RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPFFR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000148734

Ensembl transcript IDs: ENST00000277942.7

Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCTGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTaGCCGTGGGCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGG +
Preference number: 1 (lower is better)
Translates to: NLEVEDGVSGMVHTT*PWAPRLHKAPSGSR
Trigger: CCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCAGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp GAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTaGGCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAG +
Preference number: 1 (lower is better)
Translates to: EVEDGVSGMVHTTCP*APRLHKAPSGSRCQ
Trigger: CTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp CTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCTaGGCAGACTGTGGTTTGTGGGGTGCAGGCCCGGCATCCGCCTCC +
Preference number: 1 (lower is better)
Translates to: LMSPPGPKRDSSAQG*ADCGLWGAGPASAS
Trigger: GGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp TCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCTGGGCAGACTGTaGTTTGTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTG +
Preference number: 1 (lower is better)
Translates to: SRPQERLLSTGLGRL*FVGCRPGIRLQLTL
Trigger: CAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp GAGAGACTCCTCAGCACAGGGCTGGGCAGACTGTGGTTTGTGGGGTaGAGGCCCGGCATCCGCCTCCAGCTCACATTGGTCTGTTGGGTG +
Preference number: 1 (lower is better)
Translates to: ERLLSTGLGRLWFVG*RPGIRLQLTLVCWV
Trigger: CACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp CCCAAGAGAGACTCCTCAGCACAGGGCTGGGCAGACTGTGGTTTGTaGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTGGTCTGTT +
Preference number: 1 (lower is better)
Translates to: PKRDSSAQGWADCGL*GAGPASASSSHWSV
Trigger: AACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCTCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp TCATCAGTGGAGAGCCACAATGAGGGTGACCACTCATGCCGCACATaGCAGGACAGGACACAGAGTCCCTCCAGGAGGCCCTCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: SSVESHNEGDHSCRT*QDRTQSPSRRPSGW
Trigger: CCACCCAGAGGGCCTCCTGGAGGGACTCTGTGTCCTGTCCTGCCATGTGCGGCATGAGTGGTCACCCTCATTGTGGCTCTCCACTGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp AGAGGCCATTCATCAGTGGAGAGCCACAATGAGGGTGACCACTCATaGCGCACATGGCAGGACAGGACACAGAGTCCCTCCAGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: RGHSSVESHNEGDHS*RTWQDRTQSPSRRP
Trigger: GGGCCTCCTGGAGGGACTCTGTGTCCTGTCCTGCCATGTGCGGCATGAGTGGTCACCCTCATTGTGGCTCTCCACTGATGAATGGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp CCTCCTCTGTTCTCTAAGCTCAGACCCAGAGGGCAAGACCTAGAGTaGCCTGCAACTGAGGCAGCCTCCCCAAGGCTCGTTCTGAAGCTG +
Preference number: 1 (lower is better)
Translates to: PPLFSKLRPRGQDLE*PATEAASPRLVLKL
Trigger: CAGCTTCAGAACGAGCCTTGGGGAGGCTGCCTCAGTTGCAGGGCACTCTAGGTCTTGCCCTCTGGGTCTGAGCTTAGAGAACAGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp GCAGGCCCGGCATCCGCCTCCAGCTCACATTGGTCTGTTGGGTGCTaGCTGGTCTTGGTAAAGTCAAGAGGCCATTCATCAGTGGAGAGC +
Preference number: 1 (lower is better)
Translates to: AGPASASSSHWSVGC*LVLVKSRGHSSVES
Trigger: GCTCTCCACTGATGAATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp GGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTGGTCTGTTGGGTaGTGCCTGGTCTTGGTAAAGTCAAGAGGCCATTCATCAGTGGAG +
Preference number: 1 (lower is better)
Translates to: GAGPASASSSHWSVG*CLVLVKSRGHSSVE
Trigger: CTCCACTGATGAATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp GTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTGGTCTGTTaGGTGCTGCCTGGTCTTGGTAAAGTCAAGAGGCCATTCATCAGT +
Preference number: 1 (lower is better)
Translates to: VGCRPGIRLQLTLVC*VLPGLGKVKRPFIS
Trigger: ACTGATGAATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp TGTGGTTTGTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTaGTCTGTTGGGTGCTGCCTGGTCTTGGTAAAGTCAAGAGGCCAT +
Preference number: 1 (lower is better)
Translates to: CGLWGAGPASASSSH*SVGCCLVLVKSRGH
Trigger: ATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp CTTCCTTTGCCAACTTCGCCCTCCATTCCAATGCAGATCAGCTCATaGGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: LPLPTSPSIPMQISS*VLQAPRETPQHRAG
Trigger: CCCAGCCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCATTGGAATGGAGGGCGAAGTTGGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp CCTCATCCATCACCCCCAGAACCAGGACAAGGTCATGATGGCTCTTaGCAGCCTGCTCAGCACCAGGGCAAGAACAACTCAGGCTGGACA +
Preference number: 1 (lower is better)
Translates to: PHPSPPEPGQGHDGS*QPAQHQGKNNSGWT
Trigger: TGTCCAGCCTGAGTTGTTCTTGCCCTGGTGCTGAGCAGGCTGCCAAGAGCCATCATGACCTTGTCCTGGTTCTGGGGGTGATGGATGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp CACAAACAACTCAAGGCAGGACGCTACAGCCAGTTCAGCAGCTTTTaGTCCTTCAGTGACCACAGTGCAGGGGAGCCCGTGGCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: HKQLKAGRYSQFSSF*SFSDHSAGEPVAAL
Trigger: CAAAGCAGCCACGGGCTCCCCTGCACTGTGGTCACTGAAGGAGCAAAAGCTGCTGAACTGGCTGTAGCGTCCTGCCTTGAGTTGTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp ATGCTCAGTGTCAACAGGCCTCTGGCCCTTTTCCCCCATCACGCATaGCGTTCATCTCCGAACTTGCCGCTTATGAAAGGGCAGTCACCT +
Preference number: 1 (lower is better)
Translates to: MLSVNRPLALFPHHA*RSSPNLPLMKGQSP
Trigger: AGGTGACTGCCCTTTCATAAGCGGCAAGTTCGGAGATGAACGGCATGCGTGATGGGGGAAAAGGGCCAGAGGCCTGTTGACACTGAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp TTTTCCCCCATCACGCATGCCGTTCATCTCCGAACTTGCCGCTTATaGAAGGGCAGTCACCTTAGGAAACCCAGCCAACCTGGAGGTGGA +
Preference number: 1 (lower is better)
Translates to: FSPITHAVHLRTCRL*KGSHLRKPSQPGGG
Trigger: TCCACCTCCAGGTTGGCTGGGTTTCCTAAGGTGACTGCCCTTTCATAAGCGGCAAGTTCGGAGATGAACGGCATGCGTGATGGGGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp CCTGTGAAAGGACCCTCCAAGGCAATCCCATGTGCTCCCGTCTCCTaGAAAGAAGCCACATTTCTTCAAGTTGATGCAGGGGTGTTGGGG +
Preference number: 1 (lower is better)
Translates to: PVKGPSKAIPCAPVS*KEATFLQVDAGVLG
Trigger: CCCCAACACCCCTGCATCAACTTGAAGAAATGTGGCTTCTTTCCAGGAGACGGGAGCACATGGGATTGCCTTGGAGGGTCCTTTCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp GGAGAGACCACAGCAGCTTGGGGAATGGCAAAAACCTGGACTTTGTaGTCAGATAGACTAAGGTTTGAGTCTCACCTTCAGGACCTCCTG +
Preference number: 1 (lower is better)
Translates to: GETTAAWGMAKTWTL*SDRLRFESHLQDLL
Trigger: CAGGAGGTCCTGAAGGTGAGACTCAAACCTTAGTCTATCTGACCACAAAGTCCAGGTTTTTGCCATTCCCCAAGCTGCTGTGGTCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp GGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTaGTTTTCGCTTCTTCCTAGCTGCCTAATTAGGACTTACTCAGTT +
Preference number: 1 (lower is better)
Translates to: GLPHMDTKHQGTGRL*FSLLPSCLIRTYSV
Trigger: AACTGAGTAAGTCCTAATTAGGCAGCTAGGAAGAAGCGAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp TCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATaGCACATGACACTGATACAGTACCAGAAATGCATGGCACCAGCT +
Preference number: 1 (lower is better)
Translates to: SQQIAQNQLGTLWPI*HMTLIQYQKCMAPA
Trigger: AGCTGGTGCCATGCATTTCTGGTACTGTATCAGTGTCATGTGTCATATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp AGAGAAGACAACCTATCTCCAAAGCGTTGTGACAATTCAGTGAGATaGTGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: REDNLSPKRCDNSVR*CLSSPPHRASWFLP
Trigger: GGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACTGAATTGTCACAACGCTTTGGAGATAGGTTGTCTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp TTTGCTCCTTCAGTGACCACAGTGCAGGGGAGCCCGTGGCTGCTTTaGGGGCTTGATGTGGTATTGAGTCAAACTAAATTTAAACCTTTT +
Preference number: 1 (lower is better)
Translates to: FAPSVTTVQGSPWLL*GLDVVLSQTKFKPF
Trigger: AAAAGGTTTAAATTTAGTTTGACTCAATACCACATCAAGCCCTCAAAGCAGCCACGGGCTCCCCTGCACTGTGGTCACTGAAGGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp CAGTCAAAACACAGAAATGTAGATCGCTCAGTCACTGAAACGGATTaGCTTGGCTGTTCTAACTTCCACACCGAAAGGAAGACAGGGTGG +
Preference number: 1 (lower is better)
Translates to: QSKHRNVDRSVTETD*LGCSNFHTERKTGW
Trigger: CCACCCTGTCTTCCTTTCGGTGTGGAAGTTAGAACAGCCAAGTCAATCCGTTTCAGTGACTGAGCGATCTACATTTCTGTGTTTTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp CCAGCCATAGGGATAGGCATTTTGGGTTTGAGACGGCCCTTTCTCTaGCTTACTTTTAGAGCCTGGAGTCAGACTTCTTCACAACAAATA +
Preference number: 1 (lower is better)
Translates to: PAIGIGILGLRRPFL*LTFRAWSQTSSQQI
Trigger: TATTTGTTGTGAAGAAGTCTGACTCCAGGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTATGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp CAGTGCAGGGGAGCCCGTGGCTGCTTTGAGGGCTTGATGTGGTATTaGGTCAAACTAAATTTAAACCTTTTACCTAAACTGCTGGTATTC +
Preference number: 1 (lower is better)
Translates to: QCRGARGCFEGLMWY*VKLNLNLLPKLLVF
Trigger: GAATACCAGCAGTTTAGGTAAAAGGTTTAAATTTAGTTTGACTCAATACCACATCAAGCCCTCAAAGCAGCCACGGGCTCCCCTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp GAGATGATAAAAACCACACAGGTATTGGAGTCAGATAGCTTCACATaGCATTTCCACCTGAGAAACTTGGGTGAGTCACATCTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: EMIKTTQVLESDSFT*HFHLRNLGESHLSR
Trigger: CCTGGAGAGATGTGACTCACCCAAGTTTCTCAGGTGGAAATGGCATGTGAAGCTATCTGACTCCAATACCTGTGTGGTTTTTATCATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp CCCCACATACCCACAATGTCTCACTGCTTCATTAAAGCATTGTCATaGCTGTTATCACTCAGATCTGAATGGGCAGGTATAGCCTCTGAT +
Preference number: 1 (lower is better)
Translates to: PHIPTMSHCFIKALS*LLSLRSEWAGIASD
Trigger: ATCAGAGGCTATACCTGCCCATTCAGATCTGAGTGATAACAGGCATGACAATGCTTTAATGAAGCAGTGAGACATTGTGGGTATGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp TTACCAGCTCTCCCGTCATCCCCACCTTCCTTGAAAGGCAGCATGTaGGGTGGGAAGAACAATCAGAAGACAAATTTTAATCTAAATCCT +
Preference number: 1 (lower is better)
Translates to: LPALPSSPPSLKGSM*GGKNNQKTNFNLNP
Trigger: AGGATTTAGATTAAAATTTGTCTTCTGATTGTTCTTCCCACCCCACATGCTGCCTTTCAAGGAAGGTGGGGATGACGGGAGAGCTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 90 bp CAAAAAGGTACAGAGCTTAATAGCAATCCTTTGTCCATCCAGCTCTaGGCTTGGCTCTCGCCTTGCTTTTTGGATGAATACACAGTAGAC +
Preference number: 1 (lower is better)
Translates to: QKGTELNSNPLSIQL*AWLSPCFLDEYTVD
Trigger: GTCTACTGTGTATTCATCCAAAAAGCAAGGCGAGAGCCAAGCCCAGAGCTGGATGGACAAAGGATTGCTATTAAGCTCTGTACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp ACATTAATTTGGTTGCTTGCACATGACAACAGCATCATTTATTGGTaGCAGGATTCAAAGACCTGGGCATTGCAGCTAGCAGGAGAACAC +
Preference number: 1 (lower is better)
Translates to: TLIWLLAHDNSIIYW*QDSKTWALQLAGEH
Trigger: GTGTTCTCCTGCTAGCTGCAATGCCCAGGTCTTTGAATCCTGTCACCAATAAATGATGCTGTTGTCATGTGCAAGCAACCAAATTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 90 bp ACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTaGTTCATTAAAGCATTGTCATGCCTGTTATCACTCAGATCTGAA +
Preference number: 1 (lower is better)
Translates to: TSTKKRTPHIPTMSH*FIKALSCLLSLRSE
Trigger: TTCAGATCTGAGTGATAACAGGCATGACAATGCTTTAATGAAGCAGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp GATACATGCTACAGCATGAATGAATCTTGCAAACATCATTTTAAGTaGAAGAAACCAGACTCGGCTGCAAACTGTCTGATTCCATCTACA +
Preference number: 1 (lower is better)
Translates to: DTCYSMNESCKHHFK*KKPDSAANCLIPST
Trigger: TGTAGATGGAATCAGACAGTTTGCAGCCGAGTCTGGTTTCTTTCACTTAAAATGATGTTTGCAAGATTCATTCATGCTGTAGCATGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 90 bp AACATCATTTTAAGTGAAAGAAACCAGACTCGGCTGCAAACTGTCTaGTTCCATCTACATGACATTCTGAAATCAGATCATCGTTTTCTG +
Preference number: 1 (lower is better)
Translates to: NIILSERNQTRLQTV*FHLHDILKSDHRFL
Trigger: CAGAAAACGATGATCTGATTTCAGAATGTCATGTAGATGGAATCAGACAGTTTGCAGCCGAGTCTGGTTTCTTTCACTTAAAATGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp GGCCCCAAGAGAGACTCCTCAGCACAGGGCTGGGCAGACTGTGGTTaGTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTGGTCT +
Preference number: 2 (lower is better)
Translates to: GPKRDSSAQGWADCG*WGAGPASASSSHWS
Trigger: AGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCTCTTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCGCCCCTCTGTGGCCCTaGAAACTTGGCCCCTTTGAG +
Preference number: 2 (lower is better)
Translates to: WRWRMACQEWSTPLARGRAPLWP*KLGPFE
Trigger: CTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGGC...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCGGGACAGGCCGGCTTTaGTTTTCGCTTCTTCCTAGC +
Preference number: 2 (lower is better)
Translates to: WRWRMACQEWSTPLARGRGTGRL*FSLLPS
Trigger: GCTAGGAAGAAGCGAAAAGCAAAGCCGGCCTGTCCC...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCAATCCTGCCCCTCTGTaGCCCTGGAAACTTGGCCCC +
Preference number: 2 (lower is better)
Translates to: APRLHKAPSGSRCQNIGINPAPL*PWKLGP
Trigger: GGGGCCAAGTTTCCAGGGCCACAGAGGGGCAGGATT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp CTGTGGTTTGTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATaGGTCTGTTGGGTGCTGCCTGGTCTTGGTAAAGTCAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LWFVGCRPGIRLQLT*VCWVLPGLGKVKRP
Trigger: TGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCGGCTGCAGCTTCAGTTaGCCAACTTCTCCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIGCSFS*PTSPSQ
Trigger: CTGGGAGGGAGAAGTTGGTCAACTGAAGCTGCAGCC...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGAGGGTGACCACTCATaGCGCACATGGCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGEGDHS*RTWQDR
Trigger: CCTGTCCTGCCATGTGCGGCATGAGTGGTCACCCTC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCCTGGAGGTGGAGGATaGCGTGTCAGGAATGGTCCA +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGPGGGG*RVRNGP
Trigger: TGGACCATTCCTGACACGCCATCCTCCACCTCCAGG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGTGTCAACAGGCCTCTaGCCCTTTTCCCCCATCACG +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGVSTGL*PFSPIT
Trigger: CGTGATGGGGGAAAAGGGCCAGAGGCCTGTTGACAC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp AAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCCCCCGCATTaGCCTCTACTGAGGGTGAAGGCAGCAGAGAAGACATCACCAGCA +
Preference number: 2 (lower is better)
Translates to: KPTTQGKLVPSRPPH*PLLRVKAAEKTSPA
Trigger: TGCTGGTGATGTCTTCTCTGCTGCCTTCACCCTCAGTAGAGGCAAATGCGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGACCACACAGGGCAAGTTaGTTCCTTCCCGTCCCCCGC +
Preference number: 2 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGPHRAS*FLPVPR
Trigger: GCGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGG...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCTTACCGGGCCCTCTTaGAGCCAGCTGGAGATGATA +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGLTGPS*SQLEMI
Trigger: TATCATCTCCAGCTGGCTCCAAGAGGGCCCGGTAAG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCGGTCATGATGGCTCTTaGCAGCCTGCTCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: PANTTEGQEGILSLRPSSGHDGS*QPAQHQ
Trigger: CTGGTGCTGAGCAGGCTGCCAAGAGCCATCATGACC...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCATGCCACAACATGGATaGACCTTGAAGACATTGTGC +
Preference number: 2 (lower is better)
Translates to: WRWRMACQEWSTPLARGRMPQHG*TLKTLC
Trigger: GCACAATGTCTTCAAGGTTCATCCATGTTGTGGCAT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCACCTCCTGTGGCCCTaGAGCATTACAATGTCTGTG +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGHLLWP*SITMSV
Trigger: CACAGACATTGTAATGCTGCAGGGCCACAGGAGGTG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCAGACGGCCCTTTCTCTaGCTTACTTTTAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIRRPFL*LTFRAW
Trigger: CCAGGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCATTGGTCTGTTGGGTaGTGCCTGGTCTTGGTAAAG +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGHWSVG*CLVLVK
Trigger: CTTTACCAAGACCAGGCAGCACCCAACAGACCAATG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCTGTGCTCCCGTCTCCTaGAAAGAAGCCACATTTCTT +
Preference number: 2 (lower is better)
Translates to: APRLHKAPSGSRCQNIGICAPVS*KEATFL
Trigger: AAGAAATGTGGCTTCTTTCCAGGAGACGGGAGCACA...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCTTGGGCACCAGGAGTaGGCATTCTGGTTCACTGTT +
Preference number: 2 (lower is better)
Translates to: PANTTEGQEGILSLRPSSLGHQE*AFWFTV
Trigger: AACAGTGAACCAGAATGCCCACTCCTGGTGCCCAAG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp GCATCCGCCTCCAGCTCACATTGGTCTGTTGGGTGCTGCCTGGTCTaGGTAAAGTCAAGAGGCCATTCATCAGTGGAGAGCCACAATGAG +
Preference number: 2 (lower is better)
Translates to: ASASSSHWSVGCCLV*VKSRGHSSVESHNE
Trigger: CTCATTGTGGCTCTCCACTGATGAATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTTCAGTAACGGAACATaGGGGACTCCCTCACATGGA +
Preference number: 2 (lower is better)
Translates to: PANTTEGQEGILSLRPSSFSNGT*GTPSHG
Trigger: TCCATGTGAGGGAGTCCCTCATGTTCCGTTACTGAA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCCAGGCCGCTATCGCCTaGATGTATCTCGTGTCCAAT +
Preference number: 2 (lower is better)
Translates to: GTPSHGHKASRDRPALLFQAAIA*MYLVSN
Trigger: ATTGGACACGAGATACATGCAGGCGATAGCGGCCTG...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCGGAAAATGCATACCGTaGTTCCCCTTCCTCGTTGTC +
Preference number: 2 (lower is better)
Translates to: PANTTEGQEGILSLRPSSGKCIP*FPFLVV
Trigger: GACAACGAGGAAGGGGAAGCACGGTATGCATTTTCC...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTTGATGCAGGGGTGTTaGGGGAAAGCCAGAGTAAAC +
Preference number: 2 (lower is better)
Translates to: PANTTEGQEGILSLRPSSLMQGC*GKARVN
Trigger: GTTTACTCTGGCTTTCCCCCAACACCCCTGCATCAA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGTTGAAAGGCAGCATGTaGGGTGGGAAGAACAATCAG +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGLKGSM*GGKNNQ
Trigger: CTGATTGTTCTTCCCACCCCACATGCTGCCTTTCAA...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCACACATGCCACAACATaGATGAACCTTGAAGACATT +
Preference number: 2 (lower is better)
Translates to: WRWRMACQEWSTPLARGRTHATT*MNLEDI
Trigger: AATGTCTTCAAGGTTCATCCATGTTGTGGCATGTGT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp CAATTCAGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTaGGTTCCTTCCCGTCCCCCGCATTTGCCTCTACTGAGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: QFSEMMFVKPTTQGK*VPSRPPHLPLLRVK
Trigger: CTTCACCCTCAGTAGAGGCAAATGCGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACTGAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGACACTTCTGAGGGGTaGGCTGAGGAAACGGGTGCA +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMDTSEG*AEETGA
Trigger: TGCACCCGTTTCCTCAGCTCACCCCTCAGAAGTGTC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGGCATTGTAAGTTCTTaGCTTGGTCTGGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGGIVSS*LGLGVP
Trigger: AGGGACTCCCAGACCAAGGCAAGAACTTACAATGCC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAAGGGACTCCCTCACATaGACACAAAGCATCAAGGGA +
Preference number: 2 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKRDSLT*TQSIKG
Trigger: TCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCCT...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAAAAGGACACCTCCTGTaGCCCTGCAGCATTACAATG +
Preference number: 2 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGKGHLL*PCSITM
Trigger: CATTGTAATGCTGCAGGGCCACAGGAGGTGTCCTTT...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGAAACCCAGCCAACCTaGAGGTGGAGGATGGCGTGT +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMETQPT*RWRMAC
Trigger: ACACGCCATCCTCCACCTCCAGGTTGGCTGGGTTTC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGAGGAGGCCCTCTGGGTaGGGATGCTCAGTGTCAACA +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMRRPSG*GCSVST
Trigger: TGTTGACACTGAGCATCCCCACCCAGAGGGCCTCCT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp GTCTCCTGGAAAGAAGCCACATTTCTTCAAGTTGATGCAGGGGTGTaGGGGGAAAGCCAGAGTAAACAGGGCTCTCCTGGTACCTCCTTA +
Preference number: 2 (lower is better)
Translates to: VSWKEATFLQVDAGV*GESQSKQGSPGTSL
Trigger: TAAGGAGGTACCAGGAGAGCCCTGTTTACTCTGGCTTTCCCCCAACACCCCTGCATCAACTTGAAGAAATGTGGCTTCTTTCCAGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp GTGGTGTCTTCAGACAATTCCCACCCAGCCATAGGGATAGGCATTTaGGGTTTGAGACGGCCCTTTCTCTGGCTTACTTTTAGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: VVSSDNSHPAIGIGI*GLRRPFLWLTFRAW
Trigger: CCAGGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTATGGCTGGGTGGGAATTGTCTGAAGACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCGACAATTCAGTGAGATaGTGTTTGTCAAGCCCACCA +
Preference number: 2 (lower is better)
Translates to: GTPSHGHKASRDRPALLFDNSVR*CLSSPP
Trigger: TGGTGGGCTTGACAAACATCATCTCACTGAATTGTC...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTTACTATGGATTAAATaGGACGGTGTCTGGGGACAT +
Preference number: 2 (lower is better)
Translates to: PANTTEGQEGILSLRPSSLLWIK*DGVWGH
Trigger: ATGTCCCCAGACACCGTCTCATTTAATCCATAGTAA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCAACCTAAGTGTCCACTaGTGGATGAATGAACAAAAT +
Preference number: 2 (lower is better)
Translates to: APRLHKAPSGSRCQNIGINLSVH*WMNEQN
Trigger: ATTTTGTTCATTCATCCATCAGTGGACACTTAGGTT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATCCCAATGTGGAAAATaGATACCGTGCTTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKSQCGK*IPCFPF
Trigger: GAAGGGGAAGCACGGTATGCATTTTCCACATTGGGA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGCATTACAATGTCTGTaGCATTGTAAGTTCTTGCCT +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGALQCL*HCKFLP
Trigger: AGGCAAGAACTTACAATGCCACAGACATTGTAATGC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGATGTGTTTCCCAATGTaGAAAATGCATACCGTGCTT +
Preference number: 2 (lower is better)
Translates to: CRSAHESSRPQERLLSTGMCFPM*KMHTVL
Trigger: AAGCACGGTATGCATTTTCCACATTGGGAAACACAT...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGATGGCGTGTCAGGAATaGTCCACACCACTTGCCCGT +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMMACQE*STPLAR
Trigger: ACGGGCAAGTGGTGTGGACCATTCCTGACACGCCAT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp TCTTCAGACAATTCCCACCCAGCCATAGGGATAGGCATTTTGGGTTaGAGACGGCCCTTTCTCTGGCTTACTTTTAGAGCCTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: SSDNSHPAIGIGILG*RRPFLWLTFRAWSQ
Trigger: CTGACTCCAGGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTATGGCTGGGTGGGAATTGTCTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCAAGGCAATCCCATGTaGTCCCGTCTCCTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMQGNPM*SRLLER
Trigger: TCTTTCCAGGAGACGGGAGCACATGGGATTGCCTTG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATGTAAGTTCTTGCCTTaGTCTGGGAGTCCCTCCTCT +
Preference number: 2 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPICKFLP*SGSPSS
Trigger: AGAGGAGGGACTCCCAGACCAAGGCAAGAACTTACA...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 90 bp CCAAGGCTCGTTCTGAAGCTGCCGTCCTCTGAGGACAATGGCTTCTaGGAACTTCTTGGAACAAACAAGACAAACCAACACATTAGAGCC +
Preference number: 2 (lower is better)
Translates to: PRLVLKLPSSEDNGF*ELLGTNKTNQHIRA
Trigger: GGCTCTAATGTGTTGGTTTGTCTTGTTTGTTCCAAGAAGTTCCAAGAAGCCATTGTCCTCAGAGGACGGCAGCTTCAGAACGAGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCATCCCCACCTTCCTTaGAAGGCAGCATGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTHPHLP*KAACGV
Trigger: CACCCCACATGCTGCCTTTCAAGGAAGGTGGGGATG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGTGTCCACTGATGGATaGATGAACAAAATGAGGACT +
Preference number: 2 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGVSTDG*MNKMRT
Trigger: AGTCCTCATTTTGTTCATTCATCCATCAGTGGACAC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATCAGATAGCTTCACATaGCATTTCCACCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKSDSFT*HFHLRN
Trigger: GTTTCTCAGGTGGAAATGGCATGTGAAGCTATCTGA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCCCAGACCAAGAGCTTaGGCACCAGGAGTGGGCATT +
Preference number: 2 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTPRPRA*APGVGI
Trigger: AATGCCCACTCCTGGTGCCCAAGCTCTTGGTCTGGG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGCAGACTGTGGTTTGTaGGGTGCAGGCCCGGCATCC +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFADCGL*GAGPAS
Trigger: GGATGCCGGGCCTGCACCCCACAAACCACAGTCTGC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCCTGAGAAACTTGGGTaGGTCACATCTCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTPEKLG*VTSLQA
Trigger: GGCCTGGAGAGATGTGACTCACCCAAGTTTCTCAGG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATACTTCCTCGTTGTCTATaGGTACGTAAAAGGACACCT +
Preference number: 2 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPILPRCL*VRKRTP
Trigger: AGGTGTCCTTTTACGTACTCATAGACAACGAGGAAG...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGACATCACCAGCAGCTaGCCACCACTGCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFDITSS*PPLPGS
Trigger: AGAGCCAGGCAGTGGTGGGCAGCTGCTGGTGATGTC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGATTGAGTGCCTCCTATaGACCAGGCAATATCCTACC +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMIECLL*TRQYPT
Trigger: GGTAGGATATTGCCTGGTGCATAGGAGGCACTCAAT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAAGGACAATGGCTTCTTaGAACTTCTTGGAACAAACA +
Preference number: 2 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKRTMAS*NFLEQT
Trigger: TGTTTGTTCCAAGAAGTTCCAAGAAGCCATTGTCCT...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTACTCCTGACCTCAGGTaGTCTACGCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFTPDLR*STHLSL
Trigger: GAGGCTGAGGTGCGTAGATCACCTGAGGTCAGGAGT...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCCAGGCCTCAGTTTTTaGATCTGTAGAAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMPGLSF*ICRRKR
Trigger: TCTCTTCCTTCTACAGATGCAAAAACTGAGGCCTGG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCCCTGGTTCCCAACCTaGGGTCTCTGTCCTCAGGAT +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFPWFPT*GLCPQD
Trigger: ATCCTGAGGACAGAGACCCCAGGTTGGGAACCAGGG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGTTGTGACAATTCAGTaGGATGATGTTTGTCAAGCC +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMVVTIQ*DDVCQA
Trigger: GGCTTGACAAACATCATCTCACTGAATTGTCACAAC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCATGCCATTTCCACCTaGGAAACTTGGGTGAGTCAC +
Preference number: 2 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTHAIST*ETWVSH
Trigger: GTGACTCACCCAAGTTTCTCAGGTGGAAATGGCATG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGAAGCTGCCGTCCTCTaGGGACAATGGCTTCTTGGA +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFEAAVL*GQWLLG
Trigger: TCCAAGAAGCCATTGTCCTCAGAGGACGGCAGCTTC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGGAATGGCAAAAACCTaGACTTTGTGGTCAGATAGA +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMGMAKT*TLWSDR
Trigger: TCTATCTGACCACAAAGTCCAGGTTTTTGCCATTCC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGAGGTGCCTGCCATCATaGTTGGCTAATTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMRCLPS*LANFCI
Trigger: AATACAAAAATTAGCCAAGCATGATGGCAGGCACCT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCTTCTTGGAACTTCTTaGAACAAACAAGACAAACCA +
Preference number: 2 (lower is better)
Translates to: SLEVASEDHETALWTNKMLLGTS*NKQDKP
Trigger: TGGTTTGTCTTGTTTGTTCCAAGAAGTTCCAAGAAG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGTCTGGGGACATGCTTaGAGAATGTATTGTACAACT +
Preference number: 2 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTVWGHA*RMYCTT
Trigger: AGTTGTACAATACATTCTCCAAGCATGTCCCCAGAC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTAAAGGTTGGCTTGAGTaGGTACTTTGGTATCCCTAC +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFKGWLE*VLWYPY
Trigger: GTAGGGATACCAAAGTACTCACTCAAGCCAACCTTT...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCAGGAGTGGGCATTCTaGTTCACTGTTAGGCAAAAA +
Preference number: 2 (lower is better)
Translates to: WLVLFLGLWETSIKALSFQEWAF*FTVRQK
Trigger: TTTTTGCCTAACAGTGAACCAGAATGCCCACTCCTG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTaGGCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: DGVSGMVHTTCP*APRLHKAPSGS
Trigger: GGACCCTGACGGGGCCTTGTGCAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp GTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTaGCCGTGGGCGCCTAGGCTGCACAAGGCCCCGTCA +
Preference number: 3 (lower is better)
Translates to: VEDGVSGMVHTT*PWAPRLHKAPS
Trigger: TGACGGGGCCTTGTGCAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp CTCAGCACAGGGCTGGGCAGACTGTGGTTTGTGGGGTaGAGGCCCGGCATCCGCCTCCAGCTCACATTGGTC +
Preference number: 3 (lower is better)
Translates to: LSTGLGRLWFVG*RPGIRLQLTLV
Trigger: GACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp CAGCCAACCTGGAGGTGGAGGATGGCGTGTCAGGAATaGTCCACACCACTTGCCCGTGGGCGCCTAGGCTGC +
Preference number: 3 (lower is better)
Translates to: QPTWRWRMACQE*STPLARGRLGC
Trigger: GCAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCAGGTTGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GACTCCTCAGCACAGGGCTGGGCAGACTGTGGTTTGTaGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACAT +
Preference number: 3 (lower is better)
Translates to: DSSAQGWADCGL*GAGPASASSSH
Trigger: ATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp CAAGAGAGACTCCTCAGCACAGGGCTGGGCAGACTGTaGTTTGTGGGGTGCAGGCCCGGCATCCGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: QERLLSTGLGRL*FVGCRPGIRLQ
Trigger: CTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCTCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp GAATGGTCCACACCACTTGCCCGTGGGCGCCTAGGCTaGACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACA +
Preference number: 3 (lower is better)
Translates to: EWSTPLARGRLG*TRPRQGPGVRT
Trigger: TGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GAGAGCCACAATGAGGGTGACCACTCATGCCGCACATaGCAGGACAGGACACAGAGTCCCTCCAGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: ESHNEGDHSCRT*QDRTQSPSRRP
Trigger: GGGCCTCCTGGAGGGACTCTGTGTCCTGTCCTGCCATGTGCGGCATGAGTGGTCACCCTCATTGTGGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp TGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATTaGTCTGTTGGGTGCTGCCTGGTCTTGGTAAAGTCA +
Preference number: 3 (lower is better)
Translates to: WGAGPASASSSH*SVGCCLVLVKS
Trigger: TGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTGGCATTGTAAGTTCTaGCCTTGGTCTGGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: WRWRMACQEWSTPLARGRWHCKF*PWSGSP
Trigger: GGGACTCCCAGACCAAGGCAAGAACTTACAATGCCA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCCGGCTGCAGCTTCAGTaGACCAACTTCTCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIRLQLQ*TNFSLP
Trigger: TGGGAGGGAGAAGTTGGTCAACTGAAGCTGCAGCCG...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp CACCTTAGGAAACCCAGCCAACCTGGAGGTGGAGGATaGCGTGTCAGGAATGGTCCACACCACTTGCCCGTG +
Preference number: 3 (lower is better)
Translates to: HLRKPSQPGGGG*RVRNGPHHLPV
Trigger: CACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCAGGTTGGCTGGGTTTCCTAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp AGGCCCGGCATCCGCCTCCAGCTCACATTGGTCTGTTaGGTGCTGCCTGGTCTTGGTAAAGTCAAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: RPGIRLQLTLVC*VLPGLGKVKRP
Trigger: TGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCCCTCAAATGCTGATCTaGTACTTGGGGAGGCTATGC +
Preference number: 3 (lower is better)
Translates to: WRWRMACQEWSTPLARGRPQMLI*YLGRLC
Trigger: GCATAGCCTCCCCAAGTACAAGATCAGCATTTGAGG...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp TTCTCTAAGCTCAGACCCAGAGGGCAAGACCTAGAGTaGCCTGCAACTGAGGCAGCCTCCCCAAGGCTCGTT +
Preference number: 3 (lower is better)
Translates to: FSKLRPRGQDLE*PATEAASPRLV
Trigger: AACGAGCCTTGGGGAGGCTGCCTCAGTTGCAGGGCACTCTAGGTCTTGCCCTCTGGGTCTGAGCTTAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp TCATCAGTGGAGAGCCACAATGAGGGTGACCACTCATaGCGCACATGGCAGGACAGGACACAGAGTCCCTCC +
Preference number: 3 (lower is better)
Translates to: SSVESHNEGDHS*RTWQDRTQSPS
Trigger: GGAGGGACTCTGTGTCCTGTCCTGCCATGTGCGGCATGAGTGGTCACCCTCATTGTGGCTCTCCACTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp CCAACTTCGCCCTCCATTCCAATGCAGATCAGCTCATaGGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: PTSPSIPMQISS*VLQAPRETPQH
Trigger: GTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCATTGGAATGGAGGGCGAAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp GTCAACAGGCCTCTGGCCCTTTTCCCCCATCACGCATaGCGTTCATCTCCGAACTTGCCGCTTATGAAAGGG +
Preference number: 3 (lower is better)
Translates to: VNRPLALFPHHA*RSSPNLPLMKG
Trigger: CCCTTTCATAAGCGGCAAGTTCGGAGATGAACGGCATGCGTGATGGGGGAAAAGGGCCAGAGGCCTGTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp TCACCCCCAGAACCAGGACAAGGTCATGATGGCTCTTaGCAGCCTGCTCAGCACCAGGGCAAGAACAACTCA +
Preference number: 3 (lower is better)
Translates to: SPPEPGQGHDGS*QPAQHQGKNNS
Trigger: TGAGTTGTTCTTGCCCTGGTGCTGAGCAGGCTGCCAAGAGCCATCATGACCTTGTCCTGGTTCTGGGGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGGAAACTTGGCCCCTTaGAGCTTCAGTCACTTTGTG +
Preference number: 3 (lower is better)
Translates to: CRSAHESSRPQERLLSTGGNLAP*SFSHFV
Trigger: CACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCATAGGGATAGGCATTTaGGGTTTGAGACGGCCCTTT +
Preference number: 3 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIIGIGI*GLRRPF
Trigger: AAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTAT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp GGGGCCTGTGAAAGGACCCTCCAAGGCAATCCCATGTaGTCCCGTCTCCTGGAAAGAAGCCACATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: GACERTLQGNPM*SRLLERSHISS
Trigger: TGAAGAAATGTGGCTTCTTTCCAGGAGACGGGAGCACATGGGATTGCCTTGGAGGGTCCTTTCACAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATCCCAGACCAAGAGCTaGGGCACCAGGAGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPISQTKS*GTRSGH
Trigger: ATGCCCACTCCTGGTGCCCAAGCTCTTGGTCTGGGA...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GACACCTCCTGTGGCCCTGCAGCATTACAATGTCTGTaGCATTGTAAGTTCTTGCCTTGGTCTGGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: DTSCGPAALQCL*HCKFLPWSGSP
Trigger: GGGACTCCCAGACCAAGGCAAGAACTTACAATGCCACAGACATTGTAATGCTGCAGGGCCACAGGAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GGACCCTCCAAGGCAATCCCATGTGCTCCCGTCTCCTaGAAAGAAGCCACATTTCTTCAAGTTGATGCAGGG +
Preference number: 3 (lower is better)
Translates to: GPSKAIPCAPVS*KEATFLQVDAG
Trigger: CCCTGCATCAACTTGAAGAAATGTGGCTTCTTTCCAGGAGACGGGAGCACATGGGATTGCCTTGGAGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCCTTACCGGGCCCTCTaGGAGCCAGCTGGAGATGAT +
Preference number: 3 (lower is better)
Translates to: SLEVASEDHETALWTNKMPYRAL*EPAGDD
Trigger: ATCATCTCCAGCTGGCTCCAAGAGGGCCCGGTAAGG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGTTGATGCAGGGGTGTaGGGGGAAAGCCAGAGTAAA +
Preference number: 3 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKVDAGV*GESQSK
Trigger: TTTACTCTGGCTTTCCCCCAACACCCCTGCATCAAC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTACCACACAGGGCAAGTaGGTTCCTTCCCGTCCCCCG +
Preference number: 3 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTTTQGK*VPSRPP
Trigger: CGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGGT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp ACTTTGGTATCCCTACCCGCCCCCAGCCTCAAATGCTaGTCTTGTACTTGGGGAGGCTATGCTAAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: TLVSLPAPSLKC*SCTWGGYAKGE
Trigger: TTCTCCTTTAGCATAGCCTCCCCAAGTACAAGATCAGCATTTGAGGCTGGGGGCGGGTAGGGATACCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGTACAGTGGCGCTATCTaGGCTTACTGCAAACTCCGC +
Preference number: 3 (lower is better)
Translates to: SLEVASEDHETALWTNKMYSGAI*AYCKLR
Trigger: GCGGAGTTTGCAGTAAGCCAAGATAGCGCCACTGTA...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp TCAGTGACCACAGTGCAGGGGAGCCCGTGGCTGCTTTaGGGGCTTGATGTGGTATTGAGTCAAACTAAATTT +
Preference number: 3 (lower is better)
Translates to: SVTTVQGSPWLL*GLDVVLSQTKF
Trigger: AAATTTAGTTTGACTCAATACCACATCAAGCCCTCAAAGCAGCCACGGGCTCCCCTGCACTGTGGTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp CACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTaGTTTTCGCTTCTTCCTAGCTGCCTAATTAGGACT +
Preference number: 3 (lower is better)
Translates to: HMDTKHQGTGRL*FSLLPSCLIRT
Trigger: AGTCCTAATTAGGCAGCTAGGAAGAAGCGAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp ATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATaGCACATGACACTGATACAGTACCAGAAATGCATG +
Preference number: 3 (lower is better)
Translates to: IAQNQLGTLWPI*HMTLIQYQKCM
Trigger: CATGCATTTCTGGTACTGTATCAGTGTCATGTGTCATATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp GGGACAGGCCGGCTTTGCTTTTCGCTTCTTCCTAGCTaGCTAATTAGGACTTACTCAGTTCACAGTGTTCTA +
Preference number: 3 (lower is better)
Translates to: GTGRLCFSLLPS*LIRTYSVHSVL
Trigger: TAGAACACTGTGAACTGAGTAAGTCCTAATTAGGCAGCTAGGAAGAAGCGAAAAGCAAAGCCGGCCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GGGATAGGCATTTTGGGTTTGAGACGGCCCTTTCTCTaGCTTACTTTTAGAGCCTGGAGTCAGACTTCTTCA +
Preference number: 3 (lower is better)
Translates to: GIGILGLRRPFL*LTFRAWSQTSS
Trigger: TGAAGAAGTCTGACTCCAGGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp TTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATaGACAAACAAAATGCACTACACAACATACTCCTCC +
Preference number: 3 (lower is better)
Translates to: LEVASEDHETAL*TNKMHYTTYSS
Trigger: GGAGGAGTATGTTGTGTAGTGCATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCGCCTCCAGCTCACATaGGTCTGTTGGGTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: WLVLFLGLWETSIKALSFRLQLT*VCWVLP
Trigger: AGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGAGGACAATGGCTTCTaGGAACTTCTTGGAACAAAC +
Preference number: 3 (lower is better)
Translates to: SLEVASEDHETALWTNKMEDNGF*ELLGTN
Trigger: GTTTGTTCCAAGAAGTTCCAAGAAGCCATTGTCCTC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp AACCTATCTCCAAAGCGTTGTGACAATTCAGTGAGATaGTGTTTGTCAAGCCCACCACACAGGGCAAGTTGG +
Preference number: 3 (lower is better)
Translates to: NLSPKRCDNSVR*CLSSPPHRASW
Trigger: CCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACTGAATTGTCACAACGCTTTGGAGATAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp ACTTGGGTGAGTCACATCTCTCCAGGCCTCAGTTTTTaGATCTGTAGAAGGAAGAGAAGACAACCTATCTCC +
Preference number: 3 (lower is better)
Translates to: TWVSHISPGLSF*ICRRKRRQPIS
Trigger: GGAGATAGGTTGTCTTCTCTTCCTTCTACAGATGCAAAAACTGAGGCCTGGAGAGATGTGACTCACCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp CTCTGTCTGGGTTTGTTTCTTCCCCAGCTAGTCACATaGCTCCCTCTCTCACTTCATATCTGTACTCAAACA +
Preference number: 3 (lower is better)
Translates to: LCLGLFLPQLVT*LPLSLHICTQT
Trigger: TGTTTGAGTACAGATATGAAGTGAGAGAGGGAGCCATGTGACTAGCTGGGGAAGAAACAAACCCAGACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGCCATAAAGGGTAAGTaGGGAGAGACCCTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: WLVLFLGLWETSIKALSFAIKGK*GETLVP
Trigger: GGGAACCAGGGTCTCTCCCAACTTACCCTTTATGGC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCATCCAGCTCTGGGCTaGGCTCTCGCCTTGCTTTTT +
Preference number: 3 (lower is better)
Translates to: WLVLFLGLWETSIKALSFHPALG*ALALLF
Trigger: AAAAAGCAAGGCGAGAGCCAAGCCCAGAGCTGGATG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp AAGACAACCTATCTCCAAAGCGTTGTGACAATTCAGTaGGATGATGTTTGTCAAGCCCACCACACAGGGCAA +
Preference number: 3 (lower is better)
Translates to: KTTYLQSVVTIQ*DDVCQAHHTGQ
Trigger: TTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACTGAATTGTCACAACGCTTTGGAGATAGGTTGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp TGGTTGCTTGCACATGACAACAGCATCATTTATTGGTaGCAGGATTCAAAGACCTGGGCATTGCAGCTAGCA +
Preference number: 3 (lower is better)
Translates to: WLLAHDNSIIYW*QDSKTWALQLA
Trigger: TGCTAGCTGCAATGCCCAGGTCTTTGAATCCTGTCACCAATAAATGATGCTGTTGTCATGTGCAAGCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp CACAGAAATGTAGATCGCTCAGTCACTGAAACGGATTaGCTTGGCTGTTCTAACTTCCACACCGAAAGGAAG +
Preference number: 3 (lower is better)
Translates to: HRNVDRSVTETD*LGCSNFHTERK
Trigger: CTTCCTTTCGGTGTGGAAGTTAGAACAGCCAAGTCAATCCGTTTCAGTGACTGAGCGATCTACATTTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp AAAACCACACAGGTATTGGAGTCAGATAGCTTCACATaGCATTTCCACCTGAGAAACTTGGGTGAGTCACAT +
Preference number: 3 (lower is better)
Translates to: KTTQVLESDSFT*HFHLRNLGESH
Trigger: ATGTGACTCACCCAAGTTTCTCAGGTGGAAATGGCATGTGAAGCTATCTGACTCCAATACCTGTGTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR GCA 72 bp AGCAGATGTGTTTCCCAATGTGGAAAATGCATACCGTaGTTCCCCTTCCTCGTTGTCTATGAGTACGTAAAA +
Preference number: 3 (lower is better)
Translates to: SRCVSQCGKCIP*FPFLVVYEYVK
Trigger: TTTTACGTACTCATAGACAACGAGGAAGGGGAAGCACGGTATGCATTTTCCACATTGGGAAACACATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp CCAGACTCGGCTGCAAACTGTCTGATTCCATCTACATaGCATTCTGAAATCAGATCATCGTTTTCTGGAATC +
Preference number: 3 (lower is better)
Translates to: PDSAANCLIPST*HSEIRSSFSGI
Trigger: GATTCCAGAAAACGATGATCTGATTTCAGAATGTCATGTAGATGGAATCAGACAGTTTGCAGCCGAGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR-3UTR CAA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTTGCTTGGAGAATGTATaGTACAACTGCTTAGGAATT +
Preference number: 3 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTCLENV*YNCLGI
Trigger: AATTCCTAAGCAGTTGTACAATACATTCTCCAAGCA...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp ATTCAATCTCCTTCAACCTCATTACTATGGATTAAATaGGACGGTGTCTGGGGACATGCTTGGAGAATGTAT +
Preference number: 3 (lower is better)
Translates to: IQSPSTSLLWIK*DGVWGHAWRMY
Trigger: ATACATTCTCCAAGCATGTCCCCAGACACCGTCTCATTTAATCCATAGTAATGAGGTTGAAGGAGATTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp CCTGGAAATTTTCAAAAGGCTAATACTGCTAAGTGTTaGCCAGGATGTAGAACAACTGGAACATTCATACAC +
Preference number: 3 (lower is better)
Translates to: PGNFQKANTAKC*PGCRTTGTFIH
Trigger: GTGTATGAATGTTCCAGTTGTTCTACATCCTGGCCAACACTTAGCAGTATTAGCCTTTTGAAAATTTCCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp GGTTTTTCCACCCACATTAATTTGGTTGCTTGCACATaGCAACAGCATCATTTATTGGTGACAGGATTCAAA +
Preference number: 3 (lower is better)
Translates to: GFSTHINLVACT*QQHHLLVTGFK
Trigger: TTTGAATCCTGTCACCAATAAATGATGCTGTTGTCATGTGCAAGCAACCAAATTAATGTGGGTGGAAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR TCA 72 bp TACAGCATGAATGAATCTTGCAAACATCATTTTAAGTaGAAGAAACCAGACTCGGCTGCAAACTGTCTGATT +
Preference number: 3 (lower is better)
Translates to: YSMNESCKHHFK*KKPDSAANCLI
Trigger: AATCAGACAGTTTGCAGCCGAGTCTGGTTTCTTTCACTTAAAATGATGTTTGCAAGATTCATTCATGCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp GAGTACAAAATGGTAGAGCGACTTTGGAAAGCACTTTaGCAGTTTCTTATACAGTTAAATTTTACACAGACC +
Preference number: 3 (lower is better)
Translates to: EYKMVERLWKAL*QFLIQLNFTQT
Trigger: GGTCTGTGTAAAATTTAACTGTATAAGAAACTGCCAAAGTGCTTTCCAAAGTCGCTCTACCATTTTGTACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CCA 72 bp TTTAAAATGAAAGAAATTCTGACACATGCCACAACATaGATGAACCTTGAAGACATTGTGCTAAGTGAAAGA +
Preference number: 3 (lower is better)
Translates to: FKMKEILTHATT*MNLEDIVLSER
Trigger: TCTTTCACTTAGCACAATGTCTTCAAGGTTCATCCATGTTGTGGCATGTGTCAGAATTTCTTTCATTTTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCGTCCAATCGGGGCCCTaGGGCAGCGTCCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRVQSGP*GSVPPS
Trigger: GGAGGGCGGGACGCTGCCTCAGGGCCCCGATTGGAC...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCGCTCTGCGCCGCGATaGTCGCGGGTCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGRSAPR*SRVRSL
Trigger: GAGGCTGCGGACCCGCGAGCATCGCGGCGCAGAGCG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp AGAGACTCCTCAGCACAGGGCTGGGCAGACTGTGGTTaGTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RDSSAQGWADCG*WGAGPASASSS
Trigger: TGAGCTGGAGGCGGATGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCCTGTGCTGAGGAGTCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCATGGTCCACACCACTTaGCCGTGGGCGCCTAGGCTG +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRMVHTT*PWAPRL
Trigger: CAGCCTAGGCGCCCACGGGCAAGTGGTGTGGACCAT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGTCCCCTCGGGCTGACTaGCTCCCGCGCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGSPRAD*LPRSAA
Trigger: AGCAGCGCTGCGCGGGAGCCAGTCAGCCCGAGGGGA...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGCGGTCTCCGGGCACTTaGTTGCGGGCTGCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGRSPGT*LRAAPL
Trigger: CAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCG...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCGGGGCCAACTGCTGTTaGGAGGCTGGGAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIGANCC*EAGRAP
Trigger: GGGAGCCCTCCCAGCCTCCCAACAGCAGTTGGCCCC...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATCCCTCCCCTCGGGCTaGCTGGCTCCCGCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKSLPSG*LAPAQR
Trigger: GCGCTGCGCGGGAGCCAGTCAGCCCGAGGGGAGGGA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCAGGCATGAGCCCCCATaGCTGGCCTATGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRRHEPP*LAYAWL
Trigger: AAGCCAGGCATAGGCCAGGCATGGGGGCTCATGCCT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCAGGGGAGCCCGTGGCTaGTTTGAGGGCTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRRGARG*FEGLMW
Trigger: CCACATCAAGCCCTCAAAGCAGCCACGGGCTCCCCT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCCAAGGGTGGTGGGCATaGAGAAGATGCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRQGWWA*RRCPPA
Trigger: TGCTGGTGGGCATCTTCTGCATGCCCACCACCCTTG...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGCACCACGCGCGCTCTaGGCCGCGATGCTCGCGGGT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKAPRAL*AAMLAG
Trigger: ACCCGCGAGCATCGCGGCGCAGAGCGCGCGTGGTGC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCGCAGCCCGGAGTCGCTaGGCCGCACCACCACGAAGA +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSAARSR*AAPPRR
Trigger: TCTTCGTGGTGGTGCGGCCCAGCGACTCCGGGCTGC...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp GTGGGGTGCAGGCCCGGCATCCGCCTCCAGCTCACATaGGTCTGTTGGGTGCTGCCTGGTCTTGGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: VGCRPGIRLQLT*VCWVLPGLGKV
Trigger: GACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCGGATGCCGGGCCTGCACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCAGAACAGCGCCACCATaGCCAGCATGTGCACCACGC +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIRTAPP*PACAPR
Trigger: GCGTGGTGCACATGCTGGTCATGGTGGCGCTGTTCT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACACTTGGTTGCGGGCTaGGCCCCTGCCTCCGCGCTC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKHLVAG*APASAL
Trigger: GAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGACTCCGGGCACTTGGTTaGGGGCTGCGCCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGLRALG*GLRPCL
Trigger: GAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAG...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGTGACCAGGTGCAGCTaGGGCGCGCTGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKVTRCS*GALSCP
Trigger: CGGGCAGCTCAGCGCGCCGCAGCTGCACCTGGTCAC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAACGAAGACCCGCCTGTaGAGAAGCCCGCCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKTKTRL*RSPPGR
Trigger: GCGGCCCGGCGGGCTTCTGCACAGGCGGGTCTTCGT...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCGGTTGTCCACAAGGGTaGTGGGCATGCAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRGCPQG*WACRRC
Trigger: GCATCTTCTGCATGCCCACCACCCTTGTGGACAACC...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCGCCCCTCTGTGGCCCTaGAAACTTGGCCCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIAPLWP*KLGPFE
Trigger: CTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGGC...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCAGTGGTGTAGACCCTaGGCATGCCCTTCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSQWCRP*ACPSRA
Trigger: GGCCCGAGAAGGGCATGCGCAGGGTCTACACCACTG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCAGCTGGGATTACAGGTaGCTGCCATCATGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRSWDYR*LPSCLA
Trigger: AGCCAAGCATGATGGCAGGCACCTGTAATCCCAGCT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCAGCCAGGCCCTTCCCTaGGCAAGCCGTGGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFSQALP*ASRGEP
Trigger: TGGCTCACCACGGCTTGCCCAGGGAAGGGCCTGGCT...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCCACACAGGGCAAGTTaGTTCCTTCCCGTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSPHRAS*FLPVPR
Trigger: GCGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCCAGCCAACCTGGAGGTaGAGGATGGCGTGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIQPTWR*RMACQE
Trigger: TTCCTGACACGCCATCCTCCACCTCCAGGTTGGCTG...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATGCGGGCGTCCACCATaGAGTGGTGCTCCTCACGGG +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKCGRPP*SGAPHG
Trigger: CCCGTGAGGAGCACCACTTCATGGTGGACGCCCGCA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATACTGGGCAAGCCGTGGTaGGCCACCCGCCCATTCCGC +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPILGKPW*ATRPFR
Trigger: GCGGAATGGGCGGGTGGCTCACCACGGCTTGCCCAG...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCATGATGCCCCCAGTTaGGGGCTCCGGCGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRHDAPS*GLRRSP
Trigger: CGGAGACCGCCGGAGCCCGCAACTGGGGGCATCATG...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGTCCACCATGAAGTGGTaGTCCTCACGGGTGACGGTC +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGSTMKW*SSRVTV
Trigger: GACCGTCACCCGTGAGGAGCACCACTTCATGGTGGA...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCCCTCTGGGTGGGGATaGTCAGTGTCAACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSPSGWG*SVSTGL
Trigger: GAGGCCTGTTGACACTGAGCATCCCCACCCAGAGGG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCCCAAAATCACGTCATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRPKSRH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGACGTGATTTTGG...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCAATCCTGCCCCTCTGTaGCCCTGGAAACTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSNPAPL*PWKLGP
Trigger: GGGGCCAAGTTTCCAGGGCCACAGAGGGGCAGGATT...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGGAAACCCAGCCAACCTaGAGGTGGAGGATGGCGTGT +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGETQPT*RWRMAC
Trigger: ACACGCCATCCTCCACCTCCAGGTTGGCTGGGTTTC...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGGGCTGGGCAGACTGTaGTTTGTGGGGTGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKGLGRL*FVGCRP
Trigger: GGGCCTGCACCCCACAAACCACAGTCTGCCCAGCCC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGCAGTGGCGCCATCTTaGCTCACTGAAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGAVAPS*LTETSA
Trigger: GGCAGAGGTTTCAGTGAGCCAAGATGGCGCCACTGC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGATGCAGATCAGCTCATaGGTCCTCCAGGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGMQISS*VLQAPR
Trigger: TCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCAT...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGTTCTCGCGGAAAGGGTaGACGATGCAGCGGAACCTT +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGFSRKG*TMQRNL
Trigger: AAGGTTCCGCTGCATCGTGCACCCTTTCCGCGAGAA...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGCAGCTGCCCACCACTaGCTGGCTCTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRAAAHH*LALERE
Trigger: CTCCCTCTCCAGAGCCAGGCAGTGGTGGGCAGCTGC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATACGTGGGCGCCTAGGCTaGACAAGGCCCCGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIRGRLG*TRPRQG
Trigger: ACCCTGACGGGGCCTTGTGCAGCCTAGGCGCCCACG...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCTGCTGTTGGGAGGCTaGGAGGGCTCCCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRLLLGG*EGSPSM
Trigger: CATGGAGGGGGAGCCCTCCCAGCCTCCCAACAGCAG...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGCGCGGAAGGCGGCCTaGAAGCCGCGGCGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMARKAA*KPRRKF
Trigger: GAACTTCCGCCGCGGCTTCCAGGCCGCCTTCCGCGC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGATGGCGTGTCAGGAATaGTCCACACCACTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGMACQE*STPLAR
Trigger: ACGGGCAAGTGGTGTGGACCATTCCTGACACGCCAT...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGCAGACTGTGGTTTGTaGGGTGCAGGCCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGADCGL*GAGPAS
Trigger: GGATGCCGGGCCTGCACCCCACAAACCACAGTCTGC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCGCCAAAACAGCAGCCTaGAGCCTGTGGCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFAKTAA*SLWLAG
Trigger: ACCAGCCAGCCACAGGCTCCAGGCTGCTGTTTTGGC...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp AGGAGTCTCCAAATGGCACTCCGGCTGCAGCTTCAGTaGACCAACTTCTCCCTCCCAGGAAGCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSLQMALRLQLQ*TNFSLPGSREE
Trigger: CTCCTCCCTGCTTCCTGGGAGGGAGAAGTTGGTCAACTGAAGCTGCAGCCGGAGTGCCATTTGGAGACTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAGAAGGAGGGGGCTCGTaGGGCGCAGTCGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIEGGGS*GAVVMA
Trigger: TGCCATGACGACTGCGCCTCACGAGCCCCCTCCTTC...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCAATGGCCACCAGTGTaGAAACGGAAGCCGACACAG +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSQWPPV*KRKPTQ
Trigger: CTGTGTCGGCTTCCGTTTTCACACTGGTGGCCATTG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGGTTGGCGCTGCTGTTaGAGAAGGCCAGCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRGWRCC*RRPASA
Trigger: CGCACTGGCTGGCCTTCTTCAACAGCAGCGCCAACC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCGAACTTGCCGCTTATaGAAGGGCAGTCACCTTAGG +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGRTCRL*KGSHLR
Trigger: CCTAAGGTGACTGCCCTTTCATAAGCGGCAAGTTCG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTTGTAGACCCTGCGCATaGCCTTCTCGGGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRCRPCA*PSRARP
Trigger: AGGCCTGGCCCGAGAAGGGCATGCGCAGGGTCTACA...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGACATCACCAGCAGCTaGCCACCACTGCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKDITSS*PPLPGS
Trigger: AGAGCCAGGCAGTGGTGGGCAGCTGCTGGTGATGTC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCGGAAAATGCATACCGTaGTTCCCCTTCCTCGTTGTC +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIGKCIP*FPFLVV
Trigger: GACAACGAGGAAGGGGAAGCACGGTATGCATTTTCC...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATACTGTGGTTTGTGGGGTaGAGGCCCGGCATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPILWFVG*RPGIRL
Trigger: GAGGCGGATGCCGGGCCTGCACCCCACAAACCACAG...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCAGTACCAGAAATGCATaGCACCAGCTAATACCACTG +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRSTRNA*HQLIPL
Trigger: CAGTGGTATTAGCTGGTGCCATGCATTTCTGGTACT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCAGTTGGGAGAGACCCTaGTTCCCAACCTGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFSWERP*FPTWGL
Trigger: GAGACCCCAGGTTGGGAACCAGGGTCTCTCCCAACT...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCTTGTCCATCCAGCTCTaGGCTTGGCTCTCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFLSIQL*AWLSPC
Trigger: GCAAGGCGAGAGCCAAGCCCAGAGCTGGATGGACAA...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGATCATTGGTGGAGCATaGTGGCTCGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGIIGGA*WLAPVI
Trigger: GATTACAGGCGCGAGCCACCATGCTCCACCAATGAT...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTGCCTGGCCTATGCCTaGCTTTTAATAGACACTGAA +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRCLAYA*LLIDTE
Trigger: TTCAGTGTCTATTAAAAGCCAGGCATAGGCCAGGCA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGTTCAGTAACGGAACATaGGGGACTCCCTCACATGGA +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGFSNGT*GTPSHG
Trigger: TCCATGTGAGGGAGTCCCTCATGTTCCGTTACTGAA...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGGCTGCAGCTTCAGTTaGCCAACTTCTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGGCSFS*PTSPSQ
Trigger: CTGGGAGGGAGAAGTTGGTCAACTGAAGCTGCAGCC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGAGGGTGACCACTCATaGCGCACATGGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSREGDHS*RTWQDR
Trigger: CCTGTCCTGCCATGTGCGGCATGAGTGGTCACCCTC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGTGGTCTGTTGGGTGCTaGCTGGTCTTGGTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGWSVGC*LVLVKS
Trigger: TGACTTTACCAAGACCAGGCAGCACCCAACAGACCA...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGCGTCCCGCCCTCCCTaGACCCCCTCAGATATCCCA +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMASRPP*TPSDIP
Trigger: TGGGATATCTGAGGGGGTCCAGGGAGGGCGGGACGC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCGTCTGGGGACATGCTTaGAGAATGTATTGTACAACT +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRVWGHA*RMYCTT
Trigger: AGTTGTACAATACATTCTCCAAGCATGTCCCCAGAC...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACCCAGACCAAGAGCTTaGGCACCAGGAGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKPRPRA*APGVGI
Trigger: AATGCCCACTCCTGGTGCCCAAGCTCTTGGTCTGGG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACCCTGGTTCCCAACCTaGGGTCTCTGTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKPWFPT*GLCPQD
Trigger: ATCCTGAGGACAGAGACCCCAGGTTGGGAACCAGGG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACCTGGAGGTGGAGGATaGCGTGTCAGGAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKPGGGG*RVRNGP
Trigger: TGGACCATTCCTGACACGCCATCCTCCACCTCCAGG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCTCACATTGGTCTGTTaGGTGCTGCCTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSLTLVC*VLPGLG
Trigger: ACCAAGACCAGGCAGCACCCAACAGACCAATGTGAG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCATCCAGCTCTGGGCTTaGCTCTCGCCTTGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSIQLWA*LSPCFL
Trigger: CAAAAAGCAAGGCGAGAGCCAAGCCCAGAGCTGGAT...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCCCACCCACATTAATTTaGTTGCTTGCACATGACAAC +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRPPTLI*LLAHDN
Trigger: GTTGTCATGTGCAAGCAACCAAATTAATGTGGGTGG...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp GAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTaGGTTCCTTCCCGTCCCCCGCATTTGCCTCTACTG +
Preference number: 4 (lower is better)
Translates to: EMMFVKPTTQGK*VPSRPPHLPLL
Trigger: CAGTAGAGGCAAATGCGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTACCAGGACAAGGTCATaGTGGCTCTTGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRTRTRS*WLLAAC
Trigger: GCAGGCTGCCAAGAGCCATCATGACCTTGTCCTGGT...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTACTCCTGACCTCAGGTaGTCTACGCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRTPDLR*STHLSL
Trigger: GAGGCTGAGGTGCGTAGATCACCTGAGGTCAGGAGT...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGGCTGCTTTGAGGGCTTaGTGTGGTATTGAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGAALRA*CGIESN
Trigger: GTTTGACTCAATACCACATCAAGCCCTCAAAGCAGC...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCGTGACAGTATGCATGTaGCGGTTCTTGAGCACGATG +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSVTVCM*RFLSTM
Trigger: CATCGTGCTCAAGAACCGGCACATGCATACTGTCAC...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGCAAGGCTTTGTACCTaGAGCCCCAGTGAGCAGATG +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGARLCT*SPSEQM
Trigger: CATCTGCTCACTGGGGCTGCAGGTACAAAGCCTTGC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCAGAAATTCTGACACATaGCACAACATGGATGAACCT +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRRNSDT*HNMDEP
Trigger: AGGTTCATCCATGTTGTGGCATGTGTCAGAATTTCT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCACCTTTTACCTAAACTaGTGGTATTCCTTCTATCCC +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRTFYLN*WYSFYP
Trigger: GGGATAGAAGGAATACCAGCAGTTTAGGTAAAAGGT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATCAGGAGTCTCCAAATaGCACTCCGGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKSGVSK*HSGCSF
Trigger: GAAGCTGCAGCCGGAGTGCCATTTGGAGACTCCTGA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCACACCACTTGCCCGTaGGCGCCTAGGCTGCACAAG +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMHTTCP*APRLHK
Trigger: CTTGTGCAGCCTAGGCGCCCACGGGCAAGTGGTGTG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACACTCATGCCGCACATaGCAGGACAGGACACAGAGT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKHSCRT*QDRTQS
Trigger: ACTCTGTGTCCTGTCCTGCCATGTGCGGCATGAGTG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGCCTCCAGCTCACATTaGTCTGTTGGGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRASSSH*SVGCCL
Trigger: CAGGCAGCACCCAACAGACCAATGTGAGCTGGAGGC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTAGGGCTCCCCCTCCATaGTGCCCCCAGTTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTRAPPP*CPQLRA
Trigger: AGCCCGCAACTGGGGGCATCATGGAGGGGGAGCCCT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGAAAGGTTGGCTTGAGTaGGTACTTTGGTATCCCTAC +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGKGWLE*VLWYPY
Trigger: GTAGGGATACCAAAGTACTCACTCAAGCCAACCTTT...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCATGTTGGTGACAGTATaGATGTGCCGGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSMLVTV*MCRFLS
Trigger: GCTCAAGAACCGGCACATGCATACTGTCACCAACAT...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACCAAGCCGCTCATCTTaGATGTGGCATTGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKPSRSS*MWHCRR
Trigger: CCTTCGACAATGCCACATGCAAGATGAGCGGCTTGG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAAAGCCGACACAGACATaGCCTGCACCAAGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIKPTQT*PAPSRS
Trigger: TGAGCGGCTTGGTGCAGGGCATGTCTGTGTCGGCTT...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGGAAAGGGTGCACGATaGAGCGGAACCTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRGKGAR*SGTFPQ
Trigger: CTGTGGAAAGGTTCCGCTGCATCGTGCACCCTTTCC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGGGCCTGGCAGAGCTTaGGCGCGATGCGGGCGTACA +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTGPGRA*ARCGRT
Trigger: TGTACGCCCGCATCGCGCGCAAGCTCTGCCAGGCCC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACAGGCCGCTATCGCCTaGATGTATCTCGTGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKQAAIA*MYLVSN
Trigger: ATTGGACACGAGATACATGCAGGCGATAGCGGCCTG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCTCGCTTCTTCCTAGCTaGCTAATTAGGACTTACTCA +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGISLLPS*LIRTYS
Trigger: TGAGTAAGTCCTAATTAGGCAGCTAGGAAGAAGCGA...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCGGCATTGTAAGTTCTTaGCTTGGTCTGGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFGIVSS*LGLGVP
Trigger: AGGGACTCCCAGACCAAGGCAAGAACTTACAATGCC...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTCCCAATGTGGAAAATaGATACCGTGCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSSQCGK*IPCFPF
Trigger: GAAGGGGAAGCACGGTATGCATTTTCCACATTGGGA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACAAGGCAATCCCATGTaGTCCCGTCTCCTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKQGNPM*SRLLER
Trigger: TCTTTCCAGGAGACGGGAGCACATGGGATTGCCTTG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCCATTGGTCTGTTGGGTaGTGCCTGGTCTTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFHWSVG*CLVLVK
Trigger: CTTTACCAAGACCAGGCAGCACCCAACAGACCAATG...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGACGCCCTCCATTCCAATaGAGATCAGCTCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGRPPFQ*RSAHES
Trigger: GGACTCATGAGCTGATCTGCATTGGAATGGAGGGCG...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGCGTCCACCATGAAGTaGTGCTCCTCACGGGTGACG +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMASTMK*CSSRVT
Trigger: CGTCACCCGTGAGGAGCACCACTTCATGGTGGACGC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCAGGGACTCCCTCACATaGACACAAAGCATCAAGGGA +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFRDSLT*TQSIKG
Trigger: TCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCCT...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGTTCTTGCCTTGGTCTaGGAGTCCCTCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGVLALV*ESLLCS
Trigger: AGAACAGAGGAGGGACTCCCAGACCAAGGCAAGAAC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTTGAAAGGCAGCATGTaGGGTGGGAAGAACAATCAG +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSLKGSM*GGKNNQ
Trigger: CTGATTGTTCTTCCCACCCCACATGCTGCCTTTCAA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCCACGAGACAGCACTATaGACAAACAAAATGCACTAC +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIHETAL*TNKMHY
Trigger: GTAGTGCATTTTGTTTGTCCATAGTGCTGTCTCGTG...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp TCCAGCTCACATTGGTCTGTTGGGTGCTGCCTGGTCTaGGTAAAGTCAAGAGGCCATTCATCAGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSSHWSVGCCLV*VKSRGHSSVES
Trigger: GCTCTCCACTGATGAATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCCAACAGACCAATGTGAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGCTGCCCGTAGTCGATaGGCAGCAGCAGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTAARSR*AAAAPR
Trigger: TCTGGGCGCTGCTGCTGCTCATCGACTACGGGCAGC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCGTTATCACTCAGATCTaGATGGGCAGGTATAGCCTC +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFVITQI*MGRYSL
Trigger: GAGGCTATACCTGCCCATTCAGATCTGAGTGATAAC...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCTCCTCAAACAGAGAGTaGTTTAACACCACCACTGGC +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFSSNRE*FNTTTG
Trigger: GCCAGTGGTGGTGTTAAATCACTCTCTGTTTGAGGA...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCGTCACTGAAACGGATTaGCTTGGCTGTTCTAACTTC +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSVTETD*LGCSNF
Trigger: GAAGTTAGAACAGCCAAGTCAATCCGTTTCAGTGAC...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGTGGCTCTTGGCAGCCTaGTCAGCACCAGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMWLLAA*SAPGQE
Trigger: TTCTTGCCCTGGTGCTGAGCAGGCTGCCAAGAGCCA...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGCTCTCATCTTCCTTTaGCAACTTCGCCCTCCATTC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGALIFL*QLRPPF
Trigger: GAATGGAGGGCGAAGTTGGCAAAGGAAGATGAGAGC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCGGGATTACAGGTGCCTaGCATCATGCTTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: GTPSHGHKASRDRPALLFGITGA*HHAWLI
Trigger: AATTAGCCAAGCATGATGGCAGGCACCTGTAATCCC...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGCTATCTTGGCTTACTaGAAACTCCGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRAILAY*KLRLPG
Trigger: ACCTGGGAGGCGGAGTTTGCAGTAAGCCAAGATAGC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGCGAGAAGAGCACAGTaGTGTAGACCCTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMARRAQ*CRPCAC
Trigger: GCATGCGCAGGGTCTACACCACTGTGCTCTTCTCGC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGATGTAAGTTCTTGCCTTaGTCTGGGAGTCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGCKFLP*SGSPSS
Trigger: AGAGGAGGGACTCCCAGACCAAGGCAAGAACTTACA...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGGAATGGCAAAAACCTaGACTTTGTGGTCAGATAGA +
Preference number: 4 (lower is better)
Translates to: CRSAHESSRPQERLLSTGGMAKT*TLWSDR
Trigger: TCTATCTGACCACAAAGTCCAGGTTTTTGCCATTCC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTTTTACCTAAACTGCTaGTATTCCTTCTATCCCAAA +
Preference number: 4 (lower is better)
Translates to: WRWRMACQEWSTPLARGRFYLNC*YSFYPK
Trigger: TTTGGGATAGAAGGAATACCAGCAGTTTAGGTAAAA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACAGGATTCAAAGACCTaGGCATTGCAGCTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKQDSKT*ALQLAG
Trigger: TCCTGCTAGCTGCAATGCCCAGGTCTTTGAATCCTG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCCTGAGAAACTTGGGTaGGTCACATCTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMPEKLG*VTSLQA
Trigger: GGCCTGGAGAGATGTGACTCACCCAAGTTTCTCAGG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCATGCCATTTCCACCTaGGAAACTTGGGTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRHAIST*ETWVSH
Trigger: GTGACTCACCCAAGTTTCTCAGGTGGAAATGGCATG...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCCCAGCCTCAAATGCTaGTCTTGTACTTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMPSLKC*SCTWGG
Trigger: GCCTCCCCAAGTACAAGATCAGCATTTGAGGCTGGG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGGGACAGGCCGGCTTTaGTTTTCGCTTCTTCCTAGC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMGTGRL*FSLLPS
Trigger: GCTAGGAAGAAGCGAAAAGCAAAGCCGGCCTGTCCC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCAAATGTCCATTTAAGTaGAAGATGAAGGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PANTTEGQEGILSLRPSSKCPFK*KMKGPV
Trigger: CACAGGCCCCTTCATCTTGCACTTAAATGGACATTT...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAATTGAGTGCCTCCTATaGACCAGGCAATATCCTACC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKIECLL*TRQYPT
Trigger: GGTAGGATATTGCCTGGTGCATAGGAGGCACTCAAT...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGCAGTGGCGCAATTTTaGCTCACTGCATCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMAVAQF*LTASSA
Trigger: GGCAGAGGATGCAGTGAGCCAAAATTGCGCCACTGC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCTCTATCCCAAATCTTTaGAAGCCATTGAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: APRLHKAPSGSRCQNIGISIPNL*KPLKVM
Trigger: CATCACTTTCAATGGCTTCCAAAGATTTGGGATAGA...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp GTGAGACACATCACAGCTGTCCTGGAAGCCTCTGTTTaGTCAGCCATAAAGGGTAAGTTGGGAGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: VRHITAVLEASV*SAIKGKLGETL
Trigger: CAGGGTCTCTCCCAACTTACCCTTTATGGCTGACAAAACAGAGGCTTCCAGGACAGCTGTGATGTGTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTACTCTCTGGCCCATATaGCACATGACACTGATACAG +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRTLWPI*HMTLIQ
Trigger: CTGTATCAGTGTCATGTGTCATATGGGCCAGAGAGT...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAATGGAAAGGTTGGCTTaGGTGAGTACTTTGGTATCC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGMERLA*VSTLVS
Trigger: GGATACCAAAGTACTCACTCAAGCCAACCTTTCCAT...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAATGCCACAACATGGATaGACCTTGAAGACATTGTGC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKMPQHG*TLKTLC
Trigger: GCACAATGTCTTCAAGGTTCATCCATGTTGTGGCAT...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGATCCACAAAGGTAAGTaGAATAGACATAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGIHKGK*NRHSSC
Trigger: ACAGGAACTATGTCTATTTCACTTACCTTTGTGGAT...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATCAACAGACATTTATTaGGTGCCTCCTATGCACCAG +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKSTDIY*VPPMHQ
Trigger: CTGGTGCATAGGAGGCACTCAATAAATGTCTGTTGA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGTTCCCCCATCACGCATaGCGTTCATCTCCGAACTTG +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMFPHHA*RSSPNL
Trigger: CAAGTTCGGAGATGAACGGCATGCGTGATGGGGGAA...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATACCCATGCCTGGCCTATaGCTGGCTTTTAATAGACAC +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIPMPGL*LAFNRH
Trigger: GTGTCTATTAAAAGCCAGGCATAGGCCAGGCATGGG...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGGATTTAAAAATCATTaGTGGAGCATGGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGGFKNH*WSMVAR
Trigger: GCGAGCCACCATGCTCCACCAATGATTTTTAAATCC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAGATGCTCTCTCTGTCTaGGTTTGTTTCTTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIDALSV*VCFFPS
Trigger: GCTGGGGAAGAAACAAACCCAGACAGAGAGAGCATC...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp AATTCCCACCCAGCCATAGGGATAGGCATTTTGGGTTaGAGACGGCCCTTTCTCTGGCTTACTTTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: NSHPAIGIGILG*RRPFLWLTFRA
Trigger: GGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTATGGCTGGGTGGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGACAATTCAGTGAGATaGTGTTTGTCAAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRDNSVR*CLSSPP
Trigger: TGGTGGGCTTGACAAACATCATCTCACTGAATTGTC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAGTTGTGACAATTCAGTaGGATGATGTTTGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGVVTIQ*DDVCQA
Trigger: GGCTTGACAAACATCATCTCACTGAATTGTCACAAC...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGATTACTATGGATTAAATaGGACGGTGTCTGGGGACAT +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGLLWIK*DGVWGH
Trigger: ATGTCCCCAGACACCGTCTCATTTAATCCATAGTAA...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTGCTTGGCTCTCGCCTTaGTTTTTGGATGAATACACA +
Preference number: 4 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRAWLSP*FLDEYT
Trigger: TGTGTATTCATCCAAAAAGCAAGGCGAGAGCCAAGC...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGAAAGGACACCTCCTGTaGCCCTGCAGCATTACAATG +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMKGHLL*PCSITM
Trigger: CATTGTAATGCTGCAGGGCCACAGGAGGTGTCCTTT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGTTGATGCAGGGGTGTTaGGGGAAAGCCAGAGTAAAC +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMLMQGC*GKARVN
Trigger: GTTTACTCTGGCTTTCCCCCAACACCCCTGCATCAA...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGAGACGGCCCTTTCTCTaGCTTACTTTTAGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMRRPFL*LTFRAW
Trigger: CCAGGCTCTAAAAGTAAGCCAGAGAAAGGGCCGTCT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATGCAAATGTGTCTCATaGCCAAAACAGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPICKCVS*PKQQPG
Trigger: TCCAGGCTGCTGTTTTGGCCATGAGACACATTTGCA...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGACAACATACTCCTCCTaGGGGGCAGTCAAAACACAG +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMTTYSS*GAVKTQ
Trigger: CTGTGTTTTGACTGCCCCCCAGGAGGAGTATGTTGT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp TCAGACAATTCCCACCCAGCCATAGGGATAGGCATTTaGGGTTTGAGACGGCCCTTTCTCTGGCTTACTTTT +
Preference number: 4 (lower is better)
Translates to: SDNSHPAIGIGI*GLRRPFLWLTF
Trigger: AAAAGTAAGCCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTATGGCTGGGTGGGAATTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGAAGCTGCCGTCCTCTaGGGACAATGGCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTEAAVL*GQWLLG
Trigger: TCCAAGAAGCCATTGTCCTCAGAGGACGGCAGCTTC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGCTTATGGTCCACTGTaGGAAATAAATAACAGACAC +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKAYGPL*EINNRH
Trigger: GTGTCTGTTATTTATTTCTCACAGTGGACCATAAGC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTAGCCCGTGGCTGCTTTaGGGGCTTGATGTGGTATTG +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTSPWLL*GLDVVL
Trigger: CAATACCACATCAAGCCCTCAAAGCAGCCACGGGCT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTAACAGACCAGGGTGTTaGCCACCATGCAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTNRPGC*PPCRAG
Trigger: TCCTGCTCTGCATGGTGGGCAACACCCTGGTCTGTT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGACACAGACATGCCCTaGACCAAGCCGCTCATCTTG +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTDTDMP*TKPLIL
Trigger: CAAGATGAGCGGCTTGGTGCAGGGCATGTCTGTGTC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATACCAGGCCTCAGTTTTTaGATCTGTAGAAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIPGLSF*ICRRKR
Trigger: TCTCTTCCTTCTACAGATGCAAAAACTGAGGCCTGG...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGGGCAAGACCTAGAGTaGCCTGCAACTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFGQDLE*PATEAA
Trigger: GGCTGCCTCAGTTGCAGGGCACTCTAGGTCTTGCCC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAAGGTGCCTGCCATCATaGTTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGRCLPS*LANFCI
Trigger: AATACAAAAATTAGCCAAGCATGATGGCAGGCACCT...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCGCTCATCTTGCATGTaGCATTGTCGAAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTRSSCM*HCRRAT
Trigger: GGTGGCCCTTCGACAATGCCACATGCAAGATGAGCG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCTTACCGGGCCCTCTTaGAGCCAGCTGGAGATGATA +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTLTGPS*SQLEMI
Trigger: TATCATCTCCAGCTGGCTCCAAGAGGGCCCGGTAAG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGAATGTGTTTCCCAATGTaGAAAATGCATACCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGMCFPM*KMHTVL
Trigger: AAGCACGGTATGCATTTTCCACATTGGGAAACACAT...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATCACTCAGATCTGAATaGGCAGGTATAGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPISLRSE*AGIASD
Trigger: ATCAGAGGCTATACCTGCCCATTCAGATCTGAGTGA...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCTTCCTCGTTGTCTATaGGTACGTAAAAGGACACCT +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMLPRCL*VRKRTP
Trigger: AGGTGTCCTTTTACGTACTCATAGACAACGAGGAAG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCATCCCCACCTTCCTTaGAAGGCAGCATGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFHPHLP*KAACGV
Trigger: CACCCCACATGCTGCCTTTCAAGGAAGGTGGGGATG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGTGGGCACAGGGAAGTaGGACACATCACAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFVGTGK*DTSQLS
Trigger: GGACAGCTGTGATGTGTCTCACTTCCCTGTGCCCAC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGACACTTCTGAGGGGTaGGCTGAGGAAACGGGTGCA +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFDTSEG*AEETGA
Trigger: TGCACCCGTTTCCTCAGCTCACCCCTCAGAAGTGTC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGGCGGGCAGATCATCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFGGQII*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGATGATCTGCCCGCC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATCAGATAGCTTCACATaGCATTTCCACCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPISDSFT*HFHLRN
Trigger: GTTTCTCAGGTGGAAATGGCATGTGAAGCTATCTGA...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGTGTCAACAGGCCTCTaGCCCTTTTCCCCCATCACG +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFVSTGL*PFSPIT
Trigger: CGTGATGGGGGAAAAGGGCCAGAGGCCTGTTGACAC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTACAGTGGCGCTATCTTaGCTTACTGCAAACTCCGCC +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTTVALS*LTANSA
Trigger: GGCGGAGTTTGCAGTAAGCCAAGATAGCGCCACTGT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp TCAGATAGCTTCACATGCCATTTCCACCTGAGAAACTaGGGTGAGTCACATCTCTCCAGGCCTCAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SDSFTCHFHLRN*GESHLSRPQFL
Trigger: CAAAAACTGAGGCCTGGAGAGATGTGACTCACCCAAGTTTCTCAGGTGGAAATGGCATGTGAAGCTATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp GTTCTGAAGCTGCCGTCCTCTGAGGACAATGGCTTCTaGGAACTTCTTGGAACAAACAAGACAAACCAACAC +
Preference number: 4 (lower is better)
Translates to: VLKLPSSEDNGF*ELLGTNKTNQH
Trigger: GTGTTGGTTTGTCTTGTTTGTTCCAAGAAGTTCCAAGAAGCCATTGTCCTCAGAGGACGGCAGCTTCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp ACCACAGCAGCTTGGGGAATGGCAAAAACCTGGACTTaGTGGTCAGATAGACTAAGGTTTGAGTCTCACCTT +
Preference number: 4 (lower is better)
Translates to: TTAAWGMAKTWT*WSDRLRFESHL
Trigger: AAGGTGAGACTCAAACCTTAGTCTATCTGACCACAAAGTCCAGGTTTTTGCCATTCCCCAAGCTGCTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGGTGTCCACTGATGGATaGATGAACAAAATGAGGACT +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMVSTDG*MNKMRT
Trigger: AGTCCTCATTTTGTTCATTCATCCATCAGTGGACAC...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTAGATCGCTCAGTCACTaGAACGGATTGACTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTRSLSH*NGLTWL
Trigger: CAGCCAAGTCAATCCGTTTCAGTGACTGAGCGATCT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAATACTTCTCTGAGCCTTaGTTTTCCAATCTATTGTAT +
Preference number: 4 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKYFSEP*FSNLLY
Trigger: ATACAATAGATTGGAAAAGCAAGGCTCAGAGAAGTA...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAGCATTACAATGTCTGTaGCATTGTAAGTTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIALQCL*HCKFLP
Trigger: AGGCAAGAACTTACAATGCCACAGACATTGTAATGC...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp AGTAAACACAATAGATTTCTTTCCCAGACCAAGAGCTaGGGCACCAGGAGTGGGCATTCTGGTTCACTGTTA +
Preference number: 4 (lower is better)
Translates to: SKHNRFLSQTKS*GTRSGHSGSLL
Trigger: TAACAGTGAACCAGAATGCCCACTCCTGGTGCCCAAGCTCTTGGTCTGGGAAAGAAATCTATTGTGTTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGTGTTAGTCCCATTCTaGCTTAGGGGCCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFVLVPF*LRGQLL
Trigger: CAGCAGTTGGCCCCTAAGTCAGAATGGGACTAACAC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAAACCTAAGTGTCCACTaGTGGATGAATGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPINLSVH*WMNEQN
Trigger: ATTTTGTTCATTCATCCATCAGTGGACACTTAGGTT...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCACCTCCTGTGGCCCTaGAGCATTACAATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFHLLWP*SITMSV
Trigger: CACAGACATTGTAATGCTGCAGGGCCACAGGAGGTG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTCAGTTCAGCAGCTTTTaGTCCTTCAGTGACCACAGT +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTQFSSF*SFSDHS
Trigger: ACTGTGGTCACTGAAGGAGCAAAAGCTGCTGAACTG...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTTTTAAAAATCATTGGTaGAGCATGGTGGCTCGCGCC +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTFKNHW*SMVARA
Trigger: GGCGCGAGCCACCATGCTCCACCAATGATTTTTAAA...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGAAAACCTGGACTTTGTaGTCAGATAGACTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SLEVASEDHETALWTNKMKTWTL*SDRLRF
Trigger: AAACCTTAGTCTATCTGACCACAAAGTCCAGGTTTT...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTTGTGCTCCCGTCTCCTaGAAAGAAGCCACATTTCTT +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFCAPVS*KEATFL
Trigger: AAGAAATGTGGCTTCTTTCCAGGAGACGGGAGCACA...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTAGGACAATGGCTTCTTaGAACTTCTTGGAACAAACA +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTRTMAS*NFLEQT
Trigger: TGTTTGTTCCAAGAAGTTCCAAGAAGCCATTGTCCT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTAAACATCATTTTAAGTaGAAGAAACCAGACTCGGCT +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTKHHFK*KKPDSA
Trigger: AGCCGAGTCTGGTTTCTTTCACTTAAAATGATGTTT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTTTATTTTTAGGATTATaGGAGACCTCCATCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTLFLGL*ETSIKA
Trigger: AGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAA...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp ACACTGCTGATGGGAGTACAAAATGGTAGAGCGACTTaGGAAAGCACTTTGGCAGTTTCTTATACAGTTAAA +
Preference number: 4 (lower is better)
Translates to: TLLMGVQNGRAT*ESTLAVSYTVK
Trigger: TTTAACTGTATAAGAAACTGCCAAAGTGCTTTCCAAAGTCGCTCTACCATTTTGTACTCCCATCAGCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGCCTTGCTTTTTGGATaGATACACAGTAGACTAATG +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFALLFG*IHSRLM
Trigger: CATTAGTCTACTGTGTATTCATCCAAAAAGCAAGGC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGTTACTTTACTTCTCTaGGCCTTGCTTTTCCAATCT +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFVTLLL*ALLFQS
Trigger: AGATTGGAAAAGCAAGGCTCAGAGAAGTAAAGTAAC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR TCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTTTGGTTGCTTGCACATaGCAACAGCATCATTTATTG +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFLVACT*QQHHLL
Trigger: CAATAAATGATGCTGTTGTCATGTGCAAGCAACCAA...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR GCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCCCACAATGTCTCACTaGTTCATTAAAGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFPTMSH*FIKALS
Trigger: TGACAATGCTTTAATGAAGCAGTGAGACATTGTGGG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCTTCTTGGAACTTCTTaGAACAAACAAGACAAACCA +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFLLGTS*NKQDKP
Trigger: TGGTTTGTCTTGTTTGTTCCAAGAAGTTCCAAGAAG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
3UTR CAA 72 bp GGAGTACAAAATGGTAGAGCGACTTTGGAAAGCACTTaGGCAGTTTCTTATACAGTTAAATTTTACACAGAC +
Preference number: 4 (lower is better)
Translates to: GVQNGRATLEST*AVSYTVKFYTD
Trigger: GTCTGTGTAAAATTTAACTGTATAAGAAACTGCCAAAGTGCTTTCCAAAGTCGCTCTACCATTTTGTACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CCA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTCTTTGGAAAGCACTTTaGCAGTTTCTTATACAGTTA +
Preference number: 4 (lower is better)
Translates to: WLVLFLGLWETSIKALSFLWKAL*QFLIQL
Trigger: TAACTGTATAAGAAACTGCCAAAGTGCTTTCCAAAG...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 90 bp GCGCTCCCAGGCCCCGGGCCCTGGCCGGTTTCCCTCCCCTCGGGCTaGCTGGCTCCCGCGCAGCGCTGCTGCCCGCAGGGCTCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: ALPGPGPWPVSLPSG*LAPAQRCCPQGSAA
Trigger: GGCGGCTGAGCCCTGCGGGCAGCAGCGCTGCGCGGGAGCCAGTCAGCCCGAGGGGAGGGAAACCGGCCAGGGCCCGGGGCCTGGGAGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CCA 90 bp TCCCAGGCCCCGGGCCCTGGCCGGTTTCCCTCCCCTCGGGCTGACTaGCTCCCGCGCAGCGCTGCTGCCCGCAGGGCTCAGCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SQAPGPGRFPSPRAD*LPRSAAARRAQPPA
Trigger: GGCGGGCGGCTGAGCCCTGCGGGCAGCAGCGCTGCGCGGGAGCCAGTCAGCCCGAGGGGAGGGAAACCGGCCAGGGCCCGGGGCCTGGGA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 90 bp CGCCACCATGACCAGCATGTGCACCACGCGCGCTCTGCGCCGCGATaGTCGCGGGTCCGCAGCCTCCTCGCCCCCGGGGGCCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RHHDQHVHHARSAPR*SRVRSLLAPGGRAR
Trigger: CCGGGCCCGGCCCCCGGGGGCGAGGAGGCTGCGGACCCGCGAGCATCGCGGCGCAGAGCGCGCGTGGTGCACATGCTGGTCATGGTGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 90 bp GGGCCAGCGGGCAGAGGGACGGTCTCCGGGCACTTGGTTGCGGGCTaGGCCCCTGCCTCCGCGCTCCGCAGGTCCGGTCGGTCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: GPAGRGTVSGHLVAG*APASALRRSGRSGQ
Trigger: CTGCCCGGACCGACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CCA 90 bp CGGGCCCCTTCGGGCCAGCGGGCAGAGGGACGGTCTCCGGGCACTTaGTTGCGGGCTGCGCCCCTGCCTCCGCGCTCCGCAGGTCCGGTC +
Preference number: 5 (lower is better)
Translates to: RAPSGQRAEGRSPGT*LRAAPLPPRSAGPV
Trigger: GACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGCCCGAAGGGGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 90 bp AGGGGCAGGTGGGAGCAGCCAGGCCCTTCCCTGGGCAAGCCGTGGTaGGCCACCCGCCCATTCCGCAGCGGGAGGCGGCCGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RGRWEQPGPSLGKPW*ATRPFRSGRRPGLG
Trigger: CCCCAGGCCCGGCCGCCTCCCGCTGCGGAATGGGCGGGTGGCTCACCACGGCTTGCCCAGGGAAGGGCCTGGCTGCTCCCACCTGCCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 90 bp GGGCAGAGGGACGGTCTCCGGGCACTTGGTTGCGGGCTGCGCCCCTaGCTCCGCGCTCCGCAGGTCCGGTCGGTCCGGGCAGAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GQRDGLRALGCGLRP*LRAPQVRSVRAEVS
Trigger: GCTCACCTCTGCCCGGACCGACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 90 bp GGCAGCCAGGACAGCGTGAAGAACAGCGCCACCATGACCAGCATGTaGACCACGCGCGCTCTGCGCCGCGATGCTCGCGGGTCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: GSQDSVKNSATMTSM*TTRALRRDARGSAA
Trigger: GGCTGCGGACCCGCGAGCATCGCGGCGCAGAGCGCGCGTGGTGCACATGCTGGTCATGGTGGCGCTGTTCTTCACGCTGTCCTGGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 90 bp CCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGCCCTaGGGCAGCGTCCCGCCCTCCCTGGACCCCCTCAGATATCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGRYRLHVSRVQSGP*GSVPPSLDPLRYPR
Trigger: CCTGGGATATCTGAGGGGGTCCAGGGAGGGCGGGACGCTGCCTCAGGGCCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTCCCGTCCCCCGCATTaGCCTCTACTGAGGGTGAAG +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRSRPPH*PLLRVK
Trigger: CTTCACCCTCAGTAGAGGCAAATGCGGGGGACGGGA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 90 bp AAGGTGAGGTTTGTAGCCGGGGTGGCCTCAGTGTTAGTCCCATTCTaGCTTAGGGGCCAACTGCTGTTGGGAGGCTGGGAGGGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: KVRFVAGVASVLVPF*LRGQLLLGGWEGSP
Trigger: GGGGGAGCCCTCCCAGCCTCCCAACAGCAGTTGGCCCCTAAGTCAGAATGGGACTAACACTGAGGCCACCCCGGCTACAAACCTCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCATCTTGCATGTGGCATaGTCGAAGGGCCACCCAGTG +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRILHVA*SKGHPV
Trigger: CACTGGGTGGCCCTTCGACAATGCCACATGCAAGAT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTCATCCCCACCTTCCTaGAAAGGCAGCATGTGGGGT +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRSSPPS*KGSMWG
Trigger: ACCCCACATGCTGCCTTTCAAGGAAGGTGGGGATGA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCTCCCAGACCAAGAGCTaGGGCACCAGGAGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: APRLHKAPSGSRCQNIGISQTKS*GTRSGH
Trigger: ATGCCCACTCCTGGTGCCCAAGCTCTTGGTCTGGGA...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTGGGCAGACTGTGGTTaGTGGGGTGCAGGCCCGGCA +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSWADCG*WGAGPA
Trigger: TGCCGGGCCTGCACCCCACAAACCACAGTCTGCCCA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCAAACAGACCAGGGTGTaGCCCACCATGCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: APRLHKAPSGSRCQNIGIKQTRV*PTMQSR
Trigger: CCTGCTCTGCATGGTGGGCAACACCCTGGTCTGTTT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 90 bp GGTGCACGATGCAGCGGAACCTTTCCACAGCAATGGCCACCAGTGTaGAAACGGAAGCCGACACAGACATGCCCTGCACCAAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GARCSGTFPQQWPPV*KRKPTQTCPAPSRS
Trigger: TGAGCGGCTTGGTGCAGGGCATGTCTGTGTCGGCTTCCGTTTTCACACTGGTGGCCATTGCTGTGGAAAGGTTCCGCTGCATCGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAACGGTCTCCGGGCACTaGGTTGCGGGCTGCGCCCCT +
Preference number: 5 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPITVSGH*VAGCAP
Trigger: AGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGT...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCACCACACAGGGCAAGTaGGTTCCTTCCCGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: GTPSHGHKASRDRPALLFTTQGK*VPSRPP
Trigger: CGGGGGACGGGAAGGAACCAACTTGCCCTGTGTGGT...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTTCCACCTGAGAAACTaGGGTGAGTCACATCTCTCC +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRFHLRN*GESHLS
Trigger: GGAGAGATGTGACTCACCCAAGTTTCTCAGGTGGAA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 90 bp GCAATGGCCACCAGTGTGAAAACGGAAGCCGACACAGACATGCCCTaGACCAAGCCGCTCATCTTGCATGTGGCATTGTCGAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: AMATSVKTEADTDMP*TKPLILHVALSKGH
Trigger: GTGGCCCTTCGACAATGCCACATGCAAGATGAGCGGCTTGGTGCAGGGCATGTCTGTGTCGGCTTCCGTTTTCACACTGGTGGCCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCCACCCAGTGATGAGGTaGTCCACAAGGGTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: GTPSHGHKASRDRPALLFHPVMR*STRVVG
Trigger: GCCCACCACCCTTGTGGACAACCTCATCACTGGGTG...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GCGCCTAGGCTGCACAAGGCCCCGTCAGGGTCCAGGTGTCAGAACATAGGAATCACCAAGCCGCTCATCTaGCATGTGGCATTGTCGAAG +
Preference number: 5 (lower is better)
Translates to: APRLHKAPSGSRCQNIGITKPLI*HVALSK
Trigger: CTTCGACAATGCCACATGCAAGATGAGCGGCTTGGT...GATTCCTATGTTCTGACACCTGGACCCTGACGGGGCCTTGTGCAGCCTAGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGTGCATGTGCCGGTTCTaGAGCACGATGAAACAGACC +
Preference number: 5 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGCMCRF*STMKQT
Trigger: GGTCTGTTTCATCGTGCTCAAGAACCGGCACATGCA...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCCACATTTCTTCAAGTaGATGCAGGGGTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: CRSAHESSRPQERLLSTGPHFFK*MQGCWG
Trigger: CCCCCAACACCCCTGCATCAACTTGAAGAAATGTGG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCGATGGAAAGGTTGGCTaGAGTGAGTACTTTGGTATC +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRDGKVG*SEYFGI
Trigger: GATACCAAAGTACTCACTCAAGCCAACCTTTCCATC...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAACGCCTCCAGCTCACATaGGTCTGTTGGGTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKRLQLT*VCWVLP
Trigger: AGGCAGCACCCAACAGACCAATGTGAGCTGGAGGCG...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCCTTACCGGGCCCTCTaGGAGCCAGCTGGAGATGAT +
Preference number: 5 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRPYRAL*EPAGDD
Trigger: ATCATCTCCAGCTGGCTCCAAGAGGGCCCGGTAAGG...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCGTTGATGCAGGGGTGTaGGGGGAAAGCCAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSVDAGV*GESQSK
Trigger: TTTACTCTGGCTTTCCCCCAACACCCCTGCATCAAC...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCTGGCATTGTAAGTTCTaGCCTTGGTCTGGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: GTPSHGHKASRDRPALLFWHCKF*PWSGSP
Trigger: GGGACTCCCAGACCAAGGCAAGAACTTACAATGCCA...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCATAGGCATTTTGGGTTaGAGACGGCCCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSIGILG*RRPFLW
Trigger: CCAGAGAAAGGGCCGTCTCAAACCCAAAATGCCTAT...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGCCATAAAGGGTAAGTaGGGAGAGACCCTGGTTCCC +
Preference number: 5 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKAIKGK*GETLVP
Trigger: GGGAACCAGGGTCTCTCCCAACTTACCCTTTATGGC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTCTCTCTGTCTGGGTTaGTTTCTTCCCCAGCTAGTC +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSSLCLG*FLPQLV
Trigger: GACTAGCTGGGGAAGAAACAAACCCAGACAGAGAGA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCTCAAAGACCTGGGCATaGCAGCTAGCAGGAGAACAC +
Preference number: 5 (lower is better)
Translates to: GTPSHGHKASRDRPALLFSKTWA*QLAGEH
Trigger: GTGTTCTCCTGCTAGCTGCAATGCCCAGGTCTTTGA...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGGGGCCTGGCAGAGCTaGCGCGCGATGCGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: WLVLFLGLWETSIKALSFGAWQS*RAMRAY
Trigger: GTACGCCCGCATCGCGCGCAAGCTCTGCCAGGCCCC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGGAGGACAATGGCTTCTaGGAACTTCTTGGAACAAAC +
Preference number: 5 (lower is better)
Translates to: CRSAHESSRPQERLLSTGEDNGF*ELLGTN
Trigger: GTTTGTTCCAAGAAGTTCCAAGAAGCCATTGTCCTC...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCTGCTTGGAGAATGTATaGTACAACTGCTTAGGAATT +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRCLENV*YNCLGI
Trigger: AATTCCTAAGCAGTTGTACAATACATTCTCCAAGCA...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAGCTCACATTGGTCTGTaGGGTGCTGCCTGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIAHIGL*GAAWSW
Trigger: CCAAGACCAGGCAGCACCCAACAGACCAATGTGAGC...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGCTCTCGCCTTGCTTTTaGGATGAATACACAGTAGAC +
Preference number: 5 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGLSPCF*DEYTVD
Trigger: GTCTACTGTGTATTCATCCAAAAAGCAAGGCGAGAG...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCATCCAGCTCTGGGCTaGGCTCTCGCCTTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRHPALG*ALALLF
Trigger: AAAAAGCAAGGCGAGAGCCAAGCCCAGAGCTGGATG...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGAGGTGGAGGATGGCGTGTCAGGAATGGTCCACACCACTTGCCCGTGGGCGCAATCTTTGGAAGCCATaGAAAGTGATGCAAATGTGT +
Preference number: 5 (lower is better)
Translates to: WRWRMACQEWSTPLARGRNLWKP*KVMQMC
Trigger: ACACATTTGCATCACTTTCAATGGCTTCCAAAGATT...GCGCCCACGGGCAAGTGGTGTGGACCATTCCTGACACGCCATCCTCCACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGCAGATCAGCTCATGAGTCCTCCAGGCCCCAAGAGAGACTCCTCAGCACAGGGCCCAAATCACTAAGCTaGGGTTTTTCCACCCACATT +
Preference number: 5 (lower is better)
Translates to: CRSAHESSRPQERLLSTGPKSLS*GFSTHI
Trigger: AATGTGGGTGGAAAAACCCAAGCTTAGTGATTTGGG...CCCTGTGCTGAGGAGTCTCTCTTGGGGCCTGGAGGACTCATGAGCTGATCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTTCTCCGGGCACTTGGTaGCGGGCTGCGCCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: WLVLFLGLWETSIKALSFSPGTW*RAAPLP
Trigger: AGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGA...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCGGCTGCAGCTTCAGTaGACCAACTTCTCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SLEVASEDHETALWTNKMRLQLQ*TNFSLP
Trigger: TGGGAGGGAGAAGTTGGTCAACTGAAGCTGCAGCCG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCTGTCTGGGGACATGCTaGGAGAATGTATTGTACAAC +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSCLGTC*ENVLYN
Trigger: GTTGTACAATACATTCTCCAAGCATGTCCCCAGACA...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATAGCCAAAATCACGTCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIAKITS*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGACGTGATTTTGGC...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTAGAGACCACAGCAGCTaGGGGAATGGCAAAAACCTG +
Preference number: 5 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRRDHSS*GNGKNL
Trigger: CAGGTTTTTGCCATTCCCCAAGCTGCTGTGGTCTCT...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCCCCACATTAATTTGGTaGCTTGCACATGACAACAGC +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSPTLIW*LAHDNS
Trigger: GCTGTTGTCATGTGCAAGCAACCAAATTAATGTGGG...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp AGTGAGATGATGTTTGTCAAGCCCACCACACAGGGCAAGTTGGTTCCTTCCCGTCCTCAAATGCTGATCTaGTACTTGGGGAGGCTATGC +
Preference number: 5 (lower is better)
Translates to: SEMMFVKPTTQGKLVPSRPQMLI*YLGRLC
Trigger: GCATAGCCTCCCCAAGTACAAGATCAGCATTTGAGG...ACGGGAAGGAACCAACTTGCCCTGTGTGGTGGGCTTGACAAACATCATCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GTTCCCAACCTGGGGTCTCTGTCCTCAGGATTCACACAGGCACTATTGTCAGGACTGGAAGCCTCTGTTTaGTCAGCCATAAAGGGTAAG +
Preference number: 5 (lower is better)
Translates to: VPNLGSLSSGFTQALLSGLEASV*SAIKGK
Trigger: CTTACCCTTTATGGCTGACAAAACAGAGGCTTCCAG...TCCTGACAATAGTGCCTGTGTGAATCCTGAGGACAGAGACCCCAGGTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCAGCTAATACCACTGAGGGGCAGGAGGGCATACTCTCTCTCAGACCCTCATCCAAAAGGACGCTATACTaGTCTCTTGCGGTAGGATTT +
Preference number: 5 (lower is better)
Translates to: PANTTEGQEGILSLRPSSKRTLY*SLAVGF
Trigger: AAATCCTACCGCAAGAGACAAGTATAGCGTCCTTTT...GGATGAGGGTCTGAGAGAGAGTATGCCCTCCTGCCCCTCAGTGGTATTAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CACCTAACCACACCAGGCCGCTATCGCCTGCATGTATCTCGTGTCCAATCGGGGACTTTGGAAAGCACTTaGGCAGTTTCTTATACAGTT +
Preference number: 5 (lower is better)
Translates to: HLTTPGRYRLHVSRVQSGTLEST*AVSYTV
Trigger: AACTGTATAAGAAACTGCCAAAGTGCTTTCCAAAGT...CCCCGATTGGACACGAGATACATGCAGGCGATAGCGGCCTGGTGTGGTTAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp GGGACTCCCTCACATGGACACAAAGCATCAAGGGACAGGCCGGCTTTGCTTTTCTGCTTCATTAAAGCATaGTCATGCCTGTTATCACTC +
Preference number: 5 (lower is better)
Translates to: GTPSHGHKASRDRPALLFCFIKA*SCLLSL
Trigger: GAGTGATAACAGGCATGACAATGCTTTAATGAAGCA...GAAAAGCAAAGCCGGCCTGTCCCTTGATGCTTTGTGTCCATGTGAGGGAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CCCCTCTGTGGCCCTGGAAACTTGGCCCCTTTGAGCTTCAGTCACTTTGTGAAAGGGGATGCGGTGATATaGTTTATAGATACAGAGTTG +
Preference number: 5 (lower is better)
Translates to: PLCGPGNLAPLSFSHFVKGDAVI*FIDTEL
Trigger: CAACTCTGTATCTATAAACAATATCACCGCATCCCC...TTTCACAAAGTGACTGAAGCTCAAAGGGGCCAAGTTTCCAGGGCCACAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp CAGACTTCTTCACAACAAATAGCCCAGAACCAGCTGGGAACTCTCTGGCCCATATTCACACAGGCACTATaGTCAGGAACTACTTCTAGC +
Preference number: 5 (lower is better)
Translates to: QTSSQQIAQNQLGTLWPIFTQAL*SGTTSS
Trigger: GCTAGAAGTAGTTCCTGACAATAGTGCCTGTGTGAA...TATGGGCCAGAGAGTTCCCAGCTGGTTCTGGGCTATTTGTTGTGAAGAAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGGGTGCTGCCTGGTCTaGGTAAAGTCAAGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTGCCLV*VKSRGH
Trigger: ATGGCCTCTTGACTTTACCAAGACCAGGCAGCACCC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTATAGGGATAGGCATTTaGGGTTTGAGACGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTIGIGI*GLRRPF
Trigger: AAAGGGCCGTCTCAAACCCAAAATGCCTATCCCTAT...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TGGCTGGTTTTATTTTTAGGATTATGGGAGACCTCCATCAAGGCTCTTTCTTTTGGCTCTCATCTTCCTTaGCCAACTTCGCCCTCCATT +
Preference number: 5 (lower is better)
Translates to: WLVLFLGLWETSIKALSFGSHLP*PTSPSI
Trigger: AATGGAGGGCGAAGTTGGCAAAGGAAGATGAGAGCC...AAAAGAAAGAGCCTTGATGGAGGTCTCCCATAATCCTAAAAATAAAACCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp TCATTAGAGGTGGCTTCGGAGGACCACGAGACAGCACTATGGACAAACAAAATGCAACAGCATCATTTATaGGTGACAGGATTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: SLEVASEDHETALWTNKMQQHHL*VTGFKD
Trigger: GTCTTTGAATCCTGTCACCAATAAATGATGCTGTTG...CATTTTGTTTGTCCATAGTGCTGTCTCGTGGTCCTCCGAAGCCACCTCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS-3UTR CAA 90 bp ATTTTACCACATCCACAAAGAAACGAACTCCCCACATACCCACAATGTCTCACTGGTAACAGAATCATTTaGCAAAGACACGGACTAGAG +
Preference number: 5 (lower is better)
Translates to: ILPHPQRNELPTYPQCLTGNRII*QRHGLE
Trigger: CTCTAGTCCGTGTCTTTGCAAAATGATTCTGTTACC...AGTGAGACATTGTGGGTATGTGGGGAGTTCGTTTCTTTGTGGATGTGGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CAA 90 bp GCGGGCCCCTTCGGGCCAGCGGGCAGAGGGACGGTCTCCGGGCACTaGGTTGCGGGCTGCGCCCCTGCCTCCGCGCTCCGCAGGTCCGGT +
Preference number: 6 (lower is better)
Translates to: AGPFGPAGRGTVSGH*VAGCAPASALRRSG
Trigger: ACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGCCCGAAGGGGCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CCA 72 bp CCGGGCCCTGGCCGGTTTCCCTCCCCTCGGGCTGACTaGCTCCCGCGCAGCGCTGCTGCCCGCAGGGCTCAG +
Preference number: 6 (lower is better)
Translates to: PGPGRFPSPRAD*LPRSAAARRAQ
Trigger: CTGAGCCCTGCGGGCAGCAGCGCTGCGCGGGAGCCAGTCAGCCCGAGGGGAGGGAAACCGGCCAGGGCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CAA 90 bp GCCCCTTCGGGCCAGCGGGCAGAGGGACGGTCTCCGGGCACTTGGTaGCGGGCTGCGCCCCTGCCTCCGCGCTCCGCAGGTCCGGTCGGT +
Preference number: 6 (lower is better)
Translates to: APSGQRAEGRSPGTW*RAAPLPPRSAGPVG
Trigger: ACCGACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGCCCGAAGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 72 bp GACGGTCTCCGGGCACTTGGTTGCGGGCTGCGCCCCTaGCTCCGCGCTCCGCAGGTCCGGTCGGTCCGGGCA +
Preference number: 6 (lower is better)
Translates to: DGLRALGCGLRP*LRAPQVRSVRA
Trigger: TGCCCGGACCGACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 72 bp GGCAGAGGGACGGTCTCCGGGCACTTGGTTGCGGGCTaGGCCCCTGCCTCCGCGCTCCGCAGGTCCGGTCGG +
Preference number: 6 (lower is better)
Translates to: GRGTVSGHLVAG*APASALRRSGR
Trigger: CCGACCGGACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 72 bp GCCAGCGGGCAGAGGGACGGTCTCCGGGCACTTGGTTaGGGGCTGCGCCCCTGCCTCCGCGCTCCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: ASGQRDGLRALG*GLRPCLRAPQV
Trigger: GACCTGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CCA 72 bp TCGGGCCAGCGGGCAGAGGGACGGTCTCCGGGCACTTaGTTGCGGGCTGCGCCCCTGCCTCCGCGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SGQRAEGRSPGT*LRAAPLPPRSA
Trigger: TGCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGCCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CCA 72 bp ATGATGCCCCCAGTTGCGGGCTCCGGCGGTCTCCGATaGCGGGAGGCAGCGGGCCCCTTCGGGCCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: MMPPVAGSGGLR*REAAGPFGPAG
Trigger: GCCCGCTGGCCCGAAGGGGCCCGCTGCCTCCCGCCATCGGAGACCGCCGGAGCCCGCAACTGGGGGCATCAT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CAA 72 bp TTCGGGCCAGCGGGCAGAGGGACGGTCTCCGGGCACTaGGTTGCGGGCTGCGCCCCTGCCTCCGCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: FGPAGRGTVSGH*VAGCAPASALR
Trigger: GCGGAGCGCGGAGGCAGGGGCGCAGCCCGCAACCAAGTGCCCGGAGACCGTCCCTCTGCCCGCTGGCCCGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 72 bp TGGGAGCAGCCAGGCCCTTCCCTGGGCAAGCCGTGGTaGGCCACCCGCCCATTCCGCAGCGGGAGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: WEQPGPSLGKPW*ATRPFRSGRRP
Trigger: CGGCCGCCTCCCGCTGCGGAATGGGCGGGTGGCTCACCACGGCTTGCCCAGGGAAGGGCCTGGCTGCTCCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 72 bp GACAGCGTGAAGAACAGCGCCACCATGACCAGCATGTaGACCACGCGCGCTCTGCGCCGCGATGCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: DSVKNSATMTSM*TTRALRRDARG
Trigger: CCCGCGAGCATCGCGGCGCAGAGCGCGCGTGGTGCACATGCTGGTCATGGTGGCGCTGTTCTTCACGCTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 72 bp AGCGCCTTCCGCAGGGTCAGCTTCTCGCGGAAAGGGTaGACGATGCAGCGGAACCTTTCCACAGCAATGGCC +
Preference number: 6 (lower is better)
Translates to: SAFRRVSFSRKG*TMQRNLSTAMA
Trigger: GGCCATTGCTGTGGAAAGGTTCCGCTGCATCGTGCACCCTTTCCGCGAGAAGCTGACCCTGCGGAAGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CAA 72 bp GCCGACACAGACATGCCCTGCACCAAGCCGCTCATCTaGCATGTGGCATTGTCGAAGGGCCACCCAGTGATG +
Preference number: 6 (lower is better)
Translates to: ADTDMPCTKPLI*HVALSKGHPVM
Trigger: CATCACTGGGTGGCCCTTCGACAATGCCACATGCAAGATGAGCGGCTTGGTGCAGGGCATGTCTGTGTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 72 bp TTTGTAGCCGGGGTGGCCTCAGTGTTAGTCCCATTCTaGCTTAGGGGCCAACTGCTGTTGGGAGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: FVAGVASVLVPF*LRGQLLLGGWE
Trigger: CTCCCAGCCTCCCAACAGCAGTTGGCCCCTAAGTCAGAATGGGACTAACACTGAGGCCACCCCGGCTACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CAA 90 bp AAAACGGAAGCCGACACAGACATGCCCTGCACCAAGCCGCTCATCTaGCATGTGGCATTGTCGAAGGGCCACCCAGTGATGAGGTTGTCC +
Preference number: 6 (lower is better)
Translates to: KTEADTDMPCTKPLI*HVALSKGHPVMRLS
Trigger: GGACAACCTCATCACTGGGTGGCCCTTCGACAATGCCACATGCAAGATGAGCGGCTTGGTGCAGGGCATGTCTGTGTCGGCTTCCGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS TCA 72 bp TGCAGCGGAACCTTTCCACAGCAATGGCCACCAGTGTaGAAACGGAAGCCGACACAGACATGCCCTGCACCA +
Preference number: 6 (lower is better)
Translates to: CSGTFPQQWPPV*KRKPTQTCPAP
Trigger: TGGTGCAGGGCATGTCTGTGTCGGCTTCCGTTTTCACACTGGTGGCCATTGCTGTGGAAAGGTTCCGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS CAA 72 bp ATGCCCTGCACCAAGCCGCTCATCTTGCATGTGGCATaGTCGAAGGGCCACCCAGTGATGAGGTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: MPCTKPLILHVA*SKGHPVMRLST
Trigger: TGTGGACAACCTCATCACTGGGTGGCCCTTCGACAATGCCACATGCAAGATGAGCGGCTTGGTGCAGGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277942.7
CDS GCA 72 bp ACCAGTGTGAAAACGGAAGCCGACACAGACATGCCCTaGACCAAGCCGCTCATCTTGCATGTGGCATTGTCG +
Preference number: 6 (lower is better)
Translates to: TSVKTEADTDMP*TKPLILHVALS
Trigger: CGACAATGCCACATGCAAGATGAGCGGCTTGGTGCAGGGCATGTCTGTGTCGGCTTCCGTTTTCACACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277942.7