Pregenerated sensors for NPFF (Homo sapiens)
Ensembl gene IDs: ENSG00000139574Ensembl transcript IDs: ENST00000267017.4, ENST00000448979.4
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGAGGGGTTCGCTGTCTTCCTCCGCGGAGAGCTGGTCTTCCTGCTaGCCTCCTGGCCCTTCAGCACAGCCCCCGTCTATTAACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GRGSLSSSAESWSSC*PPGPSAQPPSINSS Trigger: GCTGCTGTTAATAGACGGGGGCTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGAGGAAGACAGCGAACCCCTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000267017.4 |
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| CDS TCA 90 bp | GCTCCGGCCAGGTCTCTCCATTGCCTGGAGCAGGTAGTGCAACAGTaGCCCAGAGGTCTGGGCATCCTGTGGTGGGAGGGGTTCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: APARSLHCLEQVVQQ*PRGLGILWWEGFAV Trigger: GACAGCGAACCCCTCCCACCACAGGATGCCCAGACCTCTGGGTCACTGTTGCACTACCTGCTCCAGGCAATGGAGAGACCTGGCCGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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| CDS CCA 90 bp | GGCAATGGTGATATGGGGATGGGACACACACTCACCGCGGAGAGCTaGTCTTCCTGCTGGCCTCCTGGCCCTTCAGCACAGCCCCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: GNGDMGMGHTLTAES*SSCWPPGPSAQPPS Trigger: AGACGGGGGCTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATCACCATTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CCA 90 bp | ATGGGGATGGGACACACACTCACCGCGGAGAGCTGGTCTTCCTGCTaGCCTCCTGGCCCTTCAGCACAGCCCCCGTCTATTAACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: MGMGHTLTAESWSSC*PPGPSAQPPSINSS Trigger: GCTGCTGTTAATAGACGGGGGCTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS GCA 90 bp | GATATGGGGATGGGACACACACTCACCGCGGAGAGCTGGTCTTCCTaGTGGCCTCCTGGCCCTTCAGCACAGCCCCCGTCTATTAACAGC | + |
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Preference number: 5 (lower is better) Translates to: DMGMGHTLTAESWSS*WPPGPSAQPPSINS Trigger: GCTGTTAATAGACGGGGGCTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS GCA 90 bp | GGTCTGGGCATCCTGTGGTGGGAGGGGTTCGCTGTCTTCCTCCTGTaGCAAGGGGGTATCAGGGAAGGAAGATGGGCAAATACCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: GLGILWWEGFAVFLL*QGGIREGRWANTLD Trigger: GTCCAGGGTATTTGCCCATCTTCCTTCCCTGATACCCCCTTGGCACAGGAGGAAGACAGCGAACCCCTCCCACCACAGGATGCCCAGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CCA 90 bp | AGAGCACAAGTCTCAACCGAAGTAGAGGCAATGGTGATATGGGGATaGGACACACACTCACCGCGGAGAGCTGGTCTTCCTGCTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RAQVSTEVEAMVIWG*DTHSPRRAGLPAGL Trigger: GAGGCCAGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATCACCATTGCCTCTACTTCGGTTGAGACTTGTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CCA 90 bp | GAACCTAGAGCACAAGTCTCAACCGAAGTAGAGGCAATGGTGATATaGGGATGGGACACACACTCACCGCGGAGAGCTGGTCTTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: EPRAQVSTEVEAMVI*GWDTHSPRRAGLPA Trigger: AGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATCACCATTGCCTCTACTTCGGTTGAGACTTGTGCTCTAGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS TCA 90 bp | ATGCAGACATATCAAGGGATGACATGTCACTTCTTCCCAAAGCGTTaGGGGGCAGCCAGGCTCCAGAACTGGGAATTCAGCCCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: MQTYQGMTCHFFPKR*GAARLQNWEFSPSP Trigger: TGGAGAGGGGCTGAATTCCCAGTTCTGGAGCCTGGCTGCCCCTCAACGCTTTGGGAAGAAGTGACATGTCATCCCTTGATATGTCTGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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| CDS TCA 90 bp | TTGACACTTTTGGGTGTGGACCTTGCATGCAGACATATCAAGGGATaGCATGTCACTTCTTCCCAAAGCGTTGAGGGGCAGCCAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LTLLGVDLACRHIKG*HVTSSQSVEGQPGS Trigger: GGAGCCTGGCTGCCCCTCAACGCTTTGGGAAGAAGTGACATGTCATCCCTTGATATGTCTGCATGCAAGGTCCACACCCAAAAGTGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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| CDS GCA 72 bp | GGTTCGCTGTCTTCCTCCGCGGAGAGCTGGTCTTCCTaGTGGCCTCCTGGCCCTTCAGCACAGCCCCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSLSSSAESWSS*WPPGPSAQPPS Trigger: AGACGGGGGCTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGAGGAAGACAGCGAACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000267017.4 |
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| CDS GCA 72 bp | ATGGGACACACACTCACCGCGGAGAGCTGGTCTTCCTaGTGGCCTCCTGGCCCTTCAGCACAGCCCCCGTCT | + |
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Preference number: 6 (lower is better) Translates to: MGHTLTAESWSS*WPPGPSAQPPS Trigger: AGACGGGGGCTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CCA 72 bp | GATATGGGGATGGGACACACACTCACCGCGGAGAGCTaGTCTTCCTGCTGGCCTCCTGGCCCTTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: DMGMGHTLTAES*SSCWPPGPSAQ Trigger: CTGTGCTGAAGGGCCAGGAGGCCAGCAGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CAA 90 bp | TCTGGGGCTGAAACAGGAAGGCTTGGCTCCGGCCAGGTCTCTCCATaGCCTGGAGCAGGTAGTGCAACAGTGACCCAGAGGTCTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SGAETGRLGSGQVSP*PGAGSATVTQRSGH Trigger: ATGCCCAGACCTCTGGGTCACTGTTGCACTACCTGCTCCAGGCAATGGAGAGACCTGGCCGGAGCCAAGCCTTCCTGTTTCAGCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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| CDS CCA 72 bp | GTCTCAACCGAAGTAGAGGCAATGGTGATATGGGGATaGGACACACACTCACCGCGGAGAGCTGGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSTEVEAMVIWG*DTHSPRRAGLP Trigger: AGGAAGACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATCACCATTGCCTCTACTTCGGTTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CCA 72 bp | GCACAAGTCTCAACCGAAGTAGAGGCAATGGTGATATaGGGATGGGACACACACTCACCGCGGAGAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AQVSTEVEAMVI*GWDTHSPRRAG Trigger: ACCAGCTCTCCGCGGTGAGTGTGTGTCCCATCCCCATATCACCATTGCCTCTACTTCGGTTGAGACTTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS CAA 90 bp | CATGCAGACATATCAAGGGATGACATGTCACTTCTTCCCAAAGCGTaGAGGGGCAGCCAGGCTCCAGAACTGGGAATTCAGCCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HADISRDDMSLLPKA*RGSQAPELGIQPLS Trigger: GGAGAGGGGCTGAATTCCCAGTTCTGGAGCCTGGCTGCCCCTCAACGCTTTGGGAAGAAGTGACATGTCATCCCTTGATATGTCTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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| CDS CCA 72 bp | AAGGGGGTATCAGGGAAGGAAGATGGGCAAATACCCTaGACACGTAAGTCACAAGGGGAAGGGACTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: KGVSGKEDGQIP*TRKSQGEGTGF Trigger: GAAGCCAGTCCCTTCCCCTTGTGACTTACGTGTCCAGGGTATTTGCCCATCTTCCTTCCCTGATACCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448979.4 |
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| CDS TCA 72 bp | TATCAAGGGATGACATGTCACTTCTTCCCAAAGCGTTaGGGGGCAGCCAGGCTCCAGAACTGGGAATTCAGC | + |
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Preference number: 6 (lower is better) Translates to: YQGMTCHFFPKR*GAARLQNWEFS Trigger: GCTGAATTCCCAGTTCTGGAGCCTGGCTGCCCCTCAACGCTTTGGGAAGAAGTGACATGTCATCCCTTGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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| CDS TCA 72 bp | TTGGGTGTGGACCTTGCATGCAGACATATCAAGGGATaGCATGTCACTTCTTCCCAAAGCGTTGAGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LGVDLACRHIKG*HVTSSQSVEGQ Trigger: CTGCCCCTCAACGCTTTGGGAAGAAGTGACATGTCATCCCTTGATATGTCTGCATGCAAGGTCCACACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000267017.4 ENST00000448979.4 |
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