RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPHP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000131697

Ensembl transcript IDs: ENST00000378156.9, ENST00000378161.5, ENST00000378169.7, ENST00000460696.1, ENST00000466897.1, ENST00000468253.1, ENST00000470763.1, ENST00000478423.6, ENST00000489180.6, ENST00000506941.1, ENST00000622020.4

Found 1316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCTGCGGGTG +
Preference number: 1 (lower is better)
Translates to: ANTLVPRRPKSPPAS*RRTDLIRSSLRLRV
Trigger: CACCCGCAGGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp TACAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCTGCGGGTG +
Preference number: 1 (lower is better)
Translates to: YNTLVPRRPKSPPAS*RRTDLIRSSLRLRV
Trigger: CACCCGCAGGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CCA 90 bp TCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGCATaGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGC +
Preference number: 1 (lower is better)
Translates to: SDSRLTSWGPLPCRA*VSSMAASSLSTSAS
Trigger: GCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp TCCAGCTTACGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTaGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCC +
Preference number: 1 (lower is better)
Translates to: SSLRLRVASDSRLTS*GPLPCRAWVSSMAA
Trigger: GGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCGTAAGCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR TCA 90 bp AGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGCTGGCGATGCTCTCGGCCTTCGTGC +
Preference number: 1 (lower is better)
Translates to: RTRRPPAWRGACAPW*WPGSAGWRCSRPSC
Trigger: GCACGAAGGCCGAGAGCATCGCCAGCCTGCTGAGCCTGGCCATCACCACGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp CATCTCTGCTCACAGGCACGAGGATGTGGGTCAGGGCGCCAGAGCTaGGCTGGCCGGCCTCATCCAGCTGGACCAGCTGCAGTCGTGGCG +
Preference number: 1 (lower is better)
Translates to: HLCSQARGCGSGRQS*AGRPHPAGPAAVVA
Trigger: CGCCACGACTGCAGCTGGTCCAGCTGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCTGACCCACATCCTCGTGCCTGTGAGCAGAGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp CTCACTGTCTGTGTCCCCCGAAGGACAAGGGACAGGCGGGTCAGCTaGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGG +
Preference number: 1 (lower is better)
Translates to: LTVCVPRRTRDRRVS*PATQETSTRCREWR
Trigger: CCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCTGTCCCTTGTCCTTCGGGGGACACAGACAGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp CCCACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCA +
Preference number: 1 (lower is better)
Translates to: PTLAKVRCSRPFTTE*TPMGLTRPNPSMSP
Trigger: TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR CCA 90 bp CCCATCAGCAGCCCCTATCCCAGCATAGGCCTCAGTCGAAGCCCCTaGAACGTCCCAGGTGGGACCCTCCTGAGCCACCCAACCCACCTG +
Preference number: 1 (lower is better)
Translates to: PISSPYPSIGLSRSP*NVPGGTLLSHPTHL
Trigger: CAGGTGGGTTGGGTGGCTCAGGAGGGTCCCACCTGGGACGTTCCAGGGGCTTCGACTGAGGCCTATGCTGGGATAGGGGCTGCTGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR TCA 90 bp ACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCCACTaGCAGGCTCCGTGGGTGCATCCAGGTGTTCTTCTGAGCCCAGCG +
Preference number: 1 (lower is better)
Translates to: TWVVSWKAAAPLWGH*QAPWVHPGVLLSPA
Trigger: CGCTGGGCTCAGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 90 bp GAGCTTGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTCTGCCCTaGGGTGCGCACAGGCAGGCACCCAGCCTTGTGTCCCTTGACACC +
Preference number: 1 (lower is better)
Translates to: ELVTGPTGSHVGPLP*GAHRQAPSLVSLDT
Trigger: GGTGTCAAGGGACACAAGGCTGGGTGCCTGCCTGTGCGCACCTCAGGGCAGAGGACCGACATGGGACCCTGTAGGGCCAGTGACAAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR GCA 90 bp ACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGTaGTCCGTGGTGATGGCCAGGCTCAGCAGGCTGGCGATGCTCTCG +
Preference number: 1 (lower is better)
Translates to: TNSKNSATPSVAWSV*SVVMARLSRLAMLS
Trigger: CGAGAGCATCGCCAGCCTGCTGAGCCTGGCCATCACCACGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp CAGGAGGCCACCAGCTGGTGGCAATCCACGTCCACCAGGTTGAGATaGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACGCCAACATGC +
Preference number: 1 (lower is better)
Translates to: QEATSWWQSTSTRLR*TKRLPALRGLTPTC
Trigger: GCATGTTGGCGTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCAGCTGGTGGCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR TCA 90 bp TCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGGGCTTaGCGCGGCCAAACCCCAGCATGTCTCCACTCACCACCATGTTGT +
Preference number: 1 (lower is better)
Translates to: SGAAGPSPPSGRRWA*RGQTPACLHSPPCC
Trigger: ACAACATGGTGGTGAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR TCA 90 bp TCTGCCCTGAGGTGCGCACAGGCAGGCACCCAGCCTTGTGTCCCTTaGCACCCCATCAGCAGCCCCTATCCCAGCATAGGCCTCAGTCGA +
Preference number: 1 (lower is better)
Translates to: SALRCAQAGTQPCVP*HPISSPYPSIGLSR
Trigger: TCGACTGAGGCCTATGCTGGGATAGGGGCTGCTGATGGGGTGTCAAGGGACACAAGGCTGGGTGCCTGCCTGTGCGCACCTCAGGGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR GCA 90 bp TCAGTGAGCTTGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTCTaGCCTGAGGTGCGCACAGGCAGGCACCCAGCCTTGTGTCCCTTG +
Preference number: 1 (lower is better)
Translates to: SVSLSLALQGPMSVL*PEVRTGRHPALCPL
Trigger: CAAGGGACACAAGGCTGGGTGCCTGCCTGTGCGCACCTCAGGGCAGAGGACCGACATGGGACCCTGTAGGGCCAGTGACAAGCTCACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR GCA 90 bp CAGCATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCC +
Preference number: 1 (lower is better)
Translates to: QHVSTHHHVVLLVFS*HDLKLVGGLHSRPA
Trigger: GGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR CCA 90 bp CTCCAGCTGGAAGATGACCGCAAATGCAGGGTGGCCGACCATCTCTaGGAGGCGGAGGCGGCTTCTCAAAACCAGAGCTTGGCTCCCGGA +
Preference number: 1 (lower is better)
Translates to: LQLEDDRKCRVADHL*EAEAASQNQSLAPG
Trigger: TCCGGGAGCCAAGCTCTGGTTTTGAGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp AGAGCTGGGCTGGCCGGCCTCATCCAGCTGGACCAGCTGCAGTCGTaGCGTCGTTGCGGGTGGGAAGCGGTAGAACTGGAAGGTGAAATA +
Preference number: 1 (lower is better)
Translates to: RAGLAGLIQLDQLQS*RRCGWEAVELEGEI
Trigger: TATTTCACCTTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGATGAGGCCGGCCAGCCCAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp ACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTaGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTTC +
Preference number: 1 (lower is better)
Translates to: TMLSCSYSVATTSSS*EACTAGRPWRRRCF
Trigger: GAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 90 bp TTTGGGGCCACTGACAGGCTCCGTGGGTGCATCCAGGTGTTCTTCTaGGCCCAGCGAGAACTGGAACCGGAGTGTACCCGACTCCACCTG +
Preference number: 1 (lower is better)
Translates to: FGATDRLRGCIQVFF*AQRELEPECTRLHL
Trigger: CAGGTGGAGTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 90 bp GGCCTTGGCGGAGGAGATGCTTCATCTGGACGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCT +
Preference number: 1 (lower is better)
Translates to: GLGGGDASSGRQQIR*AAGSLRPRRQSAGS
Trigger: AGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp TGCAGGGCTGCTGAACACGTACTCCAGCTGGAAGATGACCGCAAATaGAGGGTGGCCGACCATCTCTGGGAGGCGGAGGCGGCTTCTCAA +
Preference number: 1 (lower is better)
Translates to: CRAAEHVLQLEDDRK*RVADHLWEAEAASQ
Trigger: TTGAGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTTCAGCAGCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp GCTGGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCCGGAGGACTaGAGGAGCACCATGGAGGCTCTCGAGGGCTGCCCTGCAGAGCTC +
Preference number: 1 (lower is better)
Translates to: AGCLLASRISGKPED*RSTMEALEGCPAEL
Trigger: GAGCTCTGCAGGGCAGCCCTCGAGAGCCTCCATGGTGCTCCTGCAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp GCATTGCCGTCCACTCCTGCAGGGCTGCTGAACACGTACTCCAGCTaGAAGATGACCGCAAATGCAGGGTGGCCGACCATCTCTGGGAGG +
Preference number: 1 (lower is better)
Translates to: ALPSTPAGLLNTYSS*KMTANAGWPTISGR
Trigger: CCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAGTGGACGGCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp GACCCTTCCCTTGTGGGTCTGGGGGCTTCCGGTCGCCGCAGACCCTaGTCGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCAT +
Preference number: 1 (lower is better)
Translates to: DPSLVGLGASGRRRP*SLCHTRLHCIRSLH
Trigger: ATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACCGGAAGCCCCCAGACCCACAAGGGAAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR TCA 90 bp CAAGACCTTGGCGTGTTTAGTGGGCACTGCGCTGGACTTCCAAGGTaGCACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGGAGAGGC +
Preference number: 1 (lower is better)
Translates to: QDLGVFSGHCAGLPR*HGVHALLVAQPRRG
Trigger: GCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCGCAGTGCCCACTAAACACGCCAAGGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR TCA 90 bp TGTGCCCGTGTCTTCTCACCATGCCTCTTCCTCGCCCCATCAGACTaGACTGAGCCTAGGGAGGGACCGAGGCGTCTGCATCCACCTTTG +
Preference number: 1 (lower is better)
Translates to: CARVFSPCLFLAPSD*TEPREGPRRLHPPL
Trigger: CAAAGGTGGATGCAGACGCCTCGGTCCCTCCCTAGGCTCAGTTCAGTCTGATGGGGCGAGGAAGAGGCATGGTGAGAAGACACGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR GCA 90 bp CTGGCCGGCCTCATCCAGCTGGACCAGCTGCAGTCGTGGCGTCGTTaGGGGTGGGAAGCGGTAGAACTGGAAGGTGAAATACACAGTCTT +
Preference number: 1 (lower is better)
Translates to: LAGLIQLDQLQSWRR*GWEAVELEGEIHSL
Trigger: AAGACTGTGTATTTCACCTTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGATGAGGCCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp ACGCGGCCAAACCCCAGCATGTCTCCACTCACCACCATGTTGTCCTaGTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: TRPNPSMSPLTTMLS*SYSVATTSSSWEAC
Trigger: GCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATGCTGGGGTTTGGCCGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR GCA 90 bp AGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTaGTGGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAA +
Preference number: 1 (lower is better)
Translates to: SQTHHHGVRAHGTQA*WVSAAAKLDAGTTK
Trigger: TTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR CCA 90 bp GGCTCCGTGGGTGCATCCAGGTGTTCTTCTGAGCCCAGCGAGAACTaGAACCGGAGTGTACCCGACTCCACCTGCTTCACCTCTTCAGAG +
Preference number: 1 (lower is better)
Translates to: GSVGASRCSSEPSEN*NRSVPDSTCFTSSE
Trigger: CTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGATGCACCCACGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp TCCTGTAACTGTTCGGCAATGGATGTTTCCAGGACCAGGGAGGTCTaGCTCAGGTCGGCTTCCAGGTGGGAGATACCGGCCTCCAACGGG +
Preference number: 1 (lower is better)
Translates to: SCNCSAMDVSRTREV*LRSASRWEIPASNG
Trigger: CCCGTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCTGGAAACATCCATTGCCGAACAGTTACAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 90 bp CTGGGTCTCACAGATGACGTTCGGGTCGCTGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCATTCCCACCGGAGCACCTGGAAATGT +
Preference number: 1 (lower is better)
Translates to: LGLTDDVRVAAANMD*GVLTKHSHRSTWKC
Trigger: ACATTTCCAGGTGCTCCGGTGGGAATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGCAGCGACCCGAACGTCATCTGTGAGACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp GCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTAAGCTaGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: ALTEPRPAGCQQQLS*MQVLQNDQRSVSAS
Trigger: GGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR GCA 90 bp CTTGTGGGTCTGGGGGCTTCCGGTCGCCGCAGACCCTGGTCGCTTTaGCACACTCGTCTACACTGCATACGATCACTGCATAGACATCGA +
Preference number: 1 (lower is better)
Translates to: LVGLGASGRRRPWSL*HTRLHCIRSLHRHR
Trigger: TCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACCGGAAGCCCCCAGACCCACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 90 bp CTGCTGAACACGTACTCCAGCTGGAAGATGACCGCAAATGCAGGGTaGCCGACCATCTCTGGGAGGCGGAGGCGGCTTCTCAAAACCAGA +
Preference number: 1 (lower is better)
Translates to: LLNTYSSWKMTANAG*PTISGRRRRLLKTR
Trigger: TCTGGTTTTGAGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTTCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 90 bp AGTCGTGAGGAGGCTGCCTCCAGAGAAGCGGCTGGCTCCATCGTTTaGGATGACCCGAGATCTGGACGGTGGCAATGTGCTACAACCTCT +
Preference number: 1 (lower is better)
Translates to: SREEAASREAAGSIV*DDPRSGRWQCATTS
Trigger: AGAGGTTGTAGCACATTGCCACCGTCCAGATCTCGGGTCATCTCAAACGATGGAGCCAGCCGCTTCTCTGGAGGCAGCCTCCTCACGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp ACGCTCTGCTGCGCTTTCCAACATCCAAGGCTCTGGCTGTTCCTTTaGAGGGGGATTGGAGCTGGCCTTTCACACTTGGGGCCTCCATCA +
Preference number: 1 (lower is better)
Translates to: TLCCAFQHPRLWLFL*RGIGAGLSHLGPPS
Trigger: TGATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTGGAAAGCGCAGCAGAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR GCA 90 bp GAATCAGCTTCCAGCAAGGGGTTCCAAACAGCCCAGCGGACCATGTaGATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCATTG +
Preference number: 1 (lower is better)
Translates to: ESASSKGFQTAQRTM*MHARLDREVTEAAL
Trigger: CAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTTGCTGGAAGCTGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp TGCCCTGCAGAGCTCCTGGTCTGGGTTCCCACAACAATAGGGGCATaGAAAGGCGTGAACGGCAGCTCCTGTAACTGTTCGGCAATGGAT +
Preference number: 1 (lower is better)
Translates to: CPAELLVWVPTTIGA*KGVNGSSCNCSAMD
Trigger: ATCCATTGCCGAACAGTTACAGGAGCTGCCGTTCACGCCTTTGCATGCCCCTATTGTTGTGGGAACCCAGACCAGGAGCTCTGCAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp GGGGCACCATTTTCTACAAAGTCATGGTGCTGGGCCGAGAAGAAATaGGCCTCTTCACTCTCCTCCTCCCGGGCTGCAGGGAAGTTAGGA +
Preference number: 1 (lower is better)
Translates to: GAPFSTKSWCWAEKK*ASSLSSSRAAGKLG
Trigger: TCCTAACTTCCCTGCAGCCCGGGAGGAGGAGAGTGAAGAGGCGCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAATGGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR GCA 90 bp CCTCTAACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCATGGTaGTGGGCCGAGAAGAAATGCGCCTCTTCACTCTCCTCCTCCCGG +
Preference number: 1 (lower is better)
Translates to: PLTSNPGAPFSTKSW*WAEKKCASSLSSSR
Trigger: CCGGGAGGAGGAGAGTGAAGAGGCGCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 90 bp GGCCCTCTAACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCATaGTGCTGGGCCGAGAAGAAATGCGCCTCTTCACTCTCCTCCTCC +
Preference number: 1 (lower is better)
Translates to: GPLTSNPGAPFSTKS*CWAEKKCASSLSSS
Trigger: GGAGGAGGAGAGTGAAGAGGCGCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 90 bp CTGAGGGTTAAACGTCACAGGTTCTGTAGCGCTGACAGCCTCGGCTaGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCCGGAGGACTG +
Preference number: 1 (lower is better)
Translates to: LRVKRHRFCSADSLG*LFIGIQNLGKAGGL
Trigger: CAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGCGCTACAGAACCTGTGACGTTTAACCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp ACGATGACGCTGAGCTCGGGGTTGTCGATCTCCACAGTCACCGTGTaGTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCG +
Preference number: 1 (lower is better)
Translates to: TMTLSSGLSISTVTV*CVLWGFLSTNSKNS
Trigger: CGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACGGTGACTGTGGAGATCGACAACCCCGAGCTCAGCGTCATCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp GCGATCCGAGTAAATGATGACAAAGAAGTCTTTGATCTCCGGGCTTaGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGG +
Preference number: 1 (lower is better)
Translates to: AIRVNDDKEVFDLRA*TTGHLQKYVPWFPG
Trigger: CCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTCATCATTTACTCGGATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 90 bp TCTGGCTGTTCCTTTGCAGGGGGATTGGAGCTGGCCTTTCACACTTaGGGCCTCCATCAGAATTTCATCCTCAGAGCTTTTCAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: SGCSFAGGLELAFHT*GLHQNFILRAFQEW
Trigger: CCACTCCTGAAAAGCTCTGAGGATGAAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR GCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATaGGTAGATGGCAGCACCAGAGCCAGACCCACCACCACGGAGTTC +
Preference number: 1 (lower is better)
Translates to: FIKYILSNSDNEGPT*VDGSTRARPTTTEF
Trigger: GAACTCCGTGGTGGTGGGTCTGGCTCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR TCA 90 bp TGTAGCACCATCTCGTTGCTTTGTAGACAATCTGATTCTTCCTTCTaGGGGTTAAACGTCACAGGTTCTGTAGCGCTGACAGCCTCGGCT +
Preference number: 1 (lower is better)
Translates to: CSTISLLCRQSDSSF*GLNVTGSVALTASA
Trigger: AGCCGAGGCTGTCAGCGCTACAGAACCTGTGACGTTTAACCCTCAGAAGGAAGAATCAGATTGTCTACAAAGCAACGAGATGGTGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 90 bp GACGTCACCCTCAAGCCCTCACTGGTAGATGACCTTCACGCAAAATaGCTCTTCGTTTTTGTCCTCATGGTCATTGATGTAGATCAGGAT +
Preference number: 1 (lower is better)
Translates to: DVTLKPSLVDDLHAK*LFVFVLMVIDVDQD
Trigger: ATCCTGATCTACATCAATGACCATGAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGCTTGAGGGTGACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 90 bp CGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTaGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: RLRVASDSRLTSWGP*PCRAWVSSMAASSL
Trigger: CAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR GCA 90 bp TGTGCGGACGCTCTGCTGCGCCAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCGAGGCTCTCGAGGGCTaGCCTGCAGAGCTCCTGGTC +
Preference number: 2 (lower is better)
Translates to: CADALLRQHARPAPAQVSEALEG*PAELLV
Trigger: GACCAGGAGCTCTGCAGGGCAGCCCTCGAGAGCCTC...GGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGGCGCAGCAGAGCGTCCGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCAGGCCCCAGCTGGGTaGCGCAGGAAGGACGTCACC +
Preference number: 2 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSQAPAG*RRKDVT
Trigger: GGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTG...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR CCA 90 bp TGTGCGGACGCTCTGCTGCGCCAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCGACAGTGCGAGGGGTTaGGCTGGATCCCACCCTGCA +
Preference number: 2 (lower is better)
Translates to: CADALLRQHARPAPAQVSDSARG*AGSHPA
Trigger: TGCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTC...GGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGGCGCAGCAGAGCGTCCGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp ACAGACAGGCCCCAGCTGGGTGCCGCAGGAAGGACGTCACCCTCAAGCCCTCACCAGGCCCCAGCTGGGTaGCGCAGGAAGGACGTCACC +
Preference number: 2 (lower is better)
Translates to: TDRPQLGAAGRTSPSSPHQAPAG*RRKDVT
Trigger: GGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTG...GTGAGGGCTTGAGGGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAACCCCCAGCGTGGCGTaGAGCGTGTGCTCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPTPSVA*SVCSVV
Trigger: CACCACGGAGCACACGCTCCACGCCACGCTGGGGGT...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR GCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGTCTCGAGGGCTGCCCTaGAGAGCTCCTGGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: LELEGDVGGLVGAQVELGSRGLP*RAPGLG
Trigger: ACCCAGACCAGGAGCTCTGCAGGGCAGCCCTCGAGA...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 90 bp ACGAGCCAGGAGGCCACCAGCTGGTGGCAATCCACGTCCACCAGGTaGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACGCCA +
Preference number: 2 (lower is better)
Translates to: TSQEATSWWQSTSTR*RWTKRLPALRGLTP
Trigger: TGGCGTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCAGCTGGTGGCCTCCTGGCTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTACATCCGACTCGCGGCTaGCGTCCTGGGGCCCCTTGC +
Preference number: 2 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALHPTRG*RPGAPC
Trigger: GCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATG...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCAGGTGGGCACTGAAGTaGAAGGCTGCAGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSRWALK*KAAERR
Trigger: CCGCCTCTCTGCAGCCTTTCACTTCAGTGCCCACCT...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR GCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTTGGGGCCCCTTGCCCTaGCGGGCATGGGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSWGPLP*RAWVSS
Trigger: GCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCA...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR GCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGCTTCCTCAGCCAAGTaGACAGGTCAGCCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQASSAK*TGQPGG
Trigger: CCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR GCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCAGCGCTCGGTCTCTaGTTCCTCAGCCAAGTGCAC +
Preference number: 2 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQPALGL*FLSQVH
Trigger: GTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACAGACAGGCCCCAGCTaGGTGCCGCAGGAAGGACGT +
Preference number: 2 (lower is better)
Translates to: PALGLCFLSQVHRSARWAQTGPS*VPQEGR
Trigger: ACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTG...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR CAA 90 bp GTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGGGCTaGACGCGGCCAAACCCCAGCATGTCTCCACTCACCACCATGTTG +
Preference number: 2 (lower is better)
Translates to: VRCSRPFTTEWTPMG*TRPNPSMSPLTTML
Trigger: CAACATGGTGGTGAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR-3UTR TCA 90 bp GTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGGGCTCCTGCAGGGCTGCTaGACACGTACTCCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: VGQSQVQPALHHRVDADGLLQGC*TRTPAG
Trigger: TCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAG...CCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTCCCGGTAGGCGGCGATaGCCTGTAGGTCCCGCAAGT +
Preference number: 2 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSPGRRR*PVGPAS
Trigger: ACTTGCGGGACCTACAGGTCATCGCCGCCTACCGGG...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWACAPW*WPGSAG
Trigger: GCCTGCTGAGCCTGGCCATCACCACGGAGCACACGC...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGAGGTGGGCACTGAAGTaGAAGGCTGCAGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRRWALK*KAAERR
Trigger: CCGCCTCTCTGCAGCCTTTCACTTCAGTGCCCACCT...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGCAGCCAGGTGGGCACTaGAGTGAAAGGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWQPGGH*SERLQR
Trigger: TCTCTGCAGCCTTTCACTTCAGTGCCCACCTGGCTG...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR TCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACAGCCTTGTGTCCCTTaGCACCCCATCAGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPQPCVP*HPISSP
Trigger: GGGGCTGCTGATGGGGTGTCAAGGGACACAAGGCTG...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR GCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCTCCAGCTGGACCAGCTaGAGTCGTGGCGTCGTTGCG +
Preference number: 2 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLSSWTS*SRGVVA
Trigger: CGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGA...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGTGGGGCCCCTTGCCCTaGCGGGCATGGGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQWGPLP*RAWVSS
Trigger: GCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCA...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CCA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAACGGGTGACCCACGTTaGCCAAAGTCAGGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: GQLACDAGDIHALQGVEVTGDPR*PKSGAA
Trigger: GGCTGCACCTGACTTTGGCCAACGTGGGTCACCCGT...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGACCCCCAGCGTGGCGTaGAGCGTGTGCTCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWTPSVA*SVCSVV
Trigger: CACCACGGAGCACACGCTCCACGCCACGCTGGGGGT...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAAGGGCGGCAGGCGGATaGCCTTCTTCAGGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPRAAGG*PSSGRR
Trigger: TCTCCTTCCTGAAGAAGGCCATCCGCCTGCCGCCCT...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 90 bp CTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCCGTGGGTGCATCCAGGTGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LEGDVGGFLEGRRST*GPLTGSVGASRCSS
Trigger: AGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 90 bp ACTGCGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCCTGCACCATGGCCAGCTGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: TALDFQGDTASMPFS*LNPGEACTMASCPA
Trigger: TGCAGGGCAGCTGGCCATGGTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 90 bp ACGTGGGGCTGCAGCTCCACAGTCAGGCAGAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAACAAGACCTTGGCGTGTTTAGTGGGC +
Preference number: 2 (lower is better)
Translates to: TWGCSSTVRQSTAMG*PPLARNKTLACLVG
Trigger: GCCCACTAAACACGCCAAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGCAGCCCCACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACCTGCTGAAGCTAGCTaGGCGCGTCAAGGCCACATC +
Preference number: 2 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPPAEAS*ARQGHI
Trigger: GATGTGGCCTTGACGCGCTCAGCTAGCTTCAGCAGG...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp CTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTTCATCTGGACGGCAGCAGAACTCCAGCTGGAAGATaGCCGCAAATGCAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: LHSRPALAEEMLHLDGSRTPAGR*PQMQGG
Trigger: GCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGT...TCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGAAGTCCCTCCACTCCTaGCTGTCCACGATGACGCTG +
Preference number: 2 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRKSLHS*LSTMTL
Trigger: CAGCGTCATCGTGGACAGTCAGGAGTGGAGGGACTT...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGCAGGTACTACAAAATaGCCAGCGCTCGGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQAGTTK*PALGLC
Trigger: GCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR TCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTGAGTGGCAGCCCTGCTaGGTTTACAACACGCTCGTC +
Preference number: 2 (lower is better)
Translates to: HHGVRAHGTQACWVSAAAEWQPC*VYNTLV
Trigger: GACGAGCGTGTTGTAAACTCAGCAGGGCTGCCACTC...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCTCGCCCCATCAGACTaGACTGAGCCTAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRLAPSD*TEPREG
Trigger: TCCCTCCCTAGGCTCAGTTCAGTCTGATGGGGCGAG...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTCCCAGACGTCAATCTaGAGGGTCTGCACGGCCAGG +
Preference number: 2 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVSQTSI*RVCTAR
Trigger: CCTGGCCGTGCAGACCCTGCAGATTGACGTCTGGGA...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGTGCTCTCGGCCTTCGTaGGTTCCCGGTAGGCGGCGA +
Preference number: 2 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQCSRPS*VPGRRR
Trigger: TCGCCGCCTACCGGGAACGCACGAAGGCCGAGAGCA...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR GCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGTGCTCTCGGCCTTCGTaGGTTCCCGGTAGGCGGCGA +
Preference number: 2 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWCSRPS*VPGRRR
Trigger: TCGCCGCCTACCGGGAACGCACGAAGGCCGAGAGCA...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR GCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAACACGGAACCCAGGCCTaGTGGGTGTCAGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQHGTQA*WVSAAA
Trigger: AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTG...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGCTCTGGCTGTTCCTTTaGAGGGGGATTGGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRLWLFL*RGIGAG
Trigger: GCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAG...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACTGCGAGGGGTTGGGCTaGATCCCACCCTGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHCEGLG*IPPCRG
Trigger: GCCTCTGCAGGGTGGGATCCAGCCCAACCCCTCGCA...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTTTGCCCTGCCGGGCATaGGTCAGTAGCATGGCAGCC +
Preference number: 2 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSLPCRA*VSSMAA
Trigger: GGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAA...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATCGGCGACCCCCAGCGTaGCGTGGAGCGTGTGCTCCG +
Preference number: 2 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDRRPPA*RGACAP
Trigger: CGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCG...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCAT +
Preference number: 2 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPAANMD*GVLTKH
Trigger: ATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGC...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 90 bp CCAGCATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGC +
Preference number: 2 (lower is better)
Translates to: PACLHSPPCCPARIQ*PRPQARGRPAQPAG
Trigger: GCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR-3UTR TCA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGGGTTGGACAGAGAGGTaGCCGAAGCTGCATTGCCGT +
Preference number: 2 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSGWTER*PKLHCR
Trigger: ACGGCAATGCAGCTTCGGTCACCTCTCTGTCCAACC...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp GGGACCGAGGCGTCTGCATCCACCTTTGAGCACCAACGCCTTGCTGGCAGGGAGCAGCCAGGTGGGCACTaGAGTGAAAGGCTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: GTEASASTFEHQRLAGREQPGGH*SERLQR
Trigger: TCTCTGCAGCCTTTCACTTCAGTGCCCACCTGGCTG...CTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGACGCCTCGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp GAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCCACTGGAAGATGACCGCAAATaGAGGGTGGCCGACCATCTC +
Preference number: 2 (lower is better)
Translates to: EGDVGGFLEGRRSTLGPLEDDRK*RVADHL
Trigger: GAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTC...CAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCACAGTCGTGGCGTCGTTaGGGGTGGGAAGCGGTAGAA +
Preference number: 2 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAQSWRR*GWEAVE
Trigger: TTCTACCGCTTCCCACCCGCAACGACGCCACGACTG...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp GAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCCACTGTCCCGGAGCTGGTCTTaGAAGAGGAGACCACTTTCC +
Preference number: 2 (lower is better)
Translates to: EGDVGGFLEGRRSTLGPLSRSWS*KRRPLS
Trigger: GGAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGA...CAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp ACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCCTTGGCTCCCGGAGCTaGTCTTGGAAGAGGAGACCA +
Preference number: 2 (lower is better)
Translates to: TEWTPMGLTRPNPSMSPLLGSRS*SWKRRP
Trigger: TGGTCTCCTCTTCCAAGACCAGCTCCGGGAGCCAAG...GAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGCTCTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: PMSSRESPSQTSICRVCTLSKGT*VVSWKA
Trigger: GGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAG...CGTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAGCTGACAGCCTCGGCTaGCTGTTTATTGGCATCCAG +
Preference number: 2 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPADSLG*LFIGIQ
Trigger: CTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGC...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACGTTCCTCGGCAGTCCTaGGCCACTCTGCTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHVPRQS*ATLLKA
Trigger: TGCCTTTAGCAGAGTGGCCCAGGACTGCCGAGGAAC...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp TGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACG +
Preference number: 2 (lower is better)
Translates to: WVSSMAASSLSTSASFCAPFTTE*TPMGLT
Trigger: CGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG...AGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTAGGCTGCCACGCAGGTaGAACATGTCCTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: QSGRARRWACHHSLGTRPRLPRR*NMSSST
Trigger: GGTGGAGGAGGACATGTTCCACCTGCGTGGCAGCCT...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGCCTGCAGAGAAGCTCTaGAACTTGAAGGGGACGTGG +
Preference number: 2 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRPAEKL*NLKGTW
Trigger: CCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGG...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CCA 90 bp CCAGCCTTGTGTCCCTTGACACCCCATCAGCAGCCCCTATCCCAGCATAGGCCTGGTCGCCGCAGACCCTaGTCGCTTTGCCACACTCGT +
Preference number: 2 (lower is better)
Translates to: PALCPLTPHQQPLSQHRPGRRRP*SLCHTR
Trigger: ACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACC...AGGCCTATGCTGGGATAGGGGCTGCTGATGGGGTGTCAAGGGACACAAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CCA 90 bp CGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTCTGACCCTTCCCTTGTaGGTCTGGGGGCTTCCGGTC +
Preference number: 2 (lower is better)
Translates to: RSRGPSGGSVSLSLALQGLTLPL*VWGLPV
Trigger: GACCGGAAGCCCCCAGACCCACAAGGGAAGGGTCAG...ACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CAA 90 bp AGGGAGGGACCGAGGCGTCTGCATCCACCTTTGAGCACCAACGCCTaGCTGGCAGGGAGGCTGAGTGGCAGCCCTGCTGAGTTTACAACA +
Preference number: 2 (lower is better)
Translates to: REGPRRLHPPLSTNA*LAGRLSGSPAEFTT
Trigger: TGTTGTAAACTCAGCAGGGCTGCCACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGACGCCTCGGTCCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCCACTTTGGGGCCACTaGCAGGCTCCGTGGGTGCAT +
Preference number: 2 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIPLWGH*QAPWVH
Trigger: ATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGG...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIRQQIR*AAGSLR
Trigger: ACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCG...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACGCTGGCTCCATCGTTTaGGATGACCCGAGATCTGGA +
Preference number: 2 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHAGSIV*DDPRSG
Trigger: TCCAGATCTCGGGTCATCTCAAACGATGGAGCCAGC...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTTCATCTGGACGGCAGCAGAGACCATGTGCATGCATaGCAGGTTGGACAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: LHSRPALAEEMLHLDGSRDHVHA*QVGQRG
Trigger: ACCTCTCTGTCCAACCTGGCATGCATGCACATGGTC...TCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp ACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGAGACCCTGGTCGCTTTaGCACACTCGTCTACACTGC +
Preference number: 2 (lower is better)
Translates to: TLAKVRCSRPFTTEWTPMRPWSL*HTRLHC
Trigger: GCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCT...CATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR GCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTGTCCGCCAGCTTCTGTaGTTGCACCACGTGTTTTCA +
Preference number: 2 (lower is better)
Translates to: HHGVRAHGTQACWVSAAAVRQLL*LHHVFS
Trigger: TGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGAC...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCAAAACCAGAGCTTaGCTCCCGGAGCTGGTCTTG +
Preference number: 2 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPLKTRA*LPELVL
Trigger: CAAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAG...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHRSASR*EIPASN
Trigger: GTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCT...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCTGGCGTCGTTGCGGGTaGGAAGCGGTAGAACTGGAA +
Preference number: 2 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVWRRCG*EAVELE
Trigger: TTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCA...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGCAGGAGGCCACCAGCTaGTGGCAATCCACGTCCACC +
Preference number: 2 (lower is better)
Translates to: LPFARSQHDLKGLGDERLQEATS*WQSTST
Trigger: GGTGGACGTGGATTGCCACCAGCTGGTGGCCTCCTG...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR TCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSACAPW*WPGSAG
Trigger: GCCTGCTGAGCCTGGCCATCACCACGGAGCACACGC...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCGCCCTCACTGGTAGATaGCCTTCACGCAAAATGCCT +
Preference number: 2 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRALTGR*PSRKMP
Trigger: AGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGC...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCAGCGGACCATGTGCATaGATGCCAGGTTGGACAGAG +
Preference number: 2 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVSGPCA*MPGWTE
Trigger: CTCTGTCCAACCTGGCATGCATGCACATGGTCCGCT...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTACCGCAAATGCAGGGTaGCCGACCATCTCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHITANAG*PTISGR
Trigger: CCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGT...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTCCCACATGCGTAGATaGCAGCACCAGAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVSHMRR*QHQSQT
Trigger: GGTCTGGCTCTGGTGCTGCCATCTACGCATGTGGGA...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp TCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTCCACCCACCACAGTCCTaGACGTGGAGTGAAGTCCAG +
Preference number: 2 (lower is better)
Translates to: SGGSVSLSLALQGPMSVLHPPQS*TWSEVQ
Trigger: CTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTG...GAGGACCGACATGGGACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CAA 90 bp AAGGGGTTCCAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTaGGACAGAGAGGTGACCGAAGCTGCATTGCCGTCCACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: KGFQTAQRTMCMHAR*DREVTEAALPSTPA
Trigger: TGCAGGAGTGGACGGCAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 90 bp GGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCACCACCATGTaGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GLTRPNPSMSPLTTM*SCSYSVATTSSSWE
Trigger: CTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR CAA 90 bp TGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTaGCTCAGGCCCTCTAACGAGCAATCCCGGGGCACCATTTTCTAC +
Preference number: 2 (lower is better)
Translates to: CPTHHSPGRGVKSRA*LRPSNEQSRGTIFY
Trigger: GTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGGGCCTGAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CAA 90 bp GACGCTCTGCTGCGCTTTCCAACATCCAAGGCTCTGGCTGTTCCTTaGCAGGGGGATTGGAGCTGGCCTTTCACACTTGGGGCCTCCATC +
Preference number: 2 (lower is better)
Translates to: DALLRFPTSKALAVP*QGDWSWPFTLGASI
Trigger: GATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTGGAAAGCGCAGCAGAGCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp CCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGATCCAGGTGTTCTTCTaGGCCCAGCGAGAACTGGAA +
Preference number: 2 (lower is better)
Translates to: PMSSRESPSQTSICRVCTIQVFF*AQRELE
Trigger: TTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGAT...CGTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGTCTGATTCTTCCTTCTaGGGGTTAAACGTCACAGGT +
Preference number: 2 (lower is better)
Translates to: LELEGDVGGLVGAQVELGSDSSF*GLNVTG
Trigger: ACCTGTGACGTTTAACCCTCAGAAGGAAGAATCAGA...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp TGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTGCAGAGCTCCTGGTCTaGGTTCCCACAACAATAGGG +
Preference number: 2 (lower is better)
Translates to: WVSSMAASSLSTSASFCAAELLV*VPTTIG
Trigger: CCCTATTGTTGTGGGAACCCAGACCAGGAGCTCTGC...AGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCGGCTGGCTGTTTATTaGCATCCAGAATCTCGGGAA +
Preference number: 2 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRRLAVY*HPESRE
Trigger: TTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCG...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTTCAGGGCGCCAGAGCTaGGCTGGCCGGCCTCATCCA +
Preference number: 2 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCSGRQS*AGRPHP
Trigger: TGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCTGA...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 90 bp AACGTCACAGGTTCTGTAGCGCTGACAGCCTCGGCTGGCTGTTTATaGGCATCCAGAATCTCGGGAAAGCCGGAGGACTGCAGGAGCACC +
Preference number: 2 (lower is better)
Translates to: NVTGSVALTASAGCL*ASRISGKPEDCRST
Trigger: GGTGCTCCTGCAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGCGCTACAGAACCTGTGACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 90 bp AAAAATCCCAAACGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTaGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTCTGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: KNPKRSRGPSGGSVS*SLALQGPMSVLCPE
Trigger: CTCAGGGCAGAGGACCGACATGGGACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACGTTTGGGATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR GCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTGTAGGTCCCGCAAGTaGTGTGTGCGGACGCTCTGC +
Preference number: 2 (lower is better)
Translates to: ILLLTPFPSPAANMISKACRSRK*CVRTLC
Trigger: GCAGAGCGTCCGCACACAGCACTTGCGGGACCTACA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR GCA 90 bp CAATTCTGCCCTGAAAAATCCCAAACGTTCCAGAGGACCCTCGGGAGGTTCAGTTCCTCTGCCCTGAGGTaGGCACAGGCAGGCACCCAG +
Preference number: 2 (lower is better)
Translates to: QFCPEKSQTFQRTLGRFSSSALR*AQAGTQ
Trigger: CTGGGTGCCTGCCTGTGCGCACCTCAGGGCAGAGGA...ACTGAACCTCCCGAGGGTCCTCTGGAACGTTTGGGATTTTTCAGGGCAGAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR GCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTACCTCTGACAGGCTGTaGCCGTGTCTTCTCACCATG +
Preference number: 2 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHITSDRL*PCLLTM
Trigger: CATGGTGAGAAGACACGGGCACAGCCTGTCAGAGGT...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATAGGCTGCCACGCAGGTaGAACATGTCCTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDRLPRR*NMSSST
Trigger: GGTGGAGGAGGACATGTTCCACCTGCGTGGCAGCCT...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 90 bp TCACTCTCCTCCTCCCGGGCTGCAGGGAAGTTAGGAACACTTCCCTaGTCTGTCCTCCATCATGAGGCACAGGGAAGTCTCTCCCACGTT +
Preference number: 2 (lower is better)
Translates to: SLSSSRAAGKLGTLP*SVLHHEAQGSLSHV
Trigger: AACGTGGGAGAGACTTCCCTGTGCCTCATGATGGAGGACAGACAAGGGAAGTGTTCCTAACTTCCCTGCAGCCCGGGAGGAGGAGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR TCA 90 bp TGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTTCGCCTTGAGCTTCAGAGCTCATGCTGGCTaGGGGTACCTTGTAGACCAG +
Preference number: 2 (lower is better)
Translates to: CPRPPASVLAPRVFALSFRAHAG*GYLVDQ
Trigger: CTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCT...GAAGCTCAAGGCGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR TCA 90 bp GCTTTGCTCAGGCCCTCTAACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCTGGCGGAGGAGATGCTaGCCCTTCCCTTGTGGGTCT +
Preference number: 2 (lower is better)
Translates to: ALLRPSNEQSRGTIFYKVWRRRC*PFPCGS
Trigger: AGACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCA...GACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGGGCCTGAGCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR GCA 90 bp CACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCATTGCCGTCCACTCCTaGAGGGCTGCTGAACACGTA +
Preference number: 2 (lower is better)
Translates to: HHVVLLVFSCHDLKLVGGIAVHS*RAAEHV
Trigger: TACGTGTTCAGCAGCCCTGCAGGAGTGGACGGCAAT...GCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp AGACCCAGCATCAAAGGTGCCATCTCTGCTCACAGGCACGAGGATGTGGGTCAGGTACCCGACTCCACCTaGTTCACCTCTTCAGAGCTC +
Preference number: 2 (lower is better)
Translates to: RPSIKGAISAHRHEDVGQVPDST*FTSSEL
Trigger: GAGCTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTAC...CTGACCCACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGGGAAAGCCGGAGGACTaGAGGAGCACCATGGAGGCT +
Preference number: 2 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGGKPED*RSTMEA
Trigger: AGCCTCCATGGTGCTCCTGCAGTCCTCCGGCTTTCC...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCTTCCTCAGCCAAGTaGACAGGTCAGCCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTASSAK*TGQPGG
Trigger: CCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGC...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR-3UTR GCA 90 bp TTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGAACGAGGGTCCCACATaGGTAGATGGCAGCACCAGA +
Preference number: 2 (lower is better)
Translates to: FLSTNSKNSATPSVAWSVNEGPT*VDGSTR
Trigger: TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTT...CACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGGGGCATGCAAAGGCGTaGACGGCAGCTCCTGTAACT +
Preference number: 2 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGGHAKA*TAAPVT
Trigger: AGTTACAGGAGCTGCCGTTCACGCCTTTGCATGCCC...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CCCTCACTGGTAGATGACCTTCACGCAAAATGCCTCTTCGTTTTTGTCCTCATGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATC +
Preference number: 2 (lower is better)
Translates to: PSLVDDLHAKCLFVFVLMSPPAS*RRTDLI
Trigger: GATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGA...CATGAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAACTTCAGAGCCTCCCTaGTGTGAAACACATTTTCAC +
Preference number: 2 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAATSEPP*CETHFH
Trigger: GTGAAAATGTGTTTCACAGCAGGGAGGCTCTGAAGT...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATGTGGCCGACCATCTCTaGGAGGCGGAGGCGGCTTCT +
Preference number: 2 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYVADHL*EAEAAS
Trigger: AGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCAC...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGAACACGTACTCCAGCTaGAAGATGACCGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWNTYSS*KMTANA
Trigger: TGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTT...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGGCCCTGCAGAGCTCCTaGTCTGGGTTCCCACAACAA +
Preference number: 2 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGALQSS*SGFPQQ
Trigger: TTGTTGTGGGAACCCAGACCAGGAGCTCTGCAGGGC...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCACCATGTACCTCAGCTaGAAGCCAGGAGACCCAGCA +
Preference number: 2 (lower is better)
Translates to: ILLLTPFPSPAANMISKATMYLS*KPGDPA
Trigger: TGCTGGGTCTCCTGGCTTCCAGCTGAGGTACATGGT...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCCAGCAGCAGCTAAGCTaGATGCAGGTACTACAAAAT +
Preference number: 2 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVQQQLS*MQVLQN
Trigger: ATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 90 bp GCGCTTTCCAACATCCAAGGCTCTGGCTGTTCCTTTGCAGGGGGATaGGAGCTGGCCTTTCACACTTGGGGCCTCCATCAGAATTTCATC +
Preference number: 2 (lower is better)
Translates to: ALSNIQGSGCSFAGG*ELAFHTWGLHQNFI
Trigger: GATGAAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTGGAAAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCCTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTG +
Preference number: 2 (lower is better)
Translates to: ILLLTPFPSPAANMISKALLVFS*HDLKLV
Trigger: CACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAG...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR GCA 90 bp CCAGCCTTGTGTCCCTTGACACCCCATCAGCAGCCCCTATCCCAGCATAGGCCTCACACTCGTCTACACTaGATACGATCACTGCATAGA +
Preference number: 2 (lower is better)
Translates to: PALCPLTPHQQPLSQHRPHTRLH*IRSLHR
Trigger: TCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTG...AGGCCTATGCTGGGATAGGGGCTGCTGATGGGGTGTCAAGGGACACAAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACACAACATCCAAGGCTCTaGCTGTTCCTTTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTQHPRL*LFLCRG
Trigger: CCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTG...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CCA 90 bp AAACACATTTTCACCAAACCCAGGTCTTCCTCTCCAAACCAGGTCTTTCTTTCCCAGACAGGCCCCAGCTaGGTGCCGCAGGAAGGACGT +
Preference number: 2 (lower is better)
Translates to: KHIFTKPRSSSPNQVFLSQTGPS*VPQEGR
Trigger: ACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTG...GGAAAGAAAGACCTGGTTTGGAGAGGAAGACCTGGGTTTGGTGAAAATGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR GCA 90 bp CTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTACTGCATACGATCACTaGATAGACATCGATGATTCC +
Preference number: 2 (lower is better)
Translates to: LHSPPCCPARIQLPRPQATAYDH*IDIDDS
Trigger: GGAATCATCGATGTCTATGCAGTGATCGTATGCAGT...AGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CCA 90 bp CCCTCACTGGTAGATGACCTTCACGCAAAATGCCTCTTCGTTTTTGTCCTCATGCTGGCCTTTCACACTTaGGGCCTCCATCAGAATTTC +
Preference number: 2 (lower is better)
Translates to: PSLVDDLHAKCLFVFVLMLAFHT*GLHQNF
Trigger: GAAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAG...CATGAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGCAGGTACTACAAAATaGCCAGCGCTCGGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDAGTTK*PALGLC
Trigger: GCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGC...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR CCA 72 bp CGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTaGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGC +
Preference number: 3 (lower is better)
Translates to: RLRVASDSRLTS*GPLPCRAWVSS
Trigger: GCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp CTCGTCCCGCGCCGGCCCAAGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATCCGCTCCAGCTTACGC +
Preference number: 3 (lower is better)
Translates to: LVPRRPKSPPAS*RRTDLIRSSLR
Trigger: GCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACTTGGGCCGGCGCGGGACGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp AGGGCGCCAGAGCTGGGCTGGCCGGCCTCATCCAGCTaGACCAGCTGCAGTCGTGGCGTCGTTGCGGGTGGG +
Preference number: 3 (lower is better)
Translates to: RAPELGWPASSS*TSCSRGVVAGG
Trigger: CCCACCCGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp GTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGCATGGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTTCAT +
Preference number: 3 (lower is better)
Translates to: VASDSRLTSWGPLPCRAWHSRPA*AEEMLH
Trigger: ATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTG...CCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp CGACCCCCAGCGTGGCGTGGAGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGCTGGCGATGCTCTCGG +
Preference number: 3 (lower is better)
Translates to: RPPAWRGACAPW*WPGSAGWRCSR
Trigger: CCGAGAGCATCGCCAGCCTGCTGAGCCTGGCCATCACCACGGAGCACACGCTCCACGCCACGCTGGGGGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CAA 90 bp CCCTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTGACC +
Preference number: 3 (lower is better)
Translates to: PFTTEWTPMGLTRPNPSMHSRPA*AEEMLT
Trigger: GGTCAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTG...CATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR GCA 72 bp AAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGTaGTCCGTGGTGATGGCCAGGCTCAGCAGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: KNSATPSVAWSV*SVVMARLSRLA
Trigger: CGCCAGCCTGCTGAGCCTGGCCATCACCACGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp CGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGCATaGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACG +
Preference number: 3 (lower is better)
Translates to: RLTSWGPLPCRA*VSSMAASSLST
Trigger: CGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp CCGGCCTTGGCGGAGGAGATGCTGACCCTTCCCTTGTaGGTCTGGGGGCTTCCGGTCGCCGCAGACCCTGGT +
Preference number: 3 (lower is better)
Translates to: PALAEEMLTLPL*VWGLPVAADPG
Trigger: ACCAGGGTCTGCGGCGACCGGAAGCCCCCAGACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCAAGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp CCGGCCTCCAACGGGAACTCTCGAAGGGGACGTGGGTaGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: PASNGNSRRGRG*FPGRPPLHFGA
Trigger: GGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTTCCCGTTGGAGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp GCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACGCGGCCAAACCCCAGC +
Preference number: 3 (lower is better)
Translates to: AKVRCSRPFTTE*TPMGLTRPNPS
Trigger: GCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR CCA 72 bp GGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATaGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: GAPCPAGHGSVA*QPAHCPRPPAS
Trigger: AGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp TGTGTCCCCCGAAGGACAAGGGACAGGCGGGTCAGCTaGCCTGCGACGCAGGAGACATCCACGCGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: CVPRRTRDRRVS*PATQETSTRCR
Trigger: CCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCTGTCCCTTGTCCTTCGGGGGACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR TCA 72 bp TGCTCTCGGCCTTCGTGCGTTCCCGGTAGGCGGCGATaGCCTGTAGGTCCCGCAAGTGCTGTGTGCGGACGC +
Preference number: 3 (lower is better)
Translates to: CSRPSCVPGRRR*PVGPASAVCGR
Trigger: GCGTCCGCACACAGCACTTGCGGGACCTACAGGTCATCGCCGCCTACCGGGAACGCACGAAGGCCGAGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp CACGGCCAGGTAGCGGGCAAAGCAGCGCCGCTCACCTaGCTTCAGGAACCCAGGGCCCACCATGTACCTCAG +
Preference number: 3 (lower is better)
Translates to: HGQVAGKAAPLT*LQEPRAHHVPQ
Trigger: CTGAGGTACATGGTGGGCCCTGGGTTCCTGAAGCCAGGTGAGCGGCGCTGCTTTGCCCGCTACCTGGCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp TCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTaGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGG +
Preference number: 3 (lower is better)
Translates to: SCSYSVATTSSS*EACTAGRPWRR
Trigger: CCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR GCA 72 bp TTGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTCTaGCCTGAGGTGCGCACAGGCAGGCACCCAGCCTTG +
Preference number: 3 (lower is better)
Translates to: LSLALQGPMSVL*PEVRTGRHPAL
Trigger: CAAGGCTGGGTGCCTGCCTGTGCGCACCTCAGGGCAGAGGACCGACATGGGACCCTGTAGGGCCAGTGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp CTGGCCGGCCTCATCCAGCTGGACCAGCTGCAGTCGTaGCGTCGTTGCGGGTGGGAAGCGGTAGAACTGGAA +
Preference number: 3 (lower is better)
Translates to: LAGLIQLDQLQS*RRCGWEAVELE
Trigger: TTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGATGAGGCCGGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp TCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTaGCGGAGGAGATGCTTCATCTGGACGGCAGCAGAT +
Preference number: 3 (lower is better)
Translates to: SSSWEACTAGRP*RRRCFIWTAAD
Trigger: ATCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp TTGGCGGAGGAGATGCTGACCCTTCCCTTGTGGGTCTaGGGGCTTCCGGTCGCCGCAGACCCTGGTCGCTTT +
Preference number: 3 (lower is better)
Translates to: LAEEMLTLPLWV*GLPVAADPGRF
Trigger: AAAGCGACCAGGGTCTGCGGCGACCGGAAGCCCCCAGACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp AGCCCCTATCCCAGCATAGGCCTCAGTCGAAGCCCCTaGAACGTCCCAGGTGGGACCCTCCTGAGCCACCCA +
Preference number: 3 (lower is better)
Translates to: SPYPSIGLSRSP*NVPGGTLLSHP
Trigger: TGGGTGGCTCAGGAGGGTCCCACCTGGGACGTTCCAGGGGCTTCGACTGAGGCCTATGCTGGGATAGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CAA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCAATGCTGACCCTTCCCTaGTGGGTCTGGGGGCTTCCG +
Preference number: 3 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPMLTLP*WVWGLP
Trigger: CGGAAGCCCCCAGACCCACAAGGGAAGGGTCAGCAT...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR TCA 72 bp GTGGTTCCCCGGGGCCCACATTCTGGGTCTCACAGATaGCGTTCGGGTCGCTGCAGCGAACATGGACTGGGG +
Preference number: 3 (lower is better)
Translates to: VVPRGPHSGSHR*RSGRCSEHGLG
Trigger: CCCCAGTCCATGTTCGCTGCAGCGACCCGAACGTCATCTGTGAGACCCAGAATGTGGGCCCCGGGGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp GAGGACTGCAGGAGCACCATGGAGGCTCTCGAGGGCTaGCCTGCAGAGCTCCTGGTCTGGGTTCCCACAACA +
Preference number: 3 (lower is better)
Translates to: EDCRSTMEALEG*PAELLVWVPTT
Trigger: TGTTGTGGGAACCCAGACCAGGAGCTCTGCAGGGCAGCCCTCGAGAGCCTCCATGGTGCTCCTGCAGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp CCACGCAGGTGGAACATGTCCTCCTCCACCGGTGTGTaGAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCC +
Preference number: 3 (lower is better)
Translates to: PRRWNMSSSTGV*RPAAPLKSLHS
Trigger: GGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTGGAGGAGGACATGTTCCACCTGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTaGTGGGTGTCAGCAGCAGCTAAGCTGGATGCAGGT +
Preference number: 3 (lower is better)
Translates to: HHHGVRAHGTQA*WVSAAAKLDAG
Trigger: ACCTGCATCCAGCTTAGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR GCA 72 bp CACAGGGAAGTCTCTCCCACGTTGGCCAAAGTCAGGTaGAGCCGGCCCTTCACCACCGAGTGGACGCCGATG +
Preference number: 3 (lower is better)
Translates to: HREVSPTLAKVR*SRPFTTEWTPM
Trigger: CATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGTGGGAGAGACTTCCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp GATACCGGCCTCCAACGGGAACTCTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGG +
Preference number: 3 (lower is better)
Translates to: DTGLQRELSKGT*VVSWKAAAPLW
Trigger: CCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTTCCCGTTGGAGGCCGGTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp AGGACCAGGGAGGTCTGGCTCAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAACGGGAACTCTCGAAGG +
Preference number: 3 (lower is better)
Translates to: RTREVWLRSASR*EIPASNGNSRR
Trigger: CCTTCGAGAGTTCCCGTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp ACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTaGAGCGTGTGCTCCGTGGTGATGGCCAGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: TNSKNSATPSVA*SVCSVVMARLS
Trigger: GCTGAGCCTGGCCATCACCACGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp ACCAGCTGGTGGCAATCCACGTCCACCAGGTTGAGATaGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACG +
Preference number: 3 (lower is better)
Translates to: TSWWQSTSTRLR*TKRLPALRGLT
Trigger: CGTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCAGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CAA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGGCAGTCGTGGCGTCGTaGCGGGTGGGAAGCGGTAGA +
Preference number: 3 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQAVVAS*RVGSGR
Trigger: TCTACCGCTTCCCACCCGCAACGACGCCACGACTGC...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACACGCTGAGCTCGGGGTaGTCGATCTCCACAGTCACC +
Preference number: 3 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHTLSSG*SISTVT
Trigger: GGTGACTGTGGAGATCGACAACCCCGAGCTCAGCGT...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CAA 90 bp CCCTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGCAGACCCTGGTCGCTTaGCCACACTCGTCTACACTG +
Preference number: 3 (lower is better)
Translates to: PFTTEWTPMGLTRPNPSMQTLVA*PHSSTL
Trigger: CAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTG...CATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CAA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTTGAGCACCAACGCCTaGCTGGCAGGGAGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSLSTNA*LAGRLS
Trigger: ACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAA...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CAA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTGAGAAGCTCTGGAACTaGAAGGGGACGTGGGCGGTC +
Preference number: 3 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSEKLWN*KGTWAV
Trigger: GACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTC...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CAA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAAC +
Preference number: 3 (lower is better)
Translates to: LPFARSQHDLKGLGDERLSTAMG*PPLARN
Trigger: GTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCT...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR TCA 72 bp GTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCCACTaGCAGGCTCCGTGGGTGCATCCAGGTGTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: VSWKAAAPLWGH*QAPWVHPGVLL
Trigger: CAGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp TGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTaGCTGTCCACGATGACGCTGAGCTCGGGGTTGTCG +
Preference number: 3 (lower is better)
Translates to: CRPAAPLKSLHS*LSTMTLSSGLS
Trigger: CGACAACCCCGAGCTCAGCGTCATCGTGGACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp GCTGAACACGTACTCCAGCTGGAAGATGACCGCAAATaGAGGGTGGCCGACCATCTCTGGGAGGCGGAGGCG +
Preference number: 3 (lower is better)
Translates to: AEHVLQLEDDRK*RVADHLWEAEA
Trigger: CGCCTCCGCCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp GCACTGCGCTGGACTTCCAAGGTGACACGGCGTCCATaGCCTTCTCGTTGCTCAACCCAGGAGAGGCCTGCA +
Preference number: 3 (lower is better)
Translates to: ALRWTSKVTRRP*PSRCSTQERPA
Trigger: TGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCGCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp GCAGCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTaGCACCACTCGCTCGGAACAAGACCTTGGCGTGTT +
Preference number: 3 (lower is better)
Translates to: AAPQSGRARRWA*HHSLGTRPWRV
Trigger: AACACGCCAAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp ACGTACTCCAGCTGGAAGATGACCGCAAATGCAGGGTaGCCGACCATCTCTGGGAGGCGGAGGCGGCTTCTC +
Preference number: 3 (lower is better)
Translates to: TYSSWKMTANAG*PTISGRRRRLL
Trigger: GAGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGTACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp ACAGATGACGTTCGGGTCGCTGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCATTCCCACCGGAGCACC +
Preference number: 3 (lower is better)
Translates to: TDDVRVAAANMD*GVLTKHSHRST
Trigger: GGTGCTCCGGTGGGAATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGCAGCGACCCGAACGTCATCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTaGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACT +
Preference number: 3 (lower is better)
Translates to: HHGVRAHGTQAC*VSAAAKLDAGT
Trigger: AGTACCTGCATCCAGCTTAGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR CCA 72 bp CTTGTGGGTCTGGGGGCTTCCGGTCGCCGCAGACCCTaGTCGCTTTGCCACACTCGTCTACACTGCATACGA +
Preference number: 3 (lower is better)
Translates to: LVGLGASGRRRP*SLCHTRLHCIR
Trigger: TCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACCGGAAGCCCCCAGACCCACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CAA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCTGCATGCATGCCAGGTaGGACAGAGAGGTGACCGAA +
Preference number: 3 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRCMHAR*DREVTE
Trigger: TTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCA...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGT +
Preference number: 3 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPPARIQ*PRPQAR
Trigger: ACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGG...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR-3UTR CAA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTGGACGCCGATGGGCTaGACGCGGCCAAACCCCAGC +
Preference number: 3 (lower is better)
Translates to: ILLLTPFPSPAANMISKAWTPMG*TRPNPS
Trigger: GCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp GATGTAGATCAGGATCTCCTCCTCACCCACTCTCTGACTAGGCGCAAACTGCAAACGTCCTGGGGCCCCTaGCCCTGCCGGGCATGGGTC +
Preference number: 3 (lower is better)
Translates to: DVDQDLLLTHSLTRRKLQTSWGP*PCRAWV
Trigger: GACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGT...TTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGAGGAGATCCTGATCTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CAA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTCGTCTGCATCCACCTTaGAGCACCAACGCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: QSGRARRWACHHSLGTRPRLHPP*STNALL
Trigger: CAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGACG...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR TCA 72 bp GGCGTGTTTAGTGGGCACTGCGCTGGACTTCCAAGGTaGCACGGCGTCCATGCCCTTCTCGTTGCTCAACCC +
Preference number: 3 (lower is better)
Translates to: GVFSGHCAGLPR*HGVHALLVAQP
Trigger: GGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCGCAGTGCCCACTAAACACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp ACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTaGTCAACCCAGGAGAGGCCTGCACCATGGCCAGCT +
Preference number: 3 (lower is better)
Translates to: TSKVTRRPCPSR*STQERPAPWPA
Trigger: AGCTGGCCATGGTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp CTGGGGGCTTCCGGTCGCCGCAGACCCTGGTCGCTTTaGCACACTCGTCTACACTGCATACGATCACTGCAT +
Preference number: 3 (lower is better)
Translates to: LGASGRRRPWSL*HTRLHCIRSLH
Trigger: ATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACCGGAAGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp TGTTCGGCAATGGATGTTTCCAGGACCAGGGAGGTCTaGCTCAGGTCGGCTTCCAGGTGGGAGATACCGGCC +
Preference number: 3 (lower is better)
Translates to: CSAMDVSRTREV*LRSASRWEIPA
Trigger: GGCCGGTATCTCCCACCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCTGGAAACATCCATTGCCGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTACTCCCGGAGCTGGTCTaGGAAGAGGAGACCACTTTC +
Preference number: 3 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALLPELV*EEETTF
Trigger: GAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGAG...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTTCTCAAAACCAGAGCTaGGCTCCCGGAGCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSSQNQS*APGAGL
Trigger: AAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAGA...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCC +
Preference number: 3 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDGRRST*GPLTGS
Trigger: GGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCC...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp ACTGACAGGCTCCGTGGGTGCATCCAGGTGTTCTTCTaGGCCCAGCGAGAACTGGAACCGGAGTGTACCCGA +
Preference number: 3 (lower is better)
Translates to: TDRLRGCIQVFF*AQRELEPECTR
Trigger: TCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp GAGGCTGCCTCCAGAGAAGCGGCTGGCTCCATCGTTTaGGATGACCCGAGATCTGGACGGTGGCAATGTGCT +
Preference number: 3 (lower is better)
Translates to: EAASREAAGSIV*DDPRSGRWQCA
Trigger: AGCACATTGCCACCGTCCAGATCTCGGGTCATCTCAAACGATGGAGCCAGCCGCTTCTCTGGAGGCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp ATCCCAAACGTTCCAGAGGACCCTCGGGAGGTTCAGTaGGCTTGTCACTGGCCCTACAGGGTCCCATGTCGG +
Preference number: 3 (lower is better)
Translates to: IPNVPEDPREVQ*ACHWPYRVPCR
Trigger: CCGACATGGGACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACGTTTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp GAAGATGACCGCAAATGCAGGGTGGCCGACCATCTCTaGGAGGCGGAGGCGGCTTCTCAAAACCAGAGCTTG +
Preference number: 3 (lower is better)
Translates to: EDDRKCRVADHL*EAEAASQNQSL
Trigger: CAAGCTCTGGTTTTGAGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp TCCACTCCTGCAGGGCTGCTGAACACGTACTCCAGCTaGAAGATGACCGCAAATGCAGGGTGGCCGACCATC +
Preference number: 3 (lower is better)
Translates to: STPAGLLNTYSS*KMTANAGWPTI
Trigger: GATGGTCGGCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp GGTGCATCCAGGTGTTCTTCTGAGCCCAGCGAGAACTaGAACCGGAGTGTACCCGACTCCACCTGCTTCACC +
Preference number: 3 (lower is better)
Translates to: GASRCSSEPSEN*NRSVPDSTCFT
Trigger: GGTGAAGCAGGTGGAGTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGATGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp CGGACGCTCTGCTGCGCTTTCCAACATCCAAGGCTCTaGCTGTTCCTTTGCAGGGGGATTGGAGCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: RTLCCAFQHPRL*LFLCRGIGAGL
Trigger: AAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTGGAAAGCGCAGCAGAGCGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CAA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGTGACCGAAGCTGCATaGCCGTCCACTCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDVTEAA*PSTPAG
Trigger: CCCTGCAGGAGTGGACGGCAATGCAGCTTCGGTCAC...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR-3UTR CAA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTACCGTGTGCTGTGTGTaGTGGGGGTTCTTAAGCACA +
Preference number: 3 (lower is better)
Translates to: QSGRARRWACHHSLGTRPTVCCV*WGFLST
Trigger: TGTGCTTAAGAACCCCCACAACACACAGCACACGGT...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR TCA 72 bp GGAGGAGATGCTTCATCTGGACGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCT +
Preference number: 3 (lower is better)
Translates to: GGDASSGRQQIR*AAGSLRPRRQS
Trigger: AGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCGTCCAGATGAAGCATCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp CAGAGAGGTGACCGAAGCTGCATTGCCGTCCACTCCTaGAGGGCTGCTGAACACGTACTCCAGCTGGAAGAT +
Preference number: 3 (lower is better)
Translates to: QRGDRSCIAVHS*RAAEHVLQLED
Trigger: ATCTTCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAGTGGACGGCAATGCAGCTTCGGTCACCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp TCCAGCAAGGGGTTCCAAACAGCCCAGCGGACCATGTaGATGCATGCCAGGTTGGACAGAGAGGTGACCGAA +
Preference number: 3 (lower is better)
Translates to: SSKGFQTAQRTM*MHARLDREVTE
Trigger: TTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTGGAACCCCTTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp TCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTGGGAGGCCTGCACAGC +
Preference number: 3 (lower is better)
Translates to: STHHHVVLLVFS*HDLKLVGGLHS
Trigger: GCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR CCA 72 bp CAGCTGGACCAGCTGCAGTCGTGGCGTCGTTGCGGGTaGGAAGCGGTAGAACTGGAAGGTGAAATACACAGT +
Preference number: 3 (lower is better)
Translates to: QLDQLQSWRRCG*EAVELEGEIHS
Trigger: ACTGTGTATTTCACCTTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCACGACTGCAGCTGGTCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp GCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTaGTTCCCCGGGGCCCACATTCTGGGTCTCACAGAT +
Preference number: 3 (lower is better)
Translates to: AWTTGHLQKYVP*FPGAHILGLTD
Trigger: ATCTGTGAGACCCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR-3UTR CAA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGTGTAGCACCATCTCGTaGCTTTGTAGACAATCTGAT +
Preference number: 3 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRCSTIS*LCRQSD
Trigger: ATCAGATTGTCTACAAAGCAACGAGATGGTGCTACA...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp CTCCACCTGCTTCACCTCTTCAGAGCTCATGCTGGCTaGGGGTACCTTGTAGACCAGACAGTGCGAGGGGTT +
Preference number: 3 (lower is better)
Translates to: LHLLHLFRAHAG*GYLVDQTVRGV
Trigger: AACCCCTCGCACTGTCTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCTGAAGAGGTGAAGCAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR TCA 72 bp TGCCTCCAGAGAAGCGGCTGGCTCCATCGTTTGAGATaGCCCGAGATCTGGACGGTGGCAATGTGCTACAAC +
Preference number: 3 (lower is better)
Translates to: CLQRSGWLHRLR*PEIWTVAMCYN
Trigger: GTTGTAGCACATTGCCACCGTCCAGATCTCGGGTCATCTCAAACGATGGAGCCAGCCGCTTCTCTGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp GAGCTCCTGGTCTGGGTTCCCACAACAATAGGGGCATaGAAAGGCGTGAACGGCAGCTCCTGTAACTGTTCG +
Preference number: 3 (lower is better)
Translates to: ELLVWVPTTIGA*KGVNGSSCNCS
Trigger: CGAACAGTTACAGGAGCTGCCGTTCACGCCTTTGCATGCCCCTATTGTTGTGGGAACCCAGACCAGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR GCA 72 bp TTTTCTACAAAGTCATGGTGCTGGGCCGAGAAGAAATaGGCCTCTTCACTCTCCTCCTCCCGGGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: FSTKSWCWAEKK*ASSLSSSRAAG
Trigger: CCCTGCAGCCCGGGAGGAGGAGAGTGAAGAGGCGCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR GCA 72 bp TGCGCTTTCCAACATCCAAGGCTCTGGCTGTTCCTTTaGAGGGGGATTGGAGCTGGCCTTTCACACTTGGGG +
Preference number: 3 (lower is better)
Translates to: CAFQHPRLWLFL*RGIGAGLSHLG
Trigger: CCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTGGAAAGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR-3UTR CAA 90 bp TGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCAGGTTAGGAACACTTCCCTaGTCTGTCCTCCATCATGAG +
Preference number: 3 (lower is better)
Translates to: CPTHHSPGRGVKSRALLRLGTLP*SVLHHE
Trigger: CTCATGATGGAGGACAGACAAGGGAAGTGTTCCTAA...CCTGAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CAA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATTCCTTTGCAGGGGGATaGGAGCTGGCCTTTCACACT +
Preference number: 3 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDSFAGG*ELAFHT
Trigger: AGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGA...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR GCA 72 bp AACCCCAGCATGTCTCCACTCACCACCATGTTGTCCTaGTCGTATTCAGTTGCCACGACCTCAAGCTCGTGG +
Preference number: 3 (lower is better)
Translates to: NPSMSPLTTMLS*SYSVATTSSSW
Trigger: CCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATGCTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
3UTR GCA 72 bp TACATTTTGAGCAACAGCGATAACGAGGGTCCCACATaGGTAGATGGCAGCACCAGAGCCAGACCCACCACC +
Preference number: 3 (lower is better)
Translates to: YILSNSDNEGPT*VDGSTRARPTT
Trigger: GGTGGTGGGTCTGGCTCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR GCA 72 bp CTGAGCTCGGGGTTGTCGATCTCCACAGTCACCGTGTaGTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCA +
Preference number: 3 (lower is better)
Translates to: LSSGLSISTVTV*CVLWGFLSTNS
Trigger: TGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACGGTGACTGTGGAGATCGACAACCCCGAGCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp AGCAATCCCGGGGCACCATTTTCTACAAAGTCATGGTaGTGGGCCGAGAAGAAATGCGCCTCTTCACTCTCC +
Preference number: 3 (lower is better)
Translates to: SNPGAPFSTKSW*WAEKKCASSLS
Trigger: GGAGAGTGAAGAGGCGCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAATGGTGCCCCGGGATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CCA 72 bp AAACGTCACAGGTTCTGTAGCGCTGACAGCCTCGGCTaGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: KRHRFCSADSLG*LFIGIQNLGKA
Trigger: GGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGCGCTACAGAACCTGTGACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CCA 72 bp ACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCATaGTGCTGGGCCGAGAAGAAATGCGCCTCTTCACTC +
Preference number: 3 (lower is better)
Translates to: TSNPGAPFSTKS*CWAEKKCASSL
Trigger: GAGTGAAGAGGCGCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR-3UTR CAA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCGCCAGCTTCTGTGCTaGCACCACGTGTTTTCATTT +
Preference number: 3 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDRQLLC*HHVFSF
Trigger: AAATGAAAACACGTGGTGCAAGCACAGAAGCTGGCG...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR TCA 72 bp AATTTCATCCTCAGAGCTTTTCAGGAGTGGAACCTCTaGCAGGCTGTGCCCGTGTCTTCTCACCATGCCTCT +
Preference number: 3 (lower is better)
Translates to: NFILRAFQEWNL*QAVPVSSHHAS
Trigger: AGAGGCATGGTGAGAAGACACGGGCACAGCCTGTCAGAGGTTCCACTCCTGAAAAGCTCTGAGGATGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CCA 72 bp TTGTCGATCTCCACAGTCACCGTGTGCTGTGTGTTGTaGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCG +
Preference number: 3 (lower is better)
Translates to: LSISTVTVCCVL*GFLSTNSKNSA
Trigger: CGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACGGTGACTGTGGAGATCGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CCA 72 bp TCCTTTGCAGGGGGATTGGAGCTGGCCTTTCACACTTaGGGCCTCCATCAGAATTTCATCCTCAGAGCTTTT +
Preference number: 3 (lower is better)
Translates to: SFAGGLELAFHT*GLHQNFILRAF
Trigger: AAAAGCTCTGAGGATGAAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR TCA 72 bp CGCAAAATGCCTCTTCGTTTTTGTCCTCATGGTCATTaGTGTAGATCAGGATCTCCTCCTCACCCACTCTCT +
Preference number: 3 (lower is better)
Translates to: RKMPLRFCPHGH*CRSGSPPHPLS
Trigger: AGAGAGTGGGTGAGGAGGAGATCCTGATCTACATCAATGACCATGAGGACAAAAACGAAGAGGCATTTTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR GCA 72 bp CTCAAGCCCTCACTGGTAGATGACCTTCACGCAAAATaGCTCTTCGTTTTTGTCCTCATGGTCATTGATGTA +
Preference number: 3 (lower is better)
Translates to: LKPSLVDDLHAK*LFVFVLMVIDV
Trigger: TACATCAATGACCATGAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGCTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR TCA 72 bp ATCTCGTTGCTTTGTAGACAATCTGATTCTTCCTTCTaGGGGTTAAACGTCACAGGTTCTGTAGCGCTGACA +
Preference number: 3 (lower is better)
Translates to: ISLLCRQSDSSF*GLNVTGSVALT
Trigger: TGTCAGCGCTACAGAACCTGTGACGTTTAACCCTCAGAAGGAAGAATCAGATTGTCTACAAAGCAACGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGCGGCGACCCCCAGCGTaGCGTGGAGCGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: HDLKLVGGLHSRPALAEERRPPA*RGACAP
Trigger: CGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCG...CTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp AGGCGGGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGCTGGCCAAGCAGTGCTaGGTCGGGGACCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRVSWPATQETSTRCREWLAKQC*VGDRGE
Trigger: CTCCCCGCGGTCCCCGACTCAGCACTGCTTGGCCAG...CCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 72 bp GTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTaGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VASDSRLTSWGP*PCRAWVSSMAA
Trigger: GGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGACGGAGCCACAAGCCTaGGGACCGAGGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: HDLKLVGGLHSRPALAEETEPQA*GPRTGR
Trigger: TCGGCCAGTCCTCGGTCCTCAGGCTTGTGGCTCCGT...CTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCATCCGACTCGCGGCTaGCGTCCTGGGGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQHPTRG*RPGAPC
Trigger: GCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGAGGTGGGCACTGAAGTaGAAGGCTGCAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRRWALK*KAAERR
Trigger: CCGCCTCTCTGCAGCCTTTCACTTCAGTGCCCACCT...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTCGTGGGAGGCCTaGACAGCCGGCCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSSSWEA*TAGRPW
Trigger: CCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCT...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGTGTAGGTCCCGCAAGTaGTGTGTGCGGACGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRCRSRK*CVRTLC
Trigger: GCAGAGCGTCCGCACACAGCACTTGCGGGACCTACA...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGTCAGCAGGCTGGCGATaGTCTCGGCCTTCGTGCGTT +
Preference number: 4 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRSAGWR*SRPSCV
Trigger: AACGCACGAAGGCCGAGAGCATCGCCAGCCTGCTGA...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGTCGCGGCTGACGTCCTaGGGCCCCTTGCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQSRLTS*GPLPCR
Trigger: CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGA...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGTTCATCCTGCCCGCCTaGGGGTCCCGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQFILPA*GSRGLP
Trigger: GGGAAGCCCACGGGACCCTCAGGCGGGCAGGATGAA...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCGGACGCCGATGGGCTTaGCGCGGCCAAACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAGRRWA*RGQTPA
Trigger: TGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCC...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCACATCCGACTCGCGGCTaGCGTCCTGGGGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAAHPTRG*RPGAPC
Trigger: GCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATG...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TGTGCGGACGCTCTGCTGCGCCAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCAAAGGCCTTGGAGATaGGCGGCTGGCGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CADALLRQHARPAPAQVSQRPWR*AAGGSR
Trigger: TCTGCTGCCGCCAGCCGCTCATCTCCAAGGCCTTTG...GGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGGCGCAGCAGAGCGTCCGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAACGGGAACTCCTGTaGCTGGGCCGGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQQRELL*LGRGGL
Trigger: CAGGCCTCCCCGGCCCAGGCACAGGAGTTCCCGTTG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS-3UTR GCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGCTCCAACGGGAACTCTaGCTGGGCCGGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LELEGDVGGLVGAQVELGLQREL*LGRGGL
Trigger: CAGGCCTCCCCGGCCCAGGCAGAGTTCCCGTTGGAG...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGCTGAGGACCGAGGACTaGCCGAGGGGCGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALLRTED*PRGAPR
Trigger: ACGGGGCGCGCCCCTCGGCCAGTCCTCGGTCCTCAG...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTGAGGACCGAGGACTaGCCGAGGGGCGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPLRTED*PRGAPR
Trigger: ACGGGGCGCGCCCCTCGGCCAGTCCTCGGTCCTCAG...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp AGCTTACGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGGGTGCAGGAGGGCTCTaGGGGTGCCATGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: SLRLRVASDSRLTSWGPLGAGGL*GCHGTA
Trigger: GGCTGTACCATGGCACCCCCAGAGCCCTCCTGCACC...CAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCGTAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACGTGGCCGACCATCTCTaGGAGGCGGAGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHVADHL*EAEAAS
Trigger: AGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCAC...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTCAGGGCGCCAGAGCTaGGCTGGCCGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSSGRQS*AGRPHP
Trigger: TGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCTGA...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACCCAGGCTCAGCAGGCTaGCGATGCTCTCGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHPGSAG*RCSRPS
Trigger: CGAAGGCCGAGAGCATCGCCAGCCTGCTGAGCCTGG...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTGCCGGCCCTAAGGGGCCTCACGCCAACATGCAGGTCCTGCACCCCACGAGGGGCAGAGCACGGCGATaGGCTTGCCACCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: AAGPKGPHANMQVLHPTRGRARR*ACHHSL
Trigger: GAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCC...CCTCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCCCCTTAGGGCCGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGCATGGTCCACCAGGTTGAGATaGACAAAGCGGCTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VASDSRLTSWGPLPCRAWSTRLR*TKRLPA
Trigger: GGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGA...CCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACCAGACAGGCCCCAGCTaGGTGCCGCAGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHQTGPS*VPQEGR
Trigger: ACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTG...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCCGGTAGGCGGCGATaGCCTGTAGGTCCCGCAAGT +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQPGRRR*PVGPAS
Trigger: ACTTGCGGGACCTACAGGTCATCGCCGCCTACCGGG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGGCCAAGCAGTGCTaGGTCGGGGACCGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWALAKQC*VGDRGE
Trigger: CTCCCCGCGGTCCCCGACTCAGCACTGCTTGGCCAG...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCATGGGCCGGGGAGGCCTaGGAGCCATGGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPWAGEA*EPWGSC
Trigger: ACAGCTACCCCATGGCTCTCAGGCCTCCCCGGCCCA...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp AGCTTACGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCAGAGCCCAGCGCCTTaGGCTTCCAGTCGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLRLRVASDSRLTSWGPLQSPAP*ASSREE
Trigger: CTCCTCACGACTGGAAGCTCAAGGCGCTGGGCTCTG...CAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCGTAAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp GGCAGCCCTGCTGAGTTTACAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCCGAGGCTCTCGAGGGCTaGCCTGCAGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSPAEFTTRSSRAGPSLPEALEG*PAELLV
Trigger: GACCAGGAGCTCTGCAGGGCAGCCCTCGAGAGCCTC...GGGGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGTAAACTCAGCAGGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp ACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGAGCTCGTGGGAGGCCTaGACAGCCGGCCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TLAKVRCSRPFTTEWTPMSSWEA*TAGRPW
Trigger: CCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCT...CATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR GCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCGCTCCAGCTTACGCCTaGGGGTGGCATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAAPAYA*GWHPTR
Trigger: GCGAGTCGGATGCCACCCGCAGGCGTAAGCTGGAGC...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATC +
Preference number: 4 (lower is better)
Translates to: LELEGDVGGLVGAQVELGSPPAS*RRTDLI
Trigger: GATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGA...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCCCCGCAAGTGCTGTGTaGGGACGCTCTGCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAPASAV*GRSAAP
Trigger: TGGCGCAGCAGAGCGTCCGCACACAGCACTTGCGGG...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGTGCTCTCGGCCTTCGTaGGTTCCCGGTAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLCSRPS*VPGRRR
Trigger: TCGCCGCCTACCGGGAACGCACGAAGGCCGAGAGCA...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCGTGGCGTGGAGCGTGTaGTCCGTGGTGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSVAWSV*SVVMAR
Trigger: CCTGGCCATCACCACGGAGCACACGCTCCACGCCAC...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCCAACATGCAGGTCCTaGACCCCACGAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSPTCRS*TPRGGS
Trigger: GCTGCCGCCTCGTGGGGTGCAGGACCTGCATGTTGG...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTCAGGCCCCAGCTGGGTaGCGCAGGAAGGACGTCACC +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAAQAPAG*RRKDVT
Trigger: GGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTG...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGTGCTCTGCGGGGTCCTaGAGAAGCGGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLCSAGS*RSGCRR
Trigger: CCTCCTGCACCCGCTTCTCCAGGACCCCGCAGAGCA...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCTGCTCTGCGGGGTCCTaGAGAAGCGGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYACSAGS*RSGCRR
Trigger: CCTCCTGCACCCGCTTCTCCAGGACCCCGCAGAGCA...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTGCCGGCCCTAAGGGGCCTCACGCCAACATGCAGGTCCTGCACCCCACGAGGACTGCAGGAGCACCATaGAGGCTCTCGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AAGPKGPHANMQVLHPTRTAGAP*RLSRAA
Trigger: GGCAGCCCTCGAGAGCCTCCATGGTGCTCCTGCAGT...CCTCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCCCCTTAGGGCCGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCGCGCCAGAGCTGGGCTaGCCGGCCTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVAPELG*PASSSW
Trigger: CCAGCTGGATGAGGCCGGCCAGCCCAGCTCTGGCGC...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCATCGCGGCTGACGTCCTaGGGCCCCTTGCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPSRLTS*GPLPCR
Trigger: CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGA...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTCGGCGACCCCCAGCGTaGCGTGGAGCGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSRRPPA*RGACAP
Trigger: CGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCG...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAACTTGAAGGGGACGTaGGCGGTCTCGTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSNLKGT*AVSWGR
Trigger: GCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTT...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGGCAGAGCACGGCGATaGGCTTGCCACCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWGRARR*ACHHSL
Trigger: GAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCC...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGACAGGCGGGTCAGCTaGCCTGCGACGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQDRRVS*PATQET
Trigger: TGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCTGTC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR CAA 72 bp CTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTGACCCTTCCCTTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LKLVGGLHSRPA*AEEMLTLPLWV
Trigger: GACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCACTTTGGGGCCACTaGCAGGCTCCGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQPLWGH*QAPWVH
Trigger: ATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCGGACGCCGATGGGCTTaGCGCGGCCAAACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGGRRWA*RGQTPA
Trigger: TGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCC...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGCCTGGGGATGAGAGGTaGAAGCTCTCACTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRPGDER*KLSLSS
Trigger: TGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGG...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGCAAAGGCCTTGGAGATaGGCGGCTGGCGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LELEGDVGGLVGAQVELGQRPWR*AAGGSR
Trigger: TCTGCTGCCGCCAGCCGCTCATCTCCAAGGCCTTTG...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp AGGCGGGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGCGCCAGCTGGGAAATTaGCAACCCTGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RRVSWPATQETSTRCREWRQLGN*QPWSHR
Trigger: CCTGTGGGACCAGGGTTGTCAATTTCCCAGCTGGCG...CCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAGCCAGTCGTTCATCCTaGCCGCCTGAGGGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPASRSS*PPEGPV
Trigger: CACGGGACCCTCAGGCGGGCAGGATGAACGACTGGC...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGGGAGGGCTCTGGGGGTaGCATGGTACAGCCGCAACC +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQGGLWG*HGTAAT
Trigger: GGTTGCGGCTGTACCATGGCACCCCCAGAGCCCTCC...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGAAGCCCAGACCATTGTaGACGCCCACACGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQKPRPL*TPTRRR
Trigger: GCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTT...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGAAGCCCAGACCATTGTaGACGCCCACACGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LELEGDVGGLVGAQVELGKPRPL*TPTRRR
Trigger: GCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTT...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAAGCTCGTGGGAGGCCTaGACAGCCGGCCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAASSWEA*TAGRPW
Trigger: CCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCT...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTGTGGCGTGGAGCGTGTaGTCCGTGGTGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAAVAWSV*SVVMAR
Trigger: CCTGGCCATCACCACGGAGCACACGCTCCACGCCAC...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCGGCCTCACGCCAACATaGAGGTCCTGCACCCCACGA +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSGLTPT*RSCTPR
Trigger: TCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCC...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGTCCGGGTGGTCGCTGTaGAGGTGGAATGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQSGWSL*RWNVLR
Trigger: CCGGAGGACATTCCACCTGCACAGCGACCACCCGGA...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCACGGAACCCAGGCCTaGTGGGTGTCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLHGTQA*WVSAAA
Trigger: AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTG...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGTCCTCTGCCCTGAGGTaGGCACAGGCAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALSSALR*AQAGTQ
Trigger: CTGGGTGCCTGCCTGTGCGCACCTCAGGGCAGAGGA...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACGATTCCTTCCAAGGCTaGCGCGCTCTCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHDSFQG*RALCGW
Trigger: CCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATC...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGGTGCAGGAGGGCTCTaGGGGTGCCATGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: GQLACDAGDIHALQGVEVGAGGL*GCHGTA
Trigger: GGCTGTACCATGGCACCCCCAGAGCCCTCCTGCACC...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCTCCAGGGCCGGGTGTaGCTTCAGCGTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQLQGRV*LQRVLQ
Trigger: CTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCATGCGAGGGGTTGGGCTaGATCCCACCCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAACEGLG*IPPCRG
Trigger: GCCTCTGCAGGGTGGGATCCAGCCCAACCCCTCGCA...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGACAGTGCGAGGGGTTaGGCTGGATCCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSDSARG*AGSHPA
Trigger: TGCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTC...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGAGGACCAGGGAGGTCTaGCTCAGGTCGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQRTREV*LRSASR
Trigger: CCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGACCAGCTGCAGTCGTaGCGTCGTTGCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQDQLQS*RRCGWE
Trigger: TTCCCACCCGCAACGACGCCACGACTGCAGCTGGTC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCATCAGGGCGCCAGAGCTaGGCTGGCCGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPSGRQS*AGRPHP
Trigger: TGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCTGA...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTCAGGGCGCCAGAGCTaGGCTGGCCGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGSGRQS*AGRPHP
Trigger: TGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCTGA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCACAGGCACGAGGATGTaGGTCAGGGCGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSTGTRM*VRAPEL
Trigger: CAGCTCTGGCGCCCTGACCCACATCCTCGTGCCTGT...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSPFTTE*TPMGLT
Trigger: CGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGAACTTGAAGGGGACGTaGGCGGTCTCGTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALNLKGT*AVSWGR
Trigger: GCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTT...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGACCTGGTCCACCACGTaGGGCTGCAGCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWTWSTT*GCSSTV
Trigger: GACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGT...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTGCCGGCCCTAAGGGGCCTCACGCCAACATGCAGGTCCTGCACCCCACGAGGAGGGCGGCAGGCGGATaGCCTTCTTCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AAGPKGPHANMQVLHPTRRAAGG*PSSGRR
Trigger: TCTCCTTCCTGAAGAAGGCCATCCGCCTGCCGCCCT...CCTCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCCCCTTAGGGCCGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGTCCCACCGGAGCACCTaGAAATGTGTGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLSHRST*KCVPGR
Trigger: CCGCCCTGGCACACATTTCCAGGTGCTCCGGTGGGA...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGGACAGGCGGGTCAGCTaGCCTGCGACGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQDRRVS*PATQET
Trigger: TGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCTGTC...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCAGGAGGCCACCAGCTaGTGGCAATCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLQEATS*WQSTST
Trigger: GGTGGACGTGGATTGCCACCAGCTGGTGGCCTCCTG...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCCAGGAGGCCACCAGCTaGTGGCAATCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAQEATS*WQSTST
Trigger: GGTGGACGTGGATTGCCACCAGCTGGTGGCCTCCTG...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGCGCAGCAGCTCCGGGTaGTCGCTGTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWRSSSG*SLCRWN
Trigger: ATTCCACCTGCACAGCGACCACCCGGAGCTGCTGCG...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGCAGCCCTGCTGAGTTTACAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCCGGGCCACATCCCTCCTaGAAGTGGTCCTGGACGTGG +
Preference number: 4 (lower is better)
Translates to: GSPAEFTTRSSRAGPSLPGPHPS*KWSWTW
Trigger: CCACGTCCAGGACCACTTCCAGGAGGGATGTGGCCC...GGGGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGTAAACTCAGCAGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 72 bp GACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCCGTGGGTGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DVGGFLEGRRST*GPLTGSVGASR
Trigger: CCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 72 bp CTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTTCATCTGGACGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LKLVGGLHSRPA*AEEMLHLDGSR
Trigger: TCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGTCCGTCCAGCCACTTaGGGACACACTGGAATGCCG +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSVRPAT*GHTGMP
Trigger: CGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGAC...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGTTGGACAGAGAGGTaGCCGAAGCTGCATTGCCGT +
Preference number: 4 (lower is better)
Translates to: QLPRPQARGRPAQPAGLGGWTER*PKLHCR
Trigger: ACGGCAATGCAGCTTCGGTCACCTCTCTGTCCAACC...GCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGCGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALRQQIR*AAGSLR
Trigger: ACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCG...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR TCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQRQQIR*AAGSLR
Trigger: ACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCG...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAACAPW*WPGSAG
Trigger: GCCTGCTGAGCCTGGCCATCACCACGGAGCACACGC...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGCTGGACTTCCAAGGTaGCACGGCGTCCATGCCCTT +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSAGLPR*HGVHAL
Trigger: AAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGC...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCTCTGGGTCTCACAGATaGCGTTCGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSSGSHR*RSGRCS
Trigger: GCTGCAGCGACCCGAACGTCATCTGTGAGACCCAGA...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCTCGCCGGATTCTCCATaGGCTGGAAGCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSSPDSP*AGSRPG
Trigger: ACCTGGCCTGCTTCCAGCTCATGGAGAATCCGGCGA...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGTCGCCGGATTCTCCATaGGCTGGAAGCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLSPDSP*AGSRPG
Trigger: ACCTGGCCTGCTTCCAGCTCATGGAGAATCCGGCGA...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTCATCCAAGTGCCCCGTaGTGGGCTTCTGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAAHPSAP*WASGGE
Trigger: CTCGCCTCCAGAAGCCCATCACGGGGCACTTGGATG...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAACCCTGGTCCCACAGGTaGGTTCTGCGGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQPWSHR*VLRGSE
Trigger: CTCGCTGCCCCGCAGAACTCACCTGTGGGACCAGGG...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCCAGGTGGGACCCTCCTaGGCCACCCAACCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVQVGPS*ATQPTC
Trigger: ACAGGTGGGTTGGGTGGCTCAGGAGGGTCCCACCTG...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGGAAAGCCGGAGGACTaGAGGAGCACCATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSGKPED*RSTMEA
Trigger: AGCCTCCATGGTGCTCCTGCAGTCCTCCGGCTTTCC...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCAGTCGTGGCGTCGTTaGGGGTGGGAAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLQSWRR*GWEAVE
Trigger: TTCTACCGCTTCCCACCCGCAACGACGCCACGACTG...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCTCCCAGACGTCAATCTaGAGGGTCTGCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSSQTSI*RVCTAR
Trigger: CCTGGCCGTGCAGACCCTGCAGATTGACGTCTGGGA...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGCTCCAGCTTACGCCTaGGGGTGGCATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAAPAYA*GWHPTR
Trigger: GCGAGTCGGATGCCACCCGCAGGCGTAAGCTGGAGC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATC +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALSPPAS*RRTDLI
Trigger: GATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGA...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGGTGGCGTGGAGCGTGTaGTCCGTGGTGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVVAWSV*SVVMAR
Trigger: CCTGGCCATCACCACGGAGCACACGCTCCACGCCAC...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGTCCTCCACCGGTGTGTaGAGGCCAGCAGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRSSTGV*RPAAPL
Trigger: CAAGGGTGCTGCTGGCCTGCACACACCGGTGGAGGA...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGTGCACCATGGCCAGCTaGCCTGCAGAGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWCTMAS*PAEKLW
Trigger: CCAGAGCTTCTCTGCAGGGCAGCTGGCCATGGTGCA...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACGTGACACGGCGTCCATaGCCTTCTCGTTGCTCAACC +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHVTRRP*PSRCST
Trigger: GGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCAC...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCGCGGGTCAGCTGGCCTaGGACGCAGGAGACATCCAC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGAGQLA*DAGDIH
Trigger: GTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGC...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGCCAACATGCAGGTCCTaGACCCCACGAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLAKVRCSRPFTTEWTPMPTCRS*TPRGGS
Trigger: GCTGCCGCCTCGTGGGGTGCAGGACCTGCATGTTGG...CATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCCCCACAGGTGAGTTCTaGGGGGCAGCGAGAACTCGA +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSPTGEF*GAARTR
Trigger: TCGAGTTCTCGCTGCCCCGCAGAACTCACCTGTGGG...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCCCAGCGCTCGGTCTCTaGTTCCTCAGCCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSPALGL*FLSQVH
Trigger: GTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTGACCCTTCCCAGACCCTGGTCGCTTTaGCACACTCGTCTACACTGC +
Preference number: 4 (lower is better)
Translates to: VGGLHSRPALAEEMLTLPRPWSL*HTRLHC
Trigger: GCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCT...GGGAAGGGTCAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGATAGGAGAGTCCGGCTaGTTGCTGAAGATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRIGESG*LLKIRR
Trigger: TCTTCGGATCTTCAGCAACCAGCCGGACTCTCCTAT...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCGGTGCAGGAGGGCTCTaGGGGTGCCATGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGGAGGL*GCHGTA
Trigger: GGCTGTACCATGGCACCCCCAGAGCCCTCCTGCACC...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCATGCTCTGCGGGGTCCTaGAGAAGCGGGTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPCSAGS*RSGCRR
Trigger: CCTCCTGCACCCGCTTCTCCAGGACCCCGCAGAGCA...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGCTCCAGGGCCGGGTGTaGCTTCAGCGTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRLQGRV*LQRVLQ
Trigger: CTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAG...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGTGGCCGACCATCTCTaGGAGGCGGAGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAVADHL*EAEAAS
Trigger: AGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCAC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTGCGAGGGGTTGGGCTaGATCCCACCCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGCEGLG*IPPCRG
Trigger: GCCTCTGCAGGGTGGGATCCAGCCCAACCCCTCGCA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACAGACAGGCCCCAGCTGGGTGCCGCAGGAAGGACGTCACCCTCAAGCCCTCACGACAGTGCGAGGGGTTaGGCTGGATCCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: TDRPQLGAAGRTSPSSPHDSARG*AGSHPA
Trigger: TGCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTC...GTGAGGGCTTGAGGGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGAGCCCAGCGAGAACTaGAACCGGAGTGTACCCGAC +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQEPSEN*NRSVPD
Trigger: GTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGACGTGGGTGGTTTCCTaGAAGGCCGCCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWTWVVS*KAAAPL
Trigger: AAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGT...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTAGGACCAGGGAGGTCTaGCTCAGGTCGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAARTREV*LRSASR
Trigger: CCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTACAGCCGGCCGGCCTTaGCGGAGGAGATGCTTCATC +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAATAGRP*RRRCFI
Trigger: GATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGT...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACGACCTCAAGCTCGTaGGAGGCCTGCACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGTTSSS*EACTAG
Trigger: GCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGACGACCTCAAGCTCGTaGGAGGCCTGCACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TLAKVRCSRPFTTEWTPMTTSSS*EACTAG
Trigger: GCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGT...CATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCACGGGTGACCCACGTTaGCCAAAGTCAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSTGDPR*PKSGAA
Trigger: GGCTGCACCTGACTTTGGCCAACGTGGGTCACCCGT...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGAGGGCGGCAGGCGGATaGCCTTCTTCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLRAAGG*PSSGRR
Trigger: TCTCCTTCCTGAAGAAGGCCATCCGCCTGCCGCCCT...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGGGCGGCAGGCGGATaGCCTTCTTCAGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSRAAGG*PSSGRR
Trigger: TCTCCTTCCTGAAGAAGGCCATCCGCCTGCCGCCCT...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGTCCCACCGGAGCACCTaGAAATGTGTGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRSHRST*KCVPGR
Trigger: CCGCCCTGGCACACATTTCCAGGTGCTCCGGTGGGA...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGGACAGGCGGGTCAGCTaGCCTGCGACGCAGGAGACA +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVDRRVS*PATQET
Trigger: TGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCTGTC...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 72 bp GAGGCCACCAGCTGGTGGCAATCCACGTCCACCAGGTaGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: EATSWWQSTSTR*RWTKRLPALRG
Trigger: GCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCAGCTGGTGGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTACGGAGCCACAAGCCTaGGGACCGAGGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: QSGRARRWACHHSLGTRPTEPQA*GPRTGR
Trigger: TCGGCCAGTCCTCGGTCCTCAGGCTTGTGGCTCCGT...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGGTCCGTCCAGCCACTTaGGGACACACTGGAATGCCG +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRVRPAT*GHTGMP
Trigger: CGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGAC...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp AGGCGGGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGATGGCATTCAACCTCTaGCAGTACCTCCAGCACGCC +
Preference number: 4 (lower is better)
Translates to: RRVSWPATQETSTRCREWMAFNL*QYLQHA
Trigger: GGCGTGCTGGAGGTACTGTCAGAGGTTGAATGCCAT...CCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GCTGCCGGCCCTAAGGGGCCTCACGCCAACATGCAGGTCCTGCACCCCACGAGGAGAGCTCATGCTGGCTaGGGGTACCTTGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: AAGPKGPHANMQVLHPTRRAHAG*GYLVDQ
Trigger: CTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCT...CCTCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCCCCTTAGGGCCGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp ACCTGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCGGACGCCGATGGGCTTaGCGCGGCCAAACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: TCPTHHSPGRGVKSRALLGRRWA*RGQTPA
Trigger: TGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCC...GAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCAAGTCCCTCCACTCCTaGCTGTCCACGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSKSLHS*LSTMTL
Trigger: CAGCGTCATCGTGGACAGTCAGGAGTGGAGGGACTT...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCAAGTCCCTCCACTCCTaGCTGTCCACGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAKSLHS*LSTMTL
Trigger: CAGCGTCATCGTGGACAGTCAGGAGTGGAGGGACTT...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAGGCCAGCAGCACCCTTaGAGTCCCTCCACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: APQSGRARRWACHHSLGTGQQHP*SPSTPD
Trigger: GTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCC...TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGAGAAGCTCTGGAACTTaGAGGGGACGTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWRSSGT*RGRGRS
Trigger: AGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCT...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGCAAAGGCCTTGGAGATaGGCGGCTGGCGGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALQRPWR*AAGGSR
Trigger: TCTGCTGCCGCCAGCCGCTCATCTCCAAGGCCTTTG...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGCGCCCGCAGCCAACATaGTCTCAAAGGCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWRPQPT*SQRPWR
Trigger: TCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCG...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAAGGTGGGCACTGAAGTaGAAGGCTGCAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAARWALK*KAAERR
Trigger: CCGCCTCTCTGCAGCCTTTCACTTCAGTGCCCACCT...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCCAGCCTTGTGTCCCTTaGCACCCCATCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVQPCVP*HPISSP
Trigger: GGGGCTGCTGATGGGGTGTCAAGGGACACAAGGCTG...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTTCCTGGAGAAGCGGGTaGAGGAGGGCTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QSGRARRWACHHSLGTRPSWRSG*RRALGV
Trigger: CACCCCCAGAGCCCTCCTGCACCCGCTTCTCCAGGA...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCGTGTCTGTTTTGCTCTaGGGGGTCCTGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSVSVLL*GVLEKR
Trigger: CCGCTTCTCCAGGACCCCGCAGAGCAAAACAGACAC...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGCGGGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGCAGGCCAGGTATCTaGTGCAGACCAGACACCAGA +
Preference number: 4 (lower is better)
Translates to: RRVSWPATQETSTRCREWSRPGI*CRPDTR
Trigger: TCTGGTGTCTGGTCTGCAGCAGATACCTGGCCTGCT...CCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGAGGCTCTCGAGGGCTaGCCTGCAGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SCPAEKLWNLKGTWAVSWEALEG*PAELLV
Trigger: GACCAGGAGCTCTGCAGGGCAGCCCTCGAGAGCCTC...CCACGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTGACCCTTCCCACCCAGCATCAAAGGTaGCATCTCTGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: VGGLHSRPALAEEMLTLPTQHQR*HLCSQA
Trigger: TGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGT...GGGAAGGGTCAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACTGGGGCCCCTTGCCCTaGCGGGCATGGGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHWGPLP*RAWVSS
Trigger: GCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCA...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTTCAGCAGGCTGGCGATaGTCTCGGCCTTCGTGCGTT +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAASAGWR*SRPSCV
Trigger: AACGCACGAAGGCCGAGAGCATCGCCAGCCTGCTGA...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGCCATGCCCTTCTCGTTaGTCAACCCAGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LELEGDVGGLVGAQVELGPCPSR*STQERP
Trigger: AGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGG...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGCACGGCGATGGGCTTaGCACCACTCGCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAARRWA*HHSLGT
Trigger: TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGGCACGGCGATGGGCTTaGCACCACTCGCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALARRWA*HHSLGT
Trigger: TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGC...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGCGGGTCAGCTGGCCTaGGACGCAGGAGACATCCAC +
Preference number: 4 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQAGQLA*DAGDIH
Trigger: GTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGC...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCGGGTCAGCTGGCCTaGGACGCAGGAGACATCCAC +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAAGQLA*DAGDIH
Trigger: GTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGC...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp ACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCGGCCTCACGCCAACATaGAGGTCCTGCACCCCACGA +
Preference number: 4 (lower is better)
Translates to: TEWTPMGLTRPNPSMSPLGLTPT*RSCTPR
Trigger: TCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCC...GAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTTCCTCAGCCAAGTaGACAGGTCAGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAAASSAK*TGQPGG
Trigger: CCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGC...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTGATTCCTTCCAAGGCTaGCGCGCTCTCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAADSFQG*RALCGW
Trigger: CCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATC...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCGCTCTGGGGGTGCCATaGTACAGCCGCAACCTTTTG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSALGVP*YSRNLL
Trigger: CAAAAGGTTGCGGCTGTACCATGGCACCCCCAGAGC...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGGCTCTGGGGGTGCCATaGTACAGCCGCAACCTTTTG +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLALGVP*YSRNLL
Trigger: CAAAAGGTTGCGGCTGTACCATGGCACCCCCAGAGC...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGTTCTCAGGAAGAAGGTaGAACGCAGGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWFSGRR*NAGSRA
Trigger: GGCCCTGGAGCCTGCGTTCCACCTTCTTCCTGAGAA...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAGGCACCACCGTCCAGTaGGCCACATCCCGGATTCTC +
Preference number: 4 (lower is better)
Translates to: APQSGRARRWACHHSLGTGTTVQ*ATSRIL
Trigger: GAGAATCCGGGATGTGGCCCACTGGACGGTGGTGCC...TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGGGCGCAGGTAGAGCTGGGGCTTGGCTCCCGGAGCTaGTCTTGGAAGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: LELEGDVGGLVGAQVELGLGSRS*SWKRRP
Trigger: TGGTCTCCTCTTCCAAGACCAGCTCCGGGAGCCAAG...CCCCAGCTCTACCTGCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGACCGCAAATGCAGGGTaGCCGACCATCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CPAGHGSVAWQPAHCPRPTANAG*PTISGR
Trigger: CCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGT...CGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGTGCGAGGGGTTGGGCTaGATCCCACCCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SCPAEKLWNLKGTWAVSWCEGLG*IPPCRG
Trigger: GCCTCTGCAGGGTGGGATCCAGCCCAACCCCTCGCA...CCACGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAACGTGGGTGGTTTCCTaGAAGGCCGCCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAATWVVS*KAAAPL
Trigger: AAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGT...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGCCCTGCAGAGCTCCTaGTCTGGGTTCCCACAACAA +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWALQSS*SGFPQQ
Trigger: TTGTTGTGGGAACCCAGACCAGGAGCTCTGCAGGGC...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGACCAGCTGCAGTCGTaGCGTCGTTGCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWADQLQS*RRCGWE
Trigger: TTCCCACCCGCAACGACGCCACGACTGCAGCTGGTC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCAACAGGCACGAGGATGTaGGTCAGGGCGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPTGTRM*VRAPEL
Trigger: CAGCTCTGGCGCCCTGACCCACATCCTCGTGCCTGT...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCACAGGCACGAGGATGTaGGTCAGGGCGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLTGTRM*VRAPEL
Trigger: CAGCTCTGGCGCCCTGACCCACATCCTCGTGCCTGT...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGCAGCGCCGCTCACCTaGCTTCAGGAACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHAAPLT*LQEPRA
Trigger: GGCCCTGGGTTCCTGAAGCCAGGTGAGCGGCGCTGC...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGACAGCCGGCCGGCCTTaGCGGAGGAGATGCTTCATC +
Preference number: 4 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSTAGRP*RRRCFI
Trigger: GATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGT...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTGCATCCACCTTTGAGCACCAACGCCTTGCTGGCAGGGAGGCTGAGTGGCAGCACGACCTCAAGCTCGTaGGAGGCCTGCACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: LHPPLSTNALLAGRLSGSTTSSS*EACTAG
Trigger: GCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGT...GCTGCCACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGPFTTE*TPMGLT
Trigger: CGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGACGGGTGACCCACGTTaGCCAAAGTCAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CPAGHGSVAWQPAHCPRPTGDPR*PKSGAA
Trigger: GGCTGCACCTGACTTTGGCCAACGTGGGTCACCCGT...CGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCACCAGGCTCAGCAGGCTaGCGATGCTCTCGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAPGSAG*RCSRPS
Trigger: CGAAGGCCGAGAGCATCGCCAGCCTGCTGAGCCTGG...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCGGCAGAGCACGGCGATaGGCTTGCCACCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVGRARR*ACHHSL
Trigger: GAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCC...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLAANMD*GVLTKH
Trigger: ATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGC...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCCCTGCCACGTCTGTGTaGGTGTCGCCAGCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: TEWTPMGLTRPNPSMSPLPATSV*VSPASD
Trigger: ATCGCTGGCTGGCGACACCCACACAGACGTGGCAGG...GAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTTGGAGATGAGCGGCTaGCGGCAGCAGAGGCACACG +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGLEMSG*RQQRHT
Trigger: CGTGTGCCTCTGCTGCCGCCAGCCGCTCATCTCCAA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCATGGTCGCTGTGCAGGTaGAATGTCCTCCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAWSLCR*NVLREG
Trigger: CCCCTCCCGGAGGACATTCCACCTGCACAGCGACCA...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGCGCAGCAGCTCCGGGTaGTCGCTGTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVRSSSG*SLCRWN
Trigger: ATTCCACCTGCACAGCGACCACCCGGAGCTGCTGCG...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCGGGCCACATCCCTCCTaGAAGTGGTCCTGGACGTGG +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGGPHPS*KWSWTW
Trigger: CCACGTCCAGGACCACTTCCAGGAGGGATGTGGCCC...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGGGAACCCAGGCCTGCTaGGTGTCAGCAGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRGTQAC*VSAAAK
Trigger: CTTAGCTGCTGCTGACACCCAGCAGGCCTGGGTTCC...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCAGGGGGATTGGAGCTaGCCTTTCACACTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQQGDWS*PFTLGA
Trigger: GGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTG...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 72 bp GAGCCTAGGGAGGGACCGAGGCGTCTGCATCCACCTTaGAGCACCAACGCCTTGCTGGCAGGGAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: EPREGPRRLHPP*STNALLAGRLS
Trigger: ACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGACGCCTCGGTCCCTCCCTAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTTTCATCCTGCCCGCCTaGGGGTCCCGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIFILPA*GSRGLP
Trigger: GGGAAGCCCACGGGACCCTCAGGCGGGCAGGATGAA...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCATGGCATTCAACCTCTaGCAGTACCTCCAGCACGCC +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSMAFNL*QYLQHA
Trigger: GGCGTGCTGGAGGTACTGTCAGAGGTTGAATGCCAT...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAATCCCGGATTCTCCATaGGCTGGAAGCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GQLACDAGDIHALQGVEVIPDSP*AGSRPG
Trigger: ACCTGGCCTGCTTCCAGCTCATGGAGAATCCGGGAT...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGCTCCTGCAGGGCTGCTaGACACGTACTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVLLQGC*TRTPAG
Trigger: TCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAG...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGGGTTGGACAGAGAGGTaGCCGAAGCTGCATTGCCGT +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQGWTER*PKLHCR
Trigger: ACGGCAATGCAGCTTCGGTCACCTCTCTGTCCAACC...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGAGCTCATGCTGGCTaGGGGTACCTTGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSRAHAG*GYLVDQ
Trigger: CTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCT...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCCCACTTTGGGGCCACTaGCAGGCTCCGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVPLWGH*QAPWVH
Trigger: ATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGG...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGGGACGCCGATGGGCTTaGCGCGGCCAAACCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLGRRWA*RGQTPA
Trigger: TGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCC...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCATTGCATCCGACTCGCGGCTaGCGTCCTGGGGCCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RTMCMHARLDREVTEAALHPTRG*RPGAPC
Trigger: GCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATG...CAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGCCCGGTAGGCGGCGATaGCCTGTAGGTCCCGCAAGT +
Preference number: 4 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQPGRRR*PVGPAS
Trigger: ACTTGCGGGACCTACAGGTCATCGCCGCCTACCGGG...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCAGCTGGACTTCCAAGGTaGCACGGCGTCCATGCCCTT +
Preference number: 4 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPAGLPR*HGVHAL
Trigger: AAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGC...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTTCATCTGGACGGCAGCAGACGCCCGCAGCCAACATaGTCTCAAAGGCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LHSRPALAEEMLHLDGSRRPQPT*SQRPWR
Trigger: TCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCG...TCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp ACAGACAGGCCCCAGCTGGGTGCCGCAGGAAGGACGTCACCCTCAAGCCCTCACCGCCCGCAGCCAACATaGTCTCAAAGGCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TDRPQLGAAGRTSPSSPHRPQPT*SQRPWR
Trigger: TCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCG...GTGAGGGCTTGAGGGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCAGGAAGGAGTCCTCTCTaGACCGCAGCAGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPGRSPL*TAAAPG
Trigger: ACCCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCC...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCCCTCGGGAGGTTCAGTaGGCTTGTCACTGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVPREVQ*ACHWPY
Trigger: GTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGG...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCTCGCCCCATCAGACTaGACTGAGCCTAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLLAPSD*TEPREG
Trigger: TCCCTCCCTAGGCTCAGTTCAGTCTGATGGGGCGAG...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCAGGCCAGGTATCTGCTaGAGACCAGACACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSRPGIC*RPDTRR
Trigger: CCTTCTGGTGTCTGGTCTGCAGCAGATACCTGGCCT...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGCCCAGCGGACCATGTaGATGCATGCCAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAAQRTM*MHARLD
Trigger: GTCCAACCTGGCATGCATGCACATGGTCCGCTGGGC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCGCCCAGCGGACCATGTaGATGCATGCCAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLAQRTM*MHARLD
Trigger: GTCCAACCTGGCATGCATGCACATGGTCCGCTGGGC...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTACCCGACTCCACCTaGTTCACCTCTTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWVPDST*FTSSEL
Trigger: GAGCTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTAC...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCTCCCAGACGTCAATCTaGAGGGTCTGCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TEWTPMGLTRPNPSMSPLSQTSI*RVCTAR
Trigger: CCTGGCCGTGCAGACCCTGCAGATTGACGTCTGGGA...GAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR GCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTTGGCCAAAGTCAGGTaGAGCCGGCCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGLAKVR*SRPFTT
Trigger: GGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTGTAGGTCCCGCAAGTaGTGTGTGCGGACGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGCRSRK*CVRTLC
Trigger: GCAGAGCGTCCGCACACAGCACTTGCGGGACCTACA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACATGCACCATGGCCAGCTaGCCTGCAGAGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: APQSGRARRWACHHSLGTCTMAS*PAEKLW
Trigger: CCAGAGCTTCTCTGCAGGGCAGCTGGCCATGGTGCA...TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACACGGAACCCAGGCCTaGTGGGTGTCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPHGTQA*WVSAAA
Trigger: AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTG...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGAACAGCACAGTCGCCTaGAGAGCCCAGCGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVNSTVA*RAQRLE
Trigger: CTCAAGGCGCTGGGCTCTGCAGGCGACTGTGCTGTT...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCGATTCCTTCCAAGGCTaGCGCGCTCTCTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLDSFQG*RALCGW
Trigger: CCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATC...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGCTTACGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGTCGTCGGCTTCACTGTaGTTTTCCACGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLRLRVASDSRLTSWGPLSSASL*FSTSSQ
Trigger: TTGGGAGGACGTGGAAAACCACAGTGAAGCCGACGA...CAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCGTAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCATTCTCAGGAAGAAGGTaGAACGCAGGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPFSGRR*NAGSRA
Trigger: GGCCCTGGAGCCTGCGTTCCACCTTCTTCCTGAGAA...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGTCCCGGAGCTGGTCTTaGAAGAGGAGACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWSRSWS*KRRPLS
Trigger: GGAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGA...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGACCGCAAATGCAGGGTaGCCGACCATCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALTANAG*PTISGR
Trigger: CCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGT...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGRSASR*EIPASN
Trigger: GTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGAGGACCAGGGAGGTCTaGCTCAGGTCGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PMSSRESPSQTSICRVCTRTREV*LRSASR
Trigger: CCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT...CGTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGCTGACAGCCTCGGCTaGCTGTTTATTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQADSLG*LFIGIQ
Trigger: CTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCATTGGCGCCAGAGCTGGGCTaGCCGGCCTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RTMCMHARLDREVTEAALAPELG*PASSSW
Trigger: CCAGCTGGATGAGGCCGGCCAGCCCAGCTCTGGCGC...CAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCACAGCCGGCCGGCCTTaGCGGAGGAGATGCTTCATC +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVTAGRP*RRRCFI
Trigger: GATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGT...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTCACGACCTCAAGCTCGTaGGAGGCCTGCACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SGGSVSLSLALQGPMSVLTTSSS*EACTAG
Trigger: GCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGT...GAGGACCGACATGGGACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCCATGGGTCAGTAGCATaGCAGCCAGCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSHGSVA*QPAHCP
Trigger: TGGACAGTGAGCTGGCTGCCATGCTACTGACCCATG...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCACCCCCAGCGTGGCGTaGAGCGTGTGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: QTAQRTMCMHARLDREVTTPSVA*SVCSVV
Trigger: CACCACGGAGCACACGCTCCACGCCACGCTGGGGGT...GGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCACGGCGACCCCCAGCGTaGCGTGGAGCGTGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPRRPPA*RGACAP
Trigger: CGGAGCACACGCTCCACGCCACGCTGGGGGTCGCCG...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGAGGCTGCCACGCAGGTaGAACATGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVRLPRR*NMSSST
Trigger: GGTGGAGGAGGACATGTTCCACCTGCGTGGCAGCCT...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGAACTTGAAGGGGACGTaGGCGGTCTCGTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWNLKGT*AVSWGR
Trigger: GCGCCCCCACGAGACCGCCCACGTCCCCTTCAAGTT...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCACCTGGTCCACCACGTaGGGCTGCAGCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVTWSTT*GCSSTV
Trigger: GACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGT...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTTTGGAGATGAGCGGCTaGCGGCAGCAGAGGCACACG +
Preference number: 4 (lower is better)
Translates to: QSGRARRWACHHSLGTRPLEMSG*RQQRHT
Trigger: CGTGTGCCTCTGCTGCCGCCAGCCGCTCATCTCCAA...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCATGGTCGCTGTGCAGGTaGAATGTCCTCCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAWSLCR*NVLREG
Trigger: CCCCTCCCGGAGGACATTCCACCTGCACAGCGACCA...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACCCCGTGATGGGCTTCTaGAGGCGAGGCTTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHPVMGF*RRGFRR
Trigger: TCTCCGAAAGCCTCGCCTCCAGAAGCCCATCACGGG...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTCCTGGAAGTGGTCCTaGACGTGGAGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGSWKWS*TWSSSS
Trigger: GCTGCTGGAGCTCCACGTCCAGGACCACTTCCAGGA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCGGGGAGGCCGCCAGCTaGGAAATTGACAACCCTGGT +
Preference number: 4 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRGEAAS*EIDNPG
Trigger: ACCAGGGTTGTCAATTTCCCAGCTGGCGGCCTCCCC...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp CCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGCCTGCTGAAGCTAGCTaGGCGCGTCAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: PMSSRESPSQTSICRVCTPAEAS*ARQGHI
Trigger: GATGTGGCCTTGACGCGCTCAGCTAGCTTCAGCAGG...CGTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGGGTTGGACAGAGAGGTaGCCGAAGCTGCATTGCCGT +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALGWTER*PKLHCR
Trigger: ACGGCAATGCAGCTTCGGTCACCTCTCTGTCCAACC...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTGGCTCCATCGTTTaGGATGACCCGAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAAAGSIV*DDPRSG
Trigger: TCCAGATCTCGGGTCATCTCAAACGATGGAGCCAGC...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGCCTGGGGATGAGAGGTaGAAGCTCTCACTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWPGDER*KLSLSS
Trigger: TGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGG...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGGAAGGAGTCCTCTCTaGACCGCAGCAGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHGRSPL*TAAAPG
Trigger: ACCCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCC...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGGCAGGTACTACAAAATaGCCAGCGCTCGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQAGTTK*PALGLC
Trigger: GCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGC...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCGTCCTGGACGTGGAGTaGAGTCCAGGGCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVVLDVE*SPGLCS
Trigger: TGAGCAAAGCCCTGGACTTCACTCCACGTCCAGGAC...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGGAGTGGCAGCCCTGCTaGGTTTACAACACGCTCGTC +
Preference number: 4 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSEWQPC*VYNTLV
Trigger: GACGAGCGTGTTGTAAACTCAGCAGGGCTGCCACTC...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCAGGCCCGGCGGCCGGTaGTCAACGGAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: ILLLTPFPSPAANMISKARPGGR*STEPQA
Trigger: GGCTTGTGGCTCCGTTGAGCACCGGCCGCCGGGCCT...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTATGGGTGAAGATCCTGTaGCAGTCGTTCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GQLACDAGDIHALQGVEVWVKIL*QSFILP
Trigger: GGGCAGGATGAACGACTGGCACAGGATCTTCACCCA...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGAGGACACACTGGAATaGCGTGGATTCCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWEDTLE*RGFLPR
Trigger: CCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTC...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGTCCCATCCCGTTTCTTaGCCTCAGCGACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALSHPVS*PQRPLP
Trigger: TGGAAGTGGTCGCTGAGGGCAAGAAACGGGATGGGA...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCGTGTCTGTTTTGCTCTaGGGGGTCCTGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLVSVLL*GVLEKR
Trigger: CCGCTTCTCCAGGACCCCGCAGAGCAAAACAGACAC...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGGGCTTCAGCGTGTACTaGAGGCTGCAGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLGFSVY*RLQFSM
Trigger: CATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCC...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGAGCAGGCCAGGTATCTaGTGCAGACCAGACACCAGA +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRSRPGI*CRPDTR
Trigger: TCTGGTGTCTGGTCTGCAGCAGATACCTGGCCTGCT...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp TGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTAAGCCCAGACCATTGTaGACGCCCACACGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WVSSMAASSLSTSASFCAKPRPL*TPTRRR
Trigger: GCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTT...AGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTAGCGGACCATGTGCATaGATGCCAGGTTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAASGPCA*MPGWTE
Trigger: CTCTGTCCAACCTGGCATGCATGCACATGGTCCGCT...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCCCTCTTCAGAGCTCATaGTGGCTGAGGGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAPLQSS*WLRVPC
Trigger: ACAAGGTACCCTCAGCCAGCATGAGCTCTGAAGAGG...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGCAAAGGTGCCATCTCTaGTCACAGGCACGAGGATGT +
Preference number: 4 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWQRCHL*SQARGC
Trigger: ACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTG...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLLLVFS*HDLKLV
Trigger: CACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAG...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGCGTCCTGGGGCCCCTTaGCCTGCCGGGCATGGGTCA +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSRPGAP*PAGHGS
Trigger: TGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACG...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCCGTCCTGGGGCCCCTTaGCCTGCCGGGCATGGGTCA +
Preference number: 4 (lower is better)
Translates to: ILLLTPFPSPAANMISKARPGAP*PAGHGS
Trigger: TGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACG...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CATCCTCAGAGCTTTTCAGGAGTGGAACCTCTGACAGGCTGTGCCCGTGTCTTCCGTCCTGGGGCCCCTTaGCCTGCCGGGCATGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPQSFSGVEPLTGCARVFRPGAP*PAGHGS
Trigger: TGACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACG...GAAGACACGGGCACAGCCTGTCAGAGGTTCCACTCCTGAAAAGCTCTGAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTTCCTCCACCGGTGTGTaGAGGCCAGCAGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFSSTGV*RPAAPL
Trigger: CAAGGGTGCTGCTGGCCTGCACACACCGGTGGAGGA...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGCCATGCCCTTCTCGTTaGTCAACCCAGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALPCPSR*STQERP
Trigger: AGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGG...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTGACCCTTCCCTCTACAAAGTCATGGTaGTGGGCCGAGAAGAAATGC +
Preference number: 4 (lower is better)
Translates to: VGGLHSRPALAEEMLTLPSTKSW*WAEKKC
Trigger: GCATTTCTTCTCGGCCCAGCACCATGACTTTGTAGA...GGGAAGGGTCAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGCTCTGGCTGTTCCTTTaGAGGGGGATTGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVLWLFL*RGIGAG
Trigger: GCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAG...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACACTGAGGACCGAGGACTaGCCGAGGGGCGCGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTLRTED*PRGAPR
Trigger: ACGGGGCGCGCCCCTCGGCCAGTCCTCGGTCCTCAG...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGCGCGCTCTCTGTGGGTaGGGAGGGACAAGCACGTTT +
Preference number: 4 (lower is better)
Translates to: PMSSRESPSQTSICRVCTRALCG*GGTSTF
Trigger: AAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCG...CGTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGTCGTCGGCTTCACTGTaGTTTTCCACGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQSSASL*FSTSSQ
Trigger: TTGGGAGGACGTGGAAAACCACAGTGAAGCCGACGA...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTCTCCAGGGCCGGGTGTaGCTTCAGCGTGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFLQGRV*LQRVLQ
Trigger: CTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAG...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTTCTCAGGAAGAAGGTaGAACGCAGGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGFSGRR*NAGSRA
Trigger: GGCCCTGGAGCCTGCGTTCCACCTTCTTCCTGAGAA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGTCCCGGAGCTGGTCTTaGAAGAGGAGACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQSRSWS*KRRPLS
Trigger: GGAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGA...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCTTGGCTCCCGGAGCTaGTCTTGGAAGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRLGSRS*SWKRRP
Trigger: TGGTCTCCTCTTCCAAGACCAGCTCCGGGAGCCAAG...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGGACAGTGCGAGGGGTTaGGCTGGATCCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQDSARG*AGSHPA
Trigger: TGCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTC...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTGCATCCACCTTTGAGCACCAACGCCTTGCTGGCAGGGAGGCTGAGTGGCAGCGAGCCCAGCGAGAACTaGAACCGGAGTGTACCCGAC +
Preference number: 4 (lower is better)
Translates to: LHPPLSTNALLAGRLSGSEPSEN*NRSVPD
Trigger: GTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTC...GCTGCCACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACGTAACTGTTCGGCAATaGATGTTTCCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHVTVRQ*MFPGPG
Trigger: CCCTGGTCCTGGAAACATCCATTGCCGAACAGTTAC...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAATCTGCAGGGTCTGCACGGCCAGGTAGCGGGCAAAGCAGCGCCGCTCACCTGGCTGACAGCCTCGGCTaGCTGTTTATTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: QSAGSARPGSGQSSAAHLADSLG*LFIGIQ
Trigger: CTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGC...CAGGTGAGCGGCGCTGCTTTGCCCGCTACCTGGCCGTGCAGACCCTGCAGATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGTTCCTCGGCAGTCCTaGGCCACTCTGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAVPRQS*ATLLKA
Trigger: TGCCTTTAGCAGAGTGGCCCAGGACTGCCGAGGAAC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCATGGCGTCGTTGCGGGTaGGAAGCGGTAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAWRRCG*EAVELE
Trigger: TTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCA...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACTGGCGTCGTTGCGGGTaGGAAGCGGTAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHWRRCG*EAVELE
Trigger: TTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCA...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCTCGGCTGGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCCGGAGGACTGCATCAGGGCGCCAGAGCTaGGCTGGCCGGCCTCATCCA +
Preference number: 4 (lower is better)
Translates to: PRLAVYWHPESRESRRTASGRQS*AGRPHP
Trigger: TGGATGAGGCCGGCCAGCCCAGCTCTGGCGCCCTGA...TGCAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp TGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCAGGACAGGCACGAGGATGTaGGTCAGGGCGCCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CPTHHSPGRGVKSRALLRTGTRM*VRAPEL
Trigger: CAGCTCTGGCGCCCTGACCCACATCCTCGTGCCTGT...CCTGAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp TGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCAGGCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: CPTHHSPGRGVKSRALLRPFTTE*TPMGLT
Trigger: CGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG...CCTGAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp GTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGGGCATGGGTCAGTAGCATaGCAGCCAGCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VGQSQVQPALHHRVDADGHGSVA*QPAHCP
Trigger: TGGACAGTGAGCTGGCTGCCATGCTACTGACCCATG...CCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTACCTGGTCCACCACGTaGGGCTGCAGCTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFTWSTT*GCSSTV
Trigger: GACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGT...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAAANMD*GVLTKH
Trigger: ATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACCGGGGCCCACATTCTaGGTCTCACAGATGACGTTC +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAPGPTF*VSQMTF
Trigger: GAACGTCATCTGTGAGACCCAGAATGTGGGCCCCGG...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGTTTGATCTCCGGGCTTaGACCACTGGCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQFDLRA*TTGHLQ
Trigger: CTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAA...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTACCTGCCACGTCTGTGTaGGTGTCGCCAGCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALPATSV*VSPASD
Trigger: ATCGCTGGCTGGCGACACCCACACAGACGTGGCAGG...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGGCACGAAGACACCTTTaGGGTCTGTCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLARRHL*GLSSAP
Trigger: AGGAGCTGAAGACAGACCCCAAAGGTGTCTTCGTGC...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGGAGGCCACCAGCTGGTaGCAATCCACGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWEATSW*QSTSTR
Trigger: CCTGGTGGACGTGGATTGCCACCAGCTGGTGGCCTC...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCTCCACCCCCGACCTaGAAGGAGTCCTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVSPPPT*KESSLN
Trigger: GTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGA...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp AGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGCATCCCTCCTGGAAGTaGTCCTGGACGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCPAEKLWNLKGTWAVSWHPSWK*SWTWSS
Trigger: GGAGCTCCACGTCCAGGACCACTTCCAGGAGGGATG...CCACGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGGGCACCACCGTCCAGTaGGCCACATCCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQGTTVQ*ATSLLE
Trigger: TTCCAGGAGGGATGTGGCCCACTGGACGGTGGTGCC...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTGGTCGCCGCAGACCCTaGTCGCTTTGCCACACTCGT +
Preference number: 4 (lower is better)
Translates to: RSRGPSGGSVSLSLALQGGRRRP*SLCHTR
Trigger: ACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACC...ACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CACCTGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCTCAGTCGAAGCCCCTaGAACGTCCCAGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: HLSHPPQSWTWSEVQGFALSRSP*NVPGGT
Trigger: GGTCCCACCTGGGACGTTCCAGGGGCTTCGACTGAG...AGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CAA 72 bp CTCTGGGAGGCGGAGGCGGCTTCTCAAAACCAGAGCTaGGCTCCCGGAGCTGGTCTTGGAAGAGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: LWEAEAASQNQS*APGAGLGRGDH
Trigger: GTGGTCTCCTCTTCCAAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAGAAGCCGCCTCCGCCTCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 72 bp GACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCCTGCACCATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DFQGDTASMPFS*LNPGEACTMAS
Trigger: GCTGGCCATGGTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 72 bp TGCAGCTCCACAGTCAGGCAGAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAACAAGACCTTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: CSSTVRQSTAMG*PPLARNKTLAC
Trigger: ACACGCCAAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
3UTR CAA 72 bp CACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTaGCTCAGGCCCTCTAACGAGCAATCCCGGGGCACC +
Preference number: 4 (lower is better)
Translates to: HHSPGRGVKSRA*LRPSNEQSRGT
Trigger: GGTGCCCCGGGATTGCTCGTTAGAGGGCCTGAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGAGTCCGGCTGGTTGCTaGAGATCCGAAGAATTCCAA +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLSPAGC*RSEEFQ
Trigger: TTGGAATTCTTCGGATCTTCAGCAACCAGCCGGACT...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGATCCAGGTGTTCTTCTaGGCCCAGCGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: CPAGHGSVAWQPAHCPRPIQVFF*AQRELE
Trigger: TTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGAT...CGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTGGGCATGCAAAGGCGTaGACGGCAGCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSGHAKA*TAAPVT
Trigger: AGTTACAGGAGCTGCCGTTCACGCCTTTGCATGCCC...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp AACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGTTGAGCTTCCAGTCGTaGGGAGGCTGCCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NSRRGRGWFPGRPPLHFGLSFQS*GGCLQR
Trigger: TCTCTGGAGGCAGCCTCCTCACGACTGGAAGCTCAA...CCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp AGACCCAGCATCAAAGGTGCCATCTCTGCTCACAGGCACGAGGATGTGGGTCAGCCCGGTAGGCGGCGATaGCCTGTAGGTCCCGCAAGT +
Preference number: 4 (lower is better)
Translates to: RPSIKGAISAHRHEDVGQPGRRR*PVGPAS
Trigger: ACTTGCGGGACCTACAGGTCATCGCCGCCTACCGGG...CTGACCCACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGTCTGGGTCTCACAGATaGCGTTCGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWSGSHR*RSGRCS
Trigger: GCTGCAGCGACCCGAACGTCATCTGTGAGACCCAGA...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTCTGGGTCTCACAGATaGCGTTCGGGTCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WVSSMAASSLSTSASFCASGSHR*RSGRCS
Trigger: GCTGCAGCGACCCGAACGTCATCTGTGAGACCCAGA...AGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CCAACGGGAACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCTTCAGCTCCTGGGGATaGGAGGTGAAAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: PTGTLEGDVGGFLEGRRSFSSWG*EVKALT
Trigger: AGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAA...GGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTTCCCGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTGCCCTCACTGGTAGATaGCCTTCACGCAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAAALTGR*PSRKMP
Trigger: AGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGC...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGCAGGTACTACAAAATaGCCAGCGCTCGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAAGTTK*PALGLC
Trigger: GCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCGGTCGCCGCAGACCCTGGTCGCTTTGCCACACTCGTCTACACTGCATACGATTGGCGGAGGAGATGCTaGCCCTTCCCTTGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PVAADPGRFATLVYTAYDWRRRC*PFPCGS
Trigger: AGACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCA...ATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTGCGGCGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGAGGCCCGGCGGCCGGTaGTCAACGGAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQRPGGR*STEPQA
Trigger: GGCTTGTGGCTCCGTTGAGCACCGGCCGCCGGGCCT...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAACGGGAACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCGAGGACACACTGGAATaGCGTGGATTCCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PTGTLEGDVGGFLEGRRSEDTLE*RGFLPR
Trigger: CCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTC...GGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTTCCCGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCATCCCATCCCGTTTCTTaGCCTCAGCGACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWASHPVS*PQRPLP
Trigger: TGGAAGTGGTCGCTGAGGGCAAGAAACGGGATGGGA...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCTCCCATCCCGTTTCTTaGCCTCAGCGACCACTTCCA +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLSHPVS*PQRPLP
Trigger: TGGAAGTGGTCGCTGAGGGCAAGAAACGGGATGGGA...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp TGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTTCGCCTTGAGCTTCTCCTGGAGAAGCGGGTaGAGGAGGGCTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CPRPPASVLAPRVFALSFSWRSG*RRALGV
Trigger: CACCCCCAGAGCCCTCCTGCACCCGCTTCTCCAGGA...GAAGCTCAAGGCGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGTGTCTGTTTTGCTCTaGGGGGTCCTGGAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQVSVLL*GVLEKR
Trigger: CCGCTTCTCCAGGACCCCGCAGAGCAAAACAGACAC...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGGCTTCAGCGTGTACTaGAGGCTGCAGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAAGFSVY*RLQFSM
Trigger: CATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCC...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTACCAGTACAACGACCTaGGGCCTCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVTSTTT*GLCTKP
Trigger: GGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGT...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGAAGATGACCGCAAATaGAGGGTGGCCGACCATCTC +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAEDDRK*RVADHL
Trigger: GAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTC...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCGAAGATGACCGCAAATaGAGGGTGGCCGACCATCTC +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLEDDRK*RVADHL
Trigger: GAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTC...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCATTGCCGTCCACTCCTaGAGGGCTGCTGAACACGTA +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGIAVHS*RAAEHV
Trigger: TACGTGTTCAGCAGCCCTGCAGGAGTGGACGGCAAT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGACCATGTGCATGCATaGCAGGTTGGACAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAADHVHA*QVGQRG
Trigger: ACCTCTCTGTCCAACCTGGCATGCATGCACATGGTC...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAACGGGAACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCGACCATGTGCATGCATaGCAGGTTGGACAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PTGTLEGDVGGFLEGRRSDHVHA*QVGQRG
Trigger: ACCTCTCTGTCCAACCTGGCATGCATGCACATGGTC...GGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTTCCCGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCAGCGGACCATGTGCATaGATGCCAGGTTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRSGPCA*MPGWTE
Trigger: CTCTGTCCAACCTGGCATGCATGCACATGGTCCGCT...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCACCTCTTCAGAGCTCATaGTGGCTGAGGGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: HHHGVRAHGTQACWVSAAPLQSS*WLRVPC
Trigger: ACAAGGTACCCTCAGCCAGCATGAGCTCTGAAGAGG...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTCAGTCGTGGCGTCGTTaGGGGTGGGAAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVQSWRR*GWEAVE
Trigger: TTCTACCGCTTCCCACCCGCAACGACGCCACGACTG...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GCCTTGTGTCCCTTGACACCCCATCAGCAGCCCCTATCCCAGCATAGGCCTCAGCAGTCGTGGCGTCGTTaGGGGTGGGAAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ALCPLTPHQQPLSQHRPQQSWRR*GWEAVE
Trigger: TTCTACCGCTTCCCACCCGCAACGACGCCACGACTG...CTGAGGCCTATGCTGGGATAGGGGCTGCTGATGGGGTGTCAAGGGACACAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp GCCTTGTGTCCCTTGACACCCCATCAGCAGCCCCTATCCCAGCATAGGCCTCAGTCCCAGACGTCAATCTaGAGGGTCTGCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALCPLTPHQQPLSQHRPQSQTSI*RVCTAR
Trigger: CCTGGCCGTGCAGACCCTGCAGATTGACGTCTGGGA...CTGAGGCCTATGCTGGGATAGGGGCTGCTGATGGGGTGTCAAGGGACACAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp TCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCAGCTCGTGGGAGGCCTaGACAGCCGGCCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: STHHHVVLLVFSCHDLKLSSWEA*TAGRPW
Trigger: CCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCT...GAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR GCA 90 bp CCAGCCTTGTGTCCCTTGACACCCCATCAGCAGCCCCTATCCCAGCATAGGCCTTTGGCCAAAGTCAGGTaGAGCCGGCCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: PALCPLTPHQQPLSQHRPLAKVR*SRPFTT
Trigger: GGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAA...AGGCCTATGCTGGGATAGGGGCTGCTGATGGGGTGTCAAGGGACACAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACCATGGCCAGCTGCCCTaGAGAGAAGCTCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHHGQLP*REALEL
Trigger: AAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGCCATG...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTATGCACCATGGCCAGCTaGCCTGCAGAGAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALCTMAS*PAEKLW
Trigger: CCAGAGCTTCTCTGCAGGGCAGCTGGCCATGGTGCA...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGTGACACGGCGTCCATaGCCTTCTCGTTGCTCAACC +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAVTRRP*PSRCST
Trigger: GGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCAC...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGCACGGCGATGGGCTTaGCACCACTCGCTCGGAACA +
Preference number: 4 (lower is better)
Translates to: QTAQRTMCMHARLDREVTARRWA*HHSLGT
Trigger: TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGC...GGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGTCCACCACGTGGGGCTaGAGCTCCACAGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLSTTWG*SSTVRQ
Trigger: CTGCCTGACTGTGGAGCTGCAGCCCCACGTGGTGGA...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGTCCGGGTGGTCGCTGTaGAGGTGGAATGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLSGWSL*RWNVLR
Trigger: CCGGAGGACATTCCACCTGCACAGCGACCACCCGGA...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAAACGAGGGTCCCACATaGGTAGATGGCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWANEGPT*VDGSTR
Trigger: TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTT...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCCCATGTCGGTCCTCTaGCCTGAGGTGCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: HHVVLLVFSCHDLKLVGGPMSVL*PEVRTG
Trigger: GCCTGTGCGCACCTCAGGGCAGAGGACCGACATGGG...GCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp TGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTCGCGCTCTCTGTGGGTaGGGAGGGACAAGCACGTTT +
Preference number: 4 (lower is better)
Translates to: WVSSMAASSLSTSASFCARALCG*GGTSTF
Trigger: AAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCG...AGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp ACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGCACACTGGAATGCCGTaGATTCCTTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TLAKVRCSRPFTTEWTPMHTGMP*IPSKAG
Trigger: GCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTG...CATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCCACACTGGAATGCCGTaGATTCCTTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGHTGMP*IPSKAG
Trigger: GCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTG...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCCACTTGAGGACACACTaGAATGCCGTGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSHLRTH*NAVDSF
Trigger: GAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTG...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCCTCAAAACCAGAGCTTaGCTCCCGGAGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGLKTRA*LPELVL
Trigger: CAAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAG...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTTCAGAGCTCATGCTaGCTGAGGGTACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLLQSSC*LRVPCR
Trigger: TCTACAAGGTACCCTCAGCCAGCATGAGCTCTGAAG...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACCTCTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHLSKGT*VVSWKA
Trigger: GGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAG...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGTAACTGTTCGGCAATaGATGTTTCCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSVTVRQ*MFPGPG
Trigger: CCCTGGTCCTGGAAACATCCATTGCCGAACAGTTAC...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGCCCTGCAGAGCTCCTaGTCTGGGTTCCCACAACAA +
Preference number: 4 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQALQSS*SGFPQQ
Trigger: TTGTTGTGGGAACCCAGACCAGGAGCTCTGCAGGGC...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGGCCCTGCAGAGCTCCTaGTCTGGGTTCCCACAACAA +
Preference number: 4 (lower is better)
Translates to: SCPAEKLWNLKGTWAVSWALQSS*SGFPQQ
Trigger: TTGTTGTGGGAACCCAGACCAGGAGCTCTGCAGGGC...CCACGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGCGCCAGAGCTGGGCTaGCCGGCCTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQAPELG*PASSSW
Trigger: CCAGCTGGATGAGGCCGGCCAGCCCAGCTCTGGCGC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACCATGTACCTCAGCTaGAAGCCAGGAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGTMYLS*KPGDPA
Trigger: TGCTGGGTCTCCTGGCTTCCAGCTGAGGTACATGGT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GTCTCTCCCACGTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACCATGTACCTCAGCTaGAAGCCAGGAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: VSPTLAKVRCSRPFTTEWTMYLS*KPGDPA
Trigger: TGCTGGGTCTCCTGGCTTCCAGCTGAGGTACATGGT...CCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAACGTGGGAGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAACCATGTACCTCAGCTaGAAGCCAGGAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWATMYLS*KPGDPA
Trigger: TGCTGGGTCTCCTGGCTTCCAGCTGAGGTACATGGT...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCCATGGGTCAGTAGCATaGCAGCCAGCTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGHGSVA*QPAHCP
Trigger: TGGACAGTGAGCTGGCTGCCATGCTACTGACCCATG...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GATGTAGATCAGGATCTCCTCCTCACCCACTCTCTGACTAGGCGCAAACTGCAATCGCGGCTGACGTCCTaGGGCCCCTTGCCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: DVDQDLLLTHSLTRRKLQSRLTS*GPLPCR
Trigger: CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGA...TTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGAGGAGATCCTGATCTACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACGTGTGCTGTGTGTTGTaGGGGTTCTTAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHVCCVL*GFLSTN
Trigger: GTTTGTGCTTAAGAACCCCCACAACACACAGCACAC...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTGAGAGGCCTGCACCATaGCCAGCTGCCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIERPAP*PAALQR
Trigger: TCTCTGCAGGGCAGCTGGCCATGGTGCAGGCCTCTC...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACAGAAATATGTCCCGTaGTTCCCCGGGGCCCACATT +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAQKYVP*FPGAHI
Trigger: AATGTGGGCCCCGGGGAACCACGGGACATATTTCTG...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGCACGAAGACACCTTTaGGGTCTGTCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQLACDAGDIHALQGVEVARRHL*GLSSAP
Trigger: AGGAGCTGAAGACAGACCCCAAAGGTGTCTTCGTGC...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCGCAGCAGCTCCGGGTaGTCGCTGTGCAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIRSSSG*SLCRWN
Trigger: ATTCCACCTGCACAGCGACCACCCGGAGCTGCTGCG...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTTCTCCACCCCCGACCTaGAAGGAGTCCTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSSPPPT*KESSLN
Trigger: GTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGA...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCCTGGCCTTTCACACTTaGGGCCTCCATCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYALAFHT*GLHQNF
Trigger: GAAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAG...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAATCCAGGTGTTCTTCTaGGCCCAGCGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWAIQVFF*AQRELE
Trigger: TTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGAT...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCCACGTGTTTTCGCCTTaGGCTTCCAGTCGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVHVFSP*ASSREE
Trigger: CTCCTCACGACTGGAAGCTCAAGGCGAAAACACGTG...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACTTCAGCTCCTGGGGATaGGAGGTGAAAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHFSSWG*EVKALT
Trigger: AGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAA...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCTCATGGTCATTaGTGTAGATCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHCPHGH*CRSGSP
Trigger: AGGAGATCCTGATCTACATCAATGACCATGAGGACA...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGCAGGAGTGGAACCTCTaGCAGGCTGTGCCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLQEWNL*QAVPVS
Trigger: AGACACGGGCACAGCCTGTCAGAGGTTCCACTCCTG...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAAGGCCCGGCGGCCGGTaGTCAACGGAGCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSRPGGR*STEPQA
Trigger: GGCTTGTGGCTCCGTTGAGCACCGGCCGCCGGGCCT...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGCCAGTCGTTCATCCTaGCCGCCTGAGGGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSASRSS*PPEGPV
Trigger: CACGGGACCCTCAGGCGGGCAGGATGAACGACTGGC...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGCATCCACCTTTGAGCACCAACGCCTTGCTGGCAGGGAGGCTGAGTGGCAGCAGGCCAGGTATCTGCTaGAGACCAGACACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LHPPLSTNALLAGRLSGSRPGIC*RPDTRR
Trigger: CCTTCTGGTGTCTGGTCTGCAGCAGATACCTGGCCT...GCTGCCACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGTACCCGACTCCACCTaGTTCACCTCTTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAVPDST*FTSSEL
Trigger: GAGCTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTAC...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGGGAAAGCCGGAGGACTaGAGGAGCACCATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLGKPED*RSTMEA
Trigger: AGCCTCCATGGTGCTCCTGCAGTCCTCCGGCTTTCC...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CCTCGGCTGGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCCGGAGGACTGCATCCAGCTGGACCAGCTaGAGTCGTGGCGTCGTTGCG +
Preference number: 4 (lower is better)
Translates to: PRLAVYWHPESRESRRTASSWTS*SRGVVA
Trigger: CGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGA...TGCAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp ACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCCTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TEWTPMGLTRPNPSMSPLLLVFS*HDLKLV
Trigger: CACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAG...GAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR GCA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTACCACCATGTTGTCCTaGTCGTATTCAGTTGCCACG +
Preference number: 4 (lower is better)
Translates to: HHGVRAHGTQACWVSAAATTMLS*SYSVAT
Trigger: CGTGGCAACTGAATACGAGCAGGACAACATGGTGGT...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCTGGACGGTGGCAATGTaGTACAACCTCTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAWTVAM*YNLSLS
Trigger: AGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCA...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCACCCGCAAGTGCTGTGTaGGGACGCTCTGCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPPASAV*GRSAAP
Trigger: TGGCGCAGCAGAGCGTCCGCACACAGCACTTGCGGG...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS-3UTR GCA 90 bp GGCAGCTCCTGTAACTGTTCGGCAATGGATGTTTCCAGGACCAGGGAGGTCTGGAACCCAGGAGAGGCCTaGACCATGGCCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GSSCNCSAMDVSRTREVWNPGEA*TMASCP
Trigger: AGGGCAGCTGGCCATGGTGCAGGCCTCTCCTGGGTT...CCAGACCTCCCTGGTCCTGGAAACATCCATTGCCGAACAGTTACAGGAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp ACCTGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCCTCCTCCTCCCGGGCTaGAGGGAAGTTAGGAACACT +
Preference number: 4 (lower is better)
Translates to: TCPTHHSPGRGVKSRALLLLLPG*REVRNT
Trigger: AGTGTTCCTAACTTCCCTGCAGCCCGGGAGGAGGAG...GAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp CCTGGGGCCCCTTGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACACTTCAGAGCCTCCCTaGTGTGAAACACATTTTCAC +
Preference number: 4 (lower is better)
Translates to: PGAPCPAGHGSVAWQPAHTSEPP*CETHFH
Trigger: GTGAAAATGTGTTTCACAGCAGGGAGGCTCTGAAGT...GTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCGCAACCTTTTGTCCTaGGAAGCAGAGATAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQRNLLS*EAEIGE
Trigger: CTCTCCTATCTCTGCTTCCCAGGACAAAAGGTTGCG...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGTCTCTCCACCCCCGACCTGGAAGGAGTCCTCTCTGAACCGCAGCAGCTCCGGCGCAACCTTTTGTCCTaGGAAGCAGAGATAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GLSTPDLEGVLSEPQQLRRNLLS*EAEIGE
Trigger: CTCTCCTATCTCTGCTTCCCAGGACAAAAGGTTGCG...CCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGTCCCGGAGCTGGTCTTaGAAGAGGAGACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: SCPAEKLWNLKGTWAVSWSRSWS*KRRPLS
Trigger: GGAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGA...CCACGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACTCAAAACCAGAGCTTaGCTCCCGGAGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPLKTRA*LPELVL
Trigger: CAAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAG...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAACGGGAACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCCTTCAGAGCTCATGCTaGCTGAGGGTACCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PTGTLEGDVGGFLEGRRSLQSSC*LRVPCR
Trigger: TCTACAAGGTACCCTCAGCCAGCATGAGCTCTGAAG...GGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTTCCCGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QTAQRTMCMHARLDREVTRSASR*EIPASN
Trigger: GTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCT...GGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTGACAGCCTCGGCTaGCTGTTTATTGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAADSLG*LFIGIQ
Trigger: CTGGATGCCAATAAACAGCCAGCCGAGGCTGTCAGC...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGGTTCCTCGGCAGTCCTaGGCCACTCTGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQVPRQS*ATLLKA
Trigger: TGCCTTTAGCAGAGTGGCCCAGGACTGCCGAGGAAC...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCAACCATGTACCTCAGCTaGAAGCCAGGAGACCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPTMYLS*KPGDPA
Trigger: TGCTGGGTCTCCTGGCTTCCAGCTGAGGTACATGGT...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTGCAGCGCCGCTCACCTaGCTTCAGGAACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LHSPPCCPARIQLPRPQAAAPLT*LQEPRA
Trigger: GGCCCTGGGTTCCTGAAGCCAGGTGAGCGGCGCTGC...AGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCAGCGCCGCTCACCTaGCTTCAGGAACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSAAPLT*LQEPRA
Trigger: GGCCCTGGGTTCCTGAAGCCAGGTGAGCGGCGCTGC...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAAGGAGATGCTTCATCTaGACGGCAGCAGATCCGATG +
Preference number: 4 (lower is better)
Translates to: PALGLCFLSQVHRSARWARRCFI*TAADPM
Trigger: CATCGGATCTGCTGCCGTCCAGATGAAGCATCTCCT...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACAGGAGATGCTTCATCTaGACGGCAGCAGATCCGATG +
Preference number: 4 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHRRCFI*TAADPM
Trigger: CATCGGATCTGCTGCCGTCCAGATGAAGCATCTCCT...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GGCAGCTCCTGTAACTGTTCGGCAATGGATGTTTCCAGGACCAGGGAGGTCTGGTTGCCCTGCCGGGCATaGGTCAGTAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSCNCSAMDVSRTREVWLPCRA*VSSMAA
Trigger: GGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAA...CCAGACCTCCCTGGTCCTGGAAACATCCATTGCCGAACAGTTACAGGAGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCCCTGCAGAGAAGCTCTaGAACTTGAAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVPAEKL*NLKGTW
Trigger: CCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGG...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCCGGGCTTGGACCACTaGCCACCTTCAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLPGLDH*PPSEIC
Trigger: ACATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGG...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGTGGTTTGATCTCCGGGCTTaGACCACTGGCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: SCPAEKLWNLKGTWAVSWFDLRA*TTGHLQ
Trigger: CTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAA...CCACGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGACCCAGCATCAAAGGTGCCATCTCTGCTCACAGGCACGAGGATGTGGGTCAGTTGGAGATGAGCGGCTaGCGGCAGCAGAGGCACACG +
Preference number: 4 (lower is better)
Translates to: RPSIKGAISAHRHEDVGQLEMSG*RQQRHT
Trigger: CGTGTGCCTCTGCTGCCGCCAGCCGCTCATCTCCAA...CTGACCCACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCCACAGTCAAACTGCAAGCCGATaGTGTAGGTCTCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: RVIEAEDLVHHVGLQLHSQTASR*CRSLHP
Trigger: GGGGTGGAGAGACCTACACCATCGGCTTGCAGTTTG...ACTGTGGAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CATCCTCAGAGCTTTTCAGGAGTGGAACCTCTGACAGGCTGTGCCCGTGTCTTCTCGAGGTACTGGCGCTaGCGGGCTCGAAGGGGACGT +
Preference number: 4 (lower is better)
Translates to: HPQSFSGVEPLTGCARVFSRYWR*RARRGR
Trigger: ACGTCCCCTTCGAGCCCGCCAGCGCCAGTACCTCGA...GAAGACACGGGCACAGCCTGTCAGAGGTTCCACTCCTGAAAAGCTCTGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGCAGACAGGCCCCAGCTaGGTGCCGCAGGAAGGACGT +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSQTGPS*VPQEGR
Trigger: ACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTG...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
3UTR CAA 72 bp CAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTaGGACAGAGAGGTGACCGAAGCTGCATTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QTAQRTMCMHAR*DREVTEAALPS
Trigger: GGACGGCAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
3UTR CAA 72 bp AAACGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTaGTCACTGGCCCTACAGGGTCCCATGTCGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KRSRGPSGGSVS*SLALQGPMSVL
Trigger: GAGGACCGACATGGGACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAACAAGCACGTTTTGGGTaGAGATCCTGTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQQARFG*RSCASR
Trigger: ACGACTGGCACAGGATCTTCACCCAAAACGTGCTTG...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTACTCCAGCTGGAAGATaGCCGCAAATGCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHITPAGR*PQMQGG
Trigger: GCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGT...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGAGAGCTCATGCTGGCTaGGGGTACCTTGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: RWTSKVTRRPCPSRCSTQRAHAG*GYLVDQ
Trigger: CTGGTCTACAAGGTACCCTCAGCCAGCATGAGCTCT...CTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSACAPW*WPGSAG
Trigger: GCCTGCTGAGCCTGGCCATCACCACGGAGCACACGC...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTTGGGGTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTGCGTGTGCTCCGTGGTaGTGGCCAGGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FGVCLQLLGMRGESSHFPACAPW*WPGSAG
Trigger: GCCTGCTGAGCCTGGCCATCACCACGGAGCACACGC...AGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGACCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCATTGCCACGTCCACCAGGTTaGGATGGACAAAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTMCMHARLDREVTEAALPRPPG*DGQSGC
Trigger: GCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGG...CAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTTCCTCACCCACTCTCTaGCTAGGCGCAAACTGCAAG +
Preference number: 4 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFSSPTL*LGANCK
Trigger: CTTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGA...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGCATCCAAGTGCCCCGTaGTGGGCTTCTGGAGGCGAG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSHPSAP*WASGGE
Trigger: CTCGCCTCCAGAAGCCCATCACGGGGCACTTGGATG...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGGGGAGGGGTACAGGGTaGAGAATAAGTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: ALGLCFLSQVHRSARWALGRGTG*RISHPS
Trigger: ACTTGGATGACTTATTCTTCACCCTGTACCCCTCCC...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGATGGGCCGGGGAGGCCTaGGAGCCATGGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRWAGEA*EPWGSC
Trigger: ACAGCTACCCCATGGCTCTCAGGCCTCCCCGGCCCA...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTGCATAGACATCGATaGTTCCGGAACCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPLHRHR*FRNLSH
Trigger: GTGACTGAGGTTCCGGAATCATCGATGTCTATGCAG...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTATGGGTGAAGATCCTGTaGCAGTCGTTCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALWVKIL*QSFILP
Trigger: GGGCAGGATGAACGACTGGCACAGGATCTTCACCCA...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCGGCTTCAGCGTGTACTaGAGGCTGCAGTTCTCAATG +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVGFSVY*RLQFSM
Trigger: CATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCC...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACAGGCCAGGTATCTGCTaGAGACCAGACACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHRPGIC*RPDTRR
Trigger: CCTTCTGGTGTCTGGTCTGCAGCAGATACCTGGCCT...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTCTCGAGGGCTGCCCTaGAGAGCTCCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ILLLTPFPSPAANMISKASRGLP*RAPGLG
Trigger: ACCCAGACCAGGAGCTCTGCAGGGCAGCCCTCGAGA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGAGGCTCTCGAGGGCTaGCCTGCAGAGCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSEALEG*PAELLV
Trigger: GACCAGGAGCTCTGCAGGGCAGCCCTCGAGAGCCTC...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGTCCAGCTGGACCAGCTaGAGTCGTGGCGTCGTTGCG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSSSWTS*SRGVVA
Trigger: CGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGA...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CATCCTCAGAGCTTTTCAGGAGTGGAACCTCTGACAGGCTGTGCCCGTGTCTTCTCCAGCTGGACCAGCTaGAGTCGTGGCGTCGTTGCG +
Preference number: 4 (lower is better)
Translates to: HPQSFSGVEPLTGCARVFSSWTS*SRGVVA
Trigger: CGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGA...GAAGACACGGGCACAGCCTGTCAGAGGTTCCACTCCTGAAAAGCTCTGAGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp AACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGACCCAGCATCAAAGGTaGCATCTCTGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: NSRRGRGWFPGRPPLHFGTQHQR*HLCSQA
Trigger: TGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGT...CCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCACCCAGCATCAAAGGTaGCATCTCTGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVTQHQR*HLCSQA
Trigger: TGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGT...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp TTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGTTGGCCAAAGTCAGGTaGAGCCGGCCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: FLSTNSKNSATPSVAWSVLAKVR*SRPFTT
Trigger: GGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAA...CACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GATGTAGATCAGGATCTCCTCCTCACCCACTCTCTGACTAGGCGCAAACTGCAATGGGGCCCCTTGCCCTaGCGGGCATGGGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: DVDQDLLLTHSLTRRKLQWGPLP*RAWVSS
Trigger: GCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCA...TTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGAGGAGATCCTGATCTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCTCCAGCTTACGCCTaGGGGTGGCATCCGACTCGC +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTAPAYA*GWHPTR
Trigger: GCGAGTCGGATGCCACCCGCAGGCGTAAGCTGGAGC...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATC +
Preference number: 4 (lower is better)
Translates to: STHHHVVLLVFSCHDLKLSPPAS*RRTDLI
Trigger: GATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGA...GAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATTGTGTGCGGACGCTCTaGTGCGCCAACACGCTCGTC +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDCVRTL*CANTLV
Trigger: GACGAGCGTGTTGGCGCAGCAGAGCGTCCGCACACA...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACATGCTCTCGGCCTTCGTaGGTTCCCGGTAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTCSRPS*VPGRRR
Trigger: TCGCCGCCTACCGGGAACGCACGAAGGCCGAGAGCA...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTCATGGCCAGCTGCCCTaGAGAGAAGCTCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFHGQLP*REALEL
Trigger: AAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGCCATG...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATAACCCAGGAGAGGCCTaGACCATGGCCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDNPGEA*TMASCP
Trigger: AGGGCAGCTGGCCATGGTGCAGGCCTCTCCTGGGTT...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGTCCACCACGTGGGGCTaGAGCTCCACAGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSSTTWG*SSTVRQ
Trigger: CTGCCTGACTGTGGAGCTGCAGCCCCACGTGGTGGA...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAGGCCTCACGCCAACATaGAGGTCCTGCACCCCACGA +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPGLTPT*RSCTPR
Trigger: TCGTGGGGTGCAGGACCTGCATGTTGGCGTGAGGCC...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATTCCGGGTGGTCGCTGTaGAGGTGGAATGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDSGWSL*RWNVLR
Trigger: CCGGAGGACATTCCACCTGCACAGCGACCACCCGGA...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGCGCAACCTTTTGTCCTaGGAAGCAGAGATAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSRNLLS*EAEIGE
Trigger: CTCTCCTATCTCTGCTTCCCAGGACAAAAGGTTGCG...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGCTCTGGGGGTGCCATaGTACAGCCGCAACCTTTTG +
Preference number: 4 (lower is better)
Translates to: QTAQRTMCMHARLDREVTALGVP*YSRNLL
Trigger: CAAAAGGTTGCGGCTGTACCATGGCACCCCCAGAGC...GGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGGATTCTCCATGAGCTaGAAGCAGGCCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: LHSQAEHGDGLATTRSEQGFSMS*KQARYL
Trigger: CAGATACCTGGCCTGCTTCCAGCTCATGGAGAATCC...TTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TCTGCATCCACCTTTGAGCACCAACGCCTTGCTGGCAGGGAGGCTGAGTGGCAGCTCAAAACCAGAGCTTaGCTCCCGGAGCTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SASTFEHQRLAGREAEWQLKTRA*LPELVL
Trigger: CAAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAG...CTGCCACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTGTTCCTCGGCAGTCCTaGGCCACTCTGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIVPRQS*ATLLKA
Trigger: TGCCTTTAGCAGAGTGGCCCAGGACTGCCGAGGAAC...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCAGCGCCGCTCACCTaGCTTCAGGAACCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSAAPLT*LQEPRA
Trigger: GGCCCTGGGTTCCTGAAGCCAGGTGAGCGGCGCTGC...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACACCAGGCTCAGCAGGCTaGCGATGCTCTCGGCCTTCG +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTPGSAG*RCSRPS
Trigger: CGAAGGCCGAGAGCATCGCCAGCCTGCTGAGCCTGG...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAACCCCCAGCGTGGCGTaGAGCGTGTGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRTPSVA*SVCSVV
Trigger: CACCACGGAGCACACGCTCCACGCCACGCTGGGGGT...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCCGGGGCCCACATTCTaGGTCTCACAGATGACGTTC +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIPGPTF*VSQMTF
Trigger: GAACGTCATCTGTGAGACCCAGAATGTGGGCCCCGG...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTCAGAAATATGTCCCGTaGTTCCCCGGGGCCCACATT +
Preference number: 4 (lower is better)
Translates to: WVSSMAASSLSTSASFCAQKYVP*FPGAHI
Trigger: AATGTGGGCCCCGGGGAACCACGGGACATATTTCTG...AGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGCAGAAATATGTCCCGTaGTTCCCCGGGGCCCACATT +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWQKYVP*FPGAHI
Trigger: AATGTGGGCCCCGGGGAACCACGGGACATATTTCTG...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATTGGTCGCTGTGCAGGTaGAATGTCCTCCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDWSLCR*NVLREG
Trigger: CCCCTCCCGGAGGACATTCCACCTGCACAGCGACCA...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTACAAACTGCAAGCCGATaGTGTAGGTCTCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALQTASR*CRSLHP
Trigger: GGGGTGGAGAGACCTACACCATCGGCTTGCAGTTTG...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGGCTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDGSKGT*VVSWKA
Trigger: GGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGCC...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAGAGAACTCGAGGTACTaGCGCTGGCGGGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPENSRY*RWRARR
Trigger: CCTTCGAGCCCGCCAGCGCCAGTACCTCGAGTTCTC...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGAGAACTCGAGGTACTaGCGCTGGCGGGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSENSRY*RWRARR
Trigger: CCTTCGAGCCCGCCAGCGCCAGTACCTCGAGTTCTC...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCAGCAGCAGCTAAGCTaGATGCAGGTACTACAAAAT +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLQQQLS*MQVLQN
Trigger: ATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCGGTGTGTGCAGGCCAGCAGCACCCTTGAAGTCCCTCCACTCCTGACTGTCCCTTTGCAGGGGGATTaGAGCTGGCCTTTCACACTT +
Preference number: 4 (lower is better)
Translates to: HRCVQASSTLEVPPLLTVPLQGD*SWPFTL
Trigger: AAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGG...GACAGTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCCTGCACACACCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTCAAGCACGTTTTGGGTaGAGATCCTGTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVQARFG*RSCASR
Trigger: ACGACTGGCACAGGATCTTCACCCAAAACGTGCTTG...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACAGAAGTGCCGGTAGGTaGCATCAAAGAAAGACACTC +
Preference number: 4 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHRSAGR*HQRKTL
Trigger: GAGTGTCTTTCTTTGATGTCACCTACCGGCACTTCT...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAACCACAGCCACGATATaGGGGTGGTTTAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALTTATI*GWFRDV
Trigger: CACATCCCTAAACCACCCTCATATCGTGGCTGTGGT...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCAAGTCCGGCTGGTTGCTaGAGATCCGAAGAATTCCAA +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPSPAGC*RSEEFQ
Trigger: TTGGAATTCTTCGGATCTTCAGCAACCAGCCGGACT...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCGGGCATGCAAAGGCGTaGACGGCAGCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: HHVVLLVFSCHDLKLVGGGHAKA*TAAPVT
Trigger: AGTTACAGGAGCTGCCGTTCACGCCTTTGCATGCCC...GCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGGCCAGCAGCACCCTTaGAGTCCCTCCACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQGQQHP*SPSTPD
Trigger: GTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGGGCCAGCAGCACCCTTaGAGTCCCTCCACTCCTGAC +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQGQQHP*SPSTPD
Trigger: GTCAGGAGTGGAGGGACTTCAAGGGTGCTGCTGGCC...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCAGTCTATGTTCCTCCTaGCCTTCTCTCCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLSLCSS*PSLHFS
Trigger: GGAGAAATGGAGAGAAGGTCAGGAGGAACATAGACT...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACGGAGGGCTCTGGGGGTaGCATGGTACAGCCGCAACC +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDGGLWG*HGTAAT
Trigger: GGTTGCGGCTGTACCATGGCACCCCCAGAGCCCTCC...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTGGAGGGCTCTGGGGGTaGCATGGTACAGCCGCAACC +
Preference number: 4 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCGGLWG*HGTAAT
Trigger: GGTTGCGGCTGTACCATGGCACCCCCAGAGCCCTCC...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCATCCTGGAGAAGCGGGTaGAGGAGGGCTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSSWRSG*RRALGV
Trigger: CACCCCCAGAGCCCTCCTGCACCCGCTTCTCCAGGA...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CAAACAGCCCAGCGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGATGACCGCAAATaGAGGGTGGCCGACCATCTC +
Preference number: 4 (lower is better)
Translates to: QTAQRTMCMHARLDREVTEDDRK*RVADHL
Trigger: GAGATGGTCGGCCACCCTGCATTTGCGGTCATCTTC...GGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCGCTGGGCTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTATTGCCGTCCACTCCTaGAGGGCTGCTGAACACGTA +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIIAVHS*RAAEHV
Trigger: TACGTGTTCAGCAGCCCTGCAGGAGTGGACGGCAAT...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATCAGTCGTGGCGTCGTTaGGGGTGGGAAGCGGTAGAA +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDQSWRR*GWEAVE
Trigger: TTCTACCGCTTCCCACCCGCAACGACGCCACGACTG...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCTCCAGCTGGACCAGCTaGAGTCGTGGCGTCGTTGCG +
Preference number: 4 (lower is better)
Translates to: HVSTHHHVVLLVFSCHDLSSWTS*SRGVVA
Trigger: CGCAACGACGCCACGACTGCAGCTGGTCCAGCTGGA...GAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR GCA 90 bp CGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTCAAAGGTGCCATCTCTaGTCACAGGCACGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RSRGPSGGSVSLSLALQGQRCHL*SQARGC
Trigger: ACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTG...ACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTACTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALLLVFS*HDLKLV
Trigger: CACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAG...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCATGTAGGTCCCGCAAGTaGTGTGTGCGGACGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPCRSRK*CVRTLC
Trigger: GCAGAGCGTCCGCACACAGCACTTGCGGGACCTACA...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACTGCTCTCGGCCTTCGTaGGTTCCCGGTAGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDCSRPS*VPGRRR
Trigger: TCGCCGCCTACCGGGAACGCACGAAGGCCGAGAGCA...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGTCCTCCACCGGTGTGTaGAGGCCAGCAGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQSSTGV*RPAAPL
Trigger: CAAGGGTGCTGCTGGCCTGCACACACCGGTGGAGGA...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCTCCACCACGTGGGGCTaGAGCTCCACAGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HVSTHHHVVLLVFSCHDLSTTWG*SSTVRQ
Trigger: CTGCCTGACTGTGGAGCTGCAGCCCCACGTGGTGGA...GAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGCCAGCGCTCGGTCTCTaGTTCCTCAGCCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSPALGL*FLSQVH
Trigger: GTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGACTGGCGCGCTCTCTGTaGGTGGGGAGGGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRLARSL*VGRDKH
Trigger: GTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAG...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTCGTCGGCTTCACTGTaGTTTTCCACGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVSSASL*FSTSSQ
Trigger: TTGGGAGGACGTGGAAAACCACAGTGAAGCCGACGA...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAACACGTACTCCAGCTaGAAGATGACCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: APQSGRARRWACHHSLGTNTYSS*KMTANA
Trigger: TGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTT...TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCGAGCCCAGCGAGAACTaGAACCGGAGTGTACCCGAC +
Preference number: 4 (lower is better)
Translates to: ILLLTPFPSPAANMISKAEPSEN*NRSVPD
Trigger: GTCGGGTACACTCCGGTTCCAGTTCTCGCTGGGCTC...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDRSASR*EIPASN
Trigger: GTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCT...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGTAACTGTTCGGCAATaGATGTTTCCAGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: NSRRGRGWFPGRPPLHFGVTVRQ*MFPGPG
Trigger: CCCTGGTCCTGGAAACATCCATTGCCGAACAGTTAC...CCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGGCAGAGCTCCTGGTCTaGGTTCCCACAACAATAGGG +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLAELLV*VPTTIG
Trigger: CCCTATTGTTGTGGGAACCCAGACCAGGAGCTCTGC...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGACTGCAGGAGCACCATaGAGGCTCTCGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQTAGAP*RLSRAA
Trigger: GGCAGCCCTCGAGAGCCTCCATGGTGCTCCTGCAGT...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCTTTGCTCAGGCCCTCTAACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCGACCAGCTGCAGTCGTaGCGTCGTTGCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: ALLRPSNEQSRGTIFYKVDQLQS*RRCGWE
Trigger: TTCCCACCCGCAACGACGCCACGACTGCAGCTGGTC...GACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGGGCCTGAGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATGCGCCAGAGCTGGGCTaGCCGGCCTCATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYAPELG*PASSSW
Trigger: CCAGCTGGATGAGGCCGGCCAGCCCAGCTCTGGCGC...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGAGGAGATGCTTCATCTaGACGGCAGCAGATCCGATG +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWRRCFI*TAADPM
Trigger: CATCGGATCTGCTGCCGTCCAGATGAAGCATCTCCT...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCCCCTTCACCACCGAGTaGACGCCGATGGGCTTGACG +
Preference number: 4 (lower is better)
Translates to: STHHHVVLLVFSCHDLKLPFTTE*TPMGLT
Trigger: CGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAGGG...GAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CCA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTCCGAGATCTGGACGGTaGCAATGTGCTACAACCTCT +
Preference number: 4 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFPRSGR*QCATTS
Trigger: AGAGGTTGTAGCACATTGCCACCGTCCAGATCTCGG...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTTTGCCCTGCCGGGCATaGGTCAGTAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSLPCRA*VSSMAA
Trigger: GGCTGCCATGCTACTGACCCATGCCCGGCAGGGCAA...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGAGGCTGCCACGCAGGTaGAACATGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSRLPRR*NMSSST
Trigger: GGTGGAGGAGGACATGTTCCACCTGCGTGGCAGCCT...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGAGAGGCCTGCACCATaGCCAGCTGCCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQERPAP*PAALQR
Trigger: TCTCTGCAGGGCAGCTGGCCATGGTGCAGGCCTCTC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGGAGAGGCCTGCACCATaGCCAGCTGCCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGERPAP*PAALQR
Trigger: TCTCTGCAGGGCAGCTGGCCATGGTGCAGGCCTCTC...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp TTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCAT +
Preference number: 4 (lower is better)
Translates to: FLSTNSKNSATPSVAWSVAANMD*GVLTKH
Trigger: ATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGC...CACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGCCGGGGCCCACATTCTaGGTCTCACAGATGACGTTC +
Preference number: 4 (lower is better)
Translates to: FLSTNSKNSATPSVAWSVPGPTF*VSQMTF
Trigger: GAACGTCATCTGTGAGACCCAGAATGTGGGCCCCGG...CACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGCCGGGCTTGGACCACTaGCCACCTTCAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWPGLDH*PPSEIC
Trigger: ACATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGG...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCCTGCCACGTCTGTGTaGGTGTCGCCAGCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQPATSV*VSPASD
Trigger: ATCGCTGGCTGGCGACACCCACACAGACGTGGCAGG...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTCCACCAGGTTGAGATaGACAAAGCGGCTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: ILLLTPFPSPAANMISKASTRLR*TKRLPA
Trigger: GGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGAGGCCACCAGCTGGTaGCAATCCACGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTEATSW*QSTSTR
Trigger: CCTGGTGGACGTGGATTGCCACCAGCTGGTGGCCTC...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGGAGGCCACCAGCTGGTaGCAATCCACGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGEATSW*QSTSTR
Trigger: CCTGGTGGACGTGGATTGCCACCAGCTGGTGGCCTC...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCAGGAGGCCACCAGCTaGTGGCAATCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: LHSPPCCPARIQLPRPQAQEATS*WQSTST
Trigger: GGTGGACGTGGATTGCCACCAGCTGGTGGCCTCCTG...AGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCACATCCCTCCTGGAAGTaGTCCTGGACGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPHPSWK*SWTWSS
Trigger: GGAGCTCCACGTCCAGGACCACTTCCAGGAGGGATG...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGGCTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQGSKGT*VVSWKA
Trigger: GGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGCC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGATCGAGGTACTGGCGCTaGCGGGCTCGAAGGGGACGT +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRSRYWR*RARRGR
Trigger: ACGTCCCCTTCGAGCCCGCCAGCGCCAGTACCTCGA...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCTGGTCGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCTTCCCTTGTGGGTCTaGGGGCTTCCGGTCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PWSLCHTRLHCIRSLHRHLPLWV*GLPVAA
Trigger: TGCGGCGACCGGAAGCCCCCAGACCCACAAGGGAAG...ATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CCCTGGTCGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCTGGAACGTCCCAGGTaGGACCCTCCTGAGCCACCC +
Preference number: 4 (lower is better)
Translates to: PWSLCHTRLHCIRSLHRHLERPR*DPPEPP
Trigger: GGGTGGCTCAGGAGGGTCCCACCTGGGACGTTCCAG...ATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CAA 72 bp CTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LHSPPCCPARIQ*PRPQARGRPAQ
Trigger: CTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR TCA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATACTCCAGCTGGAAGATaGCCGCAAATGCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDTPAGR*PQMQGG
Trigger: GCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGT...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTCTCCTGCAGGGCTGCTaGACACGTACTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSLLQGC*TRTPAG
Trigger: TCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAG...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCTCCTGCAGGGCTGCTaGACACGTACTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQLLQGC*TRTPAG
Trigger: TCCAGCTGGAGTACGTGTTCAGCAGCCCTGCAGGAG...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GATGTAGATCAGGATCTCCTCCTCACCCACTCTCTGACTAGGCGCAAACTGCAACCACTTTGGGGCCACTaGCAGGCTCCGTGGGTGCAT +
Preference number: 4 (lower is better)
Translates to: DVDQDLLLTHSLTRRKLQPLWGH*QAPWVH
Trigger: ATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGG...TTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGAGGAGATCCTGATCTACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCTGATTCTTCCTTCTaGGGGTTAAACGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVSDSSF*GLNVTG
Trigger: ACCTGTGACGTTTAACCCTCAGAAGGAAGAATCAGA...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CCTCGGCTGGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCCGGAGGACTGCACTCCATCGTTTGAGATaGCCCGAGATCTGGACGGTG +
Preference number: 4 (lower is better)
Translates to: PRLAVYWHPESRESRRTALHRLR*PEIWTV
Trigger: CACCGTCCAGATCTCGGGTCATCTCAAACGATGGAG...TGCAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACACCACGTCCACCAGGTTaGGATGGACAAAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTPRPPG*DGQSGC
Trigger: GCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGG...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGGGGAGGGGTACAGGGTaGAGAATAAGTCATCCAAGT +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWGRGTG*RISHPS
Trigger: ACTTGGATGACTTATTCTTCACCCTGTACCCCTCCC...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTGCCCTCACTGGTAGATaGCCTTCACGCAAAATGCCT +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIALTGR*PSRKMP
Trigger: AGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGC...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGACCAGTACAACGACCTaGGGCCTCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQTSTTT*GLCTKP
Trigger: GGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGT...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CGGACCATGTGCATGCATGCCAGGTTGGACAGAGAGGTGACCGAAGCTGCATTGATTGCCGTCCACTCCTaGAGGGCTGCTGAACACGTA +
Preference number: 4 (lower is better)
Translates to: RTMCMHARLDREVTEAALIAVHS*RAAEHV
Trigger: TACGTGTTCAGCAGCCCTGCAGGAGTGGACGGCAAT...CAATGCAGCTTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCACATGGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGGGAAAGCCGGAGGACTaGAGGAGCACCATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQGKPED*RSTMEA
Trigger: AGCCTCCATGGTGCTCCTGCAGTCCTCCGGCTTTCC...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGGTAGCACCATCTCGTTaGTTTGTAGACAATCTGATT +
Preference number: 4 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLVAPSR*FVDNLI
Trigger: AATCAGATTGTCTACAAAGCAACGAGATGGTGCTAC...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCAAAGGTGCCATCTCTaGTCACAGGCACGAGGATGT +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIQRCHL*SQARGC
Trigger: ACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTG...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGTCCCAGACGTCAATCTaGAGGGTCTGCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQSQTSI*RVCTAR
Trigger: CCTGGCCGTGCAGACCCTGCAGATTGACGTCTGGGA...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp TCCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACACCACCATGTTGTCCTaGTCGTATTCAGTTGCCACG +
Preference number: 4 (lower is better)
Translates to: SDEQQGVSVPDVNLQGLHTTMLS*SYSVAT
Trigger: CGTGGCAACTGAATACGAGCAGGACAACATGGTGGT...GTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTACCACCATGTTGTCCTaGTCGTATTCAGTTGCCACG +
Preference number: 4 (lower is better)
Translates to: RSRGPSGGSVSLSLALQGTTMLS*SYSVAT
Trigger: CGTGGCAACTGAATACGAGCAGGACAACATGGTGGT...ACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCATGGACGGTGGCAATGTaGTACAACCTCTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAAWTVAM*YNLSLS
Trigger: AGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCA...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CCTCGGCTGGCTGTTTATTGGCATCCAGAATCTCGGGAAAGCCGGAGGACTGCAGTCCGCCAGCTTCTGTaGTTGCACCACGTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PRLAVYWHPESRESRRTAVRQLL*LHHVFS
Trigger: CGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGAC...TGCAGTCCTCCGGCTTTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCTGGGGCCCCTTGCCCTaGCGGGCATGGGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSWGPLP*RAWVSS
Trigger: GCTACTGACCCATGCCCGGCAGGGCAAGGGGCCCCA...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGATGTGTGCGGACGCTCTaGTGCGCCAACACGCTCGTC +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRCVRTL*CANTLV
Trigger: GACGAGCGTGTTGGCGCAGCAGAGCGTCCGCACACA...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS-3UTR GCA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGGACCTTCACGCAAAATaGCTCTTCGTTTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSDLHAK*LFVFVL
Trigger: GAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTC...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCAGGCCCCAGCTGGGTaGCGCAGGAAGGACGTCACC +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSQAPAG*RRKDVT
Trigger: GGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCTGGGCCGAGAAGAAATaGGCCTCTTCACTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HHVVLLVFSCHDLKLVGGWAEKK*ASSLSS
Trigger: GGAGGAGAGTGAAGAGGCGCATTTCTTCTCGGCCCA...GCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGGGGACAAGCACGTTTTaGGTGAAGATCCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLGTSTF*VKILCQ
Trigger: CTGGCACAGGATCTTCACCCAAAACGTGCTTGTCCC...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCGCGCTCTCTGTGGGTaGGGAGGGACAAGCACGTTT +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQRALCG*GGTSTF
Trigger: AAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCG...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAAAGACACTCGCAGATaGCATTCAACCTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGKDTRR*HSTSDS
Trigger: ACTGTCAGAGGTTGAATGCCATCTGCGAGTGTCTTT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAACCGCAAATGCAGGGTaGCCGACCATCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTTANAG*PTISGR
Trigger: CCTCCCAGAGATGGTCGGCCACCCTGCATTTGCGGT...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTAACACGTACTCCAGCTaGAAGATGACCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: QSGRARRWACHHSLGTRPNTYSS*KMTANA
Trigger: TGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTT...AGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCACGTGGGTGGTTTCCTaGAAGGCCGCCGCTCCACTT +
Preference number: 4 (lower is better)
Translates to: HVSTHHHVVLLVFSCHDLTWVVS*KAAAPL
Trigger: AAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGT...GAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp TTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGCGTGGCGTGGAGCGTGGCAGAGCTCCTGGTCTaGGTTCCCACAACAATAGGG +
Preference number: 4 (lower is better)
Translates to: FLSTNSKNSATPSVAWSVAELLV*VPTTIG
Trigger: CCCTATTGTTGTGGGAACCCAGACCAGGAGCTCTGC...CACGCTCCACGCCACGCTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GATGTAGATCAGGATCTCCTCCTCACCCACTCTCTGACTAGGCGCAAACTGCAAACTGCAGGAGCACCATaGAGGCTCTCGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DVDQDLLLTHSLTRRKLQTAGAP*RLSRAA
Trigger: GGCAGCCCTCGAGAGCCTCCATGGTGCTCCTGCAGT...TTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGAGGAGATCCTGATCTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACGACCAGCTGCAGTCGTaGCGTCGTTGCGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDDQLQS*RRCGWE
Trigger: TTCCCACCCGCAACGACGCCACGACTGCAGCTGGTC...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCCCCAGCGTGGCGTaGAGCGTGTGCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSTPSVA*SVCSVV
Trigger: CACCACGGAGCACACGCTCCACGCCACGCTGGGGGT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GATGTAGATCAGGATCTCCTCCTCACCCACTCTCTGACTAGGCGCAAACTGCAATCCCACCGGAGCACCTaGAAATGTGTGCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DVDQDLLLTHSLTRRKLQSHRST*KCVPGR
Trigger: CCGCCCTGGCACACATTTCCAGGTGCTCCGGTGGGA...TTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGAGGAGATCCTGATCTACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGGGGAGGCCGCCAGCTaGGAAATTGACAACCCTGGT +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSGEAAS*EIDNPG
Trigger: ACCAGGGTTGTCAATTTCCCAGCTGGCGGCCTCCCC...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGCAGCAGCAGCTAAGCTaGATGCAGGTACTACAAAAT +
Preference number: 4 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSQQQLS*MQVLQN
Trigger: ATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CCCTGGTCGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCTGACCCTTCCCTTGTaGGTCTGGGGGCTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: PWSLCHTRLHCIRSLHRHLTLPL*VWGLPV
Trigger: GACCGGAAGCCCCCAGACCCACAAGGGAAGGGTCAG...ATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
3UTR CAA 72 bp AACATCCAAGGCTCTGGCTGTTCCTTTGCAGGGGGATaGGAGCTGGCCTTTCACACTTGGGGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: NIQGSGCSFAGG*ELAFHTWGLHQ
Trigger: CTGATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 72 bp CTGCGCTTTCCAACATCCAAGGCTCTGGCTGTTCCTTaGCAGGGGGATTGGAGCTGGCCTTTCACACTTGGG +
Preference number: 4 (lower is better)
Translates to: LRFPTSKALAVP*QGDWSWPFTLG
Trigger: CCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTGGAAAGCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACGGAGCCACAAGCCTaGGGACCGAGGACTGGCCGA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSTEPQA*GPRTGR
Trigger: TCGGCCAGTCCTCGGTCCTCAGGCTTGTGGCTCCGT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGGGCTGCAGTTCTCAATaGGGGTCATGTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWGCSSQ*GSCVCF
Trigger: AAAACAGACACATGACCCTCATTGAGAACTGCAGCC...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTGGCTGCAGTTCTCAATaGGGGTCATGTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVGCSSQ*GSCVCF
Trigger: AAAACAGACACATGACCCTCATTGAGAACTGCAGCC...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCTGCTGAAGCTAGCTaGGCGCGTCAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDPAEAS*ARQGHI
Trigger: GATGTGGCCTTGACGCGCTCAGCTAGCTTCAGCAGG...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCACACGTGTTTTCGCCTTaGGCTTCCAGTCGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPHVFSP*ASSREE
Trigger: CTCCTCACGACTGGAAGCTCAAGGCGAAAACACGTG...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS-3UTR TCA 90 bp CATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGTCCCTCCACTCCTaGCTGTCCACGATGACGCTG +
Preference number: 4 (lower is better)
Translates to: HVSTHHHVVLLVFSCHDLKSLHS*LSTMTL
Trigger: CAGCGTCATCGTGGACAGTCAGGAGTGGAGGGACTT...GAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGAGAAGCTCTGGAACTTaGAGGGGACGTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQRSSGT*RGRGRS
Trigger: AGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCT...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCACGTCCACCAGGTTaGGATGGACAAAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDPRPPG*DGQSGC
Trigger: GCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGG...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCACGCCAGCTGGGAAATTaGCAACCCTGGTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSRQLGN*QPWSHR
Trigger: CCTGTGGGACCAGGGTTGTCAATTTCCCAGCTGGCG...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGTGGGTGAAGATCCTGTaGCAGTCGTTCATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSWVKIL*QSFILP
Trigger: GGGCAGGATGAACGACTGGCACAGGATCTTCACCCA...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCCTCTTCAGAGCTCATaGTGGCTGAGGGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: HHVVLLVFSCHDLKLVGGPLQSS*WLRVPC
Trigger: ACAAGGTACCCTCAGCCAGCATGAGCTCTGAAGAGG...GCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGGTAGCACCATCTCGTTaGTTTGTAGACAATCTGATT +
Preference number: 4 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALVAPSR*FVDNLI
Trigger: AATCAGATTGTCTACAAAGCAACGAGATGGTGCTAC...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR GCA 90 bp CTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATGAGCGGCTGACCACCATGTTGTCCTaGTCGTATTCAGTTGCCACG +
Preference number: 4 (lower is better)
Translates to: LPFARSQHDLKGLGDERLTTMLS*SYSVAT
Trigger: CGTGGCAACTGAATACGAGCAGGACAACATGGTGGT...CAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCATCAGCAGGCTGGCGATaGTCTCGGCCTTCGTGCGTT +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSSAGWR*SRPSCV
Trigger: AACGCACGAAGGCCGAGAGCATCGCCAGCCTGCTGA...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGTCCACAGTCACCGTGTaGTGTGTGTTGTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSSTVTV*CVLWGF
Trigger: GAACCCCCACAACACACAGCACACGGTGACTGTGGA...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTCCACAGTCACCGTGTaGTGTGTGTTGTGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ILLLTPFPSPAANMISKASTVTV*CVLWGF
Trigger: GAACCCCCACAACACACAGCACACGGTGACTGTGGA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGACCCACAGGTGAGTTCTaGGGGGCAGCGAGAACTCGA +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRPTGEF*GAARTR
Trigger: TCGAGTTCTCGCTGCCCCGCAGAACTCACCTGTGGG...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAGCTTCCTCAGCCAAGTaGACAGGTCAGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRASSAK*TGQPGG
Trigger: CCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGC...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATCTGGCGCGCTCTCTGTaGGTGGGGAGGGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYLARSL*VGRDKH
Trigger: GTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAG...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCAAAAGACACTCGCAGATaGCATTCAACCTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPKDTRR*HSTSDS
Trigger: ACTGTCAGAGGTTGAATGCCATCTGCGAGTGTCTTT...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCGGATTCTCCATGAGCTaGAAGCAGGCCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: HHVVLLVFSCHDLKLVGGGFSMS*KQARYL
Trigger: CAGATACCTGGCCTGCTTCCAGCTCATGGAGAATCC...GCCTCCCACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGTGGCGTCGTTGCGGGTaGGAAGCGGTAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGWRRCG*EAVELE
Trigger: TTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCA...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACACGGGTGACCCACGTTaGCCAAAGTCAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDTGDPR*PKSGAA
Trigger: GGCTGCACCTGACTTTGGCCAACGTGGGTCACCCGT...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCATCCACCAGGTTGAGATaGACAAAGCGGCTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSSTRLR*TKRLPA
Trigger: GGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGA...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCGATGATCGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: RFATLVYTAYDHCIDIDDRQQIR*AAGSLR
Trigger: ACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCG...ATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCATTGAGCTTCCAGTCGTaGGGAGGCTGCCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSLSFQS*GGCLQR
Trigger: TCTCTGGAGGCAGCCTCCTCACGACTGGAAGCTCAA...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAAGAAGCTCTGGAACTTaGAGGGGACGTGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSRSSGT*RGRGRS
Trigger: AGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCT...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTATGTCCTCATGGTCATTaGTGTAGATCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALCPHGH*CRSGSP
Trigger: AGGAGATCCTGATCTACATCAATGACCATGAGGACA...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCGTCTGTCCTCCATCATaGGGCACAGGGAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HVSTHHHVVLLVFSCHDLVCPPS*GTGKSL
Trigger: GAGAGACTTCCCTGTGCCTCATGATGGAGGACAGAC...GAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp ACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCACTCTTTTCAATTCTGCCCTaGAAAATCCCAAACGTTCCA +
Preference number: 4 (lower is better)
Translates to: TEWTPMGLTRPNPSMSPLFSILP*KIPNVP
Trigger: TGGAACGTTTGGGATTTTTCAGGGCAGAATTGAAAA...GAGTGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACGTCTGCATCCACCTTTaGGCACCAACGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDVCIHL*APTPCW
Trigger: CCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGAC...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTAGCAGGCCAGGTATCTaGTGCAGACCAGACACCAGA +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSSRPGI*CRPDTR
Trigger: TCTGGTGTCTGGTCTGCAGCAGATACCTGGCCTGCT...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGAGCGGACCATGTGCATaGATGCCAGGTTGGACAGAG +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQSGPCA*MPGWTE
Trigger: CTCTGTCCAACCTGGCATGCATGCACATGGTCCGCT...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATTCTCGAGGGCTGCCCTaGAGAGCTCCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYSRGLP*RAPGLG
Trigger: ACCCAGACCAGGAGCTCTGCAGGGCAGCCCTCGAGA...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGCTGCTCGTATTCAGTTaGCACGACCTCAAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSLLVFS*HDLKLV
Trigger: CACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAG...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCAACCCAGGAGAGGCCTaGACCATGGCCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSNPGEA*TMASCP
Trigger: AGGGCAGCTGGCCATGGTGCAGGCCTCTCCTGGGTT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGACCATGCCCTTCTCGTTaGTCAACCCAGGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRPCPSR*STQERP
Trigger: AGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGG...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAGTGACACGGCGTCCATaGCCTTCTCGTTGCTCAACC +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRVTRRP*PSRCST
Trigger: GGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCAC...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGAACGAGGGTCCCACATaGGTAGATGGCAGCACCAGA +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQNEGPT*VDGSTR
Trigger: TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTT...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATCCCGCAAGTGCTGTGTaGGGACGCTCTGCTGCGCTT +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYPASAV*GRSAAL
Trigger: AAGCGCAGCAGAGCGTCCGCACACAGCACTTGCGGG...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGGATTCTCCATGAGCTaGAAGCAGGCCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSGFSMS*KQARYL
Trigger: CAGATACCTGGCCTGCTTCCAGCTCATGGAGAATCC...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCAGAGCTCCTGGTCTaGGTTCCCACAACAATAGGG +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTAELLV*VPTTIG
Trigger: CCCTATTGTTGTGGGAACCCAGACCAGGAGCTCTGC...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTGTGTGCTGTGTGTTGTaGGGGTTCTTAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHIVCCVL*GFLSTN
Trigger: GTTTGTGCTTAAGAACCCCCACAACACACAGCACAC...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCCTGCAGAGAAGCTCTaGAACTTGAAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQPAEKL*NLKGTW
Trigger: CCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGG...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACACCTGCAGAGAAGCTCTaGAACTTGAAGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTPAEKL*NLKGTW
Trigger: CCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGG...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGTTTGATCTCCGGGCTTaGACCACTGGCCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQFDLRA*TTGHLQ
Trigger: CTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAA...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTCAAACTGCAAGCCGATaGTGTAGGTCTCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSQTASR*CRSLHP
Trigger: GGGGTGGAGAGACCTACACCATCGGCTTGCAGTTTG...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCGGCACCACCGTCCAGTaGGCCACATCCCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSGTTVQ*ATSLLE
Trigger: TTCCAGGAGGGATGTGGCCCACTGGACGGTGGTGCC...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGATCCCACATGCGTAGATaGCAGCACCAGAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRSHMRR*QHQSQT
Trigger: GGTCTGGCTCTGGTGCTGCCATCTACGCATGTGGGA...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCAAGCTCAAGTCTCTCCCACGTTaGCCAAAGTCAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: STHHHVVLLVFSCHDLKLKSLPR*PKSGAA
Trigger: GGCTGCACCTGACTTTGGCCAACGTGGGAGAGACTT...GAGCTTGAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CATGTCTCCACTCACCACCATGTTGTCCTGCTCGTATTCAGTTGCCACGACCTCCCACAGTCCTGGACGTaGAGTGAAGTCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HVSTHHHVVLLVFSCHDLPQSWT*SEVQGF
Trigger: AAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGG...GAGGTCGTGGCAACTGAATACGAGCAGGACAACATGGTGGTGAGTGGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CATCCTCAGAGCTTTTCAGGAGTGGAACCTCTGACAGGCTGTGCCCGTGTCTTCAGACACAAATGCCACTaGCAGGGTTCCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPQSFSGVEPLTGCARVFRHKCH*QGSHFS
Trigger: GGAGAAGTGGGAACCCTGCCAGTGGCATTTGTGTCT...GAAGACACGGGCACAGCCTGTCAGAGGTTCCACTCCTGAAAAGCTCTGAGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATGTCCGTCCAGCCACTTaGGGACACACTGGAATGCCG +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYVRPAT*GHTGMP
Trigger: CGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGAC...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGACCACAGCCACGATATaGGGGTGGTTTAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGTTATI*GWFRDV
Trigger: CACATCCCTAAACCACCCTCATATCGTGGCTGTGGT...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCCTGCTGAAGCTAGCTaGGCGCGTCAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSPAEAS*ARQGHI
Trigger: GATGTGGCCTTGACGCGCTCAGCTAGCTTCAGCAGG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCACTCCATCGTTTGAGATaGCCCGAGATCTGGACGGTG +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSLHRLR*PEIWTV
Trigger: CACCGTCCAGATCTCGGGTCATCTCAAACGATGGAG...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATGCTGGACTTCCAAGGTaGCACGGCGTCCATGCCCTT +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYAGLPR*HGVHAL
Trigger: AAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGC...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTCCTGGGGATGAGAGGTaGAAGCTCTCACTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSPGDER*KLSLSS
Trigger: TGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGG...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGATCCTCACCCACTCTCTaGCTAGGCGCAAACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRSSPTL*LGANCK
Trigger: CTTGCAGTTTGCGCCTAGTCAGAGAGTGGGTGAGGA...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGAGGACACACTGGAATaGCGTGGATTCCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSEDTLE*RGFLPR
Trigger: CCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTC...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATACCAGTACAACGACCTaGGGCCTCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYTSTTT*GLCTKP
Trigger: GGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGT...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGGACCATGTGCATGCATaGCAGGTTGGACAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQDHVHA*QVGQRG
Trigger: ACCTCTCTGTCCAACCTGGCATGCATGCACATGGTC...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTGTACCCGACTCCACCTaGTTCACCTCTTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCVPDST*FTSSEL
Trigger: GAGCTCTGAAGAGGTGAAGCAGGTGGAGTCGGGTAC...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR GCA 90 bp CTCAAGCCCTCACTGGTAGATGACCTTCACGCAAAATGCCTCTTCGTTTTTGTCTTGGCCAAAGTCAGGTaGAGCCGGCCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: LKPSLVDDLHAKCLFVFVLAKVR*SRPFTT
Trigger: GGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAA...GACAAAAACGAAGAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGACATGGCCAGCTGCCCTaGAGAGAAGCTCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRHGQLP*REALEL
Trigger: AAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGCCATG...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp CACCTGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTACTGCATACGATCACTaGATAGACATCGATGATTCC +
Preference number: 4 (lower is better)
Translates to: HLSHPPQSWTWSEVQGFATAYDH*IDIDDS
Trigger: GGAATCATCGATGTCTATGCAGTGATCGTATGCAGT...AGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGACGTGTCTTCTCACCATaGCTCTTCCTCGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRRVFSP*LFLAPS
Trigger: TGATGGGGCGAGGAAGAGGCATGGTGAGAAGACACG...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAACCTCTGACAGGCTGTaGCCGTGTCTTCTCACCATG +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSTSDRL*PCLLTM
Trigger: CATGGTGAGAAGACACGGGCACAGCCTGTCAGAGGT...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGACACACTGGAATGCCGTaGATTCCTTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRHTGMP*IPSKAG
Trigger: GCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTG...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCCCGTGATGGGCTTCTaGAGGCGAGGCTTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSPVMGF*RRGFRR
Trigger: TCTCCGAAAGCCTCGCCTCCAGAAGCCCATCACGGG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCGGAACCCAGGCCTGCTaGGTGTCAGCAGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSGTQAC*VSAAAK
Trigger: CTTAGCTGCTGCTGACACCCAGCAGGCCTGGGTTCC...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGTTCCAGAGGACCCTCGGGAGGTTCAGTGAGCTTGTCACTGGCCCTACAGGGTTTTTCTACAAAGTCATaGTGCTGGGCCGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: RSRGPSGGSVSLSLALQGFSTKS*CWAEKK
Trigger: TTTCTTCTCGGCCCAGCACCATGACTTTGTAGAAAA...ACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCCCGAGGGTCCTCTGGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCACAAGCACGTTTTGGGTaGAGATCCTGTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSQARFG*RSCASR
Trigger: ACGACTGGCACAGGATCTTCACCCAAAACGTGCTTG...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAACCACAGCCACGATATaGGGGTGGTTTAGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSTTATI*GWFRDV
Trigger: CACATCCCTAAACCACCCTCATATCGTGGCTGTGGT...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAGGCTGCAGTTCTCAATaGGGGTCATGTGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPGCSSQ*GSCVCF
Trigger: AAAACAGACACATGACCCTCATTGAGAACTGCAGCC...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATCCCTGGTCCCACAGGTaGGTTCTGCGGGGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDPWSHR*VLRGSE
Trigger: CTCGCTGCCCCGCAGAACTCACCTGTGGGACCAGGG...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCAGCCAGGTGGGCACTaGAGTGAAAGGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSQPGGH*SERLQR
Trigger: TCTCTGCAGCCTTTCACTTCAGTGCCCACCTGGCTG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGAACACGTACTCCAGCTaGAAGATGACCGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSNTYSS*KMTANA
Trigger: TGCATTTGCGGTCATCTTCCAGCTGGAGTACGTGTT...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGCGGCTGGCTGTTTATTaGCATCCAGAATCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQRLAVY*HPESRE
Trigger: TTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCG...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGAGATCTGGACGGTGGCAATGTGCTACAACCTCTCACTTTCTGTTCACACGGGCGGCTGGCTGTTTATTaGCATCCAGAATCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RDLDGGNVLQPLTFCSHGRLAVY*HPESRE
Trigger: TTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCG...CCCGTGTGAACAGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCAGATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CCA 90 bp CTCGTCTACACTGCATACGATCACTGCATAGACATCGATGATTCCGGAACCTCAGTTCCTCGGCAGTCCTaGGCCACTCTGCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LVYTAYDHCIDIDDSGTSVPRQS*ATLLKA
Trigger: TGCCTTTAGCAGAGTGGCCCAGGACTGCCGAGGAAC...TGAGGTTCCGGAATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp CGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCGATGATTGGCGTCGTTGCGGGTaGGAAGCGGTAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: RFATLVYTAYDHCIDIDDWRRCG*EAVELE
Trigger: TTCCAGTTCTACCGCTTCCCACCCGCAACGACGCCA...ATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAGCACGAAGACACCTTTaGGGTCTGTCTTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRARRHL*GLSSAP
Trigger: AGGAGCTGAAGACAGACCCCAAAGGTGTCTTCGTGC...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCAAGTGGTCCTGGACGTaGAGCTCCAGCAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSKWSWT*SSSSSS
Trigger: GGAAGAGCTGCTGGAGCTCCACGTCCAGGACCACTT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCTCCCACATGCGTAGATaGCAGCACCAGAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSSHMRR*QHQSQT
Trigger: GGTCTGGCTCTGGTGCTGCCATCTACGCATGTGGGA...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCGATGATCACCCACCACAGTCCTaGACGTGGAGTGAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RFATLVYTAYDHCIDIDDHPPQS*TWSEVQ
Trigger: CTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTG...ATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCATGGCATTCAACCTCTaGCAGTACCTCCAGCACGCC +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSMAFNL*QYLQHA
Trigger: GGCGTGCTGGAGGTACTGTCAGAGGTTGAATGCCAT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTAGAAGTGCCGGTAGGTaGCATCAAAGAAAGACACTC +
Preference number: 4 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSRSAGR*HQRKTL
Trigger: GAGTGTCTTTCTTTGATGTCACCTACCGGCACTTCT...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAAGTCCGGCTGGTTGCTaGAGATCCGAAGAATTCCAA +
Preference number: 4 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRSPAGC*RSEEFQ
Trigger: TTGGAATTCTTCGGATCTTCAGCAACCAGCCGGACT...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCTCCATCGTTTGAGATaGCCCGAGATCTGGACGGTG +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSLHRLR*PEIWTV
Trigger: CACCGTCCAGATCTCGGGTCATCTCAAACGATGGAG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCGCTGGCTCCATCGTTTaGGATGACCCGAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSAGSIV*DDPRSG
Trigger: TCCAGATCTCGGGTCATCTCAAACGATGGAGCCAGC...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCGTCCGCCAGCTTCTGTaGTTGCACCACGTGTTTTCG +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSVRQLL*LHHVFS
Trigger: CGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGAC...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS-3UTR GCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATCCAACATGCAGGTCCTaGACCCCACGAGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDPTCRS*TPRGGS
Trigger: GCTGCCGCCTCGTGGGGTGCAGGACCTGCATGTTGG...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAGACCTTCACGCAAAATaGCTCTTCGTTTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPDLHAK*LFVFVL
Trigger: GAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTC...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CGTGTGCTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCACTTGAGGACACACTaGAATGCCGTGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RVLCVVGVLKHKLKELGDHLRTH*NAVDSF
Trigger: GAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTG...GTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAGCACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTATAGGAGAGTCCGGCTaGTTGCTGAAGATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCIGESG*LLKIRR
Trigger: TCTTCGGATCTTCAGCAACCAGCCGGACTCTCCTAT...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGTGGCCGACCATCTCTaGGAGGCGGAGGCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDVADHL*EAEAAS
Trigger: AGAAGCCGCCTCCGCCTCCCAGAGATGGTCGGCCAC...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCACGGCTGGCTGTTTATTaGCATCCAGAATCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSRLAVY*HPESRE
Trigger: TTCCCGAGATTCTGGATGCCAATAAACAGCCAGCCG...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCAACATCCAAGGCTCTaGCTGTTCCTTTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSQHPRL*LFLCRG
Trigger: CCCCCTGCAAAGGAACAGCCAGAGCCTTGGATGTTG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
3UTR CAA 72 bp TTCCTTTGCAGGGGGATTGGAGCTGGCCTTTCACACTaGGGGCCTCCATCAGAATTTCATCCTCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: FLCRGIGAGLSH*GPPSEFHPQSF
Trigger: AAAGCTCTGAGGATGAAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCATCCAGGTGTTCTTCTaGGCCCAGCGAGAACTGGAA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSIQVFF*AQRELE
Trigger: TTCCAGTTCTCGCTGGGCTCAGAAGAACACCTGGAT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGTCTGATTCTTCCTTCTaGGGGTTAAACGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQSDSSF*GLNVTG
Trigger: ACCTGTGACGTTTAACCCTCAGAAGGAAGAATCAGA...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp CTGTGTGTTGTGGGGGTTCTTAAGCACAAACTCAAAGAACTCGGCGACCCCCAGTCTGATTCTTCCTTCTaGGGGTTAAACGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LCVVGVLKHKLKELGDPQSDSSF*GLNVTG
Trigger: ACCTGTGACGTTTAACCCTCAGAAGGAAGAATCAGA...CTGGGGGTCGCCGAGTTCTTTGAGTTTGTGCTTAAGAACCCCCACAACACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATCGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDRQQIR*AAGSLR
Trigger: ACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCG...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGAAGGAGTCCTCTCTaGACCGCAGCAGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDGRSPL*TAAAPG
Trigger: ACCCGGAGCTGCTGCGGTTCAGAGAGGACTCCTTCC...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATTCTCGAGGGCTGCCCTaGAGAGCTCCTGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDSRGLP*RAPGLG
Trigger: ACCCAGACCAGGAGCTCTGCAGGGCAGCCCTCGAGA...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCCAAAGGTGCCATCTCTaGTCACAGGCACGAGGATGT +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSQRCHL*SQARGC
Trigger: ACATCCTCGTGCCTGTGAGCAGAGATGGCACCTTTG...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGACCTTCACGCAAAATaGCTCTTCGTTTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQDLHAK*LFVFVL
Trigger: GAGGACAAAAACGAAGAGGCATTTTGCGTGAAGGTC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp GCTTTGCTCAGGCCCTCTAACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCCACACTCGTCTACACTaGATACGATCACTGCATAGA +
Preference number: 4 (lower is better)
Translates to: ALLRPSNEQSRGTIFYKVHTRLH*IRSLHR
Trigger: TCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTG...GACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGGGCCTGAGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR GCA 90 bp GACAAAGAAGTCTTTGATCTCCGGGCTTGGACCACTGGCCACCTTCAGAAATATGTCCGCCAGCTTCTGTaGTTGCACCACGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DKEVFDLRAWTTGHLQKYVRQLL*LHHVFS
Trigger: TGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGAC...ATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGTGTGCTGTGTGTTGTaGGGGTTCTTAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSVCCVL*GFLSTN
Trigger: GTTTGTGCTTAAGAACCCCCACAACACACAGCACAC...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp CTCAAGCCCTCACTGGTAGATGACCTTCACGCAAAATGCCTCTTCGTTTTTGTCCACTTGAGGACACACTaGAATGCCGTGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LKPSLVDDLHAKCLFVFVHLRTH*NAVDSF
Trigger: GAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTG...GACAAAAACGAAGAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCATAGGAGAGTCCGGCTaGTTGCTGAAGATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSIGESG*LLKIRR
Trigger: TCTTCGGATCTTCAGCAACCAGCCGGACTCTCCTAT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATAGGCTGCCACGCAGGTaGAACATGTCCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDRLPRR*NMSSST
Trigger: GGTGGAGGAGGACATGTTCCACCTGCGTGGCAGCCT...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATTCCTGGAAGTGGTCCTaGACGTGGAGCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDSWKWS*TWSSSS
Trigger: GCTGCTGGAGCTCCACGTCCAGGACCACTTCCAGGA...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATACTCCAGCTGGAAGATaGCCGCAAATGCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDTPAGR*PQMQGG
Trigger: GCCACCCTGCATTTGCGGTCATCTTCCAGCTGGAGT...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGGCATGCAAAGGCGTaGACGGCAGCTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDGHAKA*TAAPVT
Trigger: AGTTACAGGAGCTGCCGTTCACGCCTTTGCATGCCC...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATTTGAGCTTCCAGTCGTaGGGAGGCTGCCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDLSFQS*GGCLQR
Trigger: TCTCTGGAGGCAGCCTCCTCACGACTGGAAGCTCAA...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTAGCACCATCTCGTTaGTTTGTAGACAATCTGATT +
Preference number: 4 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQVAPSR*FVDNLI
Trigger: AATCAGATTGTCTACAAAGCAACGAGATGGTGCTAC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCTGGACGGTGGCAATGTaGTACAACCTCTCACTTTCT +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSWTVAM*YNLSLS
Trigger: AGAAAGTGAGAGGTTGTAGCACATTGCCACCGTCCA...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATCTTGGCTCCCGGAGCTaGTCTTGGAAGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDLGSRS*SWKRRP
Trigger: TGGTCTCCTCTTCCAAGACCAGCTCCGGGAGCCAAG...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATTCTCCACCCCCGACCTaGAAGGAGTCCTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDSPPPT*KESSLN
Trigger: GTTCAGAGAGGACTCCTTCCAGGTCGGGGGTGGAGA...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCTGTCCTCATGGTCATTaGTGTAGATCAGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSCPHGH*CRSGSP
Trigger: AGGAGATCCTGATCTACATCAATGACCATGAGGACA...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR TCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATTTCAGCTCCTGGGGATaGGAGGTGAAAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDFSSWG*EVKALT
Trigger: AGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAA...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR GCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATACCCAGCATCAAAGGTaGCATCTCTGCTCACAGGCA +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDTQHQR*HLCSQA
Trigger: TGCCTGTGAGCAGAGATGGCACCTTTGATGCTGGGT...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGGACAAGCACGTTTTaGGTGAAGATCCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDGTSTF*VKILCQ
Trigger: CTGGCACAGGATCTTCACCCAAAACGTGCTTGTCCC...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATCCGAGATCTGGACGGTaGCAATGTGCTACAACCTCT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDPRSGR*QCATTS
Trigger: AGAGGTTGTAGCACATTGCCACCGTCCAGATCTCGG...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATCCGGGCTTGGACCACTaGCCACCTTCAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDPGLDH*PPSEIC
Trigger: ACATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGG...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CCA 90 bp AAACACATTTTCACCAAACCCAGGTCTTCCTCTCCAAACCAGGTCTTTCTTTCCAAAGACACTCGCAGATaGCATTCAACCTCTGACAGT +
Preference number: 4 (lower is better)
Translates to: KHIFTKPRSSSPNQVFLSKDTRR*HSTSDS
Trigger: ACTGTCAGAGGTTGAATGCCATCTGCGAGTGTCTTT...GGAAAGAAAGACCTGGTTTGGAGAGGAAGACCTGGGTTTGGTGAAAATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR GCA 90 bp CGCTTTGCCACACTCGTCTACACTGCATACGATCACTGCATAGACATCGATGATTTGTGTTTTCAATTCTaGCCTGAAAAATCCCAAACG +
Preference number: 4 (lower is better)
Translates to: RFATLVYTAYDHCIDIDDLCFQF*PEKSQT
Trigger: CGTTTGGGATTTTTCAGGGCAGAATTGAAAACACAA...ATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS CCA 90 bp CGGCGGCCGGTGCTCAACGGAGCCACAAGCCTGAGGACCGAGGACTaGCCGAGGGGCGCGCCCCGTCCGCTGCCACCCGCGGGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: RRPVLNGATSLRTED*PRGAPRPLPPAGGA
Trigger: GGCTCCTCCCGCGGGTGGCAGCGGACGGGGCGCGCCCCTCGGCCAGTCCTCGGTCCTCAGGCTTGTGGCTCCGTTGAGCACCGGCCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS TCA 90 bp CGGACCCAGAGGCCCGGCGGCCGGTGCTCAACGGAGCCACAAGCCTaGGGACCGAGGACTGGCCGAGGGGCGCGCCCCGTCCGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RTQRPGGRCSTEPQA*GPRTGRGARPVRCH
Trigger: GTGGCAGCGGACGGGGCGCGCCCCTCGGCCAGTCCTCGGTCCTCAGGCTTGTGGCTCCGTTGAGCACCGGCCGCCGGGCCTCTGGGTCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS GCA 90 bp ACCAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCCCGGCCTCCTaGAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: TNTLVPRRPKSPPAS*RRTDLIRSSLRLRV
Trigger: CACCCGCAGGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGACGTCCTGGGGCCCCTaGCCCTGCCGGGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQTSWGP*PCRAWV
Trigger: GACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGT...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQGRRST*GPLTGS
Trigger: GGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAACGTCCTGGGGCCCCTaGCCCTGCCGGGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPTSWGP*PCRAWV
Trigger: GACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGT...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGGTCATGTGTCTGTTTaGCTCTGCGGGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRGHVSV*LCGVLE
Trigger: CTCCAGGACCCCGCAGAGCAAAACAGACACATGACC...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTGACC +
Preference number: 5 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALHSRPA*AEEMLT
Trigger: GGTCAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTG...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp ACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCTCCAGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: TTEWTPMGLTRPNPSMSPGRRST*GPLTGS
Trigger: GGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCC...TGGAGACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGCAGTCGTGGCGTCGTaGCGGGTGGGAAGCGGTAGA +
Preference number: 5 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQAVVAS*RVGSGR
Trigger: TCTACCGCTTCCCACCCGCAACGACGCCACGACTGC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQHSRPA*AEEMLH
Trigger: ATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTG...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ACAGACAGGCCCCAGCTGGGTGCCGCAGGAAGGACGTCACCCTCAAGCCCTCACTGGACGCCGATGGGCTaGACGCGGCCAAACCCCAGC +
Preference number: 5 (lower is better)
Translates to: TDRPQLGAAGRTSPSSPHWTPMG*TRPNPS
Trigger: GCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCA...GTGAGGGCTTGAGGGTGACGTCCTTCCTGCGGCACCCAGCTGGGGCCTGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS CCA 90 bp CCACGTCTGTGTGGGTGTCGCCAGCCAGCGATCCCTGCAGTGGGATaGGAGCCATCTGCACTTGTCCCGGAGGACTCAGCACCGGCCCAC +
Preference number: 5 (lower is better)
Translates to: PRLCGCRQPAIPAVG*EPSALVPEDSAPAH
Trigger: GTGGGCCGGTGCTGAGTCCTCCGGGACAAGTGCAGATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGACGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp CTCCTGGGCGCCTGCAGCCCAATCAGCCAGGGGAGCCCAAGGTCATaGGTGGTTCCGGGGCGGCCAAATCTGAGGCCACAACCAACCCTG +
Preference number: 5 (lower is better)
Translates to: LLGACSPISQGSPRS*VVPGRPNLRPQPTL
Trigger: CAGGGTTGGTTGTGGCCTCAGATTTGGCCGCCCCGGAACCACCCATGACCTTGGGCTCCCCTGGCTGATTGGGCTGCAGGCGCCCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp GCGGGTCAGAGCACAGCCTCTCAGGATGTGCAAGCAAGGGGCTCCTaGGCGCCTGCAGCCCAATCAGCCAGGGGAGCCCAAGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: AGQSTASQDVQARGS*APAAQSARGAQGHG
Trigger: CCCATGACCTTGGGCTCCCCTGGCTGATTGGGCTGCAGGCGCCCAGGAGCCCCTTGCTTGCACATCCTGAGAGGCTGTGCTCTGACCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS-3UTR CAA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAGCAGTCGTGGCGTCGTaGCGGGTGGGAAGCGGTAGA +
Preference number: 5 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPAVVAS*RVGSGR
Trigger: TCTACCGCTTCCCACCCGCAACGACGCCACGACTGC...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp AGCTTACGCCTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGGAGAAGCTCTGGAACTaGAAGGGGACGTGGGCGGTC +
Preference number: 5 (lower is better)
Translates to: SLRLRVASDSRLTSWGPLEKLWN*KGTWAV
Trigger: GACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTC...CAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAGGCGTAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp AGGCGGGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: RRVSWPATQETSTRCREWSMPFS*LNPGEA
Trigger: GGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGA...CCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS GCA 90 bp ACCAGTACAACGACCTGCGGCCTCTGCACGAAGCCCAGACCATTGTaGACGCCCACACGCAGGCGCCGCTCCAGGATCTCCAGGGCACCA +
Preference number: 5 (lower is better)
Translates to: TSTTTCGLCTKPRPL*TPTRRRRSRISRAP
Trigger: TGGTGCCCTGGAGATCCTGGAGCGGCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 90 bp CTGCAGCAGCAGGTCTCCACCAGGAGGGGACCGCTAAGCAAGGTCTaGGCCGGCACCCACACAGGGCACCCAAGCAGCCACACTGCCATT +
Preference number: 5 (lower is better)
Translates to: LQQQVSTRRGPLSKV*AGTHTGHPSSHTAI
Trigger: AATGGCAGTGTGGCTGCTTGGGTGCCCTGTGTGGGTGCCGGCCCAGACCTTGCTTAGCGGTCCCCTCCTGGTGGAGACCTGCTGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 90 bp CCACCACGTGGGGCTGCAGCTCCACAGTCAGGCAGAGCACGGCGATaGGCTTGCCACCACTCGCTCGGAACAAGACCTGTGAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PPRGAAAPQSGRARR*ACHHSLGTRPVRRP
Trigger: TGGCCTCCTCACAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGCAGCCCCACGTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 90 bp ACCTGCCACGTCTGTGTGGGTGTCGCCAGCCAGCGATCCCTGCAGTaGGATGGGAGCCATCTGCACTTGTCCCGGAGGACTCAGCACCGG +
Preference number: 5 (lower is better)
Translates to: TCHVCVGVASQRSLQ*DGSHLHLSRRTQHR
Trigger: CCGGTGCTGAGTCCTCCGGGACAAGTGCAGATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGACGTGGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp CATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTaGGTGTCGCCAGCCAGCGATCCCTGCAGTGGGATGGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: HPRAAGSGGRPATSV*VSPASDPCSGMGAI
Trigger: GATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS-3UTR CAA 90 bp GTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGCATGGAGGGACAAGCACGTTTaGGGTGAAGATCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: VASDSRLTSWGPLPCRAWRDKHV*GEDPVP
Trigger: TGGCACAGGATCTTCACCCAAAACGTGCTTGTCCCT...CCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCCTCCCATCCCGTTTCTaGCCCTCAGCGACCACTTCC +
Preference number: 5 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSLPSRF*PSATTS
Trigger: GGAAGTGGTCGCTGAGGGCAAGAAACGGGATGGGAG...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGACGAAGCCCAGACCATaGTGCACGCCCACACGCAGG +
Preference number: 5 (lower is better)
Translates to: TTTEFALTEPRPAGCQQQTKPRP*CTPTRR
Trigger: CCTGCGTGTGGGCGTGCACAATGGTCTGGGCTTCGT...CTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCCACTGACGAAGCCCAGACCATaGTGCACGCCCACACGCAGG +
Preference number: 5 (lower is better)
Translates to: EGDVGGFLEGRRSTLGPLTKPRP*CTPTRR
Trigger: CCTGCGTGTGGGCGTGCACAATGGTCTGGGCTTCGT...CAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp CTTCACCACCGAGTGGACGCCGATGGGCTTGACGCGGCCAAACCCCAGCATGTCAGACAGTGCGAGGGGTaGGGCTGGATCCCACCCTGC +
Preference number: 5 (lower is better)
Translates to: LHHRVDADGLDAAKPQHVRQCEG*GWIPPC
Trigger: GCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTCT...GACATGCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCACTCGGTGGTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGACAGTGCGAGGGGTaGGGCTGGATCCCACCCTGC +
Preference number: 5 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGRQCEG*GWIPPC
Trigger: GCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTCT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGGCAGTCGTGGCGTCGTaGCGGGTGGGAAGCGGTAGA +
Preference number: 5 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVAVVAS*RVGSGR
Trigger: TCTACCGCTTCCCACCCGCAACGACGCCACGACTGC...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGGCGGAGGAGCCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: HDLKLVGGLHSRPALAEEPARIQ*PRPQAR
Trigger: ACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGG...CTCCTCCGCCAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000466897.1
CDS-3UTR CAA 90 bp GTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGGCATGGACCGTGTGCTGTGTGTaGTGGGGGTTCTTAAGCACA +
Preference number: 5 (lower is better)
Translates to: VASDSRLTSWGPLPCRAWTVCCV*WGFLST
Trigger: TGTGCTTAAGAACCCCCACAACACACAGCACACGGT...CCATGCCCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCGAGAAGCTCTGGAACTaGAAGGGGACGTGGGCGGTC +
Preference number: 5 (lower is better)
Translates to: PPPRSSRSRNPGLLGVSSEKLWN*KGTWAV
Trigger: GACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTC...GCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSSMPFS*LNPGEA
Trigger: GGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGA...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCAGCTCAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: ELRVIEAEDLVHHVGLQLSTAMG*PPLARN
Trigger: GTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCT...GAGCTGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GGCAGCCCTGCTGAGTTTACAACACGCTCGTCCCGCGCCGGCCCAAGTCTCCCCTTGAGCACCAACGCCTaGCTGGCAGGGAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: GSPAEFTTRSSRAGPSLPLSTNA*LAGRLS
Trigger: ACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAA...GGGGAGACTTGGGCCGGCGCGGGACGAGCGTGTTGTAAACTCAGCAGGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 90 bp TGCACGTGCCCCTCCAAGGTGCCTTCCCTAGACCCCTGCGGGCCCTaGACTCGCAGCAGAATCCCGCCTCACAAAGCGAAGGCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: CTCPSKVPSLDPCGP*TRSRIPPHKAKARK
Trigger: CTTTCGGGCCTTCGCTTTGTGAGGCGGGATTCTGCTGCGAGTTCAGGGCCCGCAGGGGTCTAGGGAAGGCACCTTGGAGGGGCACGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp GGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAGCCAGCGATCCCTaGAGTGGGATGGGAGCCATCTGCACTTGTCCCGGAGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: GRPATSVWVSPASDP*SGMGAICTCPGGLS
Trigger: GCTGAGTCCTCCGGGACAAGTGCAGATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGACGTGGCAGGTCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp CTTCAAGAGCGAGAGAGGCGGGTCAGAGCACAGCCTCTCAGGATGTaGAAGCAAGGGGCTCCTGGGCGCCTGCAGCCCAATCAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: LQERERRVRAQPLRM*KQGAPGRLQPNQPG
Trigger: CCCTGGCTGATTGGGCTGCAGGCGCCCAGGAGCCCCTTGCTTGCACATCCTGAGAGGCTGTGCTCTGACCCGCCTCTCTCGCTCTTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp GTGCAGCAGGACAGCCGTGCTGACTTCCCCCTCGGCCCAGGTCCCTaGTACATCCCCATAAAGACGCAGCCTCCATGTCGCCCACATGCC +
Preference number: 5 (lower is better)
Translates to: VQQDSRADFPLGPGP*YIPIKTQPPCRPHA
Trigger: GGCATGTGGGCGACATGGAGGCTGCGTCTTTATGGGGATGTAGCAGGGACCTGGGCCGAGGGGGAAGTCAGCACGGCTGTCCTGCTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp TCCCGACACCCTGTGTGCATGTGCGCAAGTCAGGCCAGGAGGTCCTaGAGTGGGTGGTGGCAGGGCCAAGTTCGCGGTCAAGCACGTCAG +
Preference number: 5 (lower is better)
Translates to: SRHPVCMCASQARRS*SGWWQGQVRGQARQ
Trigger: CTGACGTGCTTGACCGCGAACTTGGCCCTGCCACCACCCACTCCAGGACCTCCTGGCCTGACTTGCGCACATGCACACAGGGTGTCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 90 bp AACACTCATGCACCCGGCCCTGCTGGGTCAGAACACTGTATCCAGTaGTCCGAGTCACAGGGCCGAGGTGGGGGTCCTGCAGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: NTHAPGPAGSEHCIQ*SESQGRGGGPAVPW
Trigger: CCAGGGCACTGCAGGACCCCCACCTCGGCCCTGTGACTCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 90 bp AGCCCTAGGGGAGGGAGGGACTTCCACACTGGCCAGGTCCCTCCTTaGCTGCAGCAGATCCACCTGCTGCGCCAGGTTCCTTCCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPRGGRDFHTGQVPP*LQQIHLLRQVPSPL
Trigger: AAGAGGGGAAGGAACCTGGCGCAGCAGGTGGATCTGCTGCAGCCAAGGAGGGACCTGGCCAGTGTGGAAGTCCCTCCCTCCCCTAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp CCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGGGTCATGTGTCTGTTTaGCTCTGCGGGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PTTTEFALTEPRPAGCQQGHVSV*LCGVLE
Trigger: CTCCAGGACCCCGCAGAGCAAAACAGACACATGACC...CTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp AACTCTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: NSRRGRGWFPGRPPLHFGHSRPA*AEEMLH
Trigger: ATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTG...CCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTTGGACGCCGATGGGCTaGACGCGGCCAAACCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFWTPMG*TRPNPS
Trigger: GCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCA...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAACGCTGAGCTCGGGGTaGTCGATCTCCACAGTCACC +
Preference number: 5 (lower is better)
Translates to: HHHGVRAHGTQACWVSAATLSSG*SISTVT
Trigger: GGTGACTGTGGAGATCGACAACCCCGAGCTCAGCGT...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp TGCCCTGCCGGGCATGGGTCAGTAGCATGGCAGCCAGCTCACTGTCCACGTCCGCCGCCAGCTGGGAAATaGACAACCCTGGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: CPAGHGSVAWQPAHCPRPPPAGK*TTLVPQ
Trigger: CTGTGGGACCAGGGTTGTCAATTTCCCAGCTGGCGG...CGGACGTGGACAGTGAGCTGGCTGCCATGCTACTGACCCATGCCCGGCAGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 90 bp GAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAAGACCTGTaGGGAGGCCACGCTGAGTGTTGGGATGGGCACGAGGCTTGTGAG +
Preference number: 5 (lower is better)
Translates to: EHGDGLATTRSEQDL*GGHAECWDGHEACE
Trigger: CTCACAAGCCTCGTGCCCATCCCAACACTCAGCGTGGCCTCCTCACAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 90 bp GTGGTTCCGGGGCGGCCAAATCTGAGGCCACAACCAACCCTGACATaGCTGTGGCCGCGACTTGGGTCCACACCAGGCAAGTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: VVPGRPNLRPQPTLT*LWPRLGSTPGKSLL
Trigger: GAGGAGGGACTTGCCTGGTGTGGACCCAAGTCGCGGCCACAGTCATGTCAGGGTTGGTTGTGGCCTCAGATTTGGCCGCCCCGGAACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp CTGACAAGGCAGGGGAGCCCTGCGGGTGCATCCAAGGCCTGCCTTTaGCTTCAGCGCCCGGTACAAGGATGGGAACCAGTGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LTRQGSPAGASKACL*LQRPVQGWEPVLSQ
Trigger: CTGGCTGAGCACTGGTTCCCATCCTTGTACCGGGCGCTGAAGTCAAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTGCCTTGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp CGCCTGCTCACCTGTGCTGAGAATTCGGCCCTCAAGGCCAGGTTCTaGCGGCCACGCTCACAGCCGTCACTGCGAAGGATGGGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: RLLTCAENSALKARF*RPRSQPSLRRMGRL
Trigger: CAGCCTTCCCATCCTTCGCAGTGACGGCTGTGAGCGTGGCCGTCAGAACCTGGCCTTGAGGGCCGAATTCTCAGCACAGGTGAGCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp GAGCGCGTCAAGGCCACATCCATCTCAGGCACCAGTACAACGACCTaGGGCCTCTGCACGAAGCCCAGACCATTGTGCACGCCCACACGC +
Preference number: 5 (lower is better)
Translates to: ERVKATSISGTSTTT*GLCTKPRPLCTPTR
Trigger: GCGTGTGGGCGTGCACAATGGTCTGGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGTGCCTGAGATGGATGTGGCCTTGACGCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS GCA 90 bp CCCCATAAAGACGCAGCCTCCATGTCGCCCACATGCCCTACACTGTaGTTCTGCCTTCGGGCTACCAACCGCCTCCTGGCACCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: PHKDAASMSPTCPTL*FCLRATNRLLAPAA
Trigger: CGCTGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATGTGGGCGACATGGAGGCTGCGTCTTTATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp CCCCTCTTGCCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCCCAGTaGTGGGAGCACGCCCACGTGCAGGCACCTGTGGAGGTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: PLLPVRSCCFQGRAQ*WEHAHVQAPVEVSH
Trigger: ATGGCTCACCTCCACAGGTGCCTGCACGTGGGCGTGCTCCCAGCACTGGGCTCGTCCTTGAAAACAGCAGCTTCTGACGGGCAAGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp TCCAAGCACTGTGTTCCCTGCATGGACACCGCCCATCCAGCCCACTaGGGCTCGGCTGCAGCCATCTCCACAGGGAATAATCGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SKHCVPCMDTAHPAH*GSAAAISTGNNRGG
Trigger: GCCCCCTCGATTATTCCCTGTGGAGATGGCTGCAGCCGAGCCGCAGTGGGCTGGATGGGCGGTGTCCATGCAGGGAACACAGTGCTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS CCA 90 bp GGGAGGGGAAAGGGGCCGGGTCATTTAGCCTGGAGGAGAGAGGGATaGGCATTTCCACCACAGTCCTGCCTCTCCGCAGGAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: GRGKGPGHLAWRREG*AFPPQSCLSAGGTT
Trigger: TGTGGTCCCTCCTGCGGAGAGGCAGGACTGTGGTGGAAATGCCCATCCCTCTCTCCTCCAGGCTAAATGACCCGGCCCCTTTCCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp CCCACGGCACACTCTCCTGCAAGGATGGGACCCACAACCTCGGTGTaGCCTTTACTTCCCCAAGGGGCGAGGCAGAGCACCGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: PTAHSPARMGPTTSV*PLLPQGARQSTANE
Trigger: TTCGTTGGCGGTGCTCTGCCTCGCCCCTTGGGGAAGTAAAGGCCACACCGAGGTTGTGGGTCCCATCCTTGCAGGAGAGTGTGCCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp CTGGGTCTCACAGATGACGTTCGGGTCGCTGCAGCGAACATGGACTaGGGGGTCCTCACCAAGCATTCCCACCGGAGCACCTGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LGLTDDVRVAAANMD*GVLTKHSHRSTWSR
Trigger: CCTGCTCCAGGTGCTCCGGTGGGAATGCTTGGTGAGGACCCCCCAGTCCATGTTCGCTGCAGCGACCCGAACGTCATCTGTGAGACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS-3UTR CAA 90 bp CCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTCTCAAAACCAGAGCTaGGCTCCCGGAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PPRSSRSRNPGLLGVSSSSQNQS*APGAGL
Trigger: AAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAGA...GCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACGCTGAGCTCGGGGTaGTCGATCTCCACAGTCACC +
Preference number: 5 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGTLSSG*SISTVT
Trigger: GGTGACTGTGGAGATCGACAACCCCGAGCTCAGCGT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRSMPFS*LNPGEA
Trigger: GGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGA...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GCACCAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGGCTCGGAACAAGACCTaGGCGTGTTTAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: APEPDPPPRSSRSRNPGLARNKT*ACLVGT
Trigger: AGTGCCCACTAAACACGCCAAGGTCTTGTTCCGAGC...CAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp TCTGCATCCACCTTTGAGCACCAACGCCTTGCTGGCAGGGAGGCTGAGTGGCAGAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: SASTFEHQRLAGREAEWQSTAMG*PPLARN
Trigger: GTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCT...CTGCCACTCAGCCTCCCTGCCAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CAA 90 bp GTTGGCCAAAGTCAGGTGCAGCCGGCCCTTCACCACCGAGTGGACGCCGATGGGGAAGTCTCTCCCACGTaGGCCAAAGTCAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: VGQSQVQPALHHRVDADGEVSPT*AKVRCS
Trigger: GCTGCACCTGACTTTGGCCAACGTGGGAGAGACTTC...CCCATCGGCGTCCACTCGGTGGTGAAGGGCCGGCTGCACCTGACTTTGGCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp CTTGGCGGAGGAGATGCTGACCCTTCCCTTGTGGGTCTGGGGGCTTCCGGTCGCGTGAAGTCCAGGGCTTaGCTCAGGCCCTCTAACGAG +
Preference number: 5 (lower is better)
Translates to: LGGGDADPSLVGLGASGRVKSRA*LRPSNE
Trigger: CTCGTTAGAGGGCCTGAGCAAAGCCCTGGACTTCAC...GCGACCGGAAGCCCCCAGACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp CTTGGCGGAGGAGATGCTGACCCTTCCCTTGTGGGTCTGGGGGCTTCCGGTCGCGGAGGTTCAGTGAGCTaGTCACTGGCCCTACAGGGT +
Preference number: 5 (lower is better)
Translates to: LGGGDADPSLVGLGASGRGGSVS*SLALQG
Trigger: ACCCTGTAGGGCCAGTGACAAGCTCACTGAACCTCC...GCGACCGGAAGCCCCCAGACCCACAAGGGAAGGGTCAGCATCTCCTCCGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS TCA 90 bp CTCACTCTGGGCAGCTGTAGGGTCAAGCCGCCTGCTCACCTGTGCTaGGAATTCGGCCCTCAAGGCCAGGTTCTGACGGCCACGCTCACA +
Preference number: 5 (lower is better)
Translates to: LTLGSCRVKPPAHLC*EFGPQGQVLTATLT
Trigger: TGTGAGCGTGGCCGTCAGAACCTGGCCTTGAGGGCCGAATTCTCAGCACAGGTGAGCAGGCGGCTTGACCCTACAGCTGCCCAGAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp CCGGGAGAGACACAGCACAGGAGCAAACACTCATGCACCCGGCCCTaGTGGGTCAGAACACTGTATCCAGTGGTCCGAGTCACAGGGCCG +
Preference number: 5 (lower is better)
Translates to: PGETQHRSKHSCTRP*WVRTLYPVVRVTGP
Trigger: CGGCCCTGTGACTCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTTTGCTCCTGTGCTGTGTCTCTCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 90 bp AAAGACGCAGCCTCCATGTCGCCCACATGCCCTACACTGTGCTTCTaGCTTCGGGCTACCAACCGCCTCCTGGCACCTGCAGCGTCCACT +
Preference number: 5 (lower is better)
Translates to: KDAASMSPTCPTLCF*LRATNRLLAPAAST
Trigger: AGTGGACGCTGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATGTGGGCGACATGGAGGCTGCGTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp CGCCTCTTGTTCTTTCTCCTTGACCTCGACGTCAGCACCATGCTGTaGAGCAGGACAGCCGTGCTGACTTCCCCCTCGGCCCAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: RLLFFLLDLDVSTML*SRTAVLTSPSAQVP
Trigger: AGGGACCTGGGCCGAGGGGGAAGTCAGCACGGCTGTCCTGCTGCACAGCATGGTGCTGACGTCGAGGTCAAGGAGAAAGAACAAGAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp CTGAGTGTCCTGGGGGAAGCCGTGCTTGCCCACGGCACACTCTCCTaGAAGGATGGGACCCACAACCTCGGTGTGGCCTTTACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LSVLGEAVLAHGTLS*KDGTHNLGVAFTSP
Trigger: TGGGGAAGTAAAGGCCACACCGAGGTTGTGGGTCCCATCCTTGCAGGAGAGTGTGCCGTGGGCAAGCACGGCTTCCCCCAGGACACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp CATGCCCTACACTGTGCTTCTGCCTTCGGGCTACCAACCGCCTCCTaGCACCTGCAGCGTCCACTCAGTCCTCACTCCAAGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HALHCASAFGLPTAS*HLQRPLSPHSKPAS
Trigger: GGAAGCTGGCTTGGAGTGAGGACTGAGTGGACGCTGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp CGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGCTCCCGGAGCTGGTCTaGGAAGAGGAGACCACTTTC +
Preference number: 5 (lower is better)
Translates to: RRRHPRAAGSGGRPATSVLPELV*EEETTF
Trigger: GAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGAG...CACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTGTGACCGAAGCTGCATaGCCGTCCACTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFVTEAA*PSTPAG
Trigger: CCCTGCAGGAGTGGACGGCAATGCAGCTTCGGTCAC...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCAGCTTGCATGCATGCCAGGTaGGACAGAGAGGTGACCGAA +
Preference number: 5 (lower is better)
Translates to: HHGVRAHGTQACWVSAAACMHAR*DREVTE
Trigger: TTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCA...AGCTGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACCGCCAGCTTCTGTGCTaGCACCACGTGTTTTCGCCT +
Preference number: 5 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHRQLLC*HHVFSP
Trigger: AGGCGAAAACACGTGGTGCAAGCACAGAAGCTGGCG...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp CTGCGGGTGGCATCCGACTCGCGGCTGACGTCCTGGGGCCCCTTGCCCTGCCGGAATGCCTCTTCGTTTTaGTCCTCATGGTCATTGATG +
Preference number: 5 (lower is better)
Translates to: LRVASDSRLTSWGPLPCRNASSF*SSWSLM
Trigger: CATCAATGACCATGAGGACAAAAACGAAGAGGCATT...CCGGCAGGGCAAGGGGCCCCAGGACGTCAGCCGCGAGTCGGATGCCACCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGCGTCTGCATCCACCTTaGAGCACCAACGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSRLHPP*STNALL
Trigger: CAGCAAGGCGTTGGTGCTCAAAGGTGGATGCAGACG...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CAA 90 bp CACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGGTGTCAGCAGCATCCTTTGCAGGGGGATaGGAGCTGGCCTTTCACACT +
Preference number: 5 (lower is better)
Translates to: HHHGVRAHGTQACWVSAASFAGG*ELAFHT
Trigger: AGTGTGAAAGGCCAGCTCCAATCCCCCTGCAAAGGA...TGCTGCTGACACCCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS-3UTR CAA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCAGCTCTGGCTGTTCCTTaGCAGGGGGATTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPALAVP*QGDWSW
Trigger: CCAGCTCCAATCCCCCTGCAAAGGAACAGCCAGAGC...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 90 bp GGCCACTCACGGGAACAGCCACTGGCCCTTCCTCCAAGTATTCCCTaGGTCTCCTGTGCACCGTGCACGGGGACCCCCACAGAGATAAGA +
Preference number: 5 (lower is better)
Translates to: GHSREQPLALPPSIP*VSCAPCTGTPTEIR
Trigger: TCTTATCTCTGTGGGGGTCCCCGTGCACGGTGCACAGGAGACTCAGGGAATACTTGGAGGAAGGGCCAGTGGCTGTTCCCGTGAGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 90 bp TTGACCTCGACGTCAGCACCATGCTGTGCAGCAGGACAGCCGTGCTaGCTTCCCCCTCGGCCCAGGTCCCTGCTACATCCCCATAAAGAC +
Preference number: 5 (lower is better)
Translates to: LTSTSAPCCAAGQPC*LPPRPRSLLHPHKD
Trigger: GTCTTTATGGGGATGTAGCAGGGACCTGGGCCGAGGGGGAAGTCAGCACGGCTGTCCTGCTGCACAGCATGGTGCTGACGTCGAGGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 90 bp ACGGCCGGTGGGTGTGGCACCCTACAAACTTGCAACTTGCAAACCTaGGTGTCCTGGGGGAAGCCGTGCTTGCCCACGGCACACTCTCCT +
Preference number: 5 (lower is better)
Translates to: TAGGCGTLQTCNLQT*VSWGKPCLPTAHSP
Trigger: AGGAGAGTGTGCCGTGGGCAAGCACGGCTTCCCCCAGGACACTCAGGTTTGCAAGTTGCAAGTTTGTAGGGTGCCACACCCACCGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp CTGCCTAATTACCGGTCCGTCCAGCCACTTGAGGACACACTGGAATaGCGTGGATTCCTTCCAAGGCTGGCGCGCTCTCTGTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LPNYRSVQPLEDTLE*RGFLPRLARSLWVG
Trigger: CCCCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGACCGGTAATTAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS GCA 90 bp CATCTAACGAAAGGCAACTGCCGAGAGGCCTCTGGTAACAGCGTCTaGGCGCTGGAGGCGCTGGAAAAGCTGCTGTCAGGGCCACCCACT +
Preference number: 5 (lower is better)
Translates to: HLTKGNCREASGNSV*ALEALEKLLSGPPT
Trigger: AGTGGGTGGCCCTGACAGCAGCTTTTCCAGCGCCTCCAGCGCGCAGACGCTGTTACCAGAGGCCTCTCGGCAGTTGCCTTTCGTTAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp TACACTGTGCTTCTGCCTTCGGGCTACCAACCGCCTCCTGGCACCTaGAGCGTCCACTCAGTCCTCACTCCAAGCCAGCTTCCTGGGAAC +
Preference number: 5 (lower is better)
Translates to: YTVLLPSGYQPPPGT*SVHSVLTPSQLPGN
Trigger: GTTCCCAGGAAGCTGGCTTGGAGTGAGGACTGAGTGGACGCTGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp TTGGCTGCAGCAGATCCACCTGCTGCGCCAGGTTCCTTCCCCTCTTaGCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCCCAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LAAADPPAAPGSFPS*PSEAAVFKDEPSAG
Trigger: CCCAGCACTGGGCTCGTCCTTGAAAACAGCAGCTTCTGACGGGCAAGAGGGGAAGGAACCTGGCGCAGCAGGTGGATCTGCTGCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp GCACAAGCAGGTCAGGAAGCAACACCATTAGGCGACCAGCACCTGTaGTTAGAGACACCACTGCCACCCAGCTGGGAGCCACCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AQAGQEATPLGDQHL*LETPLPPSWEPPAS
Trigger: GGAGGCTGGTGGCTCCCAGCTGGGTGGCAGTGGTGTCTCTAAGCACAGGTGCTGGTCGCCTAATGGTGTTGCTTCCTGACCTGCTTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 90 bp CTGCGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTaGTCAACCCAGGAGAGGCCTGCAGGAACCGAACAGCACAAGCAG +
Preference number: 5 (lower is better)
Translates to: LRWTSKVTRRPCPSR*STQERPAGTEQHKQ
Trigger: CTGCTTGTGCTGTTCGGTTCCTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS CCA 90 bp ACGCCCTGCCTAATTACCGGTCCGTCCAGCCACTTGAGGACACACTaGAATGCCGTGGATTCCTTCCAAGGCTGGCGCGCTCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TPCLITGPSSHLRTH*NAVDSFQGWRALCG
Trigger: CCCACAGAGAGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGACCGGTAATTAGGCAGGGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CCA 90 bp GGAGAGACACAGCACAGGAGCAAACACTCATGCACCCGGCCCTGCTaGGTCAGAACACTGTATCCAGTGGTCCGAGTCACAGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GETQHRSKHSCTRPC*VRTLYPVVRVTGPR
Trigger: CCTCGGCCCTGTGACTCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTTTGCTCCTGTGCTGTGTCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 90 bp TCCCTGGCTCAGCGCCATCCCTGGAGGCAGCTTGAAAGCTCACTCTaGGCAGCTGTAGGGTCAAGCCGCCTGCTCACCTGTGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: SLAQRHPWRQLESSL*AAVGSSRLLTCAEN
Trigger: ATTCTCAGCACAGGTGAGCAGGCGGCTTGACCCTACAGCTGCCCAGAGTGAGCTTTCAAGCTGCCTCCAGGGATGGCGCTGAGCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp CTCTTGCCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCCCAGTGCTaGGAGCACGCCCACGTGCAGGCACCTGTGGAGGTGAGCCATATC +
Preference number: 5 (lower is better)
Translates to: LLPVRSCCFQGRAQC*EHAHVQAPVEVSHI
Trigger: GATATGGCTCACCTCCACAGGTGCCTGCACGTGGGCGTGCTCCCAGCACTGGGCTCGTCCTTGAAAACAGCAGCTTCTGACGGGCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp CTGCACAGCCGGCCGGCCTTGGCGGAGGAGATGCTTCATCTGGACGGCAGCAGAAGGGACAAGCACGTTTaGGGTGAAGATCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LHSRPALAEEMLHLDGSRRDKHV*GEDPVP
Trigger: TGGCACAGGATCTTCACCCAAAACGTGCTTGTCCCT...TCTGCTGCCGTCCAGATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTTCTCCCATCCCGTTTCTaGCCCTCAGCGACCACTTCC +
Preference number: 5 (lower is better)
Translates to: GSQLTVHVRQLLCLHHVFLPSRF*PSATTS
Trigger: GGAAGTGGTCGCTGAGGGCAAGAAACGGGATGGGAG...AAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCCAGGAGAGTCCGGCTGGTaGCTGAAGATCCGAAGAATT +
Preference number: 5 (lower is better)
Translates to: PRAAGSGGRPATSVWVSPGESGW*LKIRRI
Trigger: AATTCTTCGGATCTTCAGCAACCAGCCGGACTCTCC...TGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAAGGGGCCTCACTCTCAAAACCAGAGCTaGGCTCCCGGAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: HVHQVEMDKAAAGPKGPHSQNQS*APGAGL
Trigger: AAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAGA...GTGAGGCCCCTTAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: PALGLCFLSQVHRSARWAPARIQ*PRPQAR
Trigger: ACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGG...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGCCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: ALGLCFLSQVHRSARWALPARIQ*PRPQAR
Trigger: ACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGG...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CCCTCTAACGAGCAATCCCGGGGCACCATTTTCTACAAAGTCATGGTGCTGGGCTGGACGCCGATGGGCTaGACGCGGCCAAACCCCAGC +
Preference number: 5 (lower is better)
Translates to: PSNEQSRGTIFYKVMVLGWTPMG*TRPNPS
Trigger: GCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCA...GCCCAGCACCATGACTTTGTAGAAAATGGTGCCCCGGGATTGCTCGTTAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp TGGTGGCAATCCACGTCCACCAGGTTGAGATGGACAAAGCGGCTGCCGGCCCTAACGCTGAGCTCGGGGTaGTCGATCTCCACAGTCACC +
Preference number: 5 (lower is better)
Translates to: WWQSTSTRLRWTKRLPALTLSSG*SISTVT
Trigger: GGTGACTGTGGAGATCGACAACCCCGAGCTCAGCGT...TAGGGCCGGCAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGATTGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTCTGGGAGAAGCTCTGGAACTaGAAGGGGACGTGGGCGGTC +
Preference number: 5 (lower is better)
Translates to: PLATFRNMSRGSPGPTFWEKLWN*KGTWAV
Trigger: GACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTC...CCAGAATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp ATCCACGCGCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTGGGTGTCGCGCTCGGAACAAGACCTaGGCGTGTTTAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: IHALQGVEVDLPRLCGCRARNKT*ACLVGT
Trigger: AGTGCCCACTAAACACGCCAAGGTCTTGTTCCGAGC...GCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGCGCGTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTGCCACCACTCGCTCGGAACAGCTCGGAACAAGACCTaGGCGTGTTTAGTGGGCACT +
Preference number: 5 (lower is better)
Translates to: APQSGRARRWACHHSLGTARNKT*ACLVGT
Trigger: AGTGCCCACTAAACACGCCAAGGTCTTGTTCCGAGC...TGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp AGGAGAGCTCCGGGTGATAGAAGCGGAAGACCTGGTCCACCACGTGGGGCTGCATCCACGTCCACCAGGTaGAGATGGACAAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RRAPGDRSGRPGPPRGAASTSTR*RWTKRL
Trigger: CAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGA...TGCAGCCCCACGTGGTGGACCAGGTCTTCCGCTTCTATCACCCGGAGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS TCA 90 bp CTCACACGGCGACTATTCCCTAAGCGCTGCCTCCGCAGACAGAACTaGAGCCATCTTGGGCTTAAAACCCCGGCCAGCTGGTGGCACCAG +
Preference number: 5 (lower is better)
Translates to: LTRRLFPKRCLRRQN*SHLGLKTPASWWHQ
Trigger: CTGGTGCCACCAGCTGGCCGGGGTTTTAAGCCCAAGATGGCTTCAGTTCTGTCTGCGGAGGCAGCGCTTAGGGAATAGTCGCCGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp AGTCAAAACTACTCCTGCCATGATCCCACCTCCCGACACCCTGTGTaGATGTGCGCAAGTCAGGCCAGGAGGTCCTGGAGTGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SQNYSCHDPTSRHPV*MCASQARRSWSGWW
Trigger: CCACCACCCACTCCAGGACCTCCTGGCCTGACTTGCGCACATGCACACAGGGTGTCGGGAGGTGGGATCATGGCAGGAGTAGTTTTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 90 bp GTGTACGTCACTCACCCCACAATGGCACATCTAACGAAAGGCAACTaGCGAGAGGCCTCTGGTAACAGCGTCTGCGCGCTGGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VYVTHPTMAHLTKGN*REASGNSVCALEAL
Trigger: CAGCGCCTCCAGCGCGCAGACGCTGTTACCAGAGGCCTCTCGGCAGTTGCCTTTCGTTAGATGTGCCATTGTGGGGTGAGTGACGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp GGAACAGCCACTGGCCCTTCCTCCAAGTATTCCCTGAGTCTCCTGTaGACCGTGCACGGGGACCCCCACAGAGATAAGACAGACGCTCTC +
Preference number: 5 (lower is better)
Translates to: GTATGPSSKYSLSLL*TVHGDPHRDKTDAL
Trigger: GAGAGCGTCTGTCTTATCTCTGTGGGGGTCCCCGTGCACGGTGCACAGGAGACTCAGGGAATACTTGGAGGAAGGGCCAGTGGCTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 90 bp CAACATGATCTCAAAGGCCTGTGGAGGGAGGGGACAGGGAGACGCTaGGGCCACTCACGGGAACAGCCACTGGCCCTTCCTCCAAGTATT +
Preference number: 5 (lower is better)
Translates to: QHDLKGLWREGTGRR*GHSREQPLALPPSI
Trigger: AATACTTGGAGGAAGGGCCAGTGGCTGTTCCCGTGAGTGGCCGCAGCGTCTCCCTGTCCCCTCCCTCCACAGGCCTTTGAGATCATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 90 bp TCCCTGCTACATCCCCATAAAGACGCAGCCTCCATGTCGCCCACATaGCCTACACTGTGCTTCTGCCTTCGGGCTACCAACCGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SLLHPHKDAASMSPT*PTLCFCLRATNRLL
Trigger: CAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATGTGGGCGACATGGAGGCTGCGTCTTTATGGGGATGTAGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp CACTGGCACGTTGGCCGCCTCCTACTGTCTGCGCACGAGCACAAATaGAGAATTCCCTGGCTCAGCGCCATCCCTGGAGGCAGCTTGAAA +
Preference number: 5 (lower is better)
Translates to: HWHVGRLLLSAHEHK*RIPWLSAIPGGSLK
Trigger: TTTCAAGCTGCCTCCAGGGATGGCGCTGAGCCAGGGAATTCTGCATTTGTGCTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp GCAACTATGGCAAAGGCACTGGCACGTTGGCCGCCTCCTACTGTCTaGGCACGAGCACAAATGCAGAATTCCCTGGCTCAGCGCCATCCC +
Preference number: 5 (lower is better)
Translates to: ATMAKALARWPPPTV*ARAQMQNSLAQRHP
Trigger: GGGATGGCGCTGAGCCAGGGAATTCTGCATTTGTGCTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTGCCTTTGCCATAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp TGGAATGCCGTGGATTCCTTCCAAGGCTGGCGCGCTCTCTGTGGGTaGGGAGGGACAAGCACGTTTTGGGTGAAGATCCTGTGCCAGTCG +
Preference number: 5 (lower is better)
Translates to: WNAVDSFQGWRALCG*GGTSTFWVKILCQS
Trigger: CGACTGGCACAGGATCTTCACCCAAAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CCA 90 bp AGCCACTTGAGGACACACTGGAATGCCGTGGATTCCTTCCAAGGCTaGCGCGCTCTCTGTGGGTGGGGAGGGACAAGCACGTTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: SHLRTHWNAVDSFQG*RALCGWGGTSTFWV
Trigger: CACCCAAAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CCA 90 bp AGCCTGCTGCTTCACAGTCAAATGGGGCTGGGTGAGGCATCTTCATaGGCTCACGAGGAAGCCACTCTGAGACGTGGTCACGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SLLLHSQMGLGEASS*AHEEATLRRGHVAP
Trigger: AGGGGCCACGTGACCACGTCTCAGAGTGGCTTCCTCGTGAGCCCATGAAGATGCCTCACCCAGCCCCATTTGACTGTGAAGCAGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp ATAGGACAGGACAGGCTCGTCACAGGTGCTCAGCAAGACACCTGCTaGGGAAACGGACGCCGCCACCTTTCCCAGGACAGCATCCAAGCA +
Preference number: 5 (lower is better)
Translates to: IGQDRLVTGAQQDTC*GNGRRHLSQDSIQA
Trigger: TGCTTGGATGCTGTCCTGGGAAAGGTGGCGGCGTCCGTTTCCCCAGCAGGTGTCTTGCTGAGCACCTGTGACGAGCCTGTCCTGTCCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS-3UTR CAA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAGGGACAAGCACGTTTaGGGTGAAGATCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGRDKHV*GEDPVP
Trigger: TGGCACAGGATCTTCACCCAAAACGTGCTTGTCCCT...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTATACAGCCGCAACCTTTaGTCCTGGGAAGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: GQLACDAGDIHALQGVEVYSRNL*SWEAEI
Trigger: TATCTCTGCTTCCCAGGACAAAAGGTTGCGGCTGTA...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGAGACAGTGCGAGGGGTaGGGCTGGATCCCACCCTGC +
Preference number: 5 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSRQCEG*GWIPPC
Trigger: GCAGGGTGGGATCCAGCCCAACCCCTCGCACTGTCT...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCC +
Preference number: 5 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRGRRST*GPLTGS
Trigger: GGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCC...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCAACCGTGTGCTGTGTGTaGTGGGGGTTCTTAAGCACA +
Preference number: 5 (lower is better)
Translates to: PALGLCFLSQVHRSARWATVCCV*WGFLST
Trigger: TGTGCTTAAGAACCCCCACAACACACAGCACACGGT...TGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp AGTCTCCCCCGGCCTCCTGCAGGCGCACAGACCTCATCCGCTCCAGCTTACGCCATGACAAAGAAGTCTTaGATCTCCGGGCTTGGACCA +
Preference number: 5 (lower is better)
Translates to: SLPRPPAGAQTSSAPAYAMTKKS*ISGLGP
Trigger: TGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTCAT...GGCGTAAGCTGGAGCGGATGAGGTCTGTGCGCCTGCAGGAGGCCGGGGGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GGCTTGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCAAGCACGAAGACACCTTaGGGGTCTGTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GLDHWPPSEICPVVPRGPSTKTP*GSVFSS
Trigger: GGAGCTGAAGACAGACCCCAAAGGTGTCTTCGTGCT...TGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTATGATCTCAAAGGCCTaGGAGATGAGCGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVMISKA*EMSGWR
Trigger: CCGCCAGCCGCTCATCTCCAAGGCCTTTGAGATCAT...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGGCTGGCCTTTCACACTaGGGGCCTCCATCAGAATTT +
Preference number: 5 (lower is better)
Translates to: ALGLCFLSQVHRSARWALAGLSH*GPPSEF
Trigger: AAATTCTGATGGAGGCCCCAAGTGTGAAAGGCCAGC...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 90 bp CACCAGCAACCTCTCTGCATGGTCGTGTTTATTTCCAAGGGGAGCTaGCAAGGCAGGGGAGCCCTGCGGGTGCATCCAAGGCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: HQQPLCMVVFISKGS*QGRGALRVHPRPAF
Trigger: AAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTGCCTTGTCAGCTCCCCTTGGAAATAAACACGACCATGCAGAGAGGTTGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp TGCACAGTGACTCAGTCTGCATGGAGATCCCAGGACAGTGACAGCTaGACAAACCCTTACCAACACGCTCGTCCCGCGCCGGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: CTVTQSAWRSQDSDS*TNPYQHARPAPAQV
Trigger: GACTTGGGCCGGCGCGGGACGAGCGTGTTGGTAAGGGTTTGTTCAGCTGTCACTGTCCTGGGATCTCCATGCAGACTGAGTCACTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 90 bp CAGGCAGCAACCATCACCAACCGGCCTCACTGTGCCAGAGAAGGCTaGGGCTGCCAGGAACAAAGGGAACAGCAGATCCCAGGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: QAATITNRPHCAREG*GCQEQREQQIPGGN
Trigger: GTTTCCACCTGGGATCTGCTGTTCCCTTTGTTCCTGGCAGCCTCAGCCTTCTCTGGCACAGTGAGGCCGGTTGGTGATGGTTGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 90 bp TGGAGCTTCCATCCGGGAGAGACACAGCACAGGAGCAAACACTCATaGACCCGGCCCTGCTGGGTCAGAACACTGTATCCAGTGGTCCGA +
Preference number: 5 (lower is better)
Translates to: WSFHPGETQHRSKHS*TRPCWVRTLYPVVR
Trigger: TCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTTTGCTCCTGTGCTGTGTCTCTCCCGGATGGAAGCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 90 bp TGTTTATTTCCAAGGGGAGCTGACAAGGCAGGGGAGCCCTGCGGGTaGATCCAAGGCCTGCCTTTGACTTCAGCGCCCGGTACAAGGATG +
Preference number: 5 (lower is better)
Translates to: CLFPRGADKAGEPCG*IQGLPLTSAPGTRM
Trigger: CATCCTTGTACCGGGCGCTGAAGTCAAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTGCCTTGTCAGCTCCCCTTGGAAATAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 90 bp ACTATAGGACAGGACAGGCTCGTCACAGGTGCTCAGCAAGACACCTaGTGGGGAAACGGACGCCGCCACCTTTCCCAGGACAGCATCCAA +
Preference number: 5 (lower is better)
Translates to: TIGQDRLVTGAQQDT*WGNGRRHLSQDSIQ
Trigger: TTGGATGCTGTCCTGGGAAAGGTGGCGGCGTCCGTTTCCCCAGCAGGTGTCTTGCTGAGCACCTGTGACGAGCCTGTCCTGTCCTATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS GCA 90 bp GCCCCACACATTACACACTATAGGACAGGACAGGCTCGTCACAGGTaGTCAGCAAGACACCTGCTGGGGAAACGGACGCCGCCACCTTTC +
Preference number: 5 (lower is better)
Translates to: APHITHYRTGQARHR*SARHLLGKRTPPPF
Trigger: GAAAGGTGGCGGCGTCCGTTTCCCCAGCAGGTGTCTTGCTGAGCACCTGTGACGAGCCTGTCCTGTCCTATAGTGTGTAATGTGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS CCA 90 bp ACACTGGAATGCCGTGGATTCCTTCCAAGGCTGGCGCGCTCTCTGTaGGTGGGGAGGGACAAGCACGTTTTGGGTGAAGATCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: TLECRGFLPRLARSL*VGRDKHVLGEDPVP
Trigger: TGGCACAGGATCTTCACCCAAAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CCA 90 bp TGGCACCTGCAGCGTCCACTCAGTCCTCACTCCAAGCCAGCTTCCTaGGAACGAGCACCTAGAACAAGGGCTATTTCGGTCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: WHLQRPLSPHSKPAS*ERAPRTRAISVLSL
Trigger: CAGGGAGAGGACCGAAATAGCCCTTGTTCTAGGTGCTCGTTCCCAGGAAGCTGGCTTGGAGTGAGGACTGAGTGGACGCTGCAGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp TGCGCACGAGCACAAATGCAGAATTCCCTGGCTCAGCGCCATCCCTaGAGGCAGCTTGAAAGCTCACTCTGGGCAGCTGTAGGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: CARAQMQNSLAQRHP*RQLESSLWAAVGSS
Trigger: GCTTGACCCTACAGCTGCCCAGAGTGAGCTTTCAAGCTGCCTCCAGGGATGGCGCTGAGCCAGGGAATTCTGCATTTGTGCTCGTGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp GCAAGCAAGTGGTGTGGCCTCGGGACAAGCGTGTCTCACGGCCGGTaGGTGTGGCACCCTACAAACTTGCAACTTGCAAACCTGAGTGTC +
Preference number: 5 (lower is better)
Translates to: ASKWCGLGTSVSHGR*VWHPTNLQLANLSV
Trigger: GACACTCAGGTTTGCAAGTTGCAAGTTTGTAGGGTGCCACACCCACCGGCCGTGAGACACGCTTGTCCCGAGGCCACACCACTTGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp ACCAGAGTTGTGTTCATAACAGAAGGCTTTGGCAAGCAAGTGGTGTaGCCTCGGGACAAGCGTGTCTCACGGCCGGTGGGTGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: TRVVFITEGFGKQVV*PRDKRVSRPVGVAP
Trigger: GGGTGCCACACCCACCGGCCGTGAGACACGCTTGTCCCGAGGCCACACCACTTGCTTGCCAAAGCCTTCTGTTATGAACACAACTCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp ACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCTACAGCCGCAACCTTTaGTCCTGGGAAGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: TSARSLLPQPSAQVSQVGYSRNL*SWEAEI
Trigger: TATCTCTGCTTCCCAGGACAAAAGGTTGCGGCTGTA...GCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTGACCGAAGCTGCATaGCCGTCCACTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSVTEAA*PSTPAG
Trigger: CCCTGCAGGAGTGGACGGCAATGCAGCTTCGGTCAC...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACGTCCTGGGGCCCCTaGCCCTGCCGGGCATGGGTC +
Preference number: 5 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSTSWGP*PCRAWV
Trigger: GACCCATGCCCGGCAGGGCAAGGGGCCCCAGGACGT...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAAC +
Preference number: 5 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSSTAMG*PPLARN
Trigger: GTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCT...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GGTCAGCTGGCCTGCGACGCAGGAGACATCCACGCGCTGCAGGGAGTGGAGGTAATGACAAAGAAGTCTTaGATCTCCGGGCTTGGACCA +
Preference number: 5 (lower is better)
Translates to: GQLACDAGDIHALQGVEVMTKKS*ISGLGP
Trigger: TGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTCAT...TACCTCCACTCCCTGCAGCGCGTGGATGTCTCCTGCGTCGCAGGCCAGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp TTCAGTTGCCACGACCTCAAGCTCGTGGGAGGCCTGCACAGCCGGCCGGCCTTGTTAGGAACACTTCCCTaGTCTGTCCTCCATCATGAG +
Preference number: 5 (lower is better)
Translates to: FSCHDLKLVGGLHSRPALLGTLP*SVLHHE
Trigger: CTCATGATGGAGGACAGACAAGGGAAGTGTTCCTAA...CAAGGCCGGCCGGCTGTGCAGGCCTCCCACGAGCTTGAGGTCGTGGCAACTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp GCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGTCAGCCAGGTGGGCACTGCGCCAGCTTCTGTGCTaGCACCACGTGTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: ALGLCFLSQVHRSARWALRQLLC*HHVFSF
Trigger: AAATGAAAACACGTGGTGCAAGCACAGAAGCTGGCG...CAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 90 bp CCAGTGGAGAAGGTCTGCAGTCCCAAGTCAAAACTACTCCTGCCATaGTCCCACCTCCCGACACCCTGTGTGCATGTGCGCAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: PVEKVCSPKSKLLLP*SHLPTPCVHVRKSG
Trigger: GCCTGACTTGCGCACATGCACACAGGGTGTCGGGAGGTGGGATCATGGCAGGAGTAGTTTTGACTTGGGACTGCAGACCTTCTCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 90 bp AAGGATGTGCACAGTGACTCAGTCTGCATGGAGATCCCAGGACAGTaGCAGCTGAACAAACCCTTACCAACACGCTCGTCCCGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: KDVHSDSVCMEIPGQ*QLNKPLPTRSSRAG
Trigger: GCCGGCGCGGGACGAGCGTGTTGGTAAGGGTTTGTTCAGCTGTCACTGTCCTGGGATCTCCATGCAGACTGAGTCACTGTGCACATCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp AACTTCTCCAGGGAGGGGTACAGGGTGAAGAATAAGTCATCCAAGTaGCCCGTGATGGGCTTCTGGAGGCGAGGCTTTCGGAGAGCGTCG +
Preference number: 5 (lower is better)
Translates to: NFSREGYRVKNKSSK*PVMGFWRRGFRRAS
Trigger: CGACGCTCTCCGAAAGCCTCGCCTCCAGAAGCCCATCACGGGGCACTTGGATGACTTATTCTTCACCCTGTACCCCTCCCTGGAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS GCA 90 bp CACACTGACTCTCCAGGCAGCAACCATCACCAACCGGCCTCACTGTaGCAGAGAAGGCTGAGGCTGCCAGGAACAAAGGGAACAGCAGAT +
Preference number: 5 (lower is better)
Translates to: HTDSPGSNHHQPASL*QRRLRLPGTKGTAD
Trigger: ATCTGCTGTTCCCTTTGTTCCTGGCAGCCTCAGCCTTCTCTGGCACAGTGAGGCCGGTTGGTGATGGTTGCTGCCTGGAGAGTCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 90 bp GACACGGCGTCCATGCCCTTCTCGTTGCTCAACCCAGGAGAGGCCTaGAGGAACCGAACAGCACAAGCAGGTCAGGAAGCAACACCATTA +
Preference number: 5 (lower is better)
Translates to: DTASMPFSLLNPGEA*RNRTAQAGQEATPL
Trigger: TAATGGTGTTGCTTCCTGACCTGCTTGTGCTGTTCGGTTCCTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS CCA 90 bp AAGGTTCTCAGGAAGAAGGTGGAACGCAGGCTCCAGGGCCGGGTGTaGCTTCAGCGTGTACTGCAGGCTGCAGTTCTCAATGAGGGTCAT +
Preference number: 5 (lower is better)
Translates to: KVLRKKVERRLQGRV*LQRVLQAAVLNEGH
Trigger: ATGACCCTCATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAGCCTGCGTTCCACCTTCTTCCTGAGAACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 90 bp AAATCTGAGGCCACAACCAACCCTGACATGACTGTGGCCGCGACTTaGGTCCACACCAGGCAAGTCCCTCCTCTCACACGGCGACTATTC +
Preference number: 5 (lower is better)
Translates to: KSEATTNPDMTVAAT*VHTRQVPPLTRRLF
Trigger: GAATAGTCGCCGTGTGAGAGGAGGGACTTGCCTGGTGTGGACCCAAGTCGCGGCCACAGTCATGTCAGGGTTGGTTGTGGCCTCAGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS-3UTR CAA 90 bp TGGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTGCTTGCACCACGTGTTGGAGAGTCCGGCTGGTaGCTGAAGATCCGAAGAATT +
Preference number: 5 (lower is better)
Translates to: WQPAHCPRPPASVLAPRVGESGW*LKIRRI
Trigger: AATTCTTCGGATCTTCAGCAACCAGCCGGACTCTCC...AACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CCGATGAGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCTGCACGTACAGCCGCAACCTTTaGTCCTGGGAAGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: PMSSRESPSQTSICRVCTYSRNL*SWEAEI
Trigger: TATCTCTGCTTCCCAGGACAAAAGGTTGCGGCTGTA...CGTGCAGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTTGCATGCATGCCAGGTaGGACAGAGAGGTGACCGAA +
Preference number: 5 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHICMHAR*DREVTE
Trigger: TTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCA...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGTGTAGCACCATCTCGTaGCTTTGTAGACAATCTGAT +
Preference number: 5 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWCSTIS*LCRQSD
Trigger: ATCAGATTGTCTACAAAGCAACGAGATGGTGCTACA...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CAATTCTGCCCTGAAAAATCCCAAACGTTCCAGAGGACCCTCGGGAGGTTCAGTGCAGTCGTGGCGTCGTaGCGGGTGGGAAGCGGTAGA +
Preference number: 5 (lower is better)
Translates to: QFCPEKSQTFQRTLGRFSAVVAS*RVGSGR
Trigger: TCTACCGCTTCCCACCCGCAACGACGCCACGACTGC...ACTGAACCTCCCGAGGGTCCTCTGGAACGTTTGGGATTTTTCAGGGCAGAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTCACAGCCGGCCGGCCTaGGCGGAGGAGATGCTTCAT +
Preference number: 5 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCHSRPA*AEEMLH
Trigger: ATGAAGCATCTCCTCCGCCAAGGCCGGCCGGCTGTG...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTAGCACGAAGACACCTTaGGGGTCTGTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHISTKTP*GSVFSS
Trigger: GGAGCTGAAGACAGACCCCAAAGGTGTCTTCGTGCT...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp GGCAGCTCCTGTAACTGTTCGGCAATGGATGTTTCCAGGACCAGGGAGGTCTGGTCCACGTCCACCAGGTaGAGATGGACAAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: GSSCNCSAMDVSRTREVWSTSTR*RWTKRL
Trigger: CAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGA...CCAGACCTCCCTGGTCCTGGAAACATCCATTGCCGAACAGTTACAGGAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378169.7
CDS-3UTR CAA 90 bp CAGAGCCAGACCCACCACCACGGAGTTCGCGCTCACGGAACCCAGGCCTGCTGGAATGCCTCTTCGTTTTaGTCCTCATGGTCATTGATG +
Preference number: 5 (lower is better)
Translates to: QSQTHHHGVRAHGTQACWNASSF*SSWSLM
Trigger: CATCAATGACCATGAGGACAAAAACGAAGAGGCATT...CCAGCAGGCCTGGGTTCCGTGAGCGCGAACTCCGTGGTGGTGGGTCTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS GCA 90 bp AGGCCTGCCTTTGACTTCAGCGCCCGGTACAAGGATGGGAACCAGTaGTCAGCCAGTGTGACGCGTTACTTGGACTCGAAGGCACACTTA +
Preference number: 5 (lower is better)
Translates to: RPAFDFSARYKDGNQ*SASVTRYLDSKAHL
Trigger: TAAGTGTGCCTTCGAGTCCAAGTAACGCGTCACACTGGCTGAGCACTGGTTCCCATCCTTGTACCGGGCGCTGAAGTCAAAGGCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp GCCCACCCAACTATGGGATGGTACCTGTCACCGCCCTGGGGCTTTTaGAAGACTGCTGGTGATTTGAGGAACTCGCTCCTAAATGCAGGC +
Preference number: 5 (lower is better)
Translates to: AHPTMGWYLSPPWGF*KTAGDLRNSLLNAG
Trigger: GCCTGCATTTAGGAGCGAGTTCCTCAAATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCCATAGTTGGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp TTGGTCATCTTGAGTGCTCTCTCCGGATCTCAGTCCAAGCCAGGCTaGCCTTCCTGCCACCTCCTGCAGACGAGCTGTTCTTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: LVILSALSGSQSKPG*PSCHLLQTSCSWSS
Trigger: AGATGACCAAGAACAGCTCGTCTGCAGGAGGTGGCAGGAAGGCCAGCCTGGCTTGGACTGAGATCCGGAGAGAGCACTCAAGATGACCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp TCTCCTTCCCTTGCAGATGAGCAGCCAACCAGACACAAATGCCACTaGCAGGGTTCCCACTTCTCCAAACAGCACAGTCGCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SPSLADEQPTRHKCH*QGSHFSKQHSRLQS
Trigger: GCTCTGCAGGCGACTGTGCTGTTTGGAGAAGTGGGAACCCTGCCAGTGGCATTTGTGTCTGGTTGGCTGCTCATCTGCAAGGGAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489180.6
ENST00000622020.4
CDS-3UTR CAA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTGTGACCGAAGCTGCATaGCCGTCCACTCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCVTEAA*PSTPAG
Trigger: CCCTGCAGGAGTGGACGGCAATGCAGCTTCGGTCAC...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp AAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCTGGACGCCGATGGGCTaGACGCGGCCAAACCCCAGC +
Preference number: 5 (lower is better)
Translates to: KYILSNSDNEGPTCVDGSWTPMG*TRPNPS
Trigger: GCTGGGGTTTGGCCGCGTCAAGCCCATCGGCGTCCA...GCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCATCCACGTCCACCAGGTaGAGATGGACAAAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: AGCRYYKMTSARSLLPQPSTSTR*RWTKRL
Trigger: CAGCCGCTTTGTCCATCTCAACCTGGTGGACGTGGA...TGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp CAATTCTGCCCTGAAAAATCCCAAACGTTCCAGAGGACCCTCGGGAGGTTCAGTATGCTGACCCTTCCCTaGTGGGTCTGGGGGCTTCCG +
Preference number: 5 (lower is better)
Translates to: QFCPEKSQTFQRTLGRFSMLTLP*WVWGLP
Trigger: CGGAAGCCCCCAGACCCACAAGGGAAGGGTCAGCAT...ACTGAACCTCCCGAGGGTCCTCTGGAACGTTTGGGATTTTTCAGGGCAGAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS TCA 90 bp GGGATGGTACCTGTCACCGCCCTGGGGCTTTTGGAAGACTGCTGGTaGTTTGAGGAACTCGCTCCTAAATGCAGGCTAACTGCCCTCCAT +
Preference number: 5 (lower is better)
Translates to: GMVPVTALGLLEDCW*FEELAPKCRLTALH
Trigger: ATGGAGGGCAGTTAGCCTGCATTTAGGAGCGAGTTCCTCAAATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp GGTCTTCATTCTCCTGCCGTGTCAGTGGCAGCCTCCGTTTCCTGGTaGCGAATGAAAGCGTGTGGCACTCACAGTTCGCTGCACATGGAT +
Preference number: 5 (lower is better)
Translates to: GLHSPAVSVAASVSW*RMKACGTHSSLHMD
Trigger: ATCCATGTGCAGCGAACTGTGAGTGCCACACGCTTTCATTCGTCACCAGGAAACGGAGGCTGCCACTGACACGGCAGGAGAATGAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp CCTGTTAGCATTTTAGGGCCAAGAGCCTGCTGCTTCACAGTCAAATaGGGCTGGGTGAGGCATCTTCATGGGCTCACGAGGAAGCCACTC +
Preference number: 5 (lower is better)
Translates to: PVSILGPRACCFTVK*GWVRHLHGLTRKPL
Trigger: GAGTGGCTTCCTCGTGAGCCCATGAAGATGCCTCACCCAGCCCCATTTGACTGTGAAGCAGCAGGCTCTTGGCCCTAAAATGCTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp ATACAACGGGCCCACCCAACTATGGGATGGTACCTGTCACCGCCCTaGGGCTTTTGGAAGACTGCTGGTGATTTGAGGAACTCGCTCCTA +
Preference number: 5 (lower is better)
Translates to: IQRAHPTMGWYLSPP*GFWKTAGDLRNSLL
Trigger: TAGGAGCGAGTTCCTCAAATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCCATAGTTGGGTGGGCCCGTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp TGGCACTCACAGTTCGCTGCACATGGATTCTTACTTCTGGATCTCTaGGTCGCAAGGCGGGCTGCCTCACAAACTCTAACCTCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: WHSQFAAHGFLLLDL*VARRAASQTLTSAS
Trigger: AGAGGCCGAGGTTAGAGTTTGTGAGGCAGCCCGCCTTGCGACCCAGAGATCCAGAAGTAAGAATCCATGTGCAGCGAACTGTGAGTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTCTCCCGGAGCTGGTCTaGGAAGAGGAGACCACTTTC +
Preference number: 5 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSLPELV*EEETTF
Trigger: GAAAGTGGTCTCCTCTTCCAAGACCAGCTCCGGGAG...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTCTCAAAACCAGAGCTaGGCTCCCGGAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ILLLTPFPSPAANMISKASQNQS*APGAGL
Trigger: AAGACCAGCTCCGGGAGCCAAGCTCTGGTTTTGAGA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp ATCCTCTTGTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTGCATGCATGCCAGGTaGGACAGAGAGGTGACCGAA +
Preference number: 5 (lower is better)
Translates to: ILLLTPFPSPAANMISKACMHAR*DREVTE
Trigger: TTCGGTCACCTCTCTGTCCAACCTGGCATGCATGCA...GGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAACAAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTCGCCAGCTTCTGTGCTaGCACCACGTGTTTTCGCCT +
Preference number: 5 (lower is better)
Translates to: QQQLSWMQVLQNDQRSVSRQLLC*HHVFSP
Trigger: AGGCGAAAACACGTGGTGCAAGCACAGAAGCTGGCG...AGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS-3UTR CAA 90 bp GGGTGTCAGCAGCAGCTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGAGCACGAAGACACCTTaGGGGTCTGTCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GCQQQLSWMQVLQNDQRSSTKTP*GSVFSS
Trigger: GGAGCTGAAGACAGACCCCAAAGGTGTCTTCGTGCT...CGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAGCTGCTGCTGACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GCCAGCTGCCCTGCAGAGAAGCTCTGGAACTTGAAGGGGACGTGGGCGGTCTCGAATGCCTCTTCGTTTTaGTCCTCATGGTCATTGATG +
Preference number: 5 (lower is better)
Translates to: ASCPAEKLWNLKGTWAVSNASSF*SSWSLM
Trigger: CATCAATGACCATGAGGACAAAAACGAAGAGGCATT...CGAGACCGCCCACGTCCCCTTCAAGTTCCAGAGCTTCTCTGCAGGGCAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCACCGCCAGCTGGGAAATaGACAACCCTGGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSPPAGK*TTLVPQ
Trigger: CTGTGGGACCAGGGTTGTCAATTTCCCAGCTGGCGG...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS TCA 90 bp CCATCCTCAGAAGCACTGCAGGAAATCTCCGAGCTCACACCAGTTTaGAAGGATTCTCACAGGGCTTGGGGATCCGACTTAGGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PSSEALQEISELTPV*KDSHRAWGSDLGGE
Trigger: CTCCCCTCCTAAGTCGGATCCCCAAGCCCTGTGAGAATCCTTTCAAACTGGTGTGAGCTCGGAGATTTCCTGCAGTGCTTCTGAGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp AGAAGATATGAGAAGTCTCCTTCATCTGGACGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCTGCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: RRYEKSPSSGRQQIR*AAGSLRPRRQSAGS
Trigger: AGACCCTGCAGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCGTCCAGATGAAGGAGACTTCTCATATCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS GCA 90 bp AAATGCCAGTGGAGAAGGTCTGCAGTCCCAAGTCAAAACTACTCCTaGCATGATCCCACCTCCCGACACCCTGTGTGCATGTGCGCAAGT +
Preference number: 5 (lower is better)
Translates to: KCQWRRSAVPSQNYS*HDPTSRHPVCMCAS
Trigger: ACTTGCGCACATGCACACAGGGTGTCGGGAGGTGGGATCATGGCAGGAGTAGTTTTGACTTGGGACTGCAGACCTTCTCCACTGGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 90 bp AACCTCGGCCTCTCGATGGCCACATTGATCAAGGATAGGCCTGTGTaGATTTACACGTGCAAATGTCTGGCTCCACACACACCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: NLGLSMATLIKDRPV*IYTCKCLAPHTPRV
Trigger: CACCCTGGGTGTGTGTGGAGCCAGACATTTGCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGAGAGGCCGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp TGCACATGGATTCTTACTTCTGGATCTCTGGGTCGCAAGGCGGGCTaGCTCACAAACTCTAACCTCGGCCTCTCGATGGCCACATTGATC +
Preference number: 5 (lower is better)
Translates to: CTWILTSGSLGRKAG*LTNSNLGLSMATLI
Trigger: GATCAATGTGGCCATCGAGAGGCCGAGGTTAGAGTTTGTGAGGCAGCCCGCCTTGCGACCCAGAGATCCAGAAGTAAGAATCCATGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp TCCATTTCTCCTTCCCTTGCAGATGAGCAGCCAACCAGACACAAATaGCACTGGCAGGGTTCCCACTTCTCCAAACAGCACAGTCGCCTG +
Preference number: 5 (lower is better)
Translates to: SISPSLADEQPTRHK*HWQGSHFSKQHSRL
Trigger: CAGGCGACTGTGCTGTTTGGAGAAGTGGGAACCCTGCCAGTGGCATTTGTGTCTGGTTGGCTGCTCATCTGCAAGGGAAGGAGAAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489180.6
ENST00000622020.4
CDS-3UTR CAA 90 bp CTAAGCTGGATGCAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGGTCATGTGTCTGTTTaGCTCTGCGGGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LSWMQVLQNDQRSVSASSGHVSV*LCGVLE
Trigger: CTCCAGGACCCCGCAGAGCAAAACAGACACATGACC...TGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTGCATCCAGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp ATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATGGCAGCACCAGAATGATCTCAAAGGCCTaGGAGATGAGCGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: ILSNSDNEGPTCVDGSTRMISKA*EMSGWR
Trigger: CCGCCAGCCGCTCATCTCCAAGGCCTTTGAGATCAT...TCTGGTGCTGCCATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GTTGACACCCTTCCCTTCGCCCGCAGCCAACATGATCTCAAAGGCCTTGGAGATCCATTTCTCCTTCCCTaGCAGATGAGCAGCCAACCA +
Preference number: 5 (lower is better)
Translates to: VDTLPFARSQHDLKGLGDPFLLP*QMSSQP
Trigger: TGGTTGGCTGCTCATCTGCAAGGGAAGGAGAAATGG...ATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGGCGAAGGGAAGGGTGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 90 bp TCTCAGGGCGCAGCAGGGCTGCTTAGGAACCACATGTCAAACAAATaGCAAGGCACGCTTTGGCCAAACACACATCCTGGACAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SQGAAGLLRNHMSNK*QGTLWPNTHPGQVS
Trigger: GGACACTTGTCCAGGATGTGTGTTTGGCCAAAGCGTGCCTTGTCATTTGTTTGACATGTGGTTCCTAAGCAGCCCTGCTGCGCCCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp CCCCTCTACATCCCAGGGAACAGCGCCTGGATTTTGGAAAGGACCTaGAAGCCAGATACTGAATCGCAGCTGGCGACACCAAAGACATTG +
Preference number: 5 (lower is better)
Translates to: PLYIPGNSAWILERT*KPDTESQLATPKTL
Trigger: CAATGTCTTTGGTGTCGCCAGCTGCGATTCAGTATCTGGCTTTCAGGTCCTTTCCAAAATCCAGGCGCTGTTCCCTGGGATGTAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 90 bp AAAATGCTTGTGCCATCAATTTCCTTAATTCCGACGAGGCAGTGTTaGGTGCCCTCGGGCCTGGGATGTCCTCACCATTTTCCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: KMLVPSISLIPTRQC*VPSGLGCPHHFPGS
Trigger: GCTCCCGGGAAAATGGTGAGGACATCCCAGGCCCGAGGGCACTCAACACTGCCTCGTCGGAATTAAGGAAATTGATGGCACAAGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 90 bp CGGGCTGCCTCACAAACTCTAACCTCGGCCTCTCGATGGCCACATTaGTCAAGGATAGGCCTGTGTGCATTTACACGTGCAAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: RAASQTLTSASRWPH*SRIGLCAFTRANVW
Trigger: CCAGACATTTGCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGAGAGGCCGAGGTTAGAGTTTGTGAGGCAGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 90 bp ATTCTCCTGCCGTGTCAGTGGCAGCCTCCGTTTCCTGGTGACGAATaGAAGCGTGTGGCACTCACAGTTCGCTGCACATGGATTCTTACT +
Preference number: 5 (lower is better)
Translates to: ILLPCQWQPPFPGDE*KRVALTVRCTWILT
Trigger: AGTAAGAATCCATGTGCAGCGAACTGTGAGTGCCACACGCTTTCATTCGTCACCAGGAAACGGAGGCTGCCACTGACACGGCAGGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp TCGATGGCCACATTGATCAAGGATAGGCCTGTGTGCATTTACACGTaGAAATGTCTGGCTCCACACACACCCAGGGTGAAAGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SMATLIKDRPVCIYT*KCLAPHTPRVKEPP
Trigger: TGGGGGCTCTTTCACCCTGGGTGTGTGTGGAGCCAGACATTTGCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp GACCCTGGTCGCTTTGCCACACTCGTCTACACTGCATACGATCACTaGATAGACATCGATGATTCCGGAACCTCAGTCACTGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: DPGRFATLVYTAYDH*IDIDDSGTSVTGRL
Trigger: CAGTCTCCCAGTGACTGAGGTTCCGGAATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS CCA 90 bp CTCCTGTCACTGTTCACCTTGCCAGGAATTCTGAACACCGGCCTTTaGGGTTGGTGTGTACGTCACTCACCCCACAATGGCACATCTAAC +
Preference number: 5 (lower is better)
Translates to: LLSLFTLPGILNTGL*GWCVRHSPHNGTSN
Trigger: GTTAGATGTGCCATTGTGGGGTGAGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGTGAACAGTGACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp AATCTCCAGCTACTAAAGATACAACGGGCCCACCCAACTATGGGATaGTACCTGTCACCGCCCTGGGGCTTTTGGAAGACTGCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: NLQLLKIQRAHPTMG*YLSPPWGFWKTAGD
Trigger: ATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCCATAGTTGGGTGGGCCCGTTGTATCTTTAGTAGCTGGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp ATAAACTGGAGCCTTCACCAGAGTTGTGTTCATAACAGAAGGCTTTaGCAAGCAAGTGGTGTGGCCTCGGGACAAGCGTGTCTCACGGCC +
Preference number: 5 (lower is better)
Translates to: INWSLHQSCVHNRRL*QASGVASGQACLTA
Trigger: GGCCGTGAGACACGCTTGTCCCGAGGCCACACCACTTGCTTGCCAAAGCCTTCTGTTATGAACACAACTCTGGTGAAGGCTCCAGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp CGTGTCAGTGGCAGCCTCCGTTTCCTGGTGACGAATGAAAGCGTGTaGCACTCACAGTTCGCTGCACATGGATTCTTACTTCTGGATCTC +
Preference number: 5 (lower is better)
Translates to: RVSGSLRFLVTNESV*HSQFAAHGFLLLDL
Trigger: GAGATCCAGAAGTAAGAATCCATGTGCAGCGAACTGTGAGTGCCACACGCTTTCATTCGTCACCAGGAAACGGAGGCTGCCACTGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGGGAGAGTCCGGCTGGTaGCTGAAGATCCGAAGAATT +
Preference number: 5 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQGESGW*LKIRRI
Trigger: AATTCTTCGGATCTTCAGCAACCAGCCGGACTCTCC...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS-3UTR CAA 90 bp GTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTCACTGTCCTGCTCGTATTCAGTaGCCACGACCTCAAGCTCGT +
Preference number: 5 (lower is better)
Translates to: VCLQLLGMRGESSHFPHCPARIQ*PRPQAR
Trigger: ACGAGCTTGAGGTCGTGGCAACTGAATACGAGCAGG...ACAGTGAGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CAGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAACCGTGTGCTGTGTGTaGTGGGGGTTCTTAAGCACA +
Preference number: 5 (lower is better)
Translates to: QVLQNDQRSVSASSAKCTTVCCV*WGFLST
Trigger: TGTGCTTAAGAACCCCCACAACACACAGCACACGGT...TGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS CCA 90 bp TCACTGTTCACCTTGCCAGGAATTCTGAACACCGGCCTTTGGGGTTaGTGTGTACGTCACTCACCCCACAATGGCACATCTAACGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLFTLPGILNTGLWG*CVRHSPHNGTSNER
Trigger: CCTTTCGTTAGATGTGCCATTGTGGGGTGAGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGTGAACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp AAAACTGAAGCTCCAAAAGCAACTATGGCAAAGGCACTGGCACGTTaGCCGCCTCCTACTGTCTGCGCACGAGCACAAATGCAGAATTCC +
Preference number: 5 (lower is better)
Translates to: KTEAPKATMAKALAR*PPPTVCARAQMQNS
Trigger: GGAATTCTGCATTTGTGCTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTGCCTTTGCCATAGTTGCTTTTGGAGCTTCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp TGGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGGGCCCACATTTGTAGCACCATCTCGTaGCTTTGTAGACAATCTGAT +
Preference number: 5 (lower is better)
Translates to: WTTGHLQKYVPWFPGAHICSTIS*LCRQSD
Trigger: ATCAGATTGTCTACAAAGCAACGAGATGGTGCTACA...AATGTGGGCCCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp CTCGTCTACACTGCATACGATCACTGCATAGACATCGATGATTCCGGAACCTCACAGACCCTGGTCGCTTaGCCACACTCGTCTACACTG +
Preference number: 5 (lower is better)
Translates to: LVYTAYDHCIDIDDSGTSQTLVA*PHSSTL
Trigger: CAGTGTAGACGAGTGTGGCAAAGCGACCAGGGTCTG...TGAGGTTCCGGAATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS-3UTR CAA 90 bp ACCTGTCCCACCCACCACAGTCCTGGACGTGGAGTGAAGTCCAGGGCTTTGCTCCACGGCTTAGTTTTATaGTGTTTTCAATTCTGCCCT +
Preference number: 5 (lower is better)
Translates to: TCPTHHSPGRGVKSRALLHGLVL*CFQFCP
Trigger: AGGGCAGAATTGAAAACACAATAAAACTAAGCCGTG...GAGCAAAGCCCTGGACTTCACTCCACGTCCAGGACTGTGGTGGGTGGGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS CCA 90 bp CACTTACGAGTAAATGATGACAAAGAAGTCTTTGATCTCCGGGCTTaGACCACTGGCCACCTTCAGAAATATGTCCCGTGGTTCCCCGGG +
Preference number: 5 (lower is better)
Translates to: HLRVNDDKEVFDLRA*TTGHLQKYVPWFPG
Trigger: CCCGGGGAACCACGGGACATATTTCTGAAGGTGGCCAGTGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTCATCATTTACTCGTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 90 bp ATGTCTGGCTCCACACACACCCAGGGTGAAAGAGCCCCCATAAACTaGAGCCTTCACCAGAGTTGTGTTCATAACAGAAGGCTTTGGCAA +
Preference number: 5 (lower is better)
Translates to: MSGSTHTQGERAPIN*SLHQSCVHNRRLWQ
Trigger: TTGCCAAAGCCTTCTGTTATGAACACAACTCTGGTGAAGGCTCCAGTTTATGGGGGCTCTTTCACCCTGGGTGTGTGTGGAGCCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS-3UTR CAA 90 bp AGGTACTACAAAATGACCAGCGCTCGGTCTCTGCTTCCTCAGCCAAGTGCACAGATGACAAAGAAGTCTTaGATCTCCGGGCTTGGACCA +
Preference number: 5 (lower is better)
Translates to: RYYKMTSARSLLPQPSAQMTKKS*ISGLGP
Trigger: TGGTCCAAGCCCGGAGATCAAAGACTTCTTTGTCAT...CTGTGCACTTGGCTGAGGAAGCAGAGACCGAGCGCTGGTCATTTTGTAGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS TCA 90 bp TCGAAGGCACACTTATTTCCGAGACTGAGCTGTCTAACATTACCATaGAAAGCCCTGGGCACAACACCCTTTCCCACACTCAGGAGAAAC +
Preference number: 5 (lower is better)
Translates to: SKAHLFPRLSCLTLP*KALGTTPFPTLRRN
Trigger: GTTTCTCCTGAGTGTGGGAAAGGGTGTTGTGCCCAGGGCTTTTCATGGTAATGTTAGACAGCTCAGTCTCGGAAATAAGTGTGCCTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 90 bp TTGGTCATCTGTCCCTGCTTCAGTCTTTGTAAGCTCTTTCAAAACTaGAGCTCCAAAAGCAACTATGGCAAAGGCACTGGCACGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LVICPCFSLCKLFQN*SSKSNYGKGTGTLA
Trigger: GGCCAACGTGCCAGTGCCTTTGCCATAGTTGCTTTTGGAGCTTCAGTTTTGAAAGAGCTTACAAAGACTGAAGCAGGGACAGATGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 90 bp ACAGACAGATGGAAAGCTGGTGACGCAGCAGCGAACAATCCCTGCTaGCCTCAAAGAACTCACATTCTCCTAATTCTTAAGTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: TDRWKAGDAAANNPC*PQRTHILLILKFLW
Trigger: CCAAAGGAACTTAAGAATTAGGAGAATGTGAGTTCTTTGAGGGCAGCAGGGATTGTTCGCTGCTGCGTCACCAGCTTTCCATCTGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 90 bp ACTGCCATTATTCCTCGCGAGTACAGCACACTTCTTAAATGCCAGTaGAGAAGGTCTGCAGTCCCAAGTCAAAACTACTCCTGCCATGAT +
Preference number: 5 (lower is better)
Translates to: TAIIPREYSTLLKCQ*RRSAVPSQNYSCHD
Trigger: ATCATGGCAGGAGTAGTTTTGACTTGGGACTGCAGACCTTCTCCACTGGCATTTAAGAAGTGTGCTGTACTCGCGAGGAATAATGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS-3UTR CAA 90 bp TTTGGGGTCTGTCTTCAGCTCCTGGGGATGAGAGGTGAAAGCTCTCACTTTCCTTGTAGCACCATCTCGTaGCTTTGTAGACAATCTGAT +
Preference number: 5 (lower is better)
Translates to: FGVCLQLLGMRGESSHFPCSTIS*LCRQSD
Trigger: ATCAGATTGTCTACAAAGCAACGAGATGGTGCTACA...AGGAAAGTGAGAGCTTTCACCTCTCATCCCCAGGAGCTGAAGACAGACCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378169.7
ENST00000489180.6
CDS-3UTR CAA 90 bp TTCATAAAATACATTTTGAGCAACAGCGATAACGAGGGTCCCACATGCGTAGATATGATCTCAAAGGCCTaGGAGATGAGCGGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: FIKYILSNSDNEGPTCVDMISKA*EMSGWR
Trigger: CCGCCAGCCGCTCATCTCCAAGGCCTTTGAGATCAT...ATCTACGCATGTGGGACCCTCGTTATCGCTGTTGCTCAAAATGTATTTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378156.9
ENST00000489180.6
CDS GCA 90 bp CCCCGATGTGGTGGTAGAGAGAGGCTAGATTTAGAAATCACAGACTaGCTGGAATCAATCTCTAGAAAACTTCTAGAAGAGCTTCACTTC +
Preference number: 5 (lower is better)
Translates to: PRCGGRERLDLEITD*LESISRKLLEELHF
Trigger: GAAGTGAAGCTCTTCTAGAAGTTTTCTAGAGATTGATTCCAGGCAGTCTGTGATTTCTAAATCTAGCCTCTCTCTACCACCACATCGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 90 bp TGGCTTCTTTCTTCTGTTCACAACATAGGGTACTTCAACTTGTTTTaGAAATCAGTCTATGTTCCTCCTGACCTTCTCTCCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: WLLSSVHNIGYFNLF*KSVYVPPDLLSISP
Trigger: AGGAGAAATGGAGAGAAGGTCAGGAGGAACATAGACTGATTTTCAAAACAAGTTGAAGTACCCTATGTTGTGAACAGAAGAAAGAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6
CDS TCA 72 bp AGGCCCGGCGGCCGGTGCTCAACGGAGCCACAAGCCTaGGGACCGAGGACTGGCCGAGGGGCGCGCCCCGTC +
Preference number: 6 (lower is better)
Translates to: RPGGRCSTEPQA*GPRTGRGARPV
Trigger: GACGGGGCGCGCCCCTCGGCCAGTCCTCGGTCCTCAGGCTTGTGGCTCCGTTGAGCACCGGCCGCCGGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp GCCAAGGGCAGCGCCACGCAGGAGACAGGGTGGGGCTaGAGGTCATGCCGGCCTGAGCACGGAAGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: AKGSATQETGWG*RSCRPEHGSPC
Trigger: ACAGGGGCTTCCGTGCTCAGGCCGGCATGACCTCCAGCCCCACCCTGTCTCCTGCGTGGCGCTGCCCTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp AGGTACTGGCGCTGGCGGGCTCGAAGGGGACGTGGGTaGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: RYWRWRARRGRG*FPGRPPLHFGA
Trigger: GGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGCCCGCCAGCGCCAGTACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378156.9
ENST00000489180.6
ENST00000622020.4
CDS TCA 72 bp ACTCCACACCCCATGCCGGCCTCACGCACCCGGGCATaGCACACCCCCTGCAGGCACACCTCACACACCACC +
Preference number: 6 (lower is better)
Translates to: TPHPMPASRTRA*HTPCRHTSHTT
Trigger: GGTGGTGTGTGAGGTGTGCCTGCAGGGGGTGTGTCATGCCCGGGTGCGTGAGGCCGGCATGGGGTGTGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 72 bp ACGACCTGCGGCCTCTGCACGAAGCCCAGACCATTGTaGACGCCCACACGCAGGCGCCGCTCCAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: TTCGLCTKPRPL*TPTRRRRSRIS
Trigger: GGAGATCCTGGAGCGGCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTTCGTGCAGAGGCCGCAGGTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp CTCGAGGTACTGGCGCTGGCGGGCTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGG +
Preference number: 6 (lower is better)
Translates to: LEVLALAGSKGT*VVSWKAAAPLW
Trigger: CCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAGCCCGCCAGCGCCAGTACCTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378156.9
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp CAGGTCTCCACCAGGAGGGGACCGCTAAGCAAGGTCTaGGCCGGCACCCACACAGGGCACCCAAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: QVSTRRGPLSKV*AGTHTGHPSSH
Trigger: GTGGCTGCTTGGGTGCCCTGTGTGGGTGCCGGCCCAGACCTTGCTTAGCGGTCCCCTCCTGGTGGAGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CAA 90 bp GGCACCAGTACAACGACCTGCGGCCTCTGCACGAAGCCCAGACCATaGTGCACGCCCACACGCAGGCGCCGCTCCAGGATCTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: GTSTTTCGLCTKPRP*CTPTRRRRSRISRA
Trigger: TGCCCTGGAGATCCTGGAGCGGCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS GCA 72 bp CCAAGGGGAGCTGACAAGGCAGGGGAGCCCTGCGGGTaGATCCAAGGCCTGCCTTTGACTTCAGCGCCCGGT +
Preference number: 6 (lower is better)
Translates to: PRGADKAGEPCG*IQGLPLTSAPG
Trigger: ACCGGGCGCTGAAGTCAAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTGCCTTGTCAGCTCCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GCACCCGGCCCTGCTGGGTCAGAACACTGTATCCAGTaGTCCGAGTCACAGGGCCGAGGTGGGGGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: APGPAGSEHCIQ*SESQGRGGGPA
Trigger: TGCAGGACCCCCACCTCGGCCCTGTGACTCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 72 bp GCCTCCAACGGGAACTCCTGTCGAAGGGGACGTGGGTaGTTTCCTGGAAGGCCGCCGCTCCACTTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: ASNGNSCRRGRG*FPGRPPLHFGA
Trigger: GGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGACAGGAGTTCCCGTTGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478423.6
CDS CAA 72 bp ACAACGACCTGCGGCCTCTGCACGAAGCCCAGACCATaGTGCACGCCCACACGCAGGCGCCGCTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: TTTCGLCTKPRP*CTPTRRRRSRI
Trigger: GATCCTGGAGCGGCGCCTGCGTGTGGGCGTGCACAATGGTCTGGGCTTCGTGCAGAGGCCGCAGGTCGTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CAA 90 bp ACGTGGGGCTGCAGCTCCACAGTCAGGCAGAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAACAAGACCTGTGAGGAGGCCACGCTG +
Preference number: 6 (lower is better)
Translates to: TWGCSSTVRQSTAMG*PPLARNKTCEEATL
Trigger: CAGCGTGGCCTCCTCACAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGCAGCCCCACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 72 bp GCTGGGAGCACGCCCACGTGCAGGCACCTGTGGAGGTaGGCCATATCCTCCGTCCAACCCAGGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: AGSTPTCRHLWR*AISSVQPRFSW
Trigger: CCAGGAGAACCTGGGTTGGACGGAGGATATGGCTCACCTCCACAGGTGCCTGCACGTGGGCGTGCTCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp GCCACGTCTGTGTGGGTGTCGCCAGCCAGCGATCCCTaGAGTGGGATGGGAGCCATCTGCACTTGTCCCGGA +
Preference number: 6 (lower is better)
Translates to: ATSVWVSPASDP*SGMGAICTCPG
Trigger: TCCGGGACAAGTGCAGATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGACGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp AGGACCAGGGAGGTCTGGCTCAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAACGGGAACTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: RTREVWLRSASR*EIPASNGNSCA
Trigger: GGCACAGGAGTTCCCGTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378156.9
CDS CCA 72 bp TGCGCAAGTCAGGCCAGGAGGTCCTGGAGTGGGTGGTaGCAGGGCCAAGTTCGCGGTCAAGCACGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: CASQARRSWSGW*QGQVRGQARQH
Trigger: GTGCTGACGTGCTTGACCGCGAACTTGGCCCTGCCACCACCCACTCCAGGACCTCCTGGCCTGACTTGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 72 bp GCTGCAGGGAGTGGAGGTAGACCTGCCACGTCTGTGTaGGTGTCGCCAGCCAGCGATCCCTGCAGTGGGATG +
Preference number: 6 (lower is better)
Translates to: AAGSGGRPATSV*VSPASDPCSGM
Trigger: CATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGACGTGGCAGGTCTACCTCCACTCCCTGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GTGCTCCAGCTGAATGCCCACTGCCCGTCTCCAGGCTaGGGTTGGGGAGAGGCTCAGAACAGCCCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: VLQLNAHCPSPG*GWGEAQNSPQR
Trigger: TCTCTGGGGGCTGTTCTGAGCCTCTCCCCAACCCCAGCCTGGAGACGGGCAGTGGGCATTCAGCTGGAGCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp ACTGCCGAGAGGCCTCTGGTAACAGCGTCTGCGCGCTaGAGGCGCTGGAAAAGCTGCTGTCAGGGCCACCCA +
Preference number: 6 (lower is better)
Translates to: TAERPLVTASAR*RRWKSCCQGHP
Trigger: TGGGTGGCCCTGACAGCAGCTTTTCCAGCGCCTCCAGCGCGCAGACGCTGTTACCAGAGGCCTCTCGGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GCCTGCAGCCCAATCAGCCAGGGGAGCCCAAGGTCATaGGTGGTTCCGGGGCGGCCAAATCTGAGGCCACAA +
Preference number: 6 (lower is better)
Translates to: ACSPISQGSPRS*VVPGRPNLRPQ
Trigger: TTGTGGCCTCAGATTTGGCCGCCCCGGAACCACCCATGACCTTGGGCTCCCCTGGCTGATTGGGCTGCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp AGCACAGCCTCTCAGGATGTGCAAGCAAGGGGCTCCTaGGCGCCTGCAGCCCAATCAGCCAGGGGAGCCCAA +
Preference number: 6 (lower is better)
Translates to: STASQDVQARGS*APAAQSARGAQ
Trigger: TTGGGCTCCCCTGGCTGATTGGGCTGCAGGCGCCCAGGAGCCCCTTGCTTGCACATCCTGAGAGGCTGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp ACCGGCCTCCAACGGGAACTCCTGTCGAAGGGGACGTaGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTTGG +
Preference number: 6 (lower is better)
Translates to: TGLQRELLSKGT*VVSWKAAAPLW
Trigger: CCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGACAGGAGTTCCCGTTGGAGGCCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478423.6
CDS CCA 72 bp AGGACCAGGGAGGTCTGGCTCAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAACGGGAACTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RTREVWLRSASR*EIPASNGNSAW
Trigger: CCAGGCAGAGTTCCCGTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489180.6
ENST00000622020.4
CDS TCA 72 bp CCCTCCAAGGTGCCTTCCCTAGACCCCTGCGGGCCCTaGACTCGCAGCAGAATCCCGCCTCACAAAGCGAAG +
Preference number: 6 (lower is better)
Translates to: PSKVPSLDPCGP*TRSRIPPHKAK
Trigger: CTTCGCTTTGTGAGGCGGGATTCTGCTGCGAGTTCAGGGCCCGCAGGGGTCTAGGGAAGGCACCTTGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp TCAGCCTGTGCCTGCCACACATACAGACCTTGGAGATaGGCGGCTGGCGGCAGCAGAGGCACACGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SACACHTYRPWR*AAGGSRGTRAR
Trigger: CCTGGCTCGTGTGCCTCTGCTGCCGCCAGCCGCTCATCTCCAAGGTCTGTATGTGTGGCAGGCACAGGCTGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 72 bp CGGGAACAGCCACTGGCCCTTCCTCCAAGTATTCCCTaGGTCTCCTGTGCACCGTGCACGGGGACCCCCACA +
Preference number: 6 (lower is better)
Translates to: REQPLALPPSIP*VSCAPCTGTPT
Trigger: TGTGGGGGTCCCCGTGCACGGTGCACAGGAGACTCAGGGAATACTTGGAGGAAGGGCCAGTGGCTGTTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 72 bp CAGGGGAGCCCTGCGGGTGCATCCAAGGCCTGCCTTTaGCTTCAGCGCCCGGTACAAGGATGGGAACCAGTG +
Preference number: 6 (lower is better)
Translates to: QGSPAGASKACL*LQRPVQGWEPV
Trigger: CACTGGTTCCCATCCTTGTACCGGGCGCTGAAGTCAAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp CCAAGGGAGCCAGGCAGGTCTCCGAGCTGCTCTACCTaGGTTCAGCCCCTCTACATCCCAGGGAACAGCGCC +
Preference number: 6 (lower is better)
Translates to: PREPGRSPSCST*VQPLYIPGNSA
Trigger: GGCGCTGTTCCCTGGGATGTAGAGGGGCTGAACTCAGGTAGAGCAGCTCGGAGACCTGCCTGGCTCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp GCAGCTCCACAGTCAGGCAGAGCACGGCGATGGGCTTaGCACCACTCGCTCGGAACAAGACCTGTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: AAPQSGRARRWA*HHSLGTRPVRR
Trigger: CCTCCTCACAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 72 bp TCGCAGGGGTCTCCAGCTTCCCCTCAAGTTAAAGCCTaGACCCTCCCAGTGGAGGCTGCAGAGCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: SQGSPASPQVKA*TLPVEAAEPLP
Trigger: GGGCAGAGGCTCTGCAGCCTCCACTGGGAGGGTGCAGGCTTTAACTTGAGGGGAAGCTGGAGACCCCTGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp GCCTCCATGTCGCCCACATGCCCTACACTGTGCTTCTaGCTTCGGGCTACCAACCGCCTCCTGGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: ASMSPTCPTLCF*LRATNRLLAPA
Trigger: TGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATGTGGGCGACATGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp GACGCAGCCTCCATGTCGCCCACATGCCCTACACTGTaGTTCTGCCTTCGGGCTACCAACCGCCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: DAASMSPTCPTL*FCLRATNRLLA
Trigger: TGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATGTGGGCGACATGGAGGCTGCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp CCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCCCAGTaGTGGGAGCACGCCCACGTGCAGGCACCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: PVRSCCFQGRAQ*WEHAHVQAPVE
Trigger: CTCCACAGGTGCCTGCACGTGGGCGTGCTCCCAGCACTGGGCTCGTCCTTGAAAACAGCAGCTTCTGACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp CTGGGGGAAGCCGTGCTTGCCCACGGCACACTCTCCTaGAAGGATGGGACCCACAACCTCGGTGTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: LGEAVLAHGTLS*KDGTHNLGVAF
Trigger: AAAGGCCACACCGAGGTTGTGGGTCCCATCCTTGCAGGAGAGTGTGCCGTGGGCAAGCACGGCTTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp CAGGACAGGCTCGTCACAGGTGCTCAGCAAGACACCTaGTGGGGAAACGGACGCCGCCACCTTTCCCAGGAC +
Preference number: 6 (lower is better)
Translates to: QDRLVTGAQQDT*WGNGRRHLSQD
Trigger: GTCCTGGGAAAGGTGGCGGCGTCCGTTTCCCCAGCAGGTGTCTTGCTGAGCACCTGTGACGAGCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS CCA 72 bp CCTGTGTGCATGTGCGCAAGTCAGGCCAGGAGGTCCTaGAGTGGGTGGTGGCAGGGCCAAGTTCGCGGTCAA +
Preference number: 6 (lower is better)
Translates to: PVCMCASQARRS*SGWWQGQVRGQ
Trigger: TTGACCGCGAACTTGGCCCTGCCACCACCCACTCCAGGACCTCCTGGCCTGACTTGCGCACATGCACACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 72 bp TGTGGGTGTCGCCAGCCAGCGATCCCTGCAGTGGGATaGGAGCCATCTGCACTTGTCCCGGAGGACTCAGCA +
Preference number: 6 (lower is better)
Translates to: CGCRQPAIPAVG*EPSALVPEDSA
Trigger: TGCTGAGTCCTCCGGGACAAGTGCAGATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GTCTGTGTGGGTGTCGCCAGCCAGCGATCCCTGCAGTaGGATGGGAGCCATCTGCACTTGTCCCGGAGGACT +
Preference number: 6 (lower is better)
Translates to: VCVGVASQRSLQ*DGSHLHLSRRT
Trigger: AGTCCTCCGGGACAAGTGCAGATGGCTCCCATCCCACTGCAGGGATCGCTGGCTGGCGACACCCACACAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp CCTGCACCCCACGAGGCGGCAGCACGAAGACACCTTTaGGGTCTGTCTTCAAGAGCGAGAGAGGCGGGTCAG +
Preference number: 6 (lower is better)
Translates to: PAPHEAAARRHL*GLSSRAREAGQ
Trigger: CTGACCCGCCTCTCTCGCTCTTGAAGACAGACCCCAAAGGTGTCTTCGTGCTGCCGCCTCGTGGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GACAGGCTCGTCACAGGTGCTCAGCAAGACACCTGCTaGGGAAACGGACGCCGCCACCTTTCCCAGGACAGC +
Preference number: 6 (lower is better)
Translates to: DRLVTGAQQDTC*GNGRRHLSQDS
Trigger: GCTGTCCTGGGAAAGGTGGCGGCGTCCGTTTCCCCAGCAGGTGTCTTGCTGAGCACCTGTGACGAGCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS CCA 72 bp AGGACCAGGGAGGTCTGGCTCAGGTCGGCTTCCAGGTaGGAGATACCGGCCTCCAACGGGAACTCCTGTCGA +
Preference number: 6 (lower is better)
Translates to: RTREVWLRSASR*EIPASNGNSCR
Trigger: TCGACAGGAGTTCCCGTTGGAGGCCGGTATCTCCCACCTGGAAGCCGACCTGAGCCAGACCTCCCTGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478423.6
CDS CAA 72 bp GCAGGGGAGCCCTGCGGGTGCATCCAAGGCCTGCCTTaGACTTCAGCGCCCGGTACAAGGATGGGAACCAGT +
Preference number: 6 (lower is better)
Translates to: AGEPCGCIQGLP*TSAPGTRMGTS
Trigger: ACTGGTTCCCATCCTTGTACCGGGCGCTGAAGTCAAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 90 bp CCAAGGCTGGCGCGCTCTCTGTGGGTGGGGAGGGACAAGCACGTTTaGGGTGAAGATCCTGTGCCAGTCGTTCATCCTGCCCGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: PRLARSLWVGRDKHV*GEDPVPVVHPARLR
Trigger: CCTCAGGCGGGCAGGATGAACGACTGGCACAGGATCTTCACCCAAAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CAA 90 bp GCTGACAAGGCAGGGGAGCCCTGCGGGTGCATCCAAGGCCTGCCTTaGACTTCAGCGCCCGGTACAAGGATGGGAACCAGTGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: ADKAGEPCGCIQGLP*TSAPGTRMGTSAQP
Trigger: TGGCTGAGCACTGGTTCCCATCCTTGTACCGGGCGCTGAAGTCAAAGGCAGGCCTTGGATGCACCCGCAGGGCTCCCCTGCCTTGTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 90 bp GTCGAAGGGGACGTGGGTGGTTTCCTGGAAGGCCGCCGCTCCACTTaGGGGCCACTGACAGGCTCCGTGGGTGCATCCAGGTGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: VEGDVGGFLEGRRST*GPLTGSVGASRCSS
Trigger: AGAAGAACACCTGGATGCACCCACGGAGCCTGTCAGTGGCCCCAAAGTGGAGCGGCGGCCTTCCAGGAAACCACCCACGTCCCCTTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478423.6
CDS TCA 72 bp GATGGGCTTGCCACCACTCGCTCGGAACAAGACCTGTaGGGAGGCCACGCTGAGTGTTGGGATGGGCACGAG +
Preference number: 6 (lower is better)
Translates to: DGLATTRSEQDL*GGHAECWDGHE
Trigger: CTCGTGCCCATCCCAACACTCAGCGTGGCCTCCTCACAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 72 bp GTGAGGCATCTTCATGGGCTCACGAGGAAGCCACTCTaGGACGTGGTCACGTGGCCCCTCTGTGGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: VRHLHGLTRKPL*DVVTWPLCGGH
Trigger: GTGCCCACCACAGAGGGGCCACGTGACCACGTCTCAGAGTGGCTTCCTCGTGAGCCCATGAAGATGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp GGGCGGCCAAATCTGAGGCCACAACCAACCCTGACATaGCTGTGGCCGCGACTTGGGTCCACACCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: GRPNLRPQPTLT*LWPRLGSTPGK
Trigger: CTTGCCTGGTGTGGACCCAAGTCGCGGCCACAGTCATGTCAGGGTTGGTTGTGGCCTCAGATTTGGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp GGAACAGCAGATCCCAGGTGGAAACCCGGCTCTGCCTaGAGCCAAAGGCCTGAGGTCCCACCTGCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: GTADPRWKPGSA*SQRPEVPPAVL
Trigger: GAGGACTGCAGGTGGGACCTCAGGCCTTTGGCTTCAGGCAGAGCCGGGTTTCCACCTGGGATCTGCTGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 72 bp AAAGGCAACTGCCGAGAGGCCTCTGGTAACAGCGTCTaGGCGCTGGAGGCGCTGGAAAAGCTGCTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KGNCREASGNSV*ALEALEKLLSG
Trigger: CCCTGACAGCAGCTTTTCCAGCGCCTCCAGCGCGCAGACGCTGTTACCAGAGGCCTCTCGGCAGTTGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 72 bp CTTCTGCCTTCGGGCTACCAACCGCCTCCTGGCACCTaGAGCGTCCACTCAGTCCTCACTCCAAGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: LLPSGYQPPPGT*SVHSVLTPSQL
Trigger: AAGCTGGCTTGGAGTGAGGACTGAGTGGACGCTGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp ACCTTTCCCAGGACAGCATCCAAGCACTGTGTTCCCTaGATGGACACCGCCCATCCAGCCCACTGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: TFPRTASKHCVP*MDTAHPAHCGS
Trigger: CGAGCCGCAGTGGGCTGGATGGGCGGTGTCCATGCAGGGAACACAGTGCTTGGATGCTGTCCTGGGAAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS GCA 72 bp GGCAGGGTTCCCACTTCTCCAAACAGCACAGTCGCCTaGAGAGCCCAGCGCCTTGAGCTTCCAGTCGTGAGG +
Preference number: 6 (lower is better)
Translates to: GRVPTSPNSTVA*RAQRLELPVVR
Trigger: CCTCACGACTGGAAGCTCAAGGCGCTGGGCTCTGCAGGCGACTGTGCTGTTTGGAGAAGTGGGAACCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp TGGAGAAGCGGGTGCAGGAGGGCTCTGGGGGTGCCATaGTACAGCCGCAACCTTTTGTCCTGGGAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: WRSGCRRALGVP*YSRNLLSWEAE
Trigger: CTCTGCTTCCCAGGACAAAAGGTTGCGGCTGTACCATGGCACCCCCAGAGCCCTCCTGCACCCGCTTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp GCCACAACCAACCCTGACATGACTGTGGCCGCGACTTaGGTCCACACCAGGCAAGTCCCTCCTCTCACACGG +
Preference number: 6 (lower is better)
Translates to: ATTNPDMTVAAT*VHTRQVPPLTR
Trigger: CCGTGTGAGAGGAGGGACTTGCCTGGTGTGGACCCAAGTCGCGGCCACAGTCATGTCAGGGTTGGTTGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp ACACTGTATCCAGTGGTCCGAGTCACAGGGCCGAGGTaGGGGTCCTGCAGTGCCCTGGTATTGAGCCCCCAT +
Preference number: 6 (lower is better)
Translates to: TLYPVVRVTGPR*GSCSALVLSPH
Trigger: ATGGGGGCTCAATACCAGGGCACTGCAGGACCCCCACCTCGGCCCTGTGACTCGGACCACTGGATACAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CCA 72 bp CACTGTGCTTCTGCCTTCGGGCTACCAACCGCCTCCTaGCACCTGCAGCGTCCACTCAGTCCTCACTCCAAG +
Preference number: 6 (lower is better)
Translates to: HCASAFGLPTAS*HLQRPLSPHSK
Trigger: CTTGGAGTGAGGACTGAGTGGACGCTGCAGGTGCCAGGAGGCGGTTGGTAGCCCGAAGGCAGAAGCACAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp CAGCGCCATCCCTGGAGGCAGCTTGAAAGCTCACTCTaGGCAGCTGTAGGGTCAAGCCGCCTGCTCACCTGT +
Preference number: 6 (lower is better)
Translates to: QRHPWRQLESSL*AAVGSSRLLTC
Trigger: ACAGGTGAGCAGGCGGCTTGACCCTACAGCTGCCCAGAGTGAGCTTTCAAGCTGCCTCCAGGGATGGCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp GTCAGAAGCTGCTGTTTTCAAGGACGAGCCCAGTGCTaGGAGCACGCCCACGTGCAGGCACCTGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: VRSCCFQGRAQC*EHAHVQAPVEV
Trigger: CACCTCCACAGGTGCCTGCACGTGGGCGTGCTCCCAGCACTGGGCTCGTCCTTGAAAACAGCAGCTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp CACTCTCCTGCAAGGATGGGACCCACAACCTCGGTGTaGCCTTTACTTCCCCAAGGGGCGAGGCAGAGCACC +
Preference number: 6 (lower is better)
Translates to: HSPARMGPTTSV*PLLPQGARQST
Trigger: GGTGCTCTGCCTCGCCCCTTGGGGAAGTAAAGGCCACACCGAGGTTGTGGGTCCCATCCTTGCAGGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp AGCCGTGCTTGCCCACGGCACACTCTCCTGCAAGGATaGGACCCACAACCTCGGTGTGGCCTTTACTTCCCC +
Preference number: 6 (lower is better)
Translates to: SRACPRHTLLQG*DPQPRCGLYFP
Trigger: GGGGAAGTAAAGGCCACACCGAGGTTGTGGGTCCCATCCTTGCAGGAGAGTGTGCCGTGGGCAAGCACGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp TGCAGCTCCACAGTCAGGCAGAGCACGGCGATGGGCTaGCCACCACTCGCTCGGAACAAGACCTGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: CSSTVRQSTAMG*PPLARNKTCEE
Trigger: CTCCTCACAGGTCTTGTTCCGAGCGAGTGGTGGCAAGCCCATCGCCGTGCTCTGCCTGACTGTGGAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CAA 72 bp TCCTGCACCCCACGAGGCGGCAGCACGAAGACACCTTaGGGGTCTGTCTTCAAGAGCGAGAGAGGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: SCTPRGGSTKTP*GSVFKSERGGS
Trigger: TGACCCGCCTCTCTCGCTCTTGAAGACAGACCCCAAAGGTGTCTTCGTGCTGCCGCCTCGTGGGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 90 bp CTTGGCTGCAGCAGATCCACCTGCTGCGCCAGGTTCCTTCCCCTCTaGCCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCCCAGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LGCSRSTCCARFLPL*PVRSCCFQGRAQCW
Trigger: CCAGCACTGGGCTCGTCCTTGAAAACAGCAGCTTCTGACGGGCAAGAGGGGAAGGAACCTGGCGCAGCAGGTGGATCTGCTGCAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 90 bp GGGACAAGCGTGTCTCACGGCCGGTGGGTGTGGCACCCTACAAACTaGCAACTTGCAAACCTGAGTGTCCTGGGGGAAGCCGTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: GTSVSHGRWVWHPTN*QLANLSVLGEAVLA
Trigger: GGCAAGCACGGCTTCCCCCAGGACACTCAGGTTTGCAAGTTGCAAGTTTGTAGGGTGCCACACCCACCGGCCGTGAGACACGCTTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp TACCGGTCCGTCCAGCCACTTGAGGACACACTGGAATaGCGTGGATTCCTTCCAAGGCTGGCGCGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: YRSVQPLEDTLE*RGFLPRLARSL
Trigger: CAGAGAGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGACCGGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS GCA 72 bp TATCTCCACTGTTGCCAAGACCCCCTCACCCTCCACTaGCATGAGCGGGGAAGGTCGGGCATCGTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: YLHCCQDPLTLH*HERGRSGIVKG
Trigger: GCCTTTGACGATGCCCGACCTTCCCCGCTCATGGCAGTGGAGGGTGAGGGGGTCTTGGCAACAGTGGAGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 72 bp TTCTTTCTCCTTGACCTCGACGTCAGCACCATGCTGTaGAGCAGGACAGCCGTGCTGACTTCCCCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: FFLLDLDVSTML*SRTAVLTSPSA
Trigger: GGCCGAGGGGGAAGTCAGCACGGCTGTCCTGCTGCACAGCATGGTGCTGACGTCGAGGTCAAGGAGAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp GCAGATCCACCTGCTGCGCCAGGTTCCTTCCCCTCTTaGCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCCC +
Preference number: 6 (lower is better)
Translates to: ADPPAAPGSFPS*PSEAAVFKDEP
Trigger: GGGCTCGTCCTTGAAAACAGCAGCTTCTGACGGGCAAGAGGGGAAGGAACCTGGCGCAGCAGGTGGATCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp ACTTGCAAACCTGAGTGTCCTGGGGGAAGCCGTGCTTaGCCACGGCACACTCTCCTGCAAGGATGGGACCCA +
Preference number: 6 (lower is better)
Translates to: TCKPECPGGSRA*PRHTLLQGWDP
Trigger: TGGGTCCCATCCTTGCAGGAGAGTGTGCCGTGGGCAAGCACGGCTTCCCCCAGGACACTCAGGTTTGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp AAAACACAGCTCCCTGGAGCAGGGAAGCCTGCACTCTaGTGTAAGGGGCACCTACCAGAAACACGCGGGCCG +
Preference number: 6 (lower is better)
Translates to: KTQLPGAGKPAL*CKGHLPETRGP
Trigger: CGGCCCGCGTGTTTCTGGTAGGTGCCCCTTACAGCAGAGTGCAGGCTTCCCTGCTCCAGGGAGCTGTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS GCA 72 bp TGTGTTCCCTGCATGGACACCGCCCATCCAGCCCACTaGGGCTCGGCTGCAGCCATCTCCACAGGGAATAAT +
Preference number: 6 (lower is better)
Translates to: CVPCMDTAHPAH*GSAAAISTGNN
Trigger: ATTATTCCCTGTGGAGATGGCTGCAGCCGAGCCGCAGTGGGCTGGATGGGCGGTGTCCATGCAGGGAACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS CCA 72 bp AAGGGGCCGGGTCATTTAGCCTGGAGGAGAGAGGGATaGGCATTTCCACCACAGTCCTGCCTCTCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: KGPGHLAWRREG*AFPPQSCLSAG
Trigger: TCCTGCGGAGAGGCAGGACTGTGGTGGAAATGCCCATCCCTCTCTCCTCCAGGCTAAATGACCCGGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp ATCTTCATGGGCTCACGAGGAAGCCACTCTGAGACGTaGTCACGTGGCCCCTCTGTGGTGGGCACTGAGTGC +
Preference number: 6 (lower is better)
Translates to: IFMGSRGSHSET*SRGPSVVGTEC
Trigger: GCACTCAGTGCCCACCACAGAGGGGCCACGTGACCACGTCTCAGAGTGGCTTCCTCGTGAGCCCATGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 72 bp CTAAGCGCTGCCTCCGCAGACAGAACTGAAGCCATCTaGGGCTTAAAACCCCGGCCAGCTGGTGGCACCAGG +
Preference number: 6 (lower is better)
Translates to: LSAASADRTEAI*GLKPRPAGGTR
Trigger: CCTGGTGCCACCAGCTGGCCGGGGTTTTAAGCCCAAGATGGCTTCAGTTCTGTCTGCGGAGGCAGCGCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 90 bp AGTACCTCCAGCACGCCCTGCCTAATTACCGGTCCGTCCAGCCACTaGAGGACACACTGGAATGCCGTGGATTCCTTCCAAGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: STSSTPCLITGPSSH*RTHWNAVDSFQGWR
Trigger: GCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGACCGGTAATTAGGCAGGGCGTGCTGGAGGTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CAA 90 bp ACTGCGCTGGACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCCTGCAGGAACCGAACAGCACAAGCA +
Preference number: 6 (lower is better)
Translates to: TALDFQGDTASMPFS*LNPGEACRNRTAQA
Trigger: TGCTTGTGCTGTTCGGTTCCTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTCCAGCGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS TCA 72 bp GGGTGTGGCACCCTACAAACTTGCAACTTGCAAACCTaGGTGTCCTGGGGGAAGCCGTGCTTGCCCACGGCA +
Preference number: 6 (lower is better)
Translates to: GCGTLQTCNLQT*VSWGKPCLPTA
Trigger: TGCCGTGGGCAAGCACGGCTTCCCCCAGGACACTCAGGTTTGCAAGTTGCAAGTTTGTAGGGTGCCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp AAGGCCACATCCATCTCAGGCACCAGTACAACGACCTaGGGCCTCTGCACGAAGCCCAGACCATTGTGCACG +
Preference number: 6 (lower is better)
Translates to: KATSISGTSTTT*GLCTKPRPLCT
Trigger: CGTGCACAATGGTCTGGGCTTCGTGCAGAGGCCGCAGGTCGTTGTACTGGTGCCTGAGATGGATGTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS GCA 72 bp GCAAAGGCACTGGCACGTTGGCCGCCTCCTACTGTCTaGGCACGAGCACAAATGCAGAATTCCCTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AKALARWPPPTV*ARAQMQNSLAQ
Trigger: CTGAGCCAGGGAATTCTGCATTTGTGCTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTGCCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp GCAGGCACACCTCACACACCACCCCCTGCACACAAGTaGACACCTGCACACACACCTCACATACTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: AGTPHTPPPAHK*TPAHTPHILPA
Trigger: TGCAGGGAGTATGTGAGGTGTGTGTGCAGGTGTGCACTTGTGTGCAGGGGGTGGTGTGTGAGGTGTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 72 bp TCTCCAGGCAGCAACCATCACCAACCGGCCTCACTGTaGCAGAGAAGGCTGAGGCTGCCAGGAACAAAGGGA +
Preference number: 6 (lower is better)
Translates to: SPGSNHHQPASL*QRRLRLPGTKG
Trigger: TCCCTTTGTTCCTGGCAGCCTCAGCCTTCTCTGGCACAGTGAGGCCGGTTGGTGATGGTTGCTGCCTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 72 bp ACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTTaGTCAACCCAGGAGAGGCCTGCAGGAACCGAACAG +
Preference number: 6 (lower is better)
Translates to: TSKVTRRPCPSR*STQERPAGTEQ
Trigger: CTGTTCGGTTCCTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS GCA 72 bp GGCAGCCAGCTCACTGTCCACGTCCGCCAGCTTCTGTaGTTGCACCACGTGTTTTCCTGCGAAAGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: GSQLTVHVRQLL*LHHVFSCERVR
Trigger: TCTGACCCTTTCGCAGGAAAACACGTGGTGCAAGCACAGAAGCTGGCGGACGTGGACAGTGAGCTGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506941.1
CDS CCA 72 bp GTGGATTCCTTCCAAGGCTGGCGCGCTCTCTGTGGGTaGGGAGGGACAAGCACGTTTTGGGTGAAGATCCTG +
Preference number: 6 (lower is better)
Translates to: VDSFQGWRALCG*GGTSTFWVKIL
Trigger: CAGGATCTTCACCCAAAACGTGCTTGTCCCTCCCCACCCACAGAGAGCGCGCCAGCCTTGGAAGGAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp AGGAAGAAGGTGGAACGCAGGCTCCAGGGCCGGGTGTaGCTTCAGCGTGTACTGCAGGCTGCAGTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: RKKVERRLQGRV*LQRVLQAAVLN
Trigger: ATTGAGAACTGCAGCCTGCAGTACACGCTGAAGCCACACCCGGCCCTGGAGCCTGCGTTCCACCTTCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp AGTGGGCCACATCCCTCCTGGAAGTGGTCCTGGACGTaGAGCTCCAGCAGCTCTTCCTCAAACTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SGPHPSWKWSWT*SSSSSSSNFSR
Trigger: CCTGGAGAAGTTTGAGGAAGAGCTGCTGGAGCTCCACGTCCAGGACCACTTCCAGGAGGGATGTGGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp GGGCCAAGAGCCTGCTGCTTCACAGTCAAATGGGGCTaGGTGAGGCATCTTCATGGGCTCACGAGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: GPRACCFTVKWG*VRHLHGLTRKP
Trigger: TGGCTTCCTCGTGAGCCCATGAAGATGCCTCACCCAGCCCCATTTGACTGTGAAGCAGCAGGCTCTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GGCCTCGGGACAAGCGTGTCTCACGGCCGGTGGGTGTaGCACCCTACAAACTTGCAACTTGCAAACCTGAGT +
Preference number: 6 (lower is better)
Translates to: GLGTSVSHGRWV*HPTNLQLANLS
Trigger: ACTCAGGTTTGCAAGTTGCAAGTTTGTAGGGTGCCACACCCACCGGCCGTGAGACACGCTTGTCCCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp TGGTGTGGCCTCGGGACAAGCGTGTCTCACGGCCGGTaGGTGTGGCACCCTACAAACTTGCAACTTGCAAAC +
Preference number: 6 (lower is better)
Translates to: WCGLGTSVSHGR*VWHPTNLQLAN
Trigger: GTTTGCAAGTTGCAAGTTTGTAGGGTGCCACACCCACCGGCCGTGAGACACGCTTGTCCCGAGGCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp AGCAGATCCACCTGCTGCGCCAGGTTCCTTCCCCTCTaGCCCGTCAGAAGCTGCTGTTTTCAAGGACGAGCC +
Preference number: 6 (lower is better)
Translates to: SRSTCCARFLPL*PVRSCCFQGRA
Trigger: GGCTCGTCCTTGAAAACAGCAGCTTCTGACGGGCAAGAGGGGAAGGAACCTGGCGCAGCAGGTGGATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp GACTTCCAAGGTGACACGGCGTCCATGCCCTTCTCGTaGCTCAACCCAGGAGAGGCCTGCAGGAACCGAACA +
Preference number: 6 (lower is better)
Translates to: DFQGDTASMPFS*LNPGEACRNRT
Trigger: TGTTCGGTTCCTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGACGCCGTGTCACCTTGGAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS TCA 72 bp CGACTATTCCCTAAGCGCTGCCTCCGCAGACAGAACTaGAGCCATCTTGGGCTTAAAACCCCGGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RLFPKRCLRRQN*SHLGLKTPASW
Trigger: CCAGCTGGCCGGGGTTTTAAGCCCAAGATGGCTTCAGTTCTGTCTGCGGAGGCAGCGCTTAGGGAATAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp ACTCAGTCTGCATGGAGATCCCAGGACAGTGACAGCTaGACAAACCCTTACCAACACGCTCGTCCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: TQSAWRSQDSDS*TNPYQHARPAP
Trigger: CGGCGCGGGACGAGCGTGTTGGTAAGGGTTTGTTCAGCTGTCACTGTCCTGGGATCTCCATGCAGACTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp AGGGAGGGGTACAGGGTGAAGAATAAGTCATCCAAGTaGCCCGTGATGGGCTTCTGGAGGCGAGGCTTTCGG +
Preference number: 6 (lower is better)
Translates to: REGYRVKNKSSK*PVMGFWRRGFR
Trigger: CCGAAAGCCTCGCCTCCAGAAGCCCATCACGGGGCACTTGGATGACTTATTCTTCACCCTGTACCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS GCA 72 bp ACACAGCACAGGAGCAAACACTCATGCACCCGGCCCTaGTGGGTCAGAACACTGTATCCAGTGGTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: TQHRSKHSCTRP*WVRTLYPVVRV
Trigger: GACTCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTTTGCTCCTGTGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 72 bp CATCCGGGAGAGACACAGCACAGGAGCAAACACTCATaGACCCGGCCCTGCTGGGTCAGAACACTGTATCCA +
Preference number: 6 (lower is better)
Translates to: HPGETQHRSKHS*TRPCWVRTLYP
Trigger: TGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTTTGCTCCTGTGCTGTGTCTCTCCCGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 72 bp CATCCCCATAAAGACGCAGCCTCCATGTCGCCCACATaGCCTACACTGTGCTTCTGCCTTCGGGCTACCAAC +
Preference number: 6 (lower is better)
Translates to: HPHKDAASMSPT*PTLCFCLRATN
Trigger: GTTGGTAGCCCGAAGGCAGAAGCACAGTGTAGGGCATGTGGGCGACATGGAGGCTGCGTCTTTATGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp TCCATGCCCTTCTCGTTGCTCAACCCAGGAGAGGCCTaGAGGAACCGAACAGCACAAGCAGGTCAGGAAGCA +
Preference number: 6 (lower is better)
Translates to: SMPFSLLNPGEA*RNRTAQAGQEA
Trigger: TGCTTCCTGACCTGCTTGTGCTGTTCGGTTCCTGCAGGCCTCTCCTGGGTTGAGCAACGAGAAGGGCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468253.1
CDS CCA 72 bp CTAATTACCGGTCCGTCCAGCCACTTGAGGACACACTaGAATGCCGTGGATTCCTTCCAAGGCTGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: LITGPSSHLRTH*NAVDSFQGWRA
Trigger: AGCGCGCCAGCCTTGGAAGGAATCCACGGCATTCCAGTGTGTCCTCAAGTGGCTGGACGGACCGGTAATTAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp CAGCACAGGAGCAAACACTCATGCACCCGGCCCTGCTaGGTCAGAACACTGTATCCAGTGGTCCGAGTCACA +
Preference number: 6 (lower is better)
Translates to: QHRSKHSCTRPC*VRTLYPVVRVT
Trigger: TGTGACTCGGACCACTGGATACAGTGTTCTGACCCAGCAGGGCCGGGTGCATGAGTGTTTGCTCCTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CAA 90 bp GCCACGCTGAGTGTTGGGATGGGCACGAGGCTTGTGAGCAGCTTCTaGTCCCTCCTTAGACAGCACACGTATCTCCACTGTTGCCAAGAC +
Preference number: 6 (lower is better)
Translates to: ATLSVGMGTRLVSSF*SLLRQHTYLHCCQD
Trigger: GTCTTGGCAACAGTGGAGATACGTGTGCTGTCTAAGGAGGGACAAGAAGCTGCTCACAAGCCTCGTGCCCATCCCAACACTCAGCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS TCA 72 bp CTTGGAAGAGGAGACCACTTTCCTGCTGAAGCTAGCTaGGCGCGTCAAGGCCACATCCATCTCAGGCACCAG +
Preference number: 6 (lower is better)
Translates to: LGRGDHFPAEAS*ARQGHIHLRHQ
Trigger: CTGGTGCCTGAGATGGATGTGGCCTTGACGCGCTCAGCTAGCTTCAGCAGGAAAGTGGTCTCCTCTTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS TCA 72 bp CAAGAGCCTGCTGCTTCACAGTCAAATGGGGCTGGGTaGGGCATCTTCATGGGCTCACGAGGAAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: QEPAASQSNGAG*GIFMGSRGSHS
Trigger: AGAGTGGCTTCCTCGTGAGCCCATGAAGATGCCTCACCCAGCCCCATTTGACTGTGAAGCAGCAGGCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp GAGAAGTCTCCTTCATCTGGACGGCAGCAGATCCGATaGGCAGCAGGGAGTCTCCGTCCCAGACGTCAATCT +
Preference number: 6 (lower is better)
Translates to: EKSPSSGRQQIR*AAGSLRPRRQS
Trigger: AGATTGACGTCTGGGACGGAGACTCCCTGCTGCTCATCGGATCTGCTGCCGTCCAGATGAAGGAGACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS GCA 72 bp ATTCTTACTTCTGGATCTCTGGGTCGCAAGGCGGGCTaGCTCACAAACTCTAACCTCGGCCTCTCGATGGCC +
Preference number: 6 (lower is better)
Translates to: ILTSGSLGRKAG*LTNSNLGLSMA
Trigger: GGCCATCGAGAGGCCGAGGTTAGAGTTTGTGAGGCAGCCCGCCTTGCGACCCAGAGATCCAGAAGTAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp ATTACACACTATAGGACAGGACAGGCTCGTCACAGGTaGTCAGCAAGACACCTGCTGGGGAAACGGACGCCG +
Preference number: 6 (lower is better)
Translates to: ITHYRTGQARHR*SARHLLGKRTP
Trigger: CGGCGTCCGTTTCCCCAGCAGGTGTCTTGCTGAGCACCTGTGACGAGCCTGTCCTGTCCTATAGTGTGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460696.1
CDS CCA 72 bp AAGAATAAGTCATCCAAGTGCCCCGTGATGGGCTTCTaGAGGCGAGGCTTTCGGAGAGCGTCGCCGGATTCT +
Preference number: 6 (lower is better)
Translates to: KNKSSKCPVMGF*RRGFRRASPDS
Trigger: AGAATCCGGCGACGCTCTCCGAAAGCCTCGCCTCCAGAAGCCCATCACGGGGCACTTGGATGACTTATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CCA 72 bp CTTCACAGTCAAATGGGGCTGGGTGAGGCATCTTCATaGGCTCACGAGGAAGCCACTCTGAGACGTGGTCAC +
Preference number: 6 (lower is better)
Translates to: LHSQMGLGEASS*AHEEATLRRGH
Trigger: GTGACCACGTCTCAGAGTGGCTTCCTCGTGAGCCCATGAAGATGCCTCACCCAGCCCCATTTGACTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GCCCACCCAACTATGGGATGGTACCTGTCACCGCCCTaGGGCTTTTGGAAGACTGCTGGTGATTTGAGGAAC +
Preference number: 6 (lower is better)
Translates to: AHPTMGWYLSPP*GFWKTAGDLRN
Trigger: GTTCCTCAAATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCCATAGTTGGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GGGCTGTCCCACGCTCTCACCAGCAACCTCTCTGCATaGTCGTGTTTATTTCCAAGGGGAGCTGACAAGGCA +
Preference number: 6 (lower is better)
Translates to: GLSHALTSNLSA*SCLFPRGADKA
Trigger: TGCCTTGTCAGCTCCCCTTGGAAATAAACACGACCATGCAGAGAGGTTGCTGGTGAGAGCGTGGGACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp GCACAAATGCAGAATTCCCTGGCTCAGCGCCATCCCTaGAGGCAGCTTGAAAGCTCACTCTGGGCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: AQMQNSLAQRHP*RQLESSLWAAV
Trigger: TACAGCTGCCCAGAGTGAGCTTTCAAGCTGCCTCCAGGGATGGCGCTGAGCCAGGGAATTCTGCATTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp GCTCCAAAAGCAACTATGGCAAAGGCACTGGCACGTTaGCCGCCTCCTACTGTCTGCGCACGAGCACAAATG +
Preference number: 6 (lower is better)
Translates to: APKATMAKALAR*PPPTVCARAQM
Trigger: CATTTGTGCTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTGCCTTTGCCATAGTTGCTTTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 72 bp GAGGCAGAGCACCGCCAACGAAGCTGTGTCCCAAAATaGACCACCCAGGGTACGCACAAAATGCTTGTGCCA +
Preference number: 6 (lower is better)
Translates to: EAEHRQRSCVPK*TTQGTHKMLVP
Trigger: TGGCACAAGCATTTTGTGCGTACCCTGGGTGGTTCATTTTGGGACACAGCTTCGTTGGCGGTGCTCTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp TGGAGAAGGTCTGCAGTCCCAAGTCAAAACTACTCCTaGCATGATCCCACCTCCCGACACCCTGTGTGCATG +
Preference number: 6 (lower is better)
Translates to: WRRSAVPSQNYS*HDPTSRHPVCM
Trigger: CATGCACACAGGGTGTCGGGAGGTGGGATCATGGCAGGAGTAGTTTTGACTTGGGACTGCAGACCTTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS GCA 72 bp TTTGACTTCAGCGCCCGGTACAAGGATGGGAACCAGTaGTCAGCCAGTGTGACGCGTTACTTGGACTCGAAG +
Preference number: 6 (lower is better)
Translates to: FDFSARYKDGNQ*SASVTRYLDSK
Trigger: CTTCGAGTCCAAGTAACGCGTCACACTGGCTGAGCACTGGTTCCCATCCTTGTACCGGGCGCTGAAGTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp CTGTTCACCTTGCCAGGAATTCTGAACACCGGCCTTTaGGGTTGGTGTGTACGTCACTCACCCCACAATGGC +
Preference number: 6 (lower is better)
Translates to: LFTLPGILNTGL*GWCVRHSPHNG
Trigger: GCCATTGTGGGGTGAGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGTGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp AAACTGAAGCTCCAAAAGCAACTATGGCAAAGGCACTaGCACGTTGGCCGCCTCCTACTGTCTGCGCACGAG +
Preference number: 6 (lower is better)
Translates to: KLKLQKQLWQRH*HVGRLLLSAHE
Trigger: CTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTGCCTTTGCCATAGTTGCTTTTGGAGCTTCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp GGCACTCACAGTTCGCTGCACATGGATTCTTACTTCTaGATCTCTGGGTCGCAAGGCGGGCTGCCTCACAAA +
Preference number: 6 (lower is better)
Translates to: GTHSSLHMDSYF*ISGSQGGLPHK
Trigger: TTTGTGAGGCAGCCCGCCTTGCGACCCAGAGATCCAGAAGTAAGAATCCATGTGCAGCGAACTGTGAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp CTTGCAGATGAGCAGCCAACCAGACACAAATGCCACTaGCAGGGTTCCCACTTCTCCAAACAGCACAGTCGC +
Preference number: 6 (lower is better)
Translates to: LADEQPTRHKCH*QGSHFSKQHSR
Trigger: GCGACTGTGCTGTTTGGAGAAGTGGGAACCCTGCCAGTGGCATTTGTGTCTGGTTGGCTGCTCATCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489180.6
ENST00000622020.4
CDS CAA 72 bp CACCTTGCCAGGAATTCTGAACACCGGCCTTTGGGGTaGGTGTGTACGTCACTCACCCCACAATGGCACATC +
Preference number: 6 (lower is better)
Translates to: HLARNSEHRPLG*VCTSLTPQWHI
Trigger: GATGTGCCATTGTGGGGTGAGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 72 bp AGCTCCAAAAGCAACTATGGCAAAGGCACTGGCACGTaGGCCGCCTCCTACTGTCTGCGCACGAGCACAAAT +
Preference number: 6 (lower is better)
Translates to: SSKSNYGKGTGT*AASYCLRTSTN
Trigger: ATTTGTGCTCGTGCGCAGACAGTAGGAGGCGGCCAACGTGCCAGTGCCTTTGCCATAGTTGCTTTTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp CTGGCCTTCCTGCCACCTCCTGCAGACGAGCTGTTCTaGGTCATCTGTCCCTGCTTCAGTCTTTGTAAGCTC +
Preference number: 6 (lower is better)
Translates to: LAFLPPPADELF*VICPCFSLCKL
Trigger: GAGCTTACAAAGACTGAAGCAGGGACAGATGACCAAGAACAGCTCGTCTGCAGGAGGTGGCAGGAAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 90 bp CCCATCCTCAGAAGCACTGCAGGAAATCTCCGAGCTCACACCAGTTaGAAAGGATTCTCACAGGGCTTGGGGATCCGACTTAGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: PILRSTAGNLRAHTS*KGFSQGLGIRLRRG
Trigger: TCCCCTCCTAAGTCGGATCCCCAAGCCCTGTGAGAATCCTTTCAAACTGGTGTGAGCTCGGAGATTTCCTGCAGTGCTTCTGAGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp CAGAGCTCCTGTCACTGTTCACCTTGCCAGGAATTCTaGACACCGGCCTTTGGGGTTGGTGTGTACGTCACT +
Preference number: 6 (lower is better)
Translates to: QSSCHCSPCQEF*TPAFGVGVYVT
Trigger: AGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGTGAACAGTGACAGGAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp CCTGTCACCGCCCTGGGGCTTTTGGAAGACTGCTGGTaGTTTGAGGAACTCGCTCCTAAATGCAGGCTAACT +
Preference number: 6 (lower is better)
Translates to: PVTALGLLEDCW*FEELAPKCRLT
Trigger: AGTTAGCCTGCATTTAGGAGCGAGTTCCTCAAATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp CCCGGTACAAGGATGGGAACCAGTGCTCAGCCAGTGTaGCGCGTTACTTGGACTCGAAGGCACACTTATTTC +
Preference number: 6 (lower is better)
Translates to: PGTRMGTSAQPV*RVTWTRRHTYF
Trigger: GAAATAAGTGTGCCTTCGAGTCCAAGTAACGCGTCACACTGGCTGAGCACTGGTTCCCATCCTTGTACCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp CGCCTGGATTTTGGAAAGGACCTGAAAGCCAGATACTaGATCGCAGCTGGCGACACCAAAGACATTGGCGGG +
Preference number: 6 (lower is better)
Translates to: RLDFGKDLKARY*IAAGDTKDIGG
Trigger: CCCGCCAATGTCTTTGGTGTCGCCAGCTGCGATTCAGTATCTGGCTTTCAGGTCCTTTCCAAAATCCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 72 bp CACAGTGACTCAGTCTGCATGGAGATCCCAGGACAGTaGCAGCTGAACAAACCCTTACCAACACGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: HSDSVCMEIPGQ*QLNKPLPTRSS
Trigger: GGACGAGCGTGTTGGTAAGGGTTTGTTCAGCTGTCACTGTCCTGGGATCTCCATGCAGACTGAGTCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp TCCCAGGACCACCTATATAGGGAGGGAGCTCAAGAGTaGGGCTCATGCTTTTTGCAGCTCCAATCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: SQDHLYREGAQE*GSCFLQLQSAE
Trigger: CTCTGCAGATTGGAGCTGCAAAAAGCATGAGCCGCACTCTTGAGCTCCCTCCCTATATAGGTGGTCCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506941.1
CDS CCA 72 bp ACCTTGCCAGGAATTCTGAACACCGGCCTTTGGGGTTaGTGTGTACGTCACTCACCCCACAATGGCACATCT +
Preference number: 6 (lower is better)
Translates to: TLPGILNTGLWG*CVRHSPHNGTS
Trigger: AGATGTGCCATTGTGGGGTGAGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp ACTATGGGATGGTACCTGTCACCGCCCTGGGGCTTTTaGAAGACTGCTGGTGATTTGAGGAACTCGCTCCTA +
Preference number: 6 (lower is better)
Translates to: TMGWYLSPPWGF*KTAGDLRNSLL
Trigger: TAGGAGCGAGTTCCTCAAATCACCAGCAGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp CTACTAAAGATACAACGGGCCCACCCAACTATGGGATaGTACCTGTCACCGCCCTGGGGCTTTTGGAAGACT +
Preference number: 6 (lower is better)
Translates to: LLKIQRAHPTMG*YLSPPWGFWKT
Trigger: AGTCTTCCAAAAGCCCCAGGGCGGTGACAGGTACCATCCCATAGTTGGGTGGGCCCGTTGTATCTTTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp TGGAAAGGACCTGAAAGCCAGATACTGAATCGCAGCTaGCGACACCAAAGACATTGGCGGGACAGCAGACCA +
Preference number: 6 (lower is better)
Translates to: WKGPESQILNRS*RHQRHWRDSRP
Trigger: TGGTCTGCTGTCCCGCCAATGTCTTTGGTGTCGCCAGCTGCGATTCAGTATCTGGCTTTCAGGTCCTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp CAGTTCGCTGCACATGGATTCTTACTTCTGGATCTCTaGGTCGCAAGGCGGGCTGCCTCACAAACTCTAACC +
Preference number: 6 (lower is better)
Translates to: QFAAHGFLLLDL*VARRAASQTLT
Trigger: GGTTAGAGTTTGTGAGGCAGCCCGCCTTGCGACCCAGAGATCCAGAAGTAAGAATCCATGTGCAGCGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp AGTGTTGGGATGGGCACGAGGCTTGTGAGCAGCTTCTaGTCCCTCCTTAGACAGCACACGTATCTCCACTGT +
Preference number: 6 (lower is better)
Translates to: SVGMGTRLVSSF*SLLRQHTYLHC
Trigger: ACAGTGGAGATACGTGTGCTGTCTAAGGAGGGACAAGAAGCTGCTCACAAGCCTCGTGCCCATCCCAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378161.5
CDS CAA 72 bp ACTGTTCACCTTGCCAGGAATTCTGAACACCGGCCTTaGGGGTTGGTGTGTACGTCACTCACCCCACAATGG +
Preference number: 6 (lower is better)
Translates to: TVHLARNSEHRP*GLVCTSLTPQW
Trigger: CCATTGTGGGGTGAGTGACGTACACACCAACCCCAAAGGCCGGTGTTCAGAATTCCTGGCAAGGTGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 72 bp GATGGGAACCAGTGCTCAGCCAGTGTGACGCGTTACTaGGACTCGAAGGCACACTTATTTCCGAGACTGAGC +
Preference number: 6 (lower is better)
Translates to: DGNQCSASVTRY*DSKAHLFPRLS
Trigger: GCTCAGTCTCGGAAATAAGTGTGCCTTCGAGTCCAAGTAACGCGTCACACTGGCTGAGCACTGGTTCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 90 bp CAAGCCAGGCTGGCCTTCCTGCCACCTCCTGCAGACGAGCTGTTCTaGGTCATCTGTCCCTGCTTCAGTCTTTGTAAGCTCTTTCAAAAC +
Preference number: 6 (lower is better)
Translates to: QARLAFLPPPADELF*VICPCFSLCKLFQN
Trigger: GTTTTGAAAGAGCTTACAAAGACTGAAGCAGGGACAGATGACCAAGAACAGCTCGTCTGCAGGAGGTGGCAGGAAGGCCAGCCTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 90 bp CAAAATGCTTGTGCCATCAATTTCCTTAATTCCGACGAGGCAGTGTaGAGTGCCCTCGGGCCTGGGATGTCCTCACCATTTTCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: QNACAINFLNSDEAV*SALGPGMSSPFSRE
Trigger: CTCCCGGGAAAATGGTGAGGACATCCCAGGCCCGAGGGCACTCAACACTGCCTCGTCGGAATTAAGGAAATTGATGGCACAAGCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 90 bp GCGGGCTGCCTCACAAACTCTAACCTCGGCCTCTCGATGGCCACATaGATCAAGGATAGGCCTGTGTGCATTTACACGTGCAAATGTCTG +
Preference number: 6 (lower is better)
Translates to: AGCLTNSNLGLSMAT*IKDRPVCIYTCKCL
Trigger: CAGACATTTGCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGAGAGGCCGAGGTTAGAGTTTGTGAGGCAGCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 72 bp AGAAGAGCTTCACTTCACAGACAGATGGAAAGCTGGTaGCGCAGCAGCGAACAATCCCTGCTGCCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: RRASLHRQMESW*RSSEQSLLPSK
Trigger: CTTTGAGGGCAGCAGGGATTGTTCGCTGCTGCGTCACCAGCTTTCCATCTGTCTGTGAAGTGAAGCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 72 bp GTGCCATCAATTTCCTTAATTCCGACGAGGCAGTGTTaGGTGCCCTCGGGCCTGGGATGTCCTCACCATTTT +
Preference number: 6 (lower is better)
Translates to: VPSISLIPTRQC*VPSGLGCPHHF
Trigger: AAAATGGTGAGGACATCCCAGGCCCGAGGGCACTCAACACTGCCTCGTCGGAATTAAGGAAATTGATGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp AGCCTTCACCAGAGTTGTGTTCATAACAGAAGGCTTTaGCAAGCAAGTGGTGTGGCCTCGGGACAAGCGTGT +
Preference number: 6 (lower is better)
Translates to: SLHQSCVHNRRL*QASGVASGQAC
Trigger: ACACGCTTGTCCCGAGGCCACACCACTTGCTTGCCAAAGCCTTCTGTTATGAACACAACTCTGGTGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CCA 72 bp GGCAGCCTCCGTTTCCTGGTGACGAATGAAAGCGTGTaGCACTCACAGTTCGCTGCACATGGATTCTTACTT +
Preference number: 6 (lower is better)
Translates to: GSLRFLVTNESV*HSQFAAHGFLL
Trigger: AAGTAAGAATCCATGTGCAGCGAACTGTGAGTGCCACACGCTTTCATTCGTCACCAGGAAACGGAGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp TTGTCCTGGGAAGCAGAGATAGGAGAGTCCGGCTGGTaGCTGAAGATCCGAAGAATTCCAAACCCACAGGAC +
Preference number: 6 (lower is better)
Translates to: LSWEAEIGESGW*LKIRRIPNPQD
Trigger: GTCCTGTGGGTTTGGAATTCTTCGGATCTTCAGCAACCAGCCGGACTCTCCTATCTCTGCTTCCCAGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CAA 72 bp TGTGCCATCAATTTCCTTAATTCCGACGAGGCAGTGTaGAGTGCCCTCGGGCCTGGGATGTCCTCACCATTT +
Preference number: 6 (lower is better)
Translates to: CAINFLNSDEAV*SALGPGMSSPF
Trigger: AAATGGTGAGGACATCCCAGGCCCGAGGGCACTCAACACTGCCTCGTCGGAATTAAGGAAATTGATGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 90 bp CGGTACAAGGATGGGAACCAGTGCTCAGCCAGTGTGACGCGTTACTaGGACTCGAAGGCACACTTATTTCCGAGACTGAGCTGTCTAACA +
Preference number: 6 (lower is better)
Translates to: RYKDGNQCSASVTRY*DSKAHLFPRLSCLT
Trigger: TGTTAGACAGCTCAGTCTCGGAAATAAGTGTGCCTTCGAGTCCAAGTAACGCGTCACACTGGCTGAGCACTGGTTCCCATCCTTGTACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp ATCAAAGAAAGACACTCGCAGATGGCATTCAACCTCTaGCAGTACCTCCAGCACGCCCTGCCTAATTACCGG +
Preference number: 6 (lower is better)
Translates to: IKERHSQMAFNL*QYLQHALPNYR
Trigger: CCGGTAATTAGGCAGGGCGTGCTGGAGGTACTGTCAGAGGTTGAATGCCATCTGCGAGTGTCTTTCTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS TCA 72 bp GAAGCACTGCAGGAAATCTCCGAGCTCACACCAGTTTaGAAGGATTCTCACAGGGCTTGGGGATCCGACTTA +
Preference number: 6 (lower is better)
Translates to: EALQEISELTPV*KDSHRAWGSDL
Trigger: TAAGTCGGATCCCCAAGCCCTGTGAGAATCCTTTCAAACTGGTGTGAGCTCGGAGATTTCCTGCAGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CCA 72 bp CTTTTGTCCTGGGAAGCAGAGATAGGAGAGTCCGGCTaGTTGCTGAAGATCCGAAGAATTCCAAACCCACAG +
Preference number: 6 (lower is better)
Translates to: LLSWEAEIGESG*LLKIRRIPNPQ
Trigger: CTGTGGGTTTGGAATTCTTCGGATCTTCAGCAACCAGCCGGACTCTCCTATCTCTGCTTCCCAGGACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000478423.6
ENST00000489180.6
ENST00000622020.4
CDS CAA 72 bp AGAAGCACTGCAGGAAATCTCCGAGCTCACACCAGTTaGAAAGGATTCTCACAGGGCTTGGGGATCCGACTT +
Preference number: 6 (lower is better)
Translates to: RSTAGNLRAHTS*KGFSQGLGIRL
Trigger: AAGTCGGATCCCCAAGCCCTGTGAGAATCCTTTCAAACTGGTGTGAGCTCGGAGATTTCCTGCAGTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS CAA 72 bp CTCACAAACTCTAACCTCGGCCTCTCGATGGCCACATaGATCAAGGATAGGCCTGTGTGCATTTACACGTGC +
Preference number: 6 (lower is better)
Translates to: LTNSNLGLSMAT*IKDRPVCIYTC
Trigger: GCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGAGAGGCCGAGGTTAGAGTTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 90 bp GAAAAGCCCTGGGCACAACACCCTTTCCCACACTCAGGAGAAACTTaGCTAAATCTCCAGCTACTAAAGATACAACGGGCCCACCCAACT +
Preference number: 6 (lower is better)
Translates to: EKPWAQHPFPHSGET*LNLQLLKIQRAHPT
Trigger: AGTTGGGTGGGCCCGTTGTATCTTTAGTAGCTGGAGATTTAGCAAAGTTTCTCCTGAGTGTGGGAAAGGGTGTTGTGCCCAGGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp TCACAAACTCTAACCTCGGCCTCTCGATGGCCACATTaGTCAAGGATAGGCCTGTGTGCATTTACACGTGCA +
Preference number: 6 (lower is better)
Translates to: SQTLTSASRWPH*SRIGLCAFTRA
Trigger: TGCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGAGAGGCCGAGGTTAGAGTTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS TCA 72 bp CGTCTACACTGCATACGATCACTGCATAGACATCGATaGTTCCGGAACCTCAGTCACTGGGAGACTGAGAAG +
Preference number: 6 (lower is better)
Translates to: RLHCIRSLHRHR*FRNLSHWETEK
Trigger: CTTCTCAGTCTCCCAGTGACTGAGGTTCCGGAATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS GCA 72 bp CTCTCGATGGCCACATTGATCAAGGATAGGCCTGTGTaGATTTACACGTGCAAATGTCTGGCTCCACACACA +
Preference number: 6 (lower is better)
Translates to: LSMATLIKDRPV*IYTCKCLAPHT
Trigger: TGTGTGTGGAGCCAGACATTTGCACGTGTAAATGCACACAGGCCTATCCTTGATCAATGTGGCCATCGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS GCA 72 bp CGCTTTGCCACACTCGTCTACACTGCATACGATCACTaGATAGACATCGATGATTCCGGAACCTCAGTCACT +
Preference number: 6 (lower is better)
Translates to: RFATLVYTAYDH*IDIDDSGTSVT
Trigger: AGTGACTGAGGTTCCGGAATCATCGATGTCTATGCAGTGATCGTATGCAGTGTAGACGAGTGTGGCAAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466897.1
CDS GCA 72 bp ATAGGGAGGGAGCTCAAGAGTGCGGCTCATGCTTTTTaGAGCTCCAATCTGCAGAGTTCTGAGATCCAGATA +
Preference number: 6 (lower is better)
Translates to: IGRELKSAAHAF*SSNLQSSEIQI
Trigger: TATCTGGATCTCAGAACTCTGCAGATTGGAGCTGCAAAAAGCATGAGCCGCACTCTTGAGCTCCCTCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506941.1
CDS TCA 72 bp TGGTTTTCCACGTCCTCCCAAAGAAGTGCCGGTAGGTaGCATCAAAGAAAGACACTCGCAGATGGCATTCAA +
Preference number: 6 (lower is better)
Translates to: WFSTSSQRSAGR*HQRKTLADGIQ
Trigger: TTGAATGCCATCTGCGAGTGTCTTTCTTTGATGTCACCTACCGGCACTTCTTTGGGAGGACGTGGAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378156.9
ENST00000378169.7
ENST00000489180.6
ENST00000622020.4
CDS TCA 72 bp CACTTATTTCCGAGACTGAGCTGTCTAACATTACCATaGAAAGCCCTGGGCACAACACCCTTTCCCACACTC +
Preference number: 6 (lower is better)
Translates to: HLFPRLSCLTLP*KALGTTPFPTL
Trigger: GAGTGTGGGAAAGGGTGTTGTGCCCAGGGCTTTTCATGGTAATGTTAGACAGCTCAGTCTCGGAAATAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS GCA 72 bp AGATGGAAAGCTGGTGACGCAGCAGCGAACAATCCCTaGTGCCCTCAAAGAACTCACATTCTCCTAATTCTT +
Preference number: 6 (lower is better)
Translates to: RWKAGDAAANNP*CPQRTHILLIL
Trigger: AAGAATTAGGAGAATGTGAGTTCTTTGAGGGCAGCAGGGATTGTTCGCTGCTGCGTCACCAGCTTTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470763.1
CDS CAA 72 bp TGGGCACAACACCCTTTCCCACACTCAGGAGAAACTTaGCTAAATCTCCAGCTACTAAAGATACAACGGGCC +
Preference number: 6 (lower is better)
Translates to: WAQHPFPHSGET*LNLQLLKIQRA
Trigger: GGCCCGTTGTATCTTTAGTAGCTGGAGATTTAGCAAAGTTTCTCCTGAGTGTGGGAAAGGGTGTTGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378161.5
ENST00000460696.1
CDS TCA 72 bp TCTTCTGTTCACAACATAGGGTACTTCAACTTGTTTTaGAAATCAGTCTATGTTCCTCCTGACCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SSVHNIGYFNLF*KSVYVPPDLLS
Trigger: GGAGAGAAGGTCAGGAGGAACATAGACTGATTTTCAAAACAAGTTGAAGTACCCTATGTTGTGAACAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489180.6