAGGTCGGCCGCTCTGAGATGGGGCCCGAGCTCGTGTCTCCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp TGCAGTGTGATGCCGTGCTCCTGGGTCCCTGCAGACACGCTGTTGTaGGCCTCGCAGCTGAGCTGCGCTCCATGGTCTTCTGGCCTCACG +
Preference number: 5 (lower is better)
Translates to: CSVMPCSWVPADTLL*ASQLSCAPWSSGLT
Trigger: CGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCACACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp TGCGTGGACGCGCTGAGCTGTCCAGCCTTGCACGTGAACTTGGCCTaGTTGTCCGACGGCCCTGTGACCAGCACCAGCTCTCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: CVDALSCPALHVNLA*LSDGPVTSTSSREK
Trigger: CTTCTCCCGAGAGCTGGTGCTGGTCACAGGGCCGTCGGACAACCAGGCCAAGTTCACGTGCAAGGCTGGACAGCTCAGCGCGTCCACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp ATGGGGGCCTCCAGTGCTGGGCTAGACGCCTCACAGACCAGCAACTaGCTATTATCTGAGCTCCGGGGTGTCACCCTGGCTGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: MGASSAGLDASQTSN*LLSELRGVTLAVAS
Trigger: GGAGGCCACAGCCAGGGTGACACCCCGGAGCTCAGATAATAGGCAGTTGCTGGTCTGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp GACGGAGCAGCCGTCGTGCTGGAGGCGCCACCCCATTGTCCACAATaGACTGGTAAGCGCCAGCCTGGGCCAGTTTGGCATGGTGAATCC +
Preference number: 5 (lower is better)
Translates to: DGAAVVLEAPPHCPQ*TGKRQPGPVWHGES
Trigger: GGATTCACCATGCCAAACTGGCCCAGGCTGGCGCTTACCAGTGCATTGTGGACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp CAGCTCCAAGCTCTGTCCTGCCCGCACGTGCCCCTCATCCAGGCCTaGCCACTCGATGACAGGGGGTCCTGGAGGGAACAGAACATTCAC +
Preference number: 5 (lower is better)
Translates to: QLQALSCPHVPLIQA*PLDDRGSWREQNIH
Trigger: GTGAATGTTCTGTTCCCTCCAGGACCCCCTGTCATCGAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACAGAGCTTGGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp ATGGCACTAGGGGGAAAGGTGACCTGCAGTGTGATGCCGTGCTCCTaGGTCCCTGCAGACACGCTGTTGTGGGCCTCGCAGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: MALGGKVTCSVMPCS*VPADTLLWASQLSC
Trigger: GCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCACACTGCAGGTCACCTTTCCCCCTAGTGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp TACACCGCGGCTGGGACTTCCAGAACGGGAGGGTTCCAGGATGGGTaGCTATCCCTGGGTGGGCGGAGCTCCCACAATGAGGAGACTCCA +
Preference number: 5 (lower is better)
Translates to: YTAAGTSRTGGFQDG*LSLGGRSSHNEETP
Trigger: TGGAGTCTCCTCATTGTGGGAGCTCCGCCCACCCAGGGATAGCCACCCATCCTGGAACCCTCCCGTTCTGGAAGTCCCAGCCGCGGTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp TCTCTAGTGGGAGGGGTTCCGCAGTGGGCGTGGTTACACCGCGGCTaGGACTTCCAGAACGGGAGGGTTCCAGGATGGGTGGCTATCCCT +
Preference number: 5 (lower is better)
Translates to: SLVGGVPQWAWLHRG*DFQNGRVPGWVAIP
Trigger: AGGGATAGCCACCCATCCTGGAACCCTCCCGTTCTGGAAGTCCCAGCCGCGGTGTAACCACGCCCACTGCGGAACCCCTCCCACTAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp GTTCACCTCAGTGGGGTCCTGGAGGGCACGGATGGTGGGAGCATCTaGTGGAAGGCAGAGGCTTGGGGAAGACACTTGGGCCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: VHLSGVLEGTDGGSI*WKAEAWGRHLGPDR
Trigger: CCTGTCTGGGCCCAAGTGTCTTCCCCAAGCCTCTGCCTTCCACCAGATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS-3UTR CAA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGCCGCGGAAGGTCCAGTaGAAGGCCTCGGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRPRKVQ*KASGAG
Trigger: CCCCGCCCCCGAGGCCTTCAACTGGACCTTCCGCGG...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp GTTGACCACGTACTCCTGCCCAGCTACCCAGGTGACCATGGTGCCTaGCTCTGGGGTCAGCAGGAGCAGCTTGGGAGGAACCAGGATGGA +
Preference number: 5 (lower is better)
Translates to: VDHVLLPSYPGDHGA*LWGQQEQLGRNQDG
Trigger: TCCATCCTGGTTCCTCCCAAGCTGCTCCTGCTGACCCCAGAGGCAGGCACCATGGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp GGGCGTAATCCTGGGCGGCAGACACGTTGGCAATGGTCAGGAGGCTaGTGTGGACACCACCCTGGTGGTATGTGTGCTCCGTGTACCTGG +
Preference number: 5 (lower is better)
Translates to: GRNPGRQTRWQWSGG*CGHHPGGMCAPCTW
Trigger: CCAGGTACACGGAGCACACATACCACCAGGGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCTGCCGCCCAGGATTACGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp GCCAGCCTGGGCCAGTTTGGCATGGTGAATCCGCAGGCGCCCCGTTaGTCCCCTGGATATCTTCTCCATGTCATCCAGGCTCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: ASLGQFGMVNPQAPR*SPGYLLHVIQALVL
Trigger: GAGGACCAGAGCCTGGATGACATGGAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCCCAGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp CTATCCCTGGGTGGGCGGAGCTCCCACAATGAGGAGACTCCACAATaGGCAAGGTTCCTTGGGTGGGTGTGGTTTCCATGGTGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LSLGGRSSHNEETPQ*ARFLGWVWFPWWAG
Trigger: CCCCGCCCACCATGGAAACCACACCCACCCAAGGAACCTTGCCCATTGTGGAGTCTCCTCATTGTGGGAGCTCCGCCCACCCAGGGATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp ATTCCACACTGGGTCTCTCTAGTGGGAGGGGTTCCGCAGTGGGCGTaGTTACACCGCGGCTGGGACTTCCAGAACGGGAGGGTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: IPHWVSLVGGVPQWA*LHRGWDFQNGRVPG
Trigger: TCCTGGAACCCTCCCGTTCTGGAAGTCCCAGCCGCGGTGTAACCACGCCCACTGCGGAACCCCTCCCACTAGAGAGACCCAGTGTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp GCAGAGATTCCACACTGGGTCTCTCTAGTGGGAGGGGTTCCGCAGTaGGCGTGGTTACACCGCGGCTGGGACTTCCAGAACGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: AEIPHWVSLVGGVPQ*AWLHRGWDFQNGRV
Trigger: AACCCTCCCGTTCTGGAAGTCCCAGCCGCGGTGTAACCACGCCCACTGCGGAACCCCTCCCACTAGAGAGACCCAGTGTGGAATCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp CTTCCGTGTCTAGGCGGGCACCCTCTCTGGGCAGAGATTCCACACTaGGTCTCTCTAGTGGGAGGGGTTCCGCAGTGGGCGTGGTTACAC +
Preference number: 5 (lower is better)
Translates to: LPCLGGHPLWAEIPH*VSLVGGVPQWAWLH
Trigger: GTGTAACCACGCCCACTGCGGAACCCCTCCCACTAGAGAGACCCAGTGTGGAATCTCTGCCCAGAGAGGGTGCCCGCCTAGACACGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp CGACAGTGCAGACTATGTCCACAGAACCCCCGACGTTCACCTCAGTaGGGTCCTGGAGGGCACGGATGGTGGGAGCATCTGGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RQCRLCPQNPRRSPQ*GPGGHGWWEHLVEG
Trigger: GCCTTCCACCAGATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACGTCGGGGGTTCTGTGGACATAGTCTGCACTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS-3UTR CAA 90 bp GGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCGTGAGGGTCAGACCGTaGTCCTCCCGCCGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: GFYGAHLTSSAQAVMRETVRVRP*SSRRAR
Trigger: CCTGGCGCGGCGGGAGGACAACGGTCTGACCCTCAC...GGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCGCGGCGGCGGAGCCTTaGAATGGGGCTCTCCGGGGT +
Preference number: 5 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLAAAEP*NGALRG
Trigger: ACCCCGGAGAGCCCCATTCAAAGGCTCCGCCGCCGC...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCCGCGGAAGGTCCAGTaGAAGGCCTCGGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGPRKVQ*KASGAG
Trigger: CCCCGCCCCCGAGGCCTTCAACTGGACCTTCCGCGG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp ACACACCAGCCTCACCCGGGTCCCAGCCCGGAGCTTCTGGCCCTCTaGGGGACCCTCAATCCACAGTTTCTGGGCGGGATATTTTACGTT +
Preference number: 5 (lower is better)
Translates to: THQPHPGPSPELLAL*GTLNPQFLGGIFYV
Trigger: AACGTAAAATATCCCGCCCAGAAACTGTGGATTGAGGGTCCCCCAGAGGGCCAGAAGCTCCGGGCTGGGACCCGGGTGAGGCTGGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CCA 90 bp CGACAGTGCAGACTATGTCCACAGAACCCCCGACGTTCACCTCAGTaGGGTCCTGGAGGGCACGGATGGTGGGAGCATAGTGCACGTCCA +
Preference number: 5 (lower is better)
Translates to: RQCRLCPQNPRRSPQ*GPGGHGWWEHSARP
Trigger: TGGACGTGCACTATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACGTCGGGGGTTCTGTGGACATAGTCTGCACTGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp CACAATGAGGAGACTCCACAATGGGCAAGGTTCCTTGGGTGGGTGTaGTTTCCATGGTGGGCGGGGCTCACAGTGCACGTCCAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: HNEETPQWARFLGWV*FPWWAGLTVHVQPQ
Trigger: CTGCGGCTGGACGTGCACTGTGAGCCCCGCCCACCATGGAAACCACACCCACCCAAGGAACCTTGCCCATTGTGGAGTCTCCTCATTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp CTGGGACTTCCAGAACGGGAGGGTTCCAGGATGGGTGGCTATCCCTaGGTGGGCGGAGCTCCCACAATGAGGAGACTCCACAATGGGCAA +
Preference number: 5 (lower is better)
Translates to: LGLPEREGSRMGGYP*VGGAPTMRRLHNGQ
Trigger: TTGCCCATTGTGGAGTCTCCTCATTGTGGGAGCTCCGCCCACCCAGGGATAGCCACCCATCCTGGAACCCTCCCGTTCTGGAAGTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp CAGACTATGTCCACAGAACCCCCGACGTTCACCTCAGTGGGGTCCTaGAGGGCACGGATGGTGGGAGCATCTGGTGGAAGGCAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: QTMSTEPPTFTSVGS*RARMVGASGGRQRL
Trigger: AAGCCTCTGCCTTCCACCAGATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACGTCGGGGGTTCTGTGGACATAGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS TCA 90 bp GTTCCAGGATGGGTGGCTATCCCTGGGTGGGCGGAGCTCCCACAATaGGGAGACTCCACAATGGGCAAGGTTCCTTGGGTGGGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: VPGWVAIPGWAELPQ*GDSTMGKVPWVGVV
Trigger: AACCACACCCACCCAAGGAACCTTGCCCATTGTGGAGTCTCCTCATTGTGGGAGCTCCGCCCACCCAGGGATAGCCACCCATCCTGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS-3UTR CAA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCCTGCAGACACGCTGTaGTGGGCCTCGCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLPADTL*WASQLS
Trigger: GCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGG...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATGTGAGGGTCAGACCGTaGTCCTCCCGCCGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNVRVRP*SSRRAR
Trigger: CCTGGCGCGGCGGGAGGACAACGGTCTGACCCTCAC...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGGCGGCGGCGGAGCCTTaGAATGGGGCTCTCCGGGGT +
Preference number: 5 (lower is better)
Translates to: FGFYGAHLTSSAQAVMREAAAEP*NGALRG
Trigger: ACCCCGGAGAGCCCCATTCAAAGGCTCCGCCGCCGC...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 90 bp AGCCCAGCCACCATCGTAGCAGAACCCGCGGGCGACTGGACTTGCTaGCACAGGAGAGTGTCACGTTCTTGTTCTCAGTCTGGGATGCAG +
Preference number: 5 (lower is better)
Translates to: SPATIVAEPAGDWTC*HRRVSRSCSQSGMQ
Trigger: CTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCGGGTTCTGCTACGATGGTGGCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS GCA 90 bp ATAATAATGGCACTAGGGGGAAAGGTGACCTGCAGTGTGATGCCGTaGTCCTGGGTCCCTGCAGACACGCTGTTGTGGGCCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: IIMALGGKVTCSVMP*SWVPADTLLWASQL
Trigger: CAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCACACTGCAGGTCACCTTTCCCCCTAGTGCCATTATTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp GGGCCAGTTTGGCATGGTGAATCCGCAGGCGCCCCGTTGGTCCCCTaGATATCTTCTCCATGTCATCCAGGCTCTGGTCCTCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: GPVWHGESAGAPLVP*ISSPCHPGSGPPHL
Trigger: AAGATGAGGAGGACCAGAGCCTGGATGACATGGAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCCCATCTTTGGCCCATaGCACCGCACTGCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAPIFGP*HRTARG
Trigger: ACCCCTGGCAGTGCGGTGCAATGGGCCAAAGATGGG...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGCCTGCAGACACGCTGTaGTGGGCCTCGCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSPADTL*WASQLS
Trigger: GCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGG...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCGCGGGCGACTGGACTaGCTGACACAGGAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCRGRLD*LTQESV
Trigger: GACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTACGGTGCGCGAGTCCTaGTACCACATGAGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCTVRES*YHMREG
Trigger: GCCCTCCCTCATGTGGTACAAGGACTCGCGCACCGT...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGAACTTGGCCTGGTaGTCCGACGGCCCTGTGACC +
Preference number: 5 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGVNLAW*SDGPVT
Trigger: GGTCACAGGGCCGTCGGACAACCAGGCCAAGTTCAC...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGGTGAACTTGGCCTGGTaGTCCGACGGCCCTGTGACC +
Preference number: 5 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRVNLAW*SDGPVT
Trigger: GGTCACAGGGCCGTCGGACAACCAGGCCAAGTTCAC...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTGCCTTGCACGTGAACTaGGCCTGGTTGTCCGACGGC +
Preference number: 5 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCALHVN*AWLSDG
Trigger: GCCGTCGGACAACCAGGCCAAGTTCACGTGCAAGGC...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGGCCTTGCACGTGAACTaGGCCTGGTTGTCCGACGGC +
Preference number: 5 (lower is better)
Translates to: GPGCNERDQWSVNSCRCRALHVN*AWLSDG
Trigger: GCCGTCGGACAACCAGGCCAAGTTCACGTGCAAGGC...CCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 90 bp CAGAATTGTGTGTGTAGCAGGGCTTATACAGTGGGCTCTCATTCCTaGCGGGAGCAGCTTCCGTGTCTAGGCGGGCACCCTCTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QNCVCSRAYTVGSHS*REQLPCLGGHPLWA
Trigger: TGCCCAGAGAGGGTGCCCGCCTAGACACGGAAGCTGCTCCCGTCAGGAATGAGAGCCCACTGTATAAGCCCTGCTACACACACAATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp TTTGTCCAAGTGAAAACGATGTTGGGGACACCTCGGGCACGGCAGTaGAGGGTGGCAGAACTGGTGCTGTCTCCAGCTGCAGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: FVQVKTMLGTPRARQ*RVAELVLSPAAATL
Trigger: TAAGGTGGCTGCAGCTGGAGACAGCACCAGTTCTGCCACCCTCCACTGCCGTGCCCGAGGTGTCCCCAACATCGTTTTCACTTGGACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp GCAGACACGTTGGCAATGGTCAGGAGGCTGCTGTGGACACCACCCTaGTGGTATGTGTGCTCCGTGTACCTGGGATCTTGGAGATCCAGA +
Preference number: 5 (lower is better)
Translates to: ADTLAMVRRLLWTPP*WYVCSVYLGSWRSR
Trigger: TCTGGATCTCCAAGATCCCAGGTACACGGAGCACACATACCACCAGGGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GAGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGCCCATCTTTGGCCCATaGCACCGCACTGCCAGGGGT +
Preference number: 5 (lower is better)
Translates to: ERPVECKFLQVQDNGVERPIFGP*HRTARG
Trigger: ACCCCTGGCAGTGCGGTGCAATGGGCCAAAGATGGG...CCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCACGGTGAATGAGGCCTaGATGGGGGCCTCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLTVNEA*MGASSA
Trigger: AGCACTGGAGGCCCCCATCAAGGCCTCATTCACCGT...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCGCGGGCGACTGGACTaGCTGACACAGGAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGRGRLD*LTQESV
Trigger: GACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCG...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGACGGTGCGCGAGTCCTaGTACCACATGAGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMTVRES*YHMREG
Trigger: GCCCTCCCTCATGTGGTACAAGGACTCGCGCACCGT...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCTGAGCTGTCCAGCCTaGCACGTGAACTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCLSCPA*HVNLAW
Trigger: CCAGGCCAAGTTCACGTGCAAGGCTGGACAGCTCAG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTCCCGGGAGGATGGGATaGGCATCGACAGTGCAGACT +
Preference number: 5 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCPGRMG*ASTVQT
Trigger: AGTCTGCACTGTCGATGCCAATCCCATCCTCCCGGG...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTACCCAGTCTCTCCCAGTaGAACATGCCCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SSPNQLGPGCNERDQWSVPSLSQ*NMPGRM
Trigger: CATCCTCCCGGGCATGTTCAACTGGGAGAGACTGGG...TACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGTCCGCAGGCGCCCCGTaGGTCCCCTGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGSAGAP*VPWISS
Trigger: AGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGA...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGTCCGCAGGCGCCCCGTaGGTCCCCTGGATATCTTCT +
Preference number: 5 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSSAGAP*VPWISS
Trigger: AGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGA...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGGAAGCTGGGTCCCTTaGTCAGCCAGTCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVGSWVP*SASPLS
Trigger: GGACAGTGGACTGGCTGACAAAGGGACCCAGCTTCC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 90 bp GAATGTTGGTTTGGTCCGAGCCAAGGGCGTTGGTGGCTGTACATGTaGAGAGGGCGTAATCCTGGGCGGCAGACACGTTGGCAATGGTCA +
Preference number: 5 (lower is better)
Translates to: ECWFGPSQGRWWLYM*RGRNPGRQTRWQWS
Trigger: TGACCATTGCCAACGTGTCTGCCGCCCAGGATTACGCCCTCTTCACATGTACAGCCACCAACGCCCTTGGCTCGGACCAAACCAACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp CTCCGGGGTGTCACCCTGGCTGTGGCCTCCACAGTGAAGAGTTTCTaGTGGGAGCCCTCGTTCACGTTTGCAGAGATGTCAGATATTGTC +
Preference number: 5 (lower is better)
Translates to: LRGVTLAVASTVKSF*WEPSFTFAEMSDIV
Trigger: GACAATATCTGACATCTCTGCAAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCACTGTGGAGGCCACAGCCAGGGTGACACCCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCAGGAGCAGCCCATCTTaGGCCCATTGCACCGCACTG +
Preference number: 5 (lower is better)
Translates to: SPDTKSLWVLWSSPNQLGRSSPS*AHCTAL
Trigger: CAGTGCGGTGCAATGGGCCAAAGATGGGCTGCTCCT...GCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGACGGTGAATGAGGCCTaGATGGGGGCCTCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGTVNEA*MGASSA
Trigger: AGCACTGGAGGCCCCCATCAAGGCCTCATTCACCGT...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp ACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAAGTTGACCGGCGGATaGCTGCTGACGCTGACGCAT +
Preference number: 5 (lower is better)
Translates to: TKSLWVLWSSPNQLGPGCKLTGG*LLTLTH
Trigger: ATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTT...ACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGATTGTCCCAGGACAAGTaGACCGGCGGATTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YGAHLTSSAQAVMRETSGLSQDK*TGGLLL
Trigger: CAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAA...TCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGTTGTCCCAGGACAAGTaGACCGGCGGATTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRLSQDK*TGGLLL
Trigger: CAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAA...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCCAAGTGAAAACGATGTaGGGGACACCTCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLQVKTM*GTPRAR
Trigger: CCGTGCCCGAGGTGTCCCCAACATCGTTTTCACTTG...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGGAAGCTGGGTCCCTTaGTCAGCCAGTCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: RPVECKFLQVQDNGVERAGSWVP*SASPLS
Trigger: GGACAGTGGACTGGCTGACAAAGGGACCCAGCTTCC...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp CTCCAAAAAGCAAGCGTGGAGATCCAGACCCTAATCCTGAGGTGCTaGATCCACAGTGGGCATGGTGCTGGTGCCTGCTTGGATGATCCT +
Preference number: 5 (lower is better)
Translates to: LQKASVEIQTLILRC*IHSGHGAGACLDDP
Trigger: AGGATCATCCAAGCAGGCACCAGCACCATGCCCACTGTGGATGCAGCACCTCAGGATTAGGGTCTGGATCTCCACGCTTGCTTTTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS CCA 90 bp GTCAGATATTGTCTGTCCACTCAGGAGAATGGTGATGTCAGGTGCTaGCTTCGCGTCCCCAGACACACAGTTGACCACGTACTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: VRYCLSTQENGDVRC*LRVPRHTVDHVLLP
Trigger: GGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGGACGCGAAGCCAGCACCTGACATCACCATTCTCCTGAGTGGACAGACAATATCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp TTCCAGAGTGTCCAAGTCTCCGGCCACCTGGTCATAGATTCCTCTTaGATCCTGATATGTGTCTTCAGGCCAGTGGAGGTCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: FQSVQVSGHLVIDSS*ILICVFRPVEVPGS
Trigger: GGACCCTGGGACCTCCACTGGCCTGAAGACACATATCAGGATCCAAGAGGAATCTATGACCAGGTGGCCGGAGACTTGGACACTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGCGCAGTGCGGATGCGTaGGCCAGGATCGTCACGTTA +
Preference number: 5 (lower is better)
Translates to: FGFYGAHLTSSAQAVMRERSADA*ARIVTL
Trigger: TAACGTGACGATCCTGGCCAACGCATCCGCACTGCG...CTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCCGCAGTGCGGATGCGTaGGCCAGGATCGTCACGTTA +
Preference number: 5 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTRSADA*ARIVTL
Trigger: TAACGTGACGATCCTGGCCAACGCATCCGCACTGCG...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGACCCGGGAGGATGGGATaGGCATCGACAGTGCAGACT +
Preference number: 5 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERPGRMG*ASTVQT
Trigger: AGTCTGCACTGTCGATGCCAATCCCATCCTCCCGGG...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATCCCAGTCTCTCCCAGTaGAACATGCCCGGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNPSLSQ*NMPGRM
Trigger: CATCCTCCCGGGCATGTTCAACTGGGAGAGACTGGG...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCAAGTGAAAACGATGTaGGGGACACCTCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RPVECKFLQVQDNGVERAQVKTM*GTPRAR
Trigger: CCGTGCCCGAGGTGTCCCCAACATCGTTTTCACTTG...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGTCCGAGCCAAGGGCGTaGGTGGCTGTACATGTGAAG +
Preference number: 5 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMSEPRA*VAVHVK
Trigger: CTTCACATGTACAGCCACCAACGCCCTTGGCTCGGA...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 90 bp GAGGTGCTGCATCCACAGTGGGCATGGTGCTGGTGCCTGCTTGGATaGTCCTTAAAGAAAGGTCCTGGGGGCTTTGGTTCATGGATCCTT +
Preference number: 5 (lower is better)
Translates to: EVLHPQWAWCWCLLG*SLKKGPGGFGSWIL
Trigger: AAGGATCCATGAACCAAAGCCCCCAGGACCTTTCTTTAAGGATCATCCAAGCAGGCACCAGCACCATGCCCACTGTGGATGCAGCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS GCA 90 bp CTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTaGAGGTGCAGGACAATGGGGTTGAGAGGGCTCTTACACCAGATG +
Preference number: 5 (lower is better)
Translates to: LGPGCNERDQWSVNS*RCRTMGLRGLLHQM
Trigger: CATCTGGTGTAAGAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 90 bp AGGGCCCCAGGTGGGAGGGATGTCTTAGGGGTTCCAGGAAAGTTATaGGTGTGGACACAATCTGCCCTTAATACCAAAGGGTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RAPGGRDVLGVPGKL*VWTQSALNTKGLEE
Trigger: CTCCTCCAACCCTTTGGTATTAAGGGCAGATTGTGTCCACACCCATAACTTTCCTGGAACCCCTAAGACATCCCTCCCACCTGGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 90 bp AAGAAGAGTGAACTCCTGGGTCTGAAGGAGAATGGGCTGGGGGCTTaGTCTCTGGTCCTGAGAGAGAAGGTGCCCAGACTTCTGGATCAA +
Preference number: 5 (lower is better)
Translates to: KKSELLGLKENGLGA*SLVLREKVPRLLDQ
Trigger: TTGATCCAGAAGTCTGGGCACCTTCTCTCTCAGGACCAGAGACCAAGCCCCCAGCCCATTCTCCTTCAGACCCAGGAGTTCACTCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS-3UTR CAA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTAGGAGCAGCCCATCTTaGGCCCATTGCACCGCACTG +
Preference number: 5 (lower is better)
Translates to: SHRTRQHFIFETTFTICPRSSPS*AHCTAL
Trigger: CAGTGCGGTGCAATGGGCCAAAGATGGGCTGCTCCT...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CAA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAAAGTTGACCGGCGGATaGCTGCTGACGCTGACGCAT +
Preference number: 5 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERKLTGG*LLTLTH
Trigger: ATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTT...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGATCCGAGCCAAGGGCGTaGGTGGCTGTACATGTGAAG +
Preference number: 5 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERSEPRA*VAVHVK
Trigger: CTTCACATGTACAGCCACCAACGCCCTTGGCTCGGA...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGCGGGGTCTCACTATGTaGGCCAGGTTGATCTCAGAC +
Preference number: 5 (lower is better)
Translates to: VLWSSPNQLGPGCNERDQRGLTM*ARLISD
Trigger: GTCTGAGATCAACCTGGCCAACATAGTGAGACCCCG...CTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS GCA 90 bp GATGTCAGATATTGTCTGTCCACTCAGGAGAATGGTGATGTCAGGTaGTGGCTTCGCGTCCCCAGACACACAGTTGACCACGTACTCCTG +
Preference number: 5 (lower is better)
Translates to: DVRYCLSTQENGDVR*WLRVPRHTVDHVLL
Trigger: CAGGAGTACGTGGTCAACTGTGTGTCTGGGGACGCGAAGCCAGCACCTGACATCACCATTCTCCTGAGTGGACAGACAATATCTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAAGGATGAGCGACTTCTaGAAGGTCTCCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVRMSDF*KVSLVK
Trigger: CTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCT...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATTCCTGCAGGAGCCCTCGTTCACGTTaGCAGAGATGTCAGATATTG +
Preference number: 5 (lower is better)
Translates to: QLGPGCNERDQWSVNSCRSPRSR*QRCQIL
Trigger: CAATATCTGACATCTCTGCAAACGTGAACGAGGGCT...CCTGCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGAGAGTGTCACGTTCTaGTTCTCAGTCTGGGATGCA +
Preference number: 5 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSESVTF*FSVWDA
Trigger: TGCATCCCAGACTGAGAACAAGAACGTGACACTCTC...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTGAGAGTGTCACGTTCTaGTTCTCAGTCTGGGATGCA +
Preference number: 5 (lower is better)
Translates to: RPVECKFLQVQDNGVERAESVTF*FSVWDA
Trigger: TGCATCCCAGACTGAGAACAAGAACGTGACACTCTC...AGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCTTCTTGAAGGTCTCCTaGGTGAAGGCTTCACTGAAG +
Preference number: 5 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSAFLKVS*VKASLK
Trigger: CTTCAGTGAAGCCTTCACCAAGGAGACCTTCAAGAA...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp GACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGCTCTTCTTGAAGGTCTCCTaGGTGAAGGCTTCACTGAAG +
Preference number: 5 (lower is better)
Translates to: DQWSVNSCRCRTMGLRGLFLKVS*VKASLK
Trigger: CTTCAGTGAAGCCTTCACCAAGGAGACCTTCAAGAA...GAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTTGAGAGGGAAGTTGAATGTTGGTTaGGTCCGAGCCAAGGGCGTT +
Preference number: 5 (lower is better)
Translates to: RDQWSVNSCRCRTMGLRGKLNVG*VRAKGV
Trigger: AACGCCCTTGGCTCGGACCAAACCAACATTCAACTT...CCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAAGTTGAATGTTGGTTaGGTCCGAGCCAAGGGCGTT +
Preference number: 5 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMKLNVG*VRAKGV
Trigger: AACGCCCTTGGCTCGGACCAAACCAACATTCAACTT...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAGCTGATGCTGACAAGTaGAATGTTGGTTTGGTCCGA +
Preference number: 5 (lower is better)
Translates to: PSPFGFYGAHLTSSAQAVADADK*NVGLVR
Trigger: TCGGACCAAACCAACATTCAACTTGTCAGCATCAGC...TACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCTCCATCTTTCTCTCCTaGTCTAAGCCGTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LLTPSPFGFYGAHLTSSASIFLS*SKPFSL
Trigger: GAGAGAGAACGGCTTAGACAAGGAGAGAAAGATGGA...GGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CAA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTAGCCATCCTCCCACCTaGGCCTCCCCAAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPSHPPT*ASPSVG
Trigger: CCCAACACTTGGGGAGGCCAAGGTGGGAGGATGGCT...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS GCA 90 bp GGCCTCCACAGTGAAGAGTTTCTGCTGGGAGCCCTCGTTCACGTTTaGAGAGATGTCAGATATTGTCTGTCCACTCAGGAGAATGGTGAT +
Preference number: 5 (lower is better)
Translates to: GLHSEEFLLGALVHV*RDVRYCLSTQENGD
Trigger: ATCACCATTCTCCTGAGTGGACAGACAATATCTGACATCTCTGCAAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCACTGTGGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 90 bp CTCTGTCTCTCTCTCTCTCTCTCTCTCAATCTCTATCTTCTCTCCTaGCACCCCTCACTCCTGCTCCTTGTCTCACTACTCACAGCCTTT +
Preference number: 5 (lower is better)
Translates to: LCLSLSLSLNLYLLS*HPSLLLLVSLLTAF
Trigger: AAAGGCTGTGAGTAGTGAGACAAGGAGCAGGAGTGAGGGGTGGCAGGAGAGAAGATAGAGATTGAGAGAGAGAGAGAGAGAGAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS CCA 90 bp CCAGGTGGGAGGGATGTCTTAGGGGTTCCAGGAAAGTTATGGGTGTaGACACAATCTGCCCTTAATACCAAAGGGTTGGAGGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: PGGRDVLGVPGKLWV*TQSALNTKGLEESS
Trigger: AGAACTCTCCTCCAACCCTTTGGTATTAAGGGCAGATTGTGTCCACACCCATAACTTTCCTGGAACCCCTAAGACATCCCTCCCACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS-3UTR CAA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTAGGATGAGCGACTTCTaGAAGGTCTCCTTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSRMSDF*KVSLVK
Trigger: CTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCT...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp TGTGCACCCGTGCAACCACCACCACAATCGTTATATAGAATATTTCCAACACCTCTGAGCTGTCCAGCCTaGCACGTGAACTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: CAPVQPPPQSLYRIFPTPLSCPA*HVNLAW
Trigger: CCAGGCCAAGTTCACGTGCAAGGCTGGACAGCTCAG...AGGTGTTGGAAATATTCTATATAACGATTGTGGTGGTGGTTGCACGGGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS GCA 90 bp CTTGCTGACACAGGAGAGTGTCACGTTCTTGTTCTCAGTCTGGGATaGAGATCCCAAGATAATAATGGCACTAGGGGGAAAGGTGACCTG +
Preference number: 5 (lower is better)
Translates to: LADTGECHVLVLSLG*RSQDNNGTRGKGDL
Trigger: CAGGTCACCTTTCCCCCTAGTGCCATTATTATCTTGGGATCTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CCA 90 bp CTGGACTTGCTGACACAGGAGAGTGTCACGTTCTTGTTCTCAGTCTaGGATGCAGATCCCAAGATAATAATGGCACTAGGGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LDLLTQESVTFLFSV*DADPKIIMALGGKV
Trigger: CACCTTTCCCCCTAGTGCCATTATTATCTTGGGATCTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS-3UTR CAA 90 bp TCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTGGAGTGTAAATAGCCCTCGTTCACGTTaGCAGAGATGTCAGATATTG +
Preference number: 5 (lower is better)
Translates to: SPNQLGPGCNERDQWSVNSPRSR*QRCQIL
Trigger: CAATATCTGACATCTCTGCAAACGTGAACGAGGGCT...ATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCATGTCCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCGCTGATGCTGACAAGTaGAATGTTGGTTTGGTCCGA +
Preference number: 5 (lower is better)
Translates to: PCPLLTPSPFGFYGAHLTADADK*NVGLVR
Trigger: TCGGACCAAACCAACATTCAACTTGTCAGCATCAGC...GGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGGACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp CCTCTCCTGACACCAAGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGACTATGTTGGCCAGGTaGATCTCAGACTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: PLLTPSPFGFYGAHLTSSTMLAR*ISDSFL
Trigger: AAGGAAAGAGTCTGAGATCAACCTGGCCAACATAGT...CGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACTTGGTGTCAGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS-3UTR CAA 90 bp TTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGACCAGTCAGAGATGTCAGATATaGTCTGTCCACTCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FYGAHLTSSAQAVMRETSQRCQI*SVHSGE
Trigger: TTCTCCTGAGTGGACAGACAATATCTGACATCTCTG...ACTGGTCTCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGTCCCTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGGGTCATAGATTCCTCTaGGATCCTGATATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: SPFGFYGAHLTSSAQAVMGHRFL*DPDMCL
Trigger: AAGACACATATCAGGATCCAAGAGGAATCTATGACC...CATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 90 bp GAGTCCTGGGATCTCCAACTTGCCATAATGGATTGTTCTGATTTCTaGGGAGCCAGGACAAGTTGGCGACCTTACTCCTCCAAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: ESWDLQLAIMDCSDF*GARTSWRPYSSKKQ
Trigger: TTGCTTTTTGGAGGAGTAAGGTCGCCAACTTGTCCTGGCTCCTCAGAAATCAGAACAATCCATTATGGCAAGTTGGAGATCCCAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS TCA 90 bp AATGGAAGAGTCCTGGGATCTCCAACTTGCCATAATGGATTGTTCTaGTTTCTGAGGAGCCAGGACAAGTTGGCGACCTTACTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: NGRVLGSPTCHNGLF*FLRSQDKLATLLLQ
Trigger: TTGGAGGAGTAAGGTCGCCAACTTGTCCTGGCTCCTCAGAAATCAGAACAATCCATTATGGCAAGTTGGAGATCCCAGGACTCTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS-3UTR CAA 90 bp CTTTGGGTTTTATGGAGCTCACCTAACCAGCTCGGCCCAGGCTGTAATGAGAGAGGTCATAGATTCCTCTaGGATCCTGATATGTGTCTT +
Preference number: 5 (lower is better)
Translates to: LWVLWSSPNQLGPGCNERGHRFL*DPDMCL
Trigger: AAGACACATATCAGGATCCAAGAGGAATCTATGACC...TCTCTCATTACAGCCTGGGCCGAGCTGGTTAGGTGAGCTCCATAAAACCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS-3UTR CAA 90 bp AGTCACCGCACCCGGCAGCATTTCATTTTTGAGACGACGTTTACAATCTGCCCTGGCAGCATTTCATTTTaGAGACGACGTTTACAATCT +
Preference number: 5 (lower is better)
Translates to: SHRTRQHFIFETTFTICPGSISF*RRRLQS
Trigger: AGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCC...AGGGCAGATTGTAAACGTCGTCTCAAAAATGAAATGCTGCCGGGTGCGGTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS GCA 72 bp CCCTCGGGCCACGCACGGCAGCTCCAAGCTCTGTCCTaGCCGCACGTGCCCCTCATCCAGGCCTGGCCACTC +
Preference number: 6 (lower is better)
Translates to: PSGHARQLQALS*PHVPLIQAWPL
Trigger: GAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACAGAGCTTGGAGCTGCCGTGCGTGGCCCGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp TTCTCCACGCTGCCGAGATGCACGCGCCGCGACTCCTaGGGCAGCCGCGACTCGGTCACGGTGCGCGAGTCC +
Preference number: 6 (lower is better)
Translates to: FSTLPRCTRRDS*GSRDSVTVRES
Trigger: GGACTCGCGCACCGTGACCGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GGTGGGTGTGGTTTCCATGGTGGGCGGGGCTCACAGTaGACGTCCAGCCGCAGCCGCGCTTCCGCGGTGCCC +
Preference number: 6 (lower is better)
Translates to: GGCGFHGGRGSQ*TSSRSRASAVP
Trigger: GGGCACCGCGGAAGCGCGGCTGCGGCTGGACGTGCACTGTGAGCCCCGCCCACCATGGAAACCACACCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp CCGCGCGGGTCACATTCCACAGATGCAGAGCCCCGCTaGACAGGATGCGATGCCGGGGGCCGCCCGCTGGAC +
Preference number: 6 (lower is better)
Translates to: PRGSHSTDAEPR*TGCDAGGRPLD
Trigger: GTCCAGCGGGCGGCCCCCGGCATCGCATCCTGTCCAGCGGGGCTCTGCATCTGTGGAATGTGACCCGCGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000585400.1
CDS TCA 72 bp GGCGCGGCAGGTCACGCGCTGGCCATGATCGCGGGATaGCACTTGCAGAAGGACGCTCCTGGCGGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: GAAGHALAMIAG*HLQKDAPGGGG
Trigger: TCCGCCGCCGCCAGGAGCGTCCTTCTGCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGACCTGCCGCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000585400.1
CDS GCA 72 bp GTCATCACCAGCACACTGCGGGCCACCGCCTGGGTGTaGTCTGTGCCCCACGCTGTGGACACCGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VITSTLRATAWV*SVPHAVDTGWP
Trigger: TGGCCAGCCGGTGTCCACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGCCCGCAGTGTGCTGGTGATGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp TCGGCGCTGTGGGCGCGGCAGGTCACGCGCTGGCCATaGTCGCGGGATGACACTTGCAGAAGGACGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SALWARQVTRWP*SRDDTCRRTLL
Trigger: CAGGAGCGTCCTTCTGCAAGTGTCATCCCGCGATCATGGCCAGCGCGTGACCTGCCGCGCCCACAGCGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000585400.1
CDS GCA 72 bp ACGCACGGCAGCTCCAAGCTCTGTCCTGCCCGCACGTaGCCCTCATCCAGGCCTGGCCACTCGATGACAGGG +
Preference number: 6 (lower is better)
Translates to: THGSSKLCPART*PSSRPGHSMTG
Trigger: CCCTGTCATCGAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACAGAGCTTGGAGCTGCCGTGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GAGAAGGTGCTCCCAGATTTCTCCACGCTGCCGAGATaGACGCGCCGCGACTCCTGCGGCAGCCGCGACTCG +
Preference number: 6 (lower is better)
Translates to: EKVLPDFSTLPR*TRRDSCGSRDS
Trigger: CGAGTCGCGGCTGCCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTGGGAGCACCTTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GCTCTCGGGAGAAGGTGCTCCCAGATTTCTCCACGCTaGCGAGATGCACGCGCCGCGACTCCTGCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: ALGRRCSQISPR*RDARAATPAAA
Trigger: GGCTGCCGCAGGAGTCGCGGCGCGTGCATCTCGGCAGCGTGGAGAAATCTGGGAGCACCTTCTCCCGAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GCTCTGTCCTGCCCGCACGTGCCCCTCATCCAGGCCTaGCCACTCGATGACAGGGGGTCCTGGAGGGAACAG +
Preference number: 6 (lower is better)
Translates to: ALSCPHVPLIQA*PLDDRGSWREQ
Trigger: CTGTTCCCTCCAGGACCCCCTGTCATCGAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGGCAGGACAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GGGCCACCGCCTGGGTGTGCTCTGTGCCCCACGCTGTaGACACCGGCTGGCCATTCTTCAGCCACTGCAGTG +
Preference number: 6 (lower is better)
Translates to: GPPPGCALCPTL*TPAGHSSATAV
Trigger: CACTGCAGTGGCTGAAGAATGGCCAGCCGGTGTCCACAGCGTGGGGCACAGAGCACACCCAGGCGGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp CCTGGCCACCCCCATAGCCCTGGCGTGGCACCAACCTaGTACCACATGAGGGAGGGCTCTGGGTTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: PGHPHSPGVAPT*YHMREGSGLPP
Trigger: CGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGTTGGTGCCACGCCAGGGCTATGGGGGTGGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592132.1
CDS CCA 72 bp GTGGGCCTCGCAGCTGAGCTGCGCTCCATGGTCTTCTaGCCTCACGGTCATCACCAGCACACTGCGGGCCAC +
Preference number: 6 (lower is better)
Translates to: VGLAAELRSMVF*PHGHHQHTAGH
Trigger: GTGGCCCGCAGTGTGCTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GGAGGGGTTCCGCAGTGGGCGTGGTTACACCGCGGCTaGGACTTCCAGAACGGGAGGGTTCCAGGATGGGTG +
Preference number: 6 (lower is better)
Translates to: GGVPQWAWLHRG*DFQNGRVPGWV
Trigger: CACCCATCCTGGAACCCTCCCGTTCTGGAAGTCCCAGCCGCGGTGTAACCACGCCCACTGCGGAACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CAA 90 bp GTCACGGTGCGCGAGTCCTTGTACCACATGAGGGAGGGCTCTGGGTaGCCCCCGATAGCCAAACACACCAGCCTCACCCGGGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: VTVRESLYHMREGSG*PPIAKHTSLTRVPA
Trigger: GGCTGGGACCCGGGTGAGGCTGGTGTGTTTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACTCGCGCACCGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp CCTGGCGTGGCACCAACCTTGTACCACATGAGGGAGGGCTCTGGGTaGCCCCCGATAGCCAAACACACCAGCCTCACCCGGGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: PGVAPTLYHMREGSG*PPIAKHTSLTRVPA
Trigger: GGCTGGGACCCGGGTGAGGCTGGTGTGTTTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGTTGGTGCCACGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592132.1
CDS TCA 72 bp CCCGCACGTGCCCCTCATCCAGGCCTGGCCACTCGATaGCAGGGGGTCCTGGAGGGAACAGAACATTCACGG +
Preference number: 6 (lower is better)
Translates to: PARAPHPGLATR*QGVLEGTEHSR
Trigger: CCGTGAATGTTCTGTTCCCTCCAGGACCCCCTGTCATCGAGTGGCCAGGCCTGGATGAGGGGCACGTGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GGTGACCTGCAGTGTGATGCCGTGCTCCTGGGTCCCTaGAGACACGCTGTTGTGGGCCTCGCAGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: GDLQCDAVLLGP*RHAVVGLAAEL
Trigger: CAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCACACTGCAGGTCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GACACGAGCTCGGGCCCCATCTCAGAGCGGCCGACCTaGCACTCATACTCCGCGTCATCGCTGAGGTCACAG +
Preference number: 6 (lower is better)
Translates to: DTSSGPISERPT*HSYSASSLRSQ
Trigger: CTGTGACCTCAGCGATGACGCGGAGTATGAGTGCCAGGTCGGCCGCTCTGAGATGGGGCCCGAGCTCGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp CCACAATGCACTGGTAAGCGCCAGCCTGGGCCAGTTTaGCATGGTGAATCCGCAGGCGCCCCGTTGGTCCCC +
Preference number: 6 (lower is better)
Translates to: PQCTGKRQPGPV*HGESAGAPLVP
Trigger: GGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCCCAGGCTGGCGCTTACCAGTGCATTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp TGGGTCTCTCTAGTGGGAGGGGTTCCGCAGTGGGCGTaGTTACACCGCGGCTGGGACTTCCAGAACGGGAGG +
Preference number: 6 (lower is better)
Translates to: WVSLVGGVPQWA*LHRGWDFQNGR
Trigger: CCTCCCGTTCTGGAAGTCCCAGCCGCGGTGTAACCACGCCCACTGCGGAACCCCTCCCACTAGAGAGACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CAA 72 bp GTGATGCCGTGCTCCTGGGTCCCTGCAGACACGCTGTaGTGGGCCTCGCAGCTGAGCTGCGCTCCATGGTCT +
Preference number: 6 (lower is better)
Translates to: VMPCSWVPADTL*WASQLSCAPWS
Trigger: AGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp GTGGACGCGCTGAGCTGTCCAGCCTTGCACGTGAACTaGGCCTGGTTGTCCGACGGCCCTGTGACCAGCACC +
Preference number: 6 (lower is better)
Translates to: VDALSCPALHVN*AWLSDGPVTST
Trigger: GGTGCTGGTCACAGGGCCGTCGGACAACCAGGCCAAGTTCACGTGCAAGGCTGGACAGCTCAGCGCGTCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp ACCTGCAGTGTGATGCCGTGCTCCTGGGTCCCTGCAGACACGCTGTaGTGGGCCTCGCAGCTGAGCTGCGCTCCATGGTCTTCTGGCCTC +
Preference number: 6 (lower is better)
Translates to: TCSVMPCSWVPADTL*WASQLSCAPWSSGL
Trigger: GAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCATCACACTGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp GATGGTGGGAGCATCTGGTGGAAGGCAGAGGCTTGGGGAAGACACTaGGGCCCAGACAGGTCTGGGTGTGAGAGGGCCCCAGGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: DGGSIWWKAEAWGRH*GPDRSGCERAPGGR
Trigger: CCTCCCACCTGGGGCCCTCTCACACCCAGACCTGTCTGGGCCCAAGTGTCTTCCCCAAGCCTCTGCCTTCCACCAGATGCTCCCACCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS GCA 72 bp GCCGTCGTGCTGGAGGCGCCACCCCATTGTCCACAATaGACTGGTAAGCGCCAGCCTGGGCCAGTTTGGCAT +
Preference number: 6 (lower is better)
Translates to: AVVLEAPPHCPQ*TGKRQPGPVWH
Trigger: ATGCCAAACTGGCCCAGGCTGGCGCTTACCAGTGCATTGTGGACAATGGGGTGGCGCCTCCAGCACGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp CCTGGGCGGCAGACACGTTGGCAATGGTCAGGAGGCTaGTGTGGACACCACCCTGGTGGTATGTGTGCTCCG +
Preference number: 6 (lower is better)
Translates to: PGRQTRWQWSGG*CGHHPGGMCAP
Trigger: CGGAGCACACATACCACCAGGGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCTGCCGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GCAGCTTGGGAGGAACCAGGATGGAGAGGATCACTCTaGGAGACACGAGCTCGGGCCCCATCTCAGAGCGGC +
Preference number: 6 (lower is better)
Translates to: AAWEEPGWRGSL*ETRARAPSQSG
Trigger: GCCGCTCTGAGATGGGGCCCGAGCTCGTGTCTCCCAGAGTGATCCTCTCCATCCTGGTTCCTCCCAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp TGGACACCGGCTGGCCATTCTTCAGCCACTGCAGTGTaGCTAAGGGATTACCCCCTCGGGCCACGCACGGCA +
Preference number: 6 (lower is better)
Translates to: WTPAGHSSATAV*LRDYPLGPRTA
Trigger: TGCCGTGCGTGGCCCGAGGGGGTAATCCCTTAGCCACACTGCAGTGGCTGAAGAATGGCCAGCCGGTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp ATGCCGTGCTCCTGGGTCCCTGCAGACACGCTGTTGTaGGCCTCGCAGCTGAGCTGCGCTCCATGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: MPCSWVPADTLL*ASQLSCAPWSS
Trigger: AGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGTGTCTGCAGGGACCCAGGAGCACGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GCGCTGAGCTGTCCAGCCTTGCACGTGAACTTGGCCTaGTTGTCCGACGGCCCTGTGACCAGCACCAGCTCT +
Preference number: 6 (lower is better)
Translates to: ALSCPALHVNLA*LSDGPVTSTSS
Trigger: AGAGCTGGTGCTGGTCACAGGGCCGTCGGACAACCAGGCCAAGTTCACGTGCAAGGCTGGACAGCTCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp CCAGAACGGGAGGGTTCCAGGATGGGTGGCTATCCCTaGGTGGGCGGAGCTCCCACAATGAGGAGACTCCAC +
Preference number: 6 (lower is better)
Translates to: PEREGSRMGGYP*VGGAPTMRRLH
Trigger: GTGGAGTCTCCTCATTGTGGGAGCTCCGCCCACCCAGGGATAGCCACCCATCCTGGAACCCTCCCGTTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp GCTGGGACTTCCAGAACGGGAGGGTTCCAGGATGGGTaGCTATCCCTGGGTGGGCGGAGCTCCCACAATGAG +
Preference number: 6 (lower is better)
Translates to: AGTSRTGGFQDG*LSLGGRSSHNE
Trigger: CTCATTGTGGGAGCTCCGCCCACCCAGGGATAGCCACCCATCCTGGAACCCTCCCGTTCTGGAAGTCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp CCACACTGGGTCTCTCTAGTGGGAGGGGTTCCGCAGTaGGCGTGGTTACACCGCGGCTGGGACTTCCAGAAC +
Preference number: 6 (lower is better)
Translates to: PHWVSLVGGVPQ*AWLHRGWDFQN
Trigger: GTTCTGGAAGTCCCAGCCGCGGTGTAACCACGCCCACTGCGGAACCCCTCCCACTAGAGAGACCCAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp CGTTCACCTCAGTGGGGTCCTGGAGGGCACGGATGGTaGGAGCATCTGGTGGAAGGCAGAGGCTTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RSPQWGPGGHGW*EHLVEGRGLGK
Trigger: CTTCCCCAAGCCTCTGCCTTCCACCAGATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp TCCACAGAACCCCCGACGTTCACCTCAGTGGGGTCCTaGAGGGCACGGATGGTGGGAGCATCTGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: STEPPTFTSVGS*RARMVGASGGR
Trigger: CCTTCCACCAGATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACGTCGGGGGTTCTGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CAA 72 bp CGCGAGTCCTTGTACCACATGAGGGAGGGCTCTGGGTaGCCCCCGATAGCCAAACACACCAGCCTCACCCGG +
Preference number: 6 (lower is better)
Translates to: RESLYHMREGSG*PPIAKHTSLTR
Trigger: CCGGGTGAGGCTGGTGTGTTTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACTCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp CGCCAGCCTGGGCCAGTTTGGCATGGTGAATCCGCAGGCGCCCCGTaGGTCCCCTGGATATCTTCTCCATGTCATCCAGGCTCTGGTCCT +
Preference number: 6 (lower is better)
Translates to: RQPGPVWHGESAGAP*VPWISSPCHPGSGP
Trigger: AGGACCAGAGCCTGGATGACATGGAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCCCAGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp ACGCTGTTGTGGGCCTCGCAGCTGAGCTGCGCTCCATaGTCTTCTGGCCTCACGGTCATCACCAGCACACTG +
Preference number: 6 (lower is better)
Translates to: TLLWASQLSCAP*SSGLTVITSTL
Trigger: CAGTGTGCTGGTGATGACCGTGAGGCCAGAAGACCATGGAGCGCAGCTCAGCTGCGAGGCCCACAACAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GGTGCGCGAGTCCTTGTACCACATGAGGGAGGGCTCTaGGTTGCCCCCGATAGCCAAACACACCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: GARVLVPHEGGL*VAPDSQTHQPH
Trigger: GTGAGGCTGGTGTGTTTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGACTCGCGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp AGAGGGCGTAATCCTGGGCGGCAGACACGTTGGCAATaGTCAGGAGGCTGCTGTGGACACCACCCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: RGRNPGRQTRWQ*SGGCCGHHPGG
Trigger: ACCACCAGGGTGGTGTCCACAGCAGCCTCCTGACCATTGCCAACGTGTCTGCCGCCCAGGATTACGCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp AGCCCCGAGGGTCCTGAAGGTGGCTCTGTGGGCAGCTaGTCTTCAGGTTCTCCAGAAGGCTGGTGGAGACCT +
Preference number: 6 (lower is better)
Translates to: SPEGPEGGSVGS*SSGSPEGWWRP
Trigger: AGGTCTCCACCAGCCTTCTGGAGAACCTGAAGACCAGCTGCCCACAGAGCCACCTTCAGGACCCTCGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS CAA 72 bp CACGGATGGTGGGAGCATCTGGTGGAAGGCAGAGGCTaGGGGAAGACACTTGGGCCCAGACAGGTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: HGWWEHLVEGRG*GKTLGPRQVWV
Trigger: CACCCAGACCTGTCTGGGCCCAAGTGTCTTCCCCAAGCCTCTGCCTTCCACCAGATGCTCCCACCATCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CAA 90 bp ACAGGGGGTCCTGGAGGGAACAGAACATTCACGGTGAATGAGGCCTaGATGGGGGCCTCCAGTGCTGGGCTAGACGCCTCACAGACCAGC +
Preference number: 6 (lower is better)
Translates to: TGGPGGNRTFTVNEA*MGASSAGLDASQTS
Trigger: GCTGGTCTGTGAGGCGTCTAGCCCAGCACTGGAGGCCCCCATCAAGGCCTCATTCACCGTGAATGTTCTGTTCCCTCCAGGACCCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp ACGCATGTCAAGTTTAAGGCGTCTCCCGGGCGCAGTGCGGATGCGTaGGCCAGGATCGTCACGTTAGTTGGGGGAAACTGCACCGCCAGC +
Preference number: 6 (lower is better)
Translates to: THVKFKASPGRSADA*ARIVTLVGGNCTAS
Trigger: GCTGGCGGTGCAGTTTCCCCCAACTAACGTGACGATCCTGGCCAACGCATCCGCACTGCGCCCGGGAGACGCCTTAAACTTGACATGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp GCGGCCACGCCCTCCAGCCTCTCCCCTTCCTTGTCCCAGGACAAGTaGACCGGCGGATTGCTGCTGACGCTGACGCATGTCAAGTTTAAG +
Preference number: 6 (lower is better)
Translates to: AATPSSLSPSLSQDK*TGGLLLTLTHVKFK
Trigger: CTTAAACTTGACATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAAGGAAGGGGAGAGGCTGGAGGGCGTGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp GAAGGCTGGTGGAGACCTGGGGTAGTGATGGGAAGCTGGGTCCCTTaGTCAGCCAGTCCACTGTCCCCCAAGGCATTACTGGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: EGWWRPGVVMGSWVP*SASPLSPKALLASS
Trigger: GCTGCTGGCCAGTAATGCCTTGGGGGACAGTGGACTGGCTGACAAAGGGACCCAGCTTCCCATCACTACCCCAGGTCTCCACCAGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp AGCGGCCGACCTGGCACTCATACTCCGCGTCATCGCTaGGGTCACAGGCCTCGATGTGCAGGTGGAATTCAC +
Preference number: 6 (lower is better)
Translates to: SGRPGTHTPRHR*GHRPRCAGGIH
Trigger: GTGAATTCCACCTGCACATCGAGGCCTGTGACCTCAGCGATGACGCGGAGTATGAGTGCCAGGTCGGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp AGCTCCGGGGTGTCACCCTGGCTGTGGCCTCCACAGTaGAGAGTTTCTGCTGGGAGCCCTCGTTCACGTTTG +
Preference number: 6 (lower is better)
Translates to: SSGVSPWLWPPQ*RVSAGSPRSRL
Trigger: CAAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCACTGTGGAGGCCACAGCCAGGGTGACACCCCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp TGGGTGGCTATCCCTGGGTGGGCGGAGCTCCCACAATaGGGAGACTCCACAATGGGCAAGGTTCCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: WVAIPGWAELPQ*GDSTMGKVPWV
Trigger: CACCCAAGGAACCTTGCCCATTGTGGAGTCTCCTCATTGTGGGAGCTCCGCCCACCCAGGGATAGCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS GCA 72 bp TTCGCGTCCCCAGACACACAGTTGACCACGTACTCCTaGCCAGCTACCCAGGTGACCATGGTGCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: FASPDTQLTTYS*PATQVTMVPAS
Trigger: AGAGGCAGGCACCATGGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGGACGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GGGGGCAAATCTGACAACAAGACGGAGCAGCCGTCGTaGTGGAGGCGCCACCCCATTGTCCACAATGCACTG +
Preference number: 6 (lower is better)
Translates to: GGKSDNKTEQPS*WRRHPIVHNAL
Trigger: CAGTGCATTGTGGACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGTCTTGTTGTCAGATTTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GGGGCTGAAGTCCCTCAGGGAGCGGTAATACGGCTCTaGCTCTGTTGTGCTGACCGTGGAGCTCTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: GAEVPQGAVIRL*LCCADRGALSV
Trigger: GACACTCAGAGCTCCACGGTCAGCACAACAGAGGCAGAGCCGTATTACCGCTCCCTGAGGGACTTCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GACCGTTGTCCTCCCGCCGCGCCAGGAATGTCAGGTTaGACATGGAGATGTGACCGCCATGCAGTCCATCCA +
Preference number: 6 (lower is better)
Translates to: DRCPPAAPGMSG*TWRCDRHAVHP
Trigger: TGGATGGACTGCATGGCGGTCACATCTCCATGTCCAACCTGACATTCCTGGCGCGGCGGGAGGACAACGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CCA 72 bp GAAGGCTGGTGGAGACCTGGGGTAGTGATGGGAAGCTaGGTCCCTTTGTCAGCCAGTCCACTGTCCCCCAAG +
Preference number: 6 (lower is better)
Translates to: EGWWRPGVVMGS*VPLSASPLSPK
Trigger: CTTGGGGGACAGTGGACTGGCTGACAAAGGGACCCAGCTTCCCATCACTACCCCAGGTCTCCACCAGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GAGACTCCACAATGGGCAAGGTTCCTTGGGTGGGTGTaGTTTCCATGGTGGGCGGGGCTCACAGTGCACGTC +
Preference number: 6 (lower is better)
Translates to: ETPQWARFLGWV*FPWWAGLTVHV
Trigger: GACGTGCACTGTGAGCCCCGCCCACCATGGAAACCACACCCACCCAAGGAACCTTGCCCATTGTGGAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp AGACTATGTCCACAGAACCCCCGACGTTCACCTCAGTaGGGTCCTGGAGGGCACGGATGGTGGGAGCATCTG +
Preference number: 6 (lower is better)
Translates to: RLCPQNPRRSPQ*GPGGHGWWEHL
Trigger: CAGATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACGTCGGGGGTTCTGTGGACATAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS CCA 72 bp CGTGGCACCAACCTTGTACCACATGAGGGAGGGCTCTaGGTTGCCCCCGATAGCCAAACACACCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: RGTNLVPHEGGL*VAPDSQTHQPH
Trigger: GTGAGGCTGGTGTGTTTGGCTATCGGGGGCAACCCAGAGCCCTCCCTCATGTGGTACAAGGTTGGTGCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592132.1
CDS CAA 72 bp ATGTCAGGTGCTGGCTTCGCGTCCCCAGACACACAGTaGACCACGTACTCCTGCCCAGCTACCCAGGTGACC +
Preference number: 6 (lower is better)
Translates to: MSGAGFASPDTQ*TTYSCPATQVT
Trigger: GGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGGACGCGAAGCCAGCACCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp GCTTCACTGAAGGCCTCACATGTGAGGGTCAGACCGTaGTCCTCCCGCCGCGCCAGGAATGTCAGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: ASLKASHVRVRP*SSRRARNVRLD
Trigger: GTCCAACCTGACATTCCTGGCGCGGCGGGAGGACAACGGTCTGACCCTCACATGTGAGGCCTTCAGTGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 72 bp GGGCCAGTTTGGCATGGTGAATCCGCAGGCGCCCCGTaGGTCCCCTGGATATCTTCTCCATGTCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: GPVWHGESAGAP*VPWISSPCHPG
Trigger: GCCTGGATGACATGGAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp CGCCAGCCCAGCCACCATCGTAGCAGAACCCGCGGGCGACTGGACTaGCTGACACAGGAGAGTGTCACGTTCTTGTTCTCAGTCTGGGAT +
Preference number: 6 (lower is better)
Translates to: RQPSHHRSRTRGRLD*LTQESVTFLFSVWD
Trigger: ATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCGGGTTCTGCTACGATGGTGGCTGGGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 90 bp TCCAGCCTCTCCCCTTCCTTGTCCCAGGACAAGTTGACCGGCGGATaGCTGCTGACGCTGACGCATGTCAAGTTTAAGGCGTCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: SSLSPSLSQDKLTGG*LLTLTHVKFKASPG
Trigger: CCCGGGAGACGCCTTAAACTTGACATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAAGGAAGGGGAGAGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp AGGGGGTCCTGGAGGGAACAGAACATTCACGGTGAATaGGGCCTTGATGGGGGCCTCCAGTGCTGGGCTAGA +
Preference number: 6 (lower is better)
Translates to: RGSWREQNIHGE*GLDGGLQCWAR
Trigger: TCTAGCCCAGCACTGGAGGCCCCCATCAAGGCCTCATTCACCGTGAATGTTCTGTTCCCTCCAGGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp CGCCGCGCCAGGAATGTCAGGTTGGACATGGAGATGTaGCCGCCATGCAGTCCATCCATGACTGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RRARNVRLDMEM*PPCSPSMTVSS
Trigger: GGAGGAGACAGTCATGGATGGACTGCATGGCGGTCACATCTCCATGTCCAACCTGACATTCCTGGCGCGGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS GCA 72 bp TACTCCGCGTCATCGCTGAGGTCACAGGCCTCGATGTaGAGGTGGAATTCACCTCTAGCAGGGTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: YSASSLRSQASM*RWNSPLAGSPS
Trigger: GGAAGGGGACCCTGCTAGAGGTGAATTCCACCTGCACATCGAGGCCTGTGACCTCAGCGATGACGCGGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp TCCAGTGCTGGGCTAGACGCCTCACAGACCAGCAACTaGCTATTATCTGAGCTCCGGGGTGTCACCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SSAGLDASQTSN*LLSELRGVTLA
Trigger: AGCCAGGGTGACACCCCGGAGCTCAGATAATAGGCAGTTGCTGGTCTGTGAGGCGTCTAGCCCAGCACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GCAAGCGTGGAGATCCAGACCCTAATCCTGAGGTGCTaGATCCACAGTGGGCATGGTGCTGGTGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: ASVEIQTLILRC*IHSGHGAGACL
Trigger: CAAGCAGGCACCAGCACCATGCCCACTGTGGATGCAGCACCTCAGGATTAGGGTCTGGATCTCCACGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS CCA 72 bp AGACTATGTCCACAGAACCCCCGACGTTCACCTCAGTaGGGTCCTGGAGGGCACGGATGGTGGGAGCATAGT +
Preference number: 6 (lower is better)
Translates to: RLCPQNPRRSPQ*GPGGHGWWEHS
Trigger: ACTATGCTCCCACCATCCGTGCCCTCCAGGACCCCACTGAGGTGAACGTCGGGGGTTCTGTGGACATAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GGCCAGTTTGGCATGGTGAATCCGCAGGCGCCCCGTTaGTCCCCTGGATATCTTCTCCATGTCATCCAGGCT +
Preference number: 6 (lower is better)
Translates to: GQFGMVNPQAPR*SPGYLLHVIQA
Trigger: AGCCTGGATGACATGGAGAAGATATCCAGGGGACCAACGGGGCGCCTGCGGATTCACCATGCCAAACTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GGCCTGGGGTGGTACGACATCCACATAGTGGAACCCTaGAGTCCCCAGGGCCTCATACCTGATGCAGAACCT +
Preference number: 6 (lower is better)
Translates to: GLGWYDIHIVEP*SPQGLIPDAEP
Trigger: AGGTTCTGCATCAGGTATGAGGCCCTGGGGACTCCAGGGTTCCACTATGTGGATGTCGTACCACCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp CCTGGAGGGAACAGAACATTCACGGTGAATGAGGCCTaGATGGGGGCCTCCAGTGCTGGGCTAGACGCCTCA +
Preference number: 6 (lower is better)
Translates to: PGGNRTFTVNEA*MGASSAGLDAS
Trigger: TGAGGCGTCTAGCCCAGCACTGGAGGCCCCCATCAAGGCCTCATTCACCGTGAATGTTCTGTTCCCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp AAGTTTAAGGCGTCTCCCGGGCGCAGTGCGGATGCGTaGGCCAGGATCGTCACGTTAGTTGGGGGAAACTGC +
Preference number: 6 (lower is better)
Translates to: KFKASPGRSADA*ARIVTLVGGNC
Trigger: GCAGTTTCCCCCAACTAACGTGACGATCCTGGCCAACGCATCCGCACTGCGCCCGGGAGACGCCTTAAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp AGAATGGTGATGTCAGGTGCTGGCTTCGCGTCCCCAGACACACAGTaGACCACGTACTCCTGCCCAGCTACCCAGGTGACCATGGTGCCT +
Preference number: 6 (lower is better)
Translates to: RMVMSGAGFASPDTQ*TTYSCPATQVTMVP
Trigger: AGGCACCATGGTCACCTGGGTAGCTGGGCAGGAGTACGTGGTCAACTGTGTGTCTGGGGACGCGAAGCCAGCACCTGACATCACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp TTGGTGAAGGCTTCACTGAAGGCCTCACATGTGAGGGTCAGACCGTaGTCCTCCCGCCGCGCCAGGAATGTCAGGTTGGACATGGAGATG +
Preference number: 6 (lower is better)
Translates to: LVKASLKASHVRVRP*SSRRARNVRLDMEM
Trigger: CATCTCCATGTCCAACCTGACATTCCTGGCGCGGCGGGAGGACAACGGTCTGACCCTCACATGTGAGGCCTTCAGTGAAGCCTTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS TCA 72 bp CCTGATGGAGGGTCAGGGCGGCTGATGCTGACAAGTTaGATGTTGGTTTGGTCCGAGCCAAGGGCGTTGGTG +
Preference number: 6 (lower is better)
Translates to: PDGGSGRLMLTS*MLVWSEPRALV
Trigger: CACCAACGCCCTTGGCTCGGACCAAACCAACATTCAACTTGTCAGCATCAGCCGCCCTGACCCTCCATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GGCAAATCTGACAACAAGACGGAGCAGCCGTCGTGCTaGAGGCGCCACCCCATTGTCCACAATGCACTGGTA +
Preference number: 6 (lower is better)
Translates to: GKSDNKTEQPSC*RRHPIVHNALV
Trigger: TACCAGTGCATTGTGGACAATGGGGTGGCGCCTCCAGCACGACGGCTGCTCCGTCTTGTTGTCAGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp TGGAGACCTGGGGTAGTGATGGGAAGCTGGGTCCCTTaGTCAGCCAGTCCACTGTCCCCCAAGGCATTACTG +
Preference number: 6 (lower is better)
Translates to: WRPGVVMGSWVP*SASPLSPKALL
Trigger: CAGTAATGCCTTGGGGGACAGTGGACTGGCTGACAAAGGGACCCAGCTTCCCATCACTACCCCAGGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp TCTTCTCCCAGTCTCTCCCAGTTGAACATGCCCGGGAGGATGGGATaGGCATCGACAGTGCAGACTATGTCCACAGAACCCCCGACGTTC +
Preference number: 6 (lower is better)
Translates to: SSPSLSQLNMPGRMG*ASTVQTMSTEPPTF
Trigger: GAACGTCGGGGGTTCTGTGGACATAGTCTGCACTGTCGATGCCAATCCCATCCTCCCGGGCATGTTCAACTGGGAGAGACTGGGAGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp GCTCTCCTGTCCACTGGCTCTCCTCATATTCGTTCCTaGCTCGGTCCTCTTCCGACCCTGCCTCTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: ALLSTGSPHIRS*LGPLPTLPLSS
Trigger: AGAAGACAGAGGCAGGGTCGGAAGAGGACCGAGTCAGGAACGAATATGAGGAGAGCCAGTGGACAGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS GCA 72 bp GTCACCCTGGCTGTGGCCTCCACAGTGAAGAGTTTCTaGTGGGAGCCCTCGTTCACGTTTGCAGAGATGTCA +
Preference number: 6 (lower is better)
Translates to: VTLAVASTVKSF*WEPSFTFAEMS
Trigger: TGACATCTCTGCAAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCACTGTGGAGGCCACAGCCAGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp TTCTCTGAGATGCCTGAAGGTGGCTCTGTGGGCAGCTaGTCTTCAGGTTCTCCAGAAGGCTGGTGGAGACCT +
Preference number: 6 (lower is better)
Translates to: FSEMPEGGSVGS*SSGSPEGWWRP
Trigger: AGGTCTCCACCAGCCTTCTGGAGAACCTGAAGACCAGCTGCCCACAGAGCCACCTTCAGGCATCTCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353632.6
CDS CAA 72 bp AGCCACCATCGTAGCAGAACCCGCGGGCGACTGGACTaGCTGACACAGGAGAGTGTCACGTTCTTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: SHHRSRTRGRLD*LTQESVTFLFS
Trigger: TGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCGGGTTCTGCTACGATGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 72 bp TCCCCTTCCTTGTCCCAGGACAAGTTGACCGGCGGATaGCTGCTGACGCTGACGCATGTCAAGTTTAAGGCG +
Preference number: 6 (lower is better)
Translates to: SPSLSQDKLTGG*LLTLTHVKFKA
Trigger: CGCCTTAAACTTGACATGCGTCAGCGTCAGCAGCAATCCGCCGGTCAACTTGTCCTGGGACAAGGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp GTTCCAGAGTGTCCAAGTCTCCGGCCACCTGGTCATAGATTCCTCTaGGATCCTGATATGTGTCTTCAGGCCAGTGGAGGTCCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: VPECPSLRPPGHRFL*DPDMCLQASGGPRV
Trigger: GACCCTGGGACCTCCACTGGCCTGAAGACACATATCAGGATCCAAGAGGAATCTATGACCAGGTGGCCGGAGACTTGGACACTCTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp AGAGACCAGTGGAGTGTAAATTCCTGCAGGTGCAGGACAATGGGGTaGAGAGGGCTCTTACACCAGATGTCCCCTCAGCTCGAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: RDQWSVNSCRCRTMG*RGLLHQMSPQLEGQ
Trigger: CTGCCCTTCGAGCTGAGGGGACATCTGGTGTAAGAGCCCTCTCAACCCCATTGTCCTGCACCTGCAGGAATTTACACTCCACTGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp ACCATCGTAGCAGAACCCGCGGGCGACTGGACTTGCTaGCACAGGAGAGTGTCACGTTCTTGTTCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: TIVAEPAGDWTC*HRRVSRSCSQS
Trigger: AGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCGGGTTCTGCTACGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CCA 72 bp TGTCTGTCCACTCAGGAGAATGGTGATGTCAGGTGCTaGCTTCGCGTCCCCAGACACACAGTTGACCACGTA +
Preference number: 6 (lower is better)
Translates to: CLSTQENGDVRC*LRVPRHTVDHV
Trigger: TACGTGGTCAACTGTGTGTCTGGGGACGCGAAGCCAGCACCTGACATCACCATTCTCCTGAGTGGACAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp AGTCTCTCCCAGTTGAACATGCCCGGGAGGATGGGATaGGCATCGACAGTGCAGACTATGTCCACAGAACCC +
Preference number: 6 (lower is better)
Translates to: SLSQLNMPGRMG*ASTVQTMSTEP
Trigger: GGGTTCTGTGGACATAGTCTGCACTGTCGATGCCAATCCCATCCTCCCGGGCATGTTCAACTGGGAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp GTCAGGGCGGCTGATGCTGACAAGTTGAATGTTGGTTaGGTCCGAGCCAAGGGCGTTGGTGGCTGTACATGT +
Preference number: 6 (lower is better)
Translates to: VRAADADKLNVG*VRAKGVGGCTC
Trigger: ACATGTACAGCCACCAACGCCCTTGGCTCGGACCAAACCAACATTCAACTTGTCAGCATCAGCCGCCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp CATCCACAGTGGGCATGGTGCTGGTGCCTGCTTGGATaGTCCTTAAAGAAAGGTCCTGGGGGCTTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: HPQWAWCWCLLG*SLKKGPGGFGS
Trigger: TGAACCAAAGCCCCCAGGACCTTTCTTTAAGGATCATCCAAGCAGGCACCAGCACCATGCCCACTGTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS GCA 72 bp TATTGTCTGTCCACTCAGGAGAATGGTGATGTCAGGTaGTGGCTTCGCGTCCCCAGACACACAGTTGACCAC +
Preference number: 6 (lower is better)
Translates to: YCLSTQENGDVR*WLRVPRHTVDH
Trigger: GTGGTCAACTGTGTGTCTGGGGACGCGAAGCCAGCACCTGACATCACCATTCTCCTGAGTGGACAGACAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CCA 72 bp GTCCAAGTCTCCGGCCACCTGGTCATAGATTCCTCTTaGATCCTGATATGTGTCTTCAGGCCAGTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: VQVSGHLVIDSS*ILICVFRPVEV
Trigger: GACCTCCACTGGCCTGAAGACACATATCAGGATCCAAGAGGAATCTATGACCAGGTGGCCGGAGACTTGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS TCA 72 bp AGATGTCAGATATTGTCTGTCCACTCAGGAGAATGGTaGTGTCAGGTGCTGGCTTCGCGTCCCCAGACACAC +
Preference number: 6 (lower is better)
Translates to: RCQILSVHSGEW*CQVLASRPQTH
Trigger: GTGTGTCTGGGGACGCGAAGCCAGCACCTGACATCACCATTCTCCTGAGTGGACAGACAATATCTGACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 90 bp ACCCGCGGGCGACTGGACTTGCTGACACAGGAGAGTGTCACGTTCTaGTTCTCAGTCTGGGATGCAGATCCCAAGATAATAATGGCACTA +
Preference number: 6 (lower is better)
Translates to: TRGRLDLLTQESVTF*FSVWDADPKIIMAL
Trigger: TAGTGCCATTATTATCTTGGGATCTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCGCCCGCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 90 bp GCGGGATATTTTACGTTCAGGATGAGCGACTTCTTGAAGGTCTCCTaGGTGAAGGCTTCACTGAAGGCCTCACATGTGAGGGTCAGACCG +
Preference number: 6 (lower is better)
Translates to: AGYFTFRMSDFLKVS*VKASLKASHVRVRP
Trigger: CGGTCTGACCCTCACATGTGAGGCCTTCAGTGAAGCCTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCTGAACGTAAAATATCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 90 bp TCTGGATCAAGCAGCGAGGCATTTAGATCCAATAATCCAGACCCCTaGTATTCTCTGGACCCATATGGAGGCCCTTGCAGCCTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: SGSSSEAFRSNNPDP*YSLDPYGGPCSLPG
Trigger: TCCTGGGAGGCTGCAAGGGCCTCCATATGGGTCCAGAGAATACAAGGGGTCTGGATTATTGGATCTAAATGCCTCGCTGCTTGATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS CAA 72 bp TGGGCGGGATATTTTACGTTCAGGATGAGCGACTTCTaGAAGGTCTCCTTGGTGAAGGCTTCACTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: WAGYFTFRMSDF*KVSLVKASLKA
Trigger: GGCCTTCAGTGAAGCCTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCTGAACGTAAAATATCCCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 72 bp AGCAGCGAGGCATTTAGATCCAATAATCCAGACCCCTaGTATTCTCTGGACCCATATGGAGGCCCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: SSEAFRSNNPDP*YSLDPYGGPCS
Trigger: GCTGCAAGGGCCTCCATATGGGTCCAGAGAATACAAGGGGTCTGGATTATTGGATCTAAATGCCTCGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS CAA 90 bp CACAGTTTCTGGGCGGGATATTTTACGTTCAGGATGAGCGACTTCTaGAAGGTCTCCTTGGTGAAGGCTTCACTGAAGGCCTCACATGTG +
Preference number: 6 (lower is better)
Translates to: HSFWAGYFTFRMSDF*KVSLVKASLKASHV
Trigger: CACATGTGAGGCCTTCAGTGAAGCCTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCTGAACGTAAAATATCCCGCCCAGAAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS TCA 72 bp AATACCAAAGGGTTGGAGGAGAGTTCTCAAGGTTGGTaGGGTTGTCTCCACCCTCCACTATGCCTCTGTGAT +
Preference number: 6 (lower is better)
Translates to: NTKGLEESSQGW*GCLHPPLCLCD
Trigger: ATCACAGAGGCATAGTGGAGGGTGGAGACAACCTCACCAACCTTGAGAACTCTCCTCCAACCCTTTGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585400.1
CDS GCA 72 bp AGTGAAGAGTTTCTGCTGGGAGCCCTCGTTCACGTTTaGAGAGATGTCAGATATTGTCTGTCCACTCAGGAG +
Preference number: 6 (lower is better)
Translates to: SEEFLLGALVHV*RDVRYCLSTQE
Trigger: CTCCTGAGTGGACAGACAATATCTGACATCTCTGCAAACGTGAACGAGGGCTCCCAGCAGAAACTCTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353632.6
ENST00000378910.10
CDS CAA 72 bp TTTACGTTCAGGATGAGCGACTTCTTGAAGGTCTCCTaGGTGAAGGCTTCACTGAAGGCCTCACATGTGAGG +
Preference number: 6 (lower is better)
Translates to: FTFRMSDFLKVS*VKASLKASHVR
Trigger: CCTCACATGTGAGGCCTTCAGTGAAGCCTTCACCAAGGAGACCTTCAAGAAGTCGCTCATCCTGAACGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CAA 90 bp GTGAGCCACTGCGCCCAGTCTCTTTATCTTTCCATCTTTCTCTCCTaGTCTAAGCCGTTCTCTCTCCTTTTGTCTCTGTCTCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: VSHCAQSLYLSIFLS*SKPFSLLLSLSLPL
Trigger: GAGAGGAAGAGACAGAGACAAAAGGAGAGAGAACGGCTTAGACAAGGAGAGAAAGATGGAAAGATAAAGAGACTGGGCGCAGTGGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378910.10
CDS TCA 72 bp GATCTCCAACTTGCCATAATGGATTGTTCTGATTTCTaGGGAGCCAGGACAAGTTGGCGACCTTACTCCTCC +
Preference number: 6 (lower is better)
Translates to: DLQLAIMDCSDF*GARTSWRPYSS
Trigger: GGAGGAGTAAGGTCGCCAACTTGTCCTGGCTCCTCAGAAATCAGAACAATCCATTATGGCAAGTTGGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS CCA 72 bp CTGACACAGGAGAGTGTCACGTTCTTGTTCTCAGTCTaGGATGCAGATCCCAAGATAATAATGGCACTAGGG +
Preference number: 6 (lower is better)
Translates to: LTQESVTFLFSV*DADPKIIMALG
Trigger: CCCTAGTGCCATTATTATCTTGGGATCTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS CCA 72 bp CGCCAGGCGTGTGACATCTTTCCAATGGAAGAGTCCTaGGATCTCCAACTTGCCATAATGGATTGTTCTGAT +
Preference number: 6 (lower is better)
Translates to: RQACDIFPMEES*DLQLAIMDCSD
Trigger: ATCAGAACAATCCATTATGGCAAGTTGGAGATCCCAGGACTCTTCCATTGGAAAGATGTCACACGCCTGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591817.1
CDS CAA 72 bp CGACTGGACTTGCTGACACAGGAGAGTGTCACGTTCTaGTTCTCAGTCTGGGATGCAGATCCCAAGATAATA +
Preference number: 6 (lower is better)
Translates to: RLDLLTQESVTF*FSVWDADPKII
Trigger: TATTATCTTGGGATCTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGTGTCAGCAAGTCCAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1
CDS GCA 72 bp ACAGGAGAGTGTCACGTTCTTGTTCTCAGTCTGGGATaGAGATCCCAAGATAATAATGGCACTAGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: TGECHVLVLSLG*RSQDNNGTRGK
Trigger: TTTCCCCCTAGTGCCATTATTATCTTGGGATCTGCATCCCAGACTGAGAACAAGAACGTGACACTCTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353632.6
ENST00000378910.10
ENST00000592132.1