RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NPC1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000015520

Ensembl transcript IDs: ENST00000289547.8, ENST00000381160.8, ENST00000423141.1, ENST00000546276.5

Found 902 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCCGTGGATGGCAGACCTGCAGGTGCGCCCTGGAGGGAGTGGCTaGCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTG +
Preference number: 1 (lower is better)
Translates to: RPWMADLQVRPGGSG*RPASHSVGSWPEPL
Trigger: CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 90 bp TTCCTGGGCCCTTCTCTTGCCAGAAAAGGCCGTGGATGGCAGACCTaGAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACA +
Preference number: 1 (lower is better)
Translates to: FLGPSLARKGRGWQT*RCALEGVAADRPPT
Trigger: TGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACGGCCTTTTCTGGCAAGAGAAGGGCCCAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 90 bp CTCTTGCCAGAAAAGGCCGTGGATGGCAGACCTGCAGGTGCGCCCTaGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTG +
Preference number: 1 (lower is better)
Translates to: LLPEKAVDGRPAGAP*REWLPTGLPQRWLL
Trigger: CAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACGGCCTTTTCTGGCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTaGCTCTCTCTGGCCTCCTGTGATATCACACCCAGGGTAGTGGTC +
Preference number: 1 (lower is better)
Translates to: AADRPPTALALGLSL*LSLASCDITPRVVV
Trigger: GACCACTACCCTGGGTGTGATATCACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 90 bp TTCATGCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTaGGGCCTGGGATCCAGGCCCGAGGTGAAGATGGGAGGACCAGCC +
Preference number: 1 (lower is better)
Translates to: FMLLESCPKARVGLV*GLGSRPEVKMGGPA
Trigger: GGCTGGTCCTCCCATCTTCACCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 90 bp GAAACTGGGGACCCACTATGGGAGCAGAGGAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGT +
Preference number: 1 (lower is better)
Translates to: ETGDPLWEQRSHQWC*LDTSRAGHPPVTGS
Trigger: ACTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 90 bp TTGGAAACTGGGGACCCACTATGGGAGCAGAGGAGCCATCAGTGGTaGTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGC +
Preference number: 1 (lower is better)
Translates to: LETGDPLWEQRSHQW*CLDTSRAGHPPVTG
Trigger: GCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGTTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 90 bp GGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGA +
Preference number: 1 (lower is better)
Translates to: GTAQGLGDLETGDPL*EQRSHQWCCLDTSR
Trigger: TCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 90 bp TCCACTGCAGTTCATGCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTaGGCTGGTTTGAGGCCTGGGATCCAGGCCCGAGGTGAAGATGGG +
Preference number: 1 (lower is better)
Translates to: STAVHASGELSKSSG*AGLRPGIQARGEDG
Trigger: CCCATCTTCACCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 90 bp ATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAATGGCCTCCCCTAGGATTTGAGGAG +
Preference number: 1 (lower is better)
Translates to: ISGAAWIPQEQAILQ*QAVSWEWPPLGFEE
Trigger: CTCCTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 90 bp AGCCCAGCCCCAAGAGCTCCCAGCCTTCAGACTCCTGGGTGGCCTTaGCTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAA +
Preference number: 1 (lower is better)
Translates to: SPAPRAPSLQTPGWP*LAATALISIGAGDQ
Trigger: TTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTGGGAGCTCTTGGGGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 90 bp ACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTaGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGG +
Preference number: 1 (lower is better)
Translates to: TAQSQDLHLHCSSCF*RAVQKLGLGWFEAW
Trigger: CCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 90 bp ATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATaGTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAG +
Preference number: 1 (lower is better)
Translates to: MCTAQSQDLHLHCSS*FWRAVQKLGLGWFE
Trigger: CTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 90 bp GGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATaGCCCTGTCCCCCACCCCATTCTCTGGGCCATCTCTGTGGTGGT +
Preference number: 1 (lower is better)
Translates to: GNWRIHGLNITLLAQ*PCPPPHSLGHLCGG
Trigger: ACCACCACAGAGATGGCCCAGAGAATGGGGTGGGGGACAGGGGCATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423141.1
3UTR TCA 90 bp CATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGACTTACTaGCACAGAATTAAGACTTTCGAGAGAGGAACTGAGAAGGGAAAA +
Preference number: 1 (lower is better)
Translates to: HCLCSQGHCYVLKTY*HRIKTFERGTEKGK
Trigger: TTTTCCCTTCTCAGTTCCTCTCTCGAAAGTCTTAATTCTGTGTCAGTAAGTCTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: APWREWLPTGLPQRWLLAQAILQ*QAVSWE
Trigger: TTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 90 bp AGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTaGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCTCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: RCALEGVAADRPPTA*ALGLSLCLSLASCD
Trigger: ATCACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGSHQWC*LDTSRA
Trigger: TGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCGCGCCCTGGAGGGAGTaGCTGCCGACCGGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIAPWRE*LPTGLP
Trigger: TGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGCCTCCCCTAGGATTTaGGGAGGGCGTGTGTCAAGG +
Preference number: 2 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGASPRI*GGRVSR
Trigger: CCTTGACACACGCCCTCCTCAAATCCTAGGGGAGGC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGGCTCCTAGGAAAGTaGGTGAGTGTGGGACAAACA +
Preference number: 2 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPGLLGK*VSVGQT
Trigger: TGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCATCCCCATAACCCTTTaGTTCAGGGCCATAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGIPITL*FRAIEP
Trigger: AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGAT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAG +
Preference number: 2 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGTGDPL*EQRSHQ
Trigger: CTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAG +
Preference number: 2 (lower is better)
Translates to: AADRPPTALALGLSLCLSTGDPL*EQRSHQ
Trigger: CTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGT...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGAGTGTGTCTGTTCCTaGCAACTTCCAGACCCAGGC +
Preference number: 2 (lower is better)
Translates to: AADRPPTALALGLSLCLSECVCS*QLPDPG
Trigger: GCCTGGGTCTGGAAGTTGGCAGGAACAGACACACTC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCAGAGGAGCCATCAGTaGTGCTGCCTGGATACCTCA +
Preference number: 2 (lower is better)
Translates to: AADRPPTALALGLSLCLSQRSHQ*CCLDTS
Trigger: TGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAAGTTGGATGAGAAGTaGGCTCCTAGGAAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: APWREWLPTGLPQRWLLAKLDEK*APRKVS
Trigger: ACTCACTTTCCTAGGAGCCCACTTCTCATCCAACTT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGCAGGTCCCTCAGTACTaGCCCAGCTGCCCCTACCTC +
Preference number: 2 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGQVPQY*PSCPYL
Trigger: GAGGTAGGGGCAGCTGGGCCAGTACTGAGGGACCTG...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
3UTR-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGGGCTCCTAGGAAAGTaGGTGAGTGTGGGACAAACA +
Preference number: 2 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGGLLGK*VSVGQT
Trigger: TGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGCAGGGCCACAAAGGCTaGCATCTGCAGGAGGAAGTC +
Preference number: 2 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQQGHKG*HLQEEV
Trigger: GACTTCCTCCTGCAGATGTCAGCCTTTGTGGCCCTG...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
3UTR-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTGTTCTCAGGGACACTaGTACGTGTTAAAGACTTAC +
Preference number: 2 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGCSQGH*YVLKTY
Trigger: GTAAGTCTTTAACACGTAGCAGTGTCCCTGAGAACA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGCAGTCTCATGGGAATaGCCTCCCCTAGGATTTGAG +
Preference number: 2 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGAVSWE*PPLGFE
Trigger: CTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 90 bp GTTCATGCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTaGAGGCCTGGGATCCAGGCCCGAGGTGAAGATGGGAGGACCAGC +
Preference number: 2 (lower is better)
Translates to: VHASGELSKSSGWAG*RPGIQARGEDGRTS
Trigger: GCTGGTCCTCCCATCTTCACCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWQAILQ*QAVSWE
Trigger: TTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTG...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTATCCCCATAACCCTTTaGTTCAGGGCCATAGAGCCT +
Preference number: 2 (lower is better)
Translates to: AADRPPTALALGLSLCLSIPITL*FRAIEP
Trigger: AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGAT...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCCAGCCTTCAGACTCCTaGGTGGCCTTGACTGGCAGC +
Preference number: 2 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIQPSDS*VALTGS
Trigger: GCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTG...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGACAAAGGCTGACATCTaGAGGAGGAAGTCAAGGATC +
Preference number: 2 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLTKADI*RRKSRI
Trigger: GATCCTTGACTTCCTCCTGCAGATGTCAGCCTTTGT...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
3UTR CAA 90 bp CAGCCCAGCCCCAAGAGCTCCCAGCCTTCAGACTCCTGGGTGGCCTaGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCA +
Preference number: 2 (lower is better)
Translates to: QPSPKSSQPSDSWVA*TGSNSLNKYWSWRP
Trigger: TGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTGGGAGCTCTTGGGGCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSHQWC*LDTSRA
Trigger: TGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGGAGCCATCAGTGGTaGTGCCTGGATACCTCAAGA +
Preference number: 2 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWRSHQW*CLDTSR
Trigger: TCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCGTGGATGGCAGACCTaGAGGTGCGCCCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFRGWQT*RCALEG
Trigger: TCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCATCAGTGGTGCTGCCTaGATACCTCAAGAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIISGAA*IPQEQA
Trigger: GGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGAT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTGTTCTCAGGGACACTaGTACGTGTTAAAGACTTAC +
Preference number: 2 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGCSQGH*YVLKTY
Trigger: GTAAGTCTTTAACACGTAGCAGTGTCCCTGAGAACA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCGTGGATGGCAGACCTaGAGGTGCGCCCTGGAGGGA +
Preference number: 2 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNRGWQT*RCALEG
Trigger: TCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGCAGTCTCATGGGAATaGCCTCCCCTAGGATTTGAG +
Preference number: 2 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSAVSWE*PPLGFE
Trigger: CTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGCCTCCCCTAGGATTTaGGGAGGGCGTGTGTCAAGG +
Preference number: 2 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFASPRI*GGRVSR
Trigger: CCTTGACACACGCCCTCCTCAAATCCTAGGGGAGGC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAA +
Preference number: 2 (lower is better)
Translates to: EKWAPRKVSECGTNMECVQAILQ*QAVSWE
Trigger: TTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCTTGGCCTGAGCCTTTaGCTCTCTCTGGCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFLGLSL*LSLASC
Trigger: ACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCCTGGGCCCTTCTCTTaGCAGAAAAGGCCGTGGATG +
Preference number: 2 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFPGPFS*QKRPWM
Trigger: CATCCACGGCCTTTTCTGGCAAGAGAAGGGCCCAGG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR GCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACAGGAGCCATCAGTGGTaGTGCCTGGATACCTCAAGA +
Preference number: 2 (lower is better)
Translates to: VSECGTNMECVCSCQLPDRSHQW*CLDTSR
Trigger: TCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCAGAGGAGCCATCAGTaGTGCTGCCTGGATACCTCA +
Preference number: 2 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNQRSHQ*CCLDTS
Trigger: TGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCAGAGGAGCCATCAGTaGTGCTGCCTGGATACCTCA +
Preference number: 2 (lower is better)
Translates to: DEKWAPRKVSECGTNMECQRSHQ*CCLDTS
Trigger: TGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCAGCCTTAATAAGTATTaGAGCTGGAGACCAAACCCA +
Preference number: 2 (lower is better)
Translates to: ASGELSKSSGWAGLRPGISLNKY*SWRPNP
Trigger: TGGGTTTGGTCTCCAGCTCCAATACTTATTAAGGCT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR TCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGGGGCTCCTAGGAAAGTaGGTGAGTGTGGGACAAACA +
Preference number: 2 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKGLLGK*VSVGQT
Trigger: TGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCC...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGTGTGGGACAAACATaGAGTGTGTCTGTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFSVGQT*SVSVPA
Trigger: GGCAGGAACAGACACACTCCATGTTTGTCCCACACT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACATCCCCATAACCCTTTaGTTCAGGGCCATAGAGCCT +
Preference number: 2 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNIPITL*FRAIEP
Trigger: AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGAT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACAGTGTGGGACAAACATaGAGTGTGTCTGTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNSVGQT*SVSVPA
Trigger: GGCAGGAACAGACACACTCCATGTTTGTCCCACACT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACAAGTTGGATGAGAAGTaGGCTCCTAGGAAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNKLDEK*APRKVS
Trigger: ACTCACTTTCCTAGGAGCCCACTTCTCATCCAACTT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 72 bp GAAAAGGCCGTGGATGGCAGACCTGCAGGTGCGCCCTaGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGT +
Preference number: 3 (lower is better)
Translates to: EKAVDGRPAGAP*REWLPTGLPQR
Trigger: ACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACGGCCTTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGATCCCCATAACCCTTaGGTTCAGGGCCATAGAGCC +
Preference number: 3 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGDPHNP*VQGHRA
Trigger: GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGATCCCCATAACCCTTaGGTTCAGGGCCATAGAGCC +
Preference number: 3 (lower is better)
Translates to: APWREWLPTGLPQRWLLADPHNP*VQGHRA
Trigger: GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CAA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCAAGGCCTAGGTGACTaGGAAACTGGGGACCCACTA +
Preference number: 3 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGQGLGD*ETGDPL
Trigger: TAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 72 bp CGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTaGCTCTCTCTGGCCTCCTGTGATATCACACCCAGG +
Preference number: 3 (lower is better)
Translates to: RPPTALALGLSL*LSLASCDITPR
Trigger: CCTGGGTGTGATATCACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 72 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTaGCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTA +
Preference number: 3 (lower is better)
Translates to: GHLCGGKATPSP*HGGNPGAGPSV
Trigger: TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
3UTR TCA 72 bp CTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTaGGGCCTGGGATCCAGGCCCGAGGTGAAGATGGGA +
Preference number: 3 (lower is better)
Translates to: LESCPKARVGLV*GLGSRPEVKMG
Trigger: TCCCATCTTCACCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 72 bp GCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAATGGCCTCCCCTAGGA +
Preference number: 3 (lower is better)
Translates to: AAWIPQEQAILQ*QAVSWEWPPLG
Trigger: TCCTAGGGGAGGCCATTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 72 bp GACCCACTATGGGAGCAGAGGAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCAGGCCATCCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: DPLWEQRSHQWC*LDTSRAGHPPV
Trigger: CACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTGCTCCCATAGTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 72 bp GGGCCTTATGAGAGCATCCTTCCTGGGCCCTTCTCTTaGCAGAAAAGGCCGTGGATGGCAGACCTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: GPYESILPGPFS*QKRPWMADLQV
Trigger: CACCTGCAGGTCTGCCATCCACGGCCTTTTCTGGCAAGAGAAGGGCCCAGGAAGGATGCTCTCATAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 72 bp GTTCATGCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTaGGCTGGTTTGAGGCCTGGGATCCAGGCCCGAGGT +
Preference number: 3 (lower is better)
Translates to: VHASGELSKSSG*AGLRPGIQARG
Trigger: ACCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGATCCCCATAACCCTTaGGTTCAGGGCCATAGAGCC +
Preference number: 3 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSDPHNP*VQGHRA
Trigger: GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 72 bp CAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAGTGGTGCTGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: QGLGDLETGDPL*EQRSHQWCCLD
Trigger: ATCCAGGCAGCACCACTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CAA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCGGCCTCCCACAGCGTaGGCTCTTGGCCTGAGCCTT +
Preference number: 3 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNRPPTA*ALGLSL
Trigger: AAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 72 bp ACAGGCAGTCTCATGGGAATGGCCTCCCCTAGGATTTaGGGAGGGCGTGTGTCAAGGGGCAGTCACAAGGAA +
Preference number: 3 (lower is better)
Translates to: TGSLMGMASPRI*GGRVSRGSHKE
Trigger: TTCCTTGTGACTGCCCCTTGACACACGCCCTCCTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 72 bp GCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATaGTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGC +
Preference number: 3 (lower is better)
Translates to: AQSQDLHLHCSS*FWRAVQKLGLG
Trigger: GCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 72 bp CCAAGAGCTCCCAGCCTTCAGACTCCTGGGTGGCCTTaGCTGGCAGCAACAGCCTTAATAAGTATTGGAGCT +
Preference number: 3 (lower is better)
Translates to: PRAPSLQTPGWP*LAATALISIGA
Trigger: AGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTGGGAGCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 72 bp AGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTaGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTT +
Preference number: 3 (lower is better)
Translates to: SQDLHLHCSSCF*RAVQKLGLGWF
Trigger: AAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR-3UTR CAA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCAAGGCCTAGGTGACTaGGAAACTGGGGACCCACTA +
Preference number: 3 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNQGLGD*ETGDPL
Trigger: TAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR GCA 72 bp ATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTaGAGTTCATGCTTCTGGAGAGCTGTCCAAAAGCTC +
Preference number: 3 (lower is better)
Translates to: MCTAQSQDLHLH*SSCFWRAVQKL
Trigger: GAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 72 bp TTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTaGAGACCAAACCCAACACCATTTTCCAGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: LTGSNSLNKYWS*RPNPTPFSRRG
Trigger: GCCCCTCCTGGAAAATGGTGTTGGGTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CCA 72 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTaGAGCTGGAGACCAAACCCAACACCATTTTCCAGG +
Preference number: 3 (lower is better)
Translates to: VALTGSNSLNKY*SWRPNPTPFSR
Trigger: CCTGGAAAATGGTGTTGGGTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 72 bp GGGAAAAGTTGGATGAGAAGTGGGCTCCTAGGAAAGTaGGTGAGTGTGGGACAAACATGGAGTGTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: GKSWMRSGLLGK*VSVGQTWSVSV
Trigger: AACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATCCAACTTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR TCA 72 bp TGTTCTCAGGGACACTGCTACGTGTTAAAGACTTACTaGCACAGAATTAAGACTTTCGAGAGAGGAACTGAG +
Preference number: 3 (lower is better)
Translates to: CSQGHCYVLKTY*HRIKTFERGTE
Trigger: CTCAGTTCCTCTCTCGAAAGTCTTAATTCTGTGTCAGTAAGTCTTTAACACGTAGCAGTGTCCCTGAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGCGCCCTGGAGGGAGTaGCTGCCGACCGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLAPWRE*LPTGLP
Trigger: TGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGCCACCATGACTGCTaGCACCGCCTCCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGHHDC*HRLLSP
Trigger: CGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTGCCCACAGCCAGCGTaGCAGCTGCAGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGCPQPA*QLQGRA
Trigger: TGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCCCACTCCCCACGGCCTaGCCAGGCTCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGPLPTA*PGSKRW
Trigger: CCACCTCTTGGAGCCTGGCCAGGCCGTGGGGAGTGG...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGTGGAGTCGAGGGCCTaGGGGCGGGCTATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAVESRA*GRAMAG
Trigger: TCCTGCCATAGCCCGCCCCCAGGCCCTCGACTCCAC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGCGGGGGCAGCTCCTaGGGCTTGACACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGGGSS*GLTQQQ
Trigger: CTGCTGCTGTGTCAAGCCCCAGGAGCTGCCCCCGCC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCCTGCAGGTGCGCCCTaGAGGGAGTGGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLPAGAP*REWLPT
Trigger: GGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGG...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGATCCAGGCCCGAGGTaGAGATGGGAGGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGDPGPR*RWEDQP
Trigger: GGGCTGGTCCTCCCATCTTCACCTCGGGCCTGGATC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGGCCACCATGACTGCTaGCACCGCCTCCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLGHHDC*HRLLSP
Trigger: CGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCCGCCATCCCAGGTCTaGGAAGGGGTCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPPPSQV*EGVSGE
Trigger: CTCCCCGCTGACCCCTTCCCAGACCTGGGATGGCGG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCGGGCCGGCGTGTTaGACAGGCAGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLACGPAC*TGRTRW
Trigger: CCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCA...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAGCAGGCTTGGGTGTTaGGGCCGGTGTAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLASRLGC*GRCRGG
Trigger: CCCGCCTCTACACCGGCCCCAACACCCAAGCCTGCT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCCTCCTCCCACAGCTTaGCCTGGGCCAGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPPPPTA*PGPDGG
Trigger: ACCCCCGTCTGGCCCAGGCCAAGCTGTGGGAGGAGG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGCCCAGCGTGGCCTTaGAGTCCACCATCACTCGGC +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGPAWP*SPPSLG
Trigger: GCCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGCGGGGGCAGCTCCTaGGGCTTGACACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPGGGSS*GLTQQQ
Trigger: CTGCTGCTGTGTCAAGCCCCAGGAGCTGCCCCCGCC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTAGCCCATGGCAGCCATaGCTGCTCCCAGGACCACGG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPSPWQP*LLPGPR
Trigger: CCGTGGTCCTGGGAGCAGTCATGGCTGCCATGGGCT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGAGACTCGGGAGGGGTaGTTTGGGCAAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAETREG*FGQEAT
Trigger: GGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCACACGCCACACATGGTaGCCACAGCCAGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLATRHTW*PQPAWQ
Trigger: CTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCCCTGCAGGGAGATGTTaGGCTGTGCTTCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGPAGRC*AVLRAT
Trigger: GGTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGG...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCCTGCAGGGAGATGTTaGGCTGTGCTTCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAPAGRC*AVLRAT
Trigger: GGTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCATGGCAGCCATGACTaGTCCCAGGACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAHGSHD*SQDHGH
Trigger: GTGGCCGTGGTCCTGGGAGCAGTCATGGCTGCCATG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAACCGGGAGGCCTCCTaGCTCTTGCTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLANREAS*LLLSRE
Trigger: CTCCCTGGACAGCAAGAGGCAGGAGGCCTCCCGGTT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCATTGTCAGAGCAGGCTaGGCAGCGGGTGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGIVRAG*AAGEEG
Trigger: GCCCTCCTCACCCGCTGCCCAGCCTGCTCTGACAAT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTGTCCAGCCCCTAGCTaGGCCACGCGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGCPAPS*ATRVTL
Trigger: CAATGTGACCCGCGTGGCCCAGCTAGGGGCTGGACA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGTCGGGCGACCATACCTaGAGGTGCCGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLSGDHT*RCRSLS
Trigger: GGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGA...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGGCCCAGCGTGGCCTTaGAGTCCACCATCACTCGGC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLGPAWP*SPPSLG
Trigger: GCCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAGGAGCCCCTCTCCCTaGCCAGGCGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGRSPSP*PGGGSS
Trigger: GGAGCTGCCCCCGCCTGGCCAGGGAGAGGGGCTCCT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCCCTCATTCAGAGGCTaGATCCCACTCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLPSFRG*IPLPTA
Trigger: GGCCGTGGGGAGTGGGATTCAGCCTCTGAATGAGGG...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCCCTCATTCAGAGGCTaGATCCCACTCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPPSFRG*IPLPTA
Trigger: GGCCGTGGGGAGTGGGATTCAGCCTCTGAATGAGGG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGACTCGGGAGGGGTaGTTTGGGCAAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPETREG*FGQEAT
Trigger: GGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCGGGTTGGGCTGGTTTaGGGCCTGGGATCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLRVGLV*GLGSRP
Trigger: GGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTACACGCCACACATGGTaGCCACAGCCAGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPTRHTW*PQPAWQ
Trigger: CTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTGGGGTCCACCATCTTaGTTTTGTCCCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGWGPPS*FCPWRG
Trigger: CCCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCACAGAGGTGCTGTATaGTGCCAGGCCGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAHRGAV*CQAAFG
Trigger: CCCAAAGGCGGCCTGGCAGCATACAGCACCTCTGTG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGCAGTGATGTTGGCTaGCAGCTCTCGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGSSDVG*QLSSCP
Trigger: CGGGCAGCTCGAGAGCTGGCAGCCAACATCACTGCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCCTGGAGGGAGTGGCTaGCGACCGGCCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSPGGSG*RPASHS
Trigger: GCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCACTCCCCACGGCCTaGCCAGGCTCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLPLPTA*PGSKRW
Trigger: CCACCTCTTGGAGCCTGGCCAGGCCGTGGGGAGTGG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGTCCCACAGCTTGGCCTaGGCCAGACGGGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWSHSLA*ARRGSP
Trigger: CGGGGACCCCCGTCTGGCCCAGGCCAAGCTGTGGGA...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTGCACAACAGCATGCTaGGAGCCACCCTGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGCTTAC*EPPCLG
Trigger: CCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCCAGCCTTCAGACTCCTaGGTGGCCTTGACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGQPSDS*VALTGS
Trigger: GCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTG...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGGCCACCACCGGGATaGCAGATAGCACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGRPPPG*QIAPRW
Trigger: CCATCTTGGTGCTATCTGTCATCCCGGTGGTGGCCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGTCCAGGATTCCGCTaGAGTTCTTGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPGPGFR*SSWAPA
Trigger: TGCTGGGGCCCAAGAACTTCAGCGGAATCCTGGACC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCACTCCTGGGTGGCCTTaGCTGGCAGCAACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGTPGWP*LAATAL
Trigger: TAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCCACAACACCTCGAGTaGTCCAGTGCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAPQHLE*SSAAGR
Trigger: CCTTCCTGCTGCACTGGATCACTCGAGGTGTTGTGG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAGCCAGCGTGGCAGCTaGAGGGACGCGCACACGGCT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGSQRGS*RDAHTA
Trigger: AGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGAGATGTTGCGCTGTaGTTCGGGCGACCATACCTG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGDVAL*FGRPYL
Trigger: CAGGTATGGTCGCCCGAAGCACAGCGCAACATCTCC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAGAGGTGCTGTATGCTaGCAGGCCGCCTTTGGGACA +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLARGAVC*QAAFGT
Trigger: TGTCCCAAAGGCGGCCTGGCAGCATACAGCACCTCT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCAAACTCCACAGACATaGCCACCGCCGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAQTPQT*PPPRPG
Trigger: ACCTGGTCTCGGCGGTGGGCATGTCTGTGGAGTTTG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGCCGCCATCCCAGGTCTaGGAAGGGGTCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLPPSQV*EGVSGE
Trigger: CTCCCCGCTGACCCCTTCCCAGACCTGGGATGGCGG...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGTGCGGGCCGGCGTGTTaGACAGGCAGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLCGPAC*TGRTRW
Trigger: CCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCA...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGAGCAGGCTTGGGTGTTaGGGCCGGTGTAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLSRLGC*GRCRGG
Trigger: CCCGCCTCTACACCGGCCCCAACACCCAAGCCTGCT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCATGCCCACAGCCAGCGTaGCAGCTGCAGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPCPQPA*QLQGRA
Trigger: TGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCA...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCACCACTCCCCACGGCCTaGCCAGGCTCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPPLPTA*PGSKRW
Trigger: CCACCTCTTGGAGCCTGGCCAGGCCGTGGGGAGTGG...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCAGCCCTGGAAGAACTaGCCAAGGAGGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPQPWKN*PRRVWV
Trigger: CACCCACACCCTCCTTGGCCAGTTCTTCCAGGGCTG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGCCGTCAGGATCACCTaGTTGGTTCGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGAVRIT*LVRKKG
Trigger: CCCCTTCTTCCGAACCAACCAGGTGATCCTGACGGC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGGAGGAGGCAGGGATaGCCAGGTAAGACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGRRRQG*PGKTAQ
Trigger: CTGAGCAGTCTTACCTGGCCATCCCTGCCTCCTCCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGATGCCAGGCAGGTTaGTCATGGCCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGCQAG*SWPHLQ
Trigger: TTGCAGGTGTGGCCATGACCAACCTGCCTGGCATCC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 72 bp CTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTaGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LEGVAADRPPTA*ALGLSLCLSLA
Trigger: GGCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCCACAAGCAGGATGGTaGCCACAGCGAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPPQAGW*PQRRQS
Trigger: GCTCTGTCTTCGCTGTGGTCACCATCCTGCTTGTGG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGTGTCTGGTTGGCTGTaGGCAGCAGGAGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLVSGWL*AAGACG
Trigger: ACCGCACGCTCCTGCTGCTCACAGCCAACCAGACAC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGAGCCCATGGCAGCCATaGCTGCTCCCAGGACCACGG +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWSPWQP*LLPGPR
Trigger: CCGTGGTCCTGGGAGCAGTCATGGCTGCCATGGGCT...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGATCCAGGCCCGAGGTaGAGATGGGAGGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGDPGPR*RWEDQP
Trigger: GGGCTGGTCCTCCCATCTTCACCTCGGGCCTGGATC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTTGTCAGAGAGGCTGGTaGCCTTCTTGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPCQRGW*PSWGPP
Trigger: TGGTGGACCCCAAGAAGGGCACCAGCCTCTCTGACA...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGACCATACCTGGAGGTaGCGCAGCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLDHTWR*RSLSCS
Trigger: GCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTGCAGGGAGATGTTaGGCTGTGCTTCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLPAGRC*AVLRAT
Trigger: GGTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCGACTTGGGAGGTCTaGCCCATCAGTGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLASTWEV*PISVWL
Trigger: CAACCAGACACTGATGGGGCAGACCTCCCAAGTCGA...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCCCCGTAGTCAGCCATaGAGCTCAGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSPRSQP*SSGPGL
Trigger: CAGCCCTGGCCCTGAGCTGCATGGCTGACTACGGGG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCATGGCAGCCATGACTaGTCCCAGGACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLHGSHD*SQDHGH
Trigger: GTGGCCGTGGTCCTGGGAGCAGTCATGGCTGCCATG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCAAGTTCACAGAGGTaGTGTATGCTGCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLASSSQR*CMLPGR
Trigger: GCGGCCTGGCAGCATACAGCACCTCTGTGAACTTGA...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGTGCCAGCTCTCGAGCTaGCCGCAGAGCTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLCQLSS*PQSFCV
Trigger: TACACAGAAGCTCTGCGGGCAGCTCGAGAGCTGGCA...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGGTCATGGCCACACCTaGAAACACCGCACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGGHGHT*KHRTSH
Trigger: ATGGGAAGTGCGGTGTTTGCAGGTGTGGCCATGACC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGTCATGGCCACACCTaGAAACACCGCACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGHGHT*KHRTSH
Trigger: ATGGGAAGTGCGGTGTTTGCAGGTGTGGCCATGACC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGGAAGACCAAGCCATaGAGCAGGCCCAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLRKTKP*SRPSRV
Trigger: CACTCTGCTGGGCCTGCTGCATGGCTTGGTCTTCCT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGAGTGTGTCTGTTCCTaGCAACTTCCAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAECVCS*QLPDPG
Trigger: GCCTGGGTCTGGAAGTTGGCAGGAACAGACACACTC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCCTGGGCCCTTCTCTTaGCAGAAAAGGCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLPGPFS*QKRPWM
Trigger: CATCCACGGCCTTTTCTGGCAAGAGAAGGGCCCAGG...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTGCGGGCCGGCGTGTTaGACAGGCAGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSCGPAC*TGRTRW
Trigger: CCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCCAGGCTCCAAGAGGTaGAAGGTGATGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPPGSKR*KVMSSG
Trigger: CCCACTGGACATCACCTTCCACCTCTTGGAGCCTGG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTTCTTGCTTTTGTCCCTaGCGGGGGCCACACGGAATC +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPSCFCP*RGPHGI
Trigger: GATTCCGTGTGGCCCCCGCCAGGGACAAAAGCAAGA...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGTCGGGCGACCATACCTaGAGGTGCCGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLSGDHT*RCRSLS
Trigger: GGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGA...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAGCTGGTGGCAAAGATaGGCAGGTCTTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLASWWQR*AGLQLW
Trigger: CCACAGCTGAAGACCTGCCCATCTTTGCCACCAGCT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGGCCCAGCGTGGCCTTaGAGTCCACCATCACTCGGC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGGPAWP*SPPSLG
Trigger: GCCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCTCCGGGGCAGCCTCTaGTACTCGAGAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLALRGSL*YSRTKM
Trigger: CATCTTTGTTCTCGAGTACCAGAGGCTGCCCCGGAG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTCCGCACAGCTGGCATaGGGGTCAGGGCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGSAQLA*GSGPLG
Trigger: TCCTAGGGGCCCTGACCCCCATGCCAGCTGTGCGGA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAAAGGTCCGCACAGCTaGCATGGGGGTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGKGPHS*HGGQGP
Trigger: GGGGCCCTGACCCCCATGCCAGCTGTGCGGACCTTT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGAAAGGTCCGCACAGCTaGCATGGGGGTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLKGPHS*HGGQGP
Trigger: GGGGCCCTGACCCCCATGCCAGCTGTGCGGACCTTT...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGGAGCCCCTCTCCCTaGCCAGGCGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWRSPSP*PGGGSS
Trigger: GGAGCTGCCCCCGCCTGGCCAGGGAGAGGGGCTCCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGGCAGGGCCAGCTCCTaGTCCAGTCCCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSGRASS*SSPTLM
Trigger: CATCAGCGTGGGACTGGACCAGGAGCTGGCCCTGCC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGGCAGGGCCAGCTCCTaGTCCAGTCCCACGCTGATG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGGRASS*SSPTLM
Trigger: CATCAGCGTGGGACTGGACCAGGAGCTGGCCCTGCC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCATCCCAGCCTCGCTaGAGAAGTTGTAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLASSQPR*RSCSPR
Trigger: CCTTGGGCTACAACTTCTCCAGCGAGGCTGGGATGA...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGGAGGAGGCAGGGATaGCCAGGTAAGACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLRRRQG*PGKTAQ
Trigger: CTGAGCAGTCTTACCTGGCCATCCCTGCCTCCTCCT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCCTAGACAGGGCCTCTaGCTGTATCAGAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLPRQGL*LYQNCR
Trigger: GCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGG...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCCAGAGGAGCCATCAGTaGTGCTGCCTGGATACCTCA +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGQRSHQ*CCLDTS
Trigger: TGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTG...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLTGDPL*EQRSHQ
Trigger: CTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGTCCAAAAGCTCGGGTTaGGCTGGTTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLSKSSG*AGLRPG
Trigger: CCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGA...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGTCCGCACAGCTGGCATaGGGGTCAGGGCCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLSAQLA*GSGPLV
Trigger: TACCAGGGGCCCTGACCCCCATGCCAGCTGTGCGGA...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCGTTGGAGAGTGTCATaGGGCTTCCAGACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLRWRVS*GFQTAL
Trigger: CAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACG...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGTGTCTCCCTGGAAGTTaGGCCAGCGCTGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLCLPGS*ASAGHC
Trigger: GCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACA...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGGTCCAGGATTCCGCTaGAGTTCTTGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLGPGFR*SSWAPA
Trigger: TGCTGGGGCCCAAGAACTTCAGCGGAATCCTGGACC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGTGTCTGGTTGGCTGTaGGCAGCAGGAGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSVSGWL*AAGACG
Trigger: ACCGCACGCTCCTGCTGCTCACAGCCAACCAGACAC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGGTGTCTGGTTGGCTGTaGGCAGCAGGAGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWVSGWL*AAGACG
Trigger: ACCGCACGCTCCTGCTGCTCACAGCCAACCAGACAC...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCAGCTGTGGTGCGATTaGTCTCGTCTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPQLWCD*SRLPES
Trigger: GCTCTCTGGAAGACGAGATCAATCGCACCACAGCTG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCGCCTTTGGGACATTTaGTGTTGGGCCGGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPRLWDI*CWAGRS
Trigger: TGAACGACCGGCCCAACATCAAATGTCCCAAAGGCG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGAGACTCGGGAGGGGTaGTTTGGGCAAGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGETREG*FGQEAT
Trigger: GGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGTGGGGTCCACCATCTTaGTTTTGTCCCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLWGPPS*FCPWRG
Trigger: CCCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCA...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAAAGACCAGGCCCGCTaGCAAGGCCACCACCGGGAT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGKDQAR*QGHHRD
Trigger: ATCCCGGTGGTGGCCTTGGCAGCGGGCCTGGTCTTT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCAAAAGACCAGGCCCGCTaGCAAGGCCACCACCGGGAT +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPKDQAR*QGHHRD
Trigger: ATCCCGGTGGTGGCCTTGGCAGCGGGCCTGGTCTTT...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTAAAGACCAGGCCCGCTaGCAAGGCCACCACCGGGAT +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSKDQAR*QGHHRD
Trigger: ATCCCGGTGGTGGCCTTGGCAGCGGGCCTGGTCTTT...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCACCTGCAGGGAGATGTTaGGCTGTGCTTCGGGCGACC +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPPAGRC*AVLRAT
Trigger: GGTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGG...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCACATGGCAGCCATGACTaGTCCCAGGACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPHGSHD*SQDHGH
Trigger: GTGGCCGTGGTCCTGGGAGCAGTCATGGCTGCCATG...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTGCTGGGAGCCACCCTaGCTAGGGCTCGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSCWEPP*LGLAQC
Trigger: ACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGGGCTGCACGTGTTGTaGCAGTGCAGGTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAGLHVL*QCRFTK
Trigger: TTTTGTGAACCTGCACTGCCACAACACGTGCAGCCC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTAAGTTGAGCCAGCGCTaGGCATTGCAAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPKLSQR*ALQRAE
Trigger: CTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAAGGTGATGTCCAGTaGGGCCAGACCATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPEGDVQ*GQTIAC
Trigger: ACAGGCAATGGTCTGGCCCCACTGGACATCACCTTC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGCGTGCGGTTGTTCTaGAAATACTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGSVRLF*KYCRRL
Trigger: CAGCCTCCTGCAGTATTTCCAGAACAACCGCACGCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCCCACAGCTTGGCCTaGGCCAGACGGGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSHSLA*ARRGSP
Trigger: CGGGGACCCCCGTCTGGCCCAGGCCAAGCTGTGGGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGCTCAGGGAACTCTGTaGCATACTGGATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAAQGTL*HTGSSG
Trigger: CCCAGAAGATCCAGTATGCCACAGAGTTCCCTGAGC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGCAGTCTCATGGGAATaGCCTCCCCTAGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAAVSWE*PPLGFE
Trigger: CTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGATCAGTGGTGCTGCCTaGATACCTCAAGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLISGAA*IPQEQA
Trigger: GGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGAT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGCAGGTCCCTCAGTACTaGCCCAGCTGCCCCTACCTC +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLQVPQY*PSCPYL
Trigger: GAGGTAGGGGCAGCTGGGCCAGTACTGAGGGACCTG...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTCAGGTGATCACCTGTaGTCTTGCGGGCCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGSGDHL*SCGPAC
Trigger: ACACGCCGGCCCGCAAGATCACAGGTGATCACCTGA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTGTCTCCCTGGAAGTTaGGCCAGCGCTGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGCLPGS*ASAGHC
Trigger: GCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTGTCTCCCTGGAAGTTaGGCCAGCGCTGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSCLPGS*ASAGHC
Trigger: GCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLQAILQ*QAVSWE
Trigger: TTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGGGCTCCTAGGAAAGTaGGTGAGTGTGGGACAAACA +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLGLLGK*VSVGQT
Trigger: TGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGGCTCTGATTGGGGCTaGACGTGTTGTGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLGSDWG*TCCGSA
Trigger: TGCACTGCCACAACACGTGCAGCCCCAATCAGAGCC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGGACGCGCACACGGCTaGAGGAGTCATAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGGRAHG*RSHSSA
Trigger: AGCAGAGCTATGACTCCTGCAGCCGTGTGCGCGTCC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAAGCCAGCGTGGCAGCTaGAGGGACGCGCACACGGCT +
Preference number: 4 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGSQRGS*RDAHTA
Trigger: AGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCT...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGCCAGCGTGGCAGCTaGAGGGACGCGCACACGGCT +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSQRGS*RDAHTA
Trigger: AGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTACGAAGCCACCCACGTaGCCCAGCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSTKPPT*PSPGRT
Trigger: AGTTCTTCCAGGGCTGGGGCACGTGGGTGGCTTCGT...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGAAGTTGTTGCAGCCTaGACTGGAGCAGATGGCATT +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGEVVAA*TGADGI
Trigger: AATGCCATCTGCTCCAGTGCAGGCTGCAACAACTTC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCACAGAGGTGCTGTATaGTGCCAGGCCGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGHRGAV*CQAAFG
Trigger: CCCAAAGGCGGCCTGGCAGCATACAGCACCTCTGTG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCAAACTCCACAGACATaGCCACCGCCGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLQTPQT*PPPRPG
Trigger: ACCTGGTCTCGGCGGTGGGCATGTCTGTGGAGTTTG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCCGCTTCTGCTCCAGTaGCAGAGCCGGGTTAACGTC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGPLLLQ*QSRVNV
Trigger: GACGTTAACCCGGCTCTGGCACTGGAGCAGAAGCGG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPSHQWC*LDTSRA
Trigger: TGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCCCTGGAGGGAGTGGCTaGCGACCGGCCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIPGGSG*RPASHS
Trigger: GCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGG...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTAGCCACCCCATCTCCCTaGCATGGTGGGAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVATPSP*HGGNPG
Trigger: CCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGTGCGGGCCGGCGTGTTaGACAGGCAGGACACGTTGG +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQCGPAC*TGRTRW
Trigger: CCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCA...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTAAGCAGGCTTGGGTGTTaGGGCCGGTGTAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVSRLGC*GRCRGG
Trigger: CCCGCCTCTACACCGGCCCCAACACCCAAGCCTGCT...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGGCTGCACGTGTTGTaGCAGTGCAGGTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPGLHVL*QCRFTK
Trigger: TTTTGTGAACCTGCACTGCCACAACACGTGCAGCCC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCATACACGCCACACATaGTGCCCACAGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSHTRHT*CPQPAW
Trigger: CCACGCTGGCTGTGGGCACCATGTGTGGCGTGTATG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGATGCAGCACAGTCTTaGCAGGAGCAGGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGDAAQS*QEQVAT
Trigger: CGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGTCCGGGCTTGGCTGTTaGGGGCCGACCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQSGLGC*GPTTAP
Trigger: TGGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGA...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGCCTCCTCCCACAGCTTaGCCTGGGCCAGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGPPPTA*PGPDGG
Trigger: ACCCCCGTCTGGCCCAGGCCAAGCTGTGGGAGGAGG...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCAGCCATCCGACGCTaGAAGGCTCGCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLPAIRR*KARISS
Trigger: AGAGGAAATGCGAGCCTTCCAGCGTCGGATGGCTGG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTCACTCGGCTCCAGCTaGAATAGCTGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSSLGSS*NSCPGP
Trigger: TGGCCCTGGGCAGCTATTCCAGCTGGAGCCGAGTGA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGTCACTCGGCTCCAGCTaGAATAGCTGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWSLGSS*NSCPGP
Trigger: TGGCCCTGGGCAGCTATTCCAGCTGGAGCCGAGTGA...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCTAGGAAGAAGCAGATaGCCTCAGAGAGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPLGRSR*PQRGCT
Trigger: TGTGCAGCCTCTCTGAGGCCATCTGCTTCTTCCTAG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGTGCCAGAAAAGGCCGTaGATGGCAGACCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLCQKRP*MADLQV
Trigger: CACCTGCAGGTCTGCCATCCACGGCCTTTTCTGGCA...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGTCCAAAAGCTCGGGTTaGGCTGGTTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLSKSSG*AGLRPG
Trigger: CCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGA...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 72 bp GGCCCAGGAGGAGGCACTGCCCAAGGCCTAGGTGACTaGGAAACTGGGGACCCACTATGGGAGCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPGGGTAQGLGD*ETGDPLWEQRS
Trigger: GCTCCTCTGCTCCCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGCCCTCATTCAGAGGCTaGATCCCACTCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQPSFRG*IPLPTA
Trigger: GGCCGTGGGGAGTGGGATTCAGCCTCTGAATGAGGG...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCCACAAGCAGGATGGTaGCCACAGCGAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSPQAGW*PQRRQS
Trigger: GCTCTGTCTTCGCTGTGGTCACCATCCTGCTTGTGG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCAAGGCCACCACCGGGATaGCAGATAGCACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPRPPPG*QIAPRW
Trigger: CCATCTTGGTGCTATCTGTCATCCCGGTGGTGGCCT...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGACTGCAGGAGGCTGTTaGTGCAGCAGTCGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLTAGGC*CSSRRD
Trigger: GTCTCTACGACTGCTGCATCAACAGCCTCCTGCAGT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGAACCACTTGCAGGATaGCCAGGGAGGAGCGGATAC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSEPLAG*PGRSGY
Trigger: GTATCCGCTCCTCCCTGGTCATCCTGCAAGTGGTTC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGGGTCAGCCAGTCAATaGAGTCATCCACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSGSASQ*SHPPRR
Trigger: CCTCCTGGGTGGATGACTTCATTGACTGGCTGACCC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCACTCCTGGGTGGCCTTaGCTGGCAGCAACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGTPGWP*LAATAL
Trigger: TAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTCCAGTGATACCAGCTaGTTGGCGGAGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGSSDTS*LAEQQA
Trigger: AGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCAGGCTCTGATTGGGGCTaGACGTGTTGTGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPGSDWG*TCCGSA
Trigger: TGCACTGCCACAACACGTGCAGCCCCAATCAGAGCC...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGGCCAGCGCTGGGCATTaGAAAGGGCAGAGCCATACA +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWASAGH*KGQSHT
Trigger: TGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGC...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGTGGGGCCAGACCATTaGCTGTGTCTCCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGVGPDH*LCLPGS
Trigger: ACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCAC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGTGGGGCCAGACCATTaGCTGTGTCTCCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLVGPDH*LCLPGS
Trigger: ACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCAC...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTAGACCATACCTGGAGGTaGCGCAGCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVDHTWR*RSLSCS
Trigger: GCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTC...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGAAGTTGTTGCAGCCTaGACTGGAGCAGATGGCATT +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLEVVAA*TGADGI
Trigger: AATGCCATCTGCTCCAGTGCAGGCTGCAACAACTTC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGATACTTATGGAACTaGTCCACCGAGGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLRYLWN*STEGLT
Trigger: TGTGAGGCCCTCGGTGGAGCAGTTCCATAAGTATCT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTGCCAGCTCTCGAGCTaGCCGCAGAGCTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGCQLSS*PQSFCV
Trigger: TACACAGAAGCTCTGCGGGCAGCTCGAGAGCTGGCA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAGGAAGACCAAGCCATaGAGCAGGCCCAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGRKTKP*SRPSRV
Trigger: CACTCTGCTGGGCCTGCTGCATGGCTTGGTCTTCCT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCCTCAGCCCGCTTCTaGTCCAGTGCCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSSARF*SSARAG
Trigger: CCCGGCTCTGGCACTGGAGCAGAAGCGGGCTGAGGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCCTGGGCCCTTCTCTTaGCAGAAAAGGCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGPGPFS*QKRPWM
Trigger: CATCCACGGCCTTTTCTGGCAAGAGAAGGGCCCAGG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTCCGCCATCCCAGGTCTaGGAAGGGGTCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSPPSQV*EGVSGE
Trigger: CTCCCCGCTGACCCCTTCCCAGACCTGGGATGGCGG...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTTGCCTGTGTCTCCCTaGAAGTTGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGLPVSP*KLSQRW
Trigger: CCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGCCACGTCGTCACCTTaGGACTCATTGCAACGTGCA +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLATSSP*DSLQRA
Trigger: TGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGCCTGGGGGCGGGCTATaGCAGGACAGGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGPGGGL*QDRMQH
Trigger: GTGCTGCATCCTGTCCTGCCATAGCCCGCCCCCAGG...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTCTTGCTTTTGTCCCTaGCGGGGGCCACACGGAATC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSSCFCP*RGPHGI
Trigger: GATTCCGTGTGGCCCCCGCCAGGGACAAAAGCAAGA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCGGGCGACCATACCTaGAGGTGCCGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSGDHT*RCRSLS
Trigger: GGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGCACAGTACAGAAAATaGTCCTTCCAGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLAAQYRK*SFQSTW
Trigger: CCAAGTCGACTGGAAGGACCATTTTCTGTACTGTGC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGCACAGTACAGAAAATaGTCCTTCCAGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGAQYRK*SFQSTW
Trigger: CCAAGTCGACTGGAAGGACCATTTTCTGTACTGTGC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCCGCACAGCTGGCATaGGGGTCAGGGCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSAQLA*GSGPLG
Trigger: TCCTAGGGGCCCTGACCCCCATGCCAGCTGTGCGGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAAAGGTCCGCACAGCTaGCATGGGGGTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWKGPHS*HGGQGP
Trigger: GGGGCCCTGACCCCCATGCCAGCTGTGCGGACCTTT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGCACTGGAGCAGATaGCATTCATCCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSLHWSR*HSSQPR
Trigger: GCGAGGCTGGGATGAATGCCATCTGCTCCAGTGCAG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGGATGCCAGGCAGGTTaGTCATGGCCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSGCQAG*SWPHLQ
Trigger: TTGCAGGTGTGGCCATGACCAACCTGCCTGGCATCC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTCGGGAGGGGTGATTTaGGCAAGAGGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSSGGVI*ARGHHD
Trigger: GTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTATCCCCATAACCCTTTaGTTCAGGGCCATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPIPITL*FRAIEP
Trigger: AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGAT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGATCTCCCTGCCATGGTaGGAACCCAGGGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQISLPW*EPRGRS
Trigger: GGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGAT...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCGTTGGAGAGTGTCATaGGGCTTCCAGACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSRWRVS*GFQTAL
Trigger: CAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTTGTAATAGGATCAGGTaGTCACCTGTGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPCNRIR*SPVILR
Trigger: CCGCAAGATCACAGGTGATCACCTGATCCTATTACA...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTATGTCTCCCTGGAAGTTaGGCCAGCGCTGGGCATTGC +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVCLPGS*ASAGHC
Trigger: GCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACA...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCACAGCTGTGGTGCGATTaGTCTCGTCTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPQLWCD*SRLPES
Trigger: GCTCTCTGGAAGACGAGATCAATCGCACCACAGCTG...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCAGCTGTGGTGCGATTaGTCTCGTCTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGQLWCD*SRLPES
Trigger: GCTCTCTGGAAGACGAGATCAATCGCACCACAGCTG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGAGCCCATGGCAGCCATaGCTGCTCCCAGGACCACGG +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQSPWQP*LLPGPR
Trigger: CCGTGGTCCTGGGAGCAGTCATGGCTGCCATGGGCT...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCACTCGAGAACAAAGATaGAGATGTTATCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLATREQR*RCYQPP
Trigger: TGGGGGCTGATAACATCTTCATCTTTGTTCTCGAGT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGTCACAGAGCCCATCGTaGTGCTCATGCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLSQSPS*CSCSSL
Trigger: TAAAGAACTGCATGAGCATCACGATGGGCTCTGTGA...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTTCACAGAGCCCATCGTaGTGCTCATGCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPSQSPS*CSCSSL
Trigger: TAAAGAACTGCATGAGCATCACGATGGGCTCTGTGA...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTTCTGTGTAATCCTGTaGGTTTTTCAGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGFCVIL*VFQGLV
Trigger: CACAAGCCCCTGAAAAACTCACAGGATTACACAGAA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTGCCCCACAGGGCCATaGAGCCGACAGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWCPTGP*SRQCPR
Trigger: TCGTGGACACTGTCGGCTTCATGGCCCTGTGGGGCA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTAGAAGAAGATCTGAATaGGCTGGGCCTTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSRRRSE*AGPWRG
Trigger: GCCTCGCCAAGGCCCAGCTCATTCAGATCTTCTTCT...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAACACGCCACACATGGTaGCCACAGCCAGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPTRHTW*PQPAWQ
Trigger: CTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGT...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCACCTTGGGACTCATTaGAACGTGCAACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLHLGTH*NVQPPH
Trigger: ATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCATCGACTTGGGAGGTCTaGCCCATCAGTGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPSTWEV*PISVWL
Trigger: CAACCAGACACTGATGGGGCAGACCTCCCAAGTCGA...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTCGACTTGGGAGGTCTaGCCCATCAGTGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSSTWEV*PISVWL
Trigger: CAACCAGACACTGATGGGGCAGACCTCCCAAGTCGA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTACAAAGGCTGACATCTaGAGGAGGAAGTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPTKADI*RRKSRI
Trigger: GATCCTTGACTTCCTCCTGCAGATGTCAGCCTTTGT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTGGTCATGGCCACACCTaGAAACACCGCACTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSGHGHT*KHRTSH
Trigger: ATGGGAAGTGCGGTGTTTGCAGGTGTGGCCATGACC...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGCGTGGATGGCAGACCTaGAGGTGCGCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQRGWQT*RCALEG
Trigger: TCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACG...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGATCTTCATCTCCACTaGAGTTCATGCTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: APWREWLPTGLPQRWLLADLHLH*SSCFWR
Trigger: TCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGCAGTACTGGCCCAGCTaGCCCTACCTCCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQQYWPS*PYLLPL
Trigger: AAGAGGCAGGAGGTAGGGGCAGCTGGGCCAGTACTG...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTAGCAGGCTTGGGTGTTaGGGCCGGTGTAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSRLGC*GRCRGG
Trigger: CCCGCCTCTACACCGGCCCCAACACCCAAGCCTGCT...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAATTGTCAGAGCAGGCTaGGCAGCGGGTGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPIVRAG*AAGEEG
Trigger: GCCCTCCTCACCCGCTGCCCAGCCTGCTCTGACAAT...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGATGTCCAGCCCCTAGCTaGGCCACGCGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGCPAPS*ATRVTL
Trigger: CAATGTGACCCGCGTGGCCCAGCTAGGGGCTGGACA...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCAGAAGGTGATGTCCAGTaGGGCCAGACCATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPEGDVQ*GQTIAC
Trigger: ACAGGCAATGGTCTGGCCCCACTGGACATCACCTTC...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTCCGGGCTTGGCTGTTaGGGGCCGACCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSGLGC*GPTTAP
Trigger: TGGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCATTCTCACTCCGGGCTTaGCTGTTGGGGGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPFSLRA*LLGADH
Trigger: GTGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAA...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGAGCGTGCGGTTGTTCTaGAAATACTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLSVRLF*KYCRRL
Trigger: CAGCCTCCTGCAGTATTTCCAGAACAACCGCACGCT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCAATGTGGACCTCTCGTaGCTCCCCAGGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGINVDLS*LPRPPG
Trigger: CCCCGGAGGCCTGGGGAGCCACGAGAGGTCCACATT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGAATGTGGACCTCTCGTaGCTCCCCAGGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQNVDLS*LPRPPG
Trigger: CCCCGGAGGCCTGGGGAGCCACGAGAGGTCCACATT...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGGGTCCAGGATTCCGCTaGAGTTCTTGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGGPGFR*SSWAPA
Trigger: TGCTGGGGCCCAAGAACTTCAGCGGAATCCTGGACC...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGTGTCTGGTTGGCTGTaGGCAGCAGGAGCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQVSGWL*AAGACG
Trigger: ACCGCACGCTCCTGCTGCTCACAGCCAACCAGACAC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACAGGGCCACAAAGGCTaGCATCTGCAGGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVQGHKG*HLQEEV
Trigger: GACTTCCTCCTGCAGATGTCAGCCTTTGTGGCCCTG...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCCGGGTTGGGCTGGTTTaGGGCCTGGGATCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRARVGLV*GLGSRP
Trigger: GGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCG...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGCTTGTGATAGGCCATaGACCTGGAGGCTAAAACCT +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLACDRP*TWRLKP
Trigger: AGGTTTTAGCCTCCAGGTTCATGGCCTATCACAAGC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCACCTTGGGACTCATTaGAACGTGCAACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWHLGTH*NVQPPH
Trigger: ATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTG...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTATGGCAGGACAGGATaGAGCACAGTCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGYGRTG*STVLAG
Trigger: TCCTGCCAAGACTGTGCTGCATCCTGTCCTGCCATA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGTATGGCAGGACAGGATaGAGCACAGTCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWYGRTG*STVLAG
Trigger: TCCTGCCAAGACTGTGCTGCATCCTGTCCTGCCATA...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGACGAAGCCACCCACGTaGCCCAGCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWTKPPT*PSPGRT
Trigger: AGTTCTTCCAGGGCTGGGGCACGTGGGTGGCTTCGT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTAGGAGATGTTGCGCTGTaGTTCGGGCGACCATACCTG +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVGDVAL*FGRPYL
Trigger: CAGGTATGGTCGCCCGAAGCACAGCGCAACATCTCC...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGGCTGCACAACAGCATaGTGGGAGCCACCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWGCTTA*WEPPCL
Trigger: TAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCAACCGGGAGGCCTCCTaGCTCTTGCTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGINREAS*LLLSRE
Trigger: CTCCCTGGACAGCAAGAGGCAGGAGGCCTCCCGGTT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGAGAGGCCACCATGACTaGTGCCACCGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQRGHHD*CHRLLS
Trigger: GCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCT...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTAGAGGCCACCATGACTaGTGCCACCGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSRGHHD*CHRLLS
Trigger: GCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCT...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAGGAGCCATCAGTGGTaGTGCCTGGATACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGRSHQW*CLDTSR
Trigger: TCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCAGCCAGGCTGGTGGATaGTTGTGTAAGGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGSQAGG*LCKAHS
Trigger: AGAGTGAGCCTTACACAACCATCCACCAGCCTGGCT...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTGCCCACAGCCAGCGTaGCAGCTGCAGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRACPQPA*QLQGRA
Trigger: TGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCA...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTATTGCCTGTGTCTCCCTaGAAGTTGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVLPVSP*KLSQRW
Trigger: CCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAA...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGATGCAGCACAGTCTTaGCAGGAGCAGGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPDAAQS*QEQVAT
Trigger: CGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATC...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGCAGATAGCACCAAGATaGTCAGAGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLQIAPR*SEATKP
Trigger: TGGCTTCGTGGCCTCTGACCATCTTGGTGCTATCTG...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCGAAATGCTGGTCATaGAAAGCTTTCTCACTCCGG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLPKCWS*KAFSLR
Trigger: CCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCCTCCTCCCACAGCTTaGCCTGGGCCAGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPPPPTA*PGPDGG
Trigger: ACCCCCGTCTGGCCCAGGCCAAGCTGTGGGAGGAGG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTAGGGCTCGCCCAATGTaGACCTCTCGTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSRARPM*TSRGSP
Trigger: TGGGGAGCCACGAGAGGTCCACATTGGGCGAGCCCT...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTGGCGGGGGCAGCTCCTaGGGCTTGACACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPGGGSS*GLTQQQ
Trigger: CTGCTGCTGTGTCAAGCCCCAGGAGCTGCCCCCGCC...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGGAGCCCCTCTCCCTaGCCAGGCGGGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVRSPSP*PGGGSS
Trigger: GGAGCTGCCCCCGCCTGGCCAGGGAGAGGGGCTCCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCAGGGAAGATACTTATaGAACTGCTCCACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGQGRYL*NCSTEG
Trigger: GCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGAGTGTGGGACAAACATaGAGTGTGTCTGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLSVGQT*SVSVPA
Trigger: GGCAGGAACAGACACACTCCATGTTTGTCCCACACT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGCGCCCTGGAGGGAGTaGCTGCCGACCGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFAPWRE*LPTGLP
Trigger: TGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGCGCCCTGGAGGGAGTaGCTGCCGACCGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVAPWRE*LPTGLP
Trigger: TGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 72 bp TCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTaGAGGCCTGGGATCCAGGCCCGAGGTGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: SGELSKSSGWAG*RPGIQARGEDG
Trigger: CCCATCTTCACCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCACAGACTCGCTTCCAGTaGTACCAGCTGCTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPQTRFQ*YQLLGG
Trigger: TCCGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTG...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCACCACAAGCAGGATGGTaGCCACAGCGAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPPQAGW*PQRRQS
Trigger: GCTCTGTCTTCGCTGTGGTCACCATCCTGCTTGTGG...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGGCCACCACCGGGATaGCAGATAGCACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWRPPPG*QIAPRW
Trigger: CCATCTTGGTGCTATCTGTCATCCCGGTGGTGGCCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGGTCCAGGATTCCGCTaGAGTTCTTGGGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQGPGFR*SSWAPA
Trigger: TGCTGGGGCCCAAGAACTTCAGCGGAATCCTGGACC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGGCAAGAGGCCACCATaGCTGCTGCCACCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAGKRPP*LLPPPP
Trigger: AGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGATCCAGTGATACCAGCTaGTTGGCGGAGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGSSDTS*LAEQQA
Trigger: AGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGA...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGATGTCAGAGAGGCTGGTaGCCTTCTTGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGCQRGW*PSWGPP
Trigger: TGGTGGACCCCAAGAAGGGCACCAGCCTCTCTGACA...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGAAGAAGGGGCCGAAATaGTGGTCATGGAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLKKGPK*WSWKAF
Trigger: GAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCCCCGTAGTCAGCCATaGAGCTCAGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPPRSQP*SSGPGL
Trigger: CAGCCCTGGCCCTGAGCTGCATGGCTGACTACGGGG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTGGCCTCAGAGAGGCTaGACAACAGCATGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWWPQRG*TTACWE
Trigger: CTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTGCCAGCTCTCGAGCTaGCCGCAGAGCTTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWCQLSS*PQSFCV
Trigger: TACACAGAAGCTCTGCGGGCAGCTCGAGAGCTGGCA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGTGTTCTCAGGGACACTaGTACGTGTTAAAGACTTAC +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLCSQGH*YVLKTY
Trigger: GTAAGTCTTTAACACGTAGCAGTGTCCCTGAGAACA...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGCTTGGCCTGAGCCTTTaGCTCTCTCTGGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWLGLSL*LSLASC
Trigger: ACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAG...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCCTGGAGGGAGTGGCTaGCGACCGGCCTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDPGGSG*RPASHS
Trigger: GCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGCCAGGCTCCAAGAGGTaGAAGGTGATGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGPGSKR*KVMSSG
Trigger: CCCACTGGACATCACCTTCCACCTCTTGGAGCCTGG...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCCCTGGGGGCGGGCTATaGCAGGACAGGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAPGGGL*QDRMQH
Trigger: GTGCTGCATCCTGTCCTGCCATAGCCCGCCCCCAGG...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGTCTTGCTTTTGTCCCTaGCGGGGGCCACACGGAATC +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGSCFCP*RGPHGI
Trigger: GATTCCGTGTGGCCCCCGCCAGGGACAAAAGCAAGA...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCCGAAATGCTGGTCATaGAAAGCTTTCTCACTCCGG +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSPKCWS*KAFSLR
Trigger: CCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGGCCGTCAGGATCACCTaGTTGGTTCGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGAVRIT*LVRKKG
Trigger: CCCCTTCTTCCGAACCAACCAGGTGATCCTGACGGC...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTCCCACAGCTTGGCCTaGGCCAGACGGGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVSHSLA*ARRGSP
Trigger: CGGGGACCCCCGTCTGGCCCAGGCCAAGCTGTGGGA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGCCAGCCATCCGACGCTaGAAGGCTCGCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGPAIRR*KARISS
Trigger: AGAGGAAATGCGAGCCTTCCAGCGTCGGATGGCTGG...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCTGCACAACAGCATGCTaGGAGCCACCCTGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGICTTAC*EPPCLG
Trigger: CCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCA...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGAACTTGTCCTTATTaGGGCCAGATATATAAAGGC +
Preference number: 4 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGRTCPY*GQIYKG
Trigger: GCCTTTATATATCTGGCCCCAATAAGGACAAGTTCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGCCTAGACAGGGCCTCTaGCTGTATCAGAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWPRQGL*LYQNCR
Trigger: GCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGG...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCCTGCAGGTGCGCCCTaGAGGGAGTGGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFPAGAP*REWLPT
Trigger: GGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTAATAAGTATTaGAGCTGGAGACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: ALEGVAADRPPTALALGLSLNKY*SWRPNP
Trigger: TGGGTTTGGTCTCCAGCTCCAATACTTATTAAGGCT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCCAAAAGCTCGGGTTaGGCTGGTTTGAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSKSSG*AGLRPG
Trigger: CCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 72 bp AGTTCATGCTTCTGGAGAGCTGTCCAAAAGCTCGGGTaGGGCTGGTTTGAGGCCTGGGATCCAGGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SSCFWRAVQKLG*GWFEAWDPGPR
Trigger: CCTCGGGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGCATGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCCAGACTCGCTTCCAGTaGTACCAGCTGCTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIQTRFQ*YQLLGG
Trigger: TCCGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTG...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTCAGACTCGCTTCCAGTaGTACCAGCTGCTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSQTRFQ*YQLLGG
Trigger: TCCGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTG...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGACTGCAGGAGGCTGTTaGTGCAGCAGTCGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGTAGGC*CSSRRD
Trigger: GTCTCTACGACTGCTGCATCAACAGCCTCCTGCAGT...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGACTGCAGGAGGCTGTTaGTGCAGCAGTCGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWTAGGC*CSSRRD
Trigger: GTCTCTACGACTGCTGCATCAACAGCCTCCTGCAGT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGAACCACTTGCAGGATaGCCAGGGAGGAGCGGATAC +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQEPLAG*PGRSGY
Trigger: GTATCCGCTCCTCCCTGGTCATCCTGCAAGTGGTTC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTCAGGGCCACAAAGGCTaGCATCTGCAGGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSQGHKG*HLQEEV
Trigger: GACTTCCTCCTGCAGATGTCAGCCTTTGTGGCCCTG...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGGTCCAGTCCCACGCTaGTGTGGCACATGGAGTAGA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSGPVPR*CGTWSR
Trigger: TCTACTCCATGTGCCACATCAGCGTGGGACTGGACC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR TCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGGGTCAGCCAGTCAATaGAGTCATCCACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQGSASQ*SHPPRR
Trigger: CCTCCTGGGTGGATGACTTCATTGACTGGCTGACCC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCTTCAAAGCTGTGGTTaGCATAGATGTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLLQSCG*HRCCQL
Trigger: CAGCTGACAACATCTATGTCAACCACAGCTTTGAAG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGCCAGCGTGGCAGCTaGAGGGACGCGCACACGGCT +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFSQRGS*RDAHTA
Trigger: AGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGTGGGGCCAGACCATTaGCTGTGTCTCCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQVGPDH*LCLPGS
Trigger: ACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCAC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGGACTCATTGCAACGTaGAACCCCCTCATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQGLIAT*NPLIQR
Trigger: CCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCC...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTAAGAAGGGGCCGAAATaGTGGTCATGGAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: AADRPPTALALGLSLCLSKKGPK*WSWKAF
Trigger: GAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTT...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGAAGAAGGGGCCGAAATaGTGGTCATGGAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWKKGPK*WSWKAF
Trigger: GAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTT...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGTTGTTCTGGAAATACTaGAGGAGGCTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLLFWKY*RRLLMQ
Trigger: CTGCATCAACAGCCTCCTGCAGTATTTCCAGAACAA...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTGCTGGGAGCCACCCTaGCTAGGGCTCGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPCWEPP*LGLAQC
Trigger: ACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTGGCCTCAGAGAGGCTaGACAACAGCATGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSWPQRG*TTACWE
Trigger: CTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCAAGTTCACAGAGGTaGTGTATGCTGCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSSSQR*CMLPGR
Trigger: GCGGCCTGGCAGCATACAGCACCTCTGTGAACTTGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGCAAACTCCACAGACATaGCCACCGCCGAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQQTPQT*PPPRPG
Trigger: ACCTGGTCTCGGCGGTGGGCATGTCTGTGGAGTTTG...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGGCCACCATGACTGCTaGCACCGCCTCCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFGHHDC*HRLLSP
Trigger: CGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTATTGTCAGAGCAGGCTaGGCAGCGGGTGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPIVRAG*AAGEEG
Trigger: GCCCTCCTCACCCGCTGCCCAGCCTGCTCTGACAAT...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTAGGGCTGCACGTGTTGTaGCAGTGCAGGTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVGLHVL*QCRFTK
Trigger: TTTTGTGAACCTGCACTGCCACAACACGTGCAGCCC...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGCCCACAGCCAGCGTaGCAGCTGCAGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVCPQPA*QLQGRA
Trigger: TGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCCACTCCCCACGGCCTaGCCAGGCTCCAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDPLPTA*PGSKRW
Trigger: CCACCTCTTGGAGCCTGGCCAGGCCGTGGGGAGTGG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGTGGAGTCGAGGGCCTaGGGGCGGGCTATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDVESRA*GRAMAG
Trigger: TCCTGCCATAGCCCGCCCCCAGGCCCTCGACTCCAC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGGCTGGTGCCCTTCTTaGGGTCCACCATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWGWCPS*GPPSCF
Trigger: AAAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTCTCACTCCGGGCTTaGCTGTTGGGGGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAFSLRA*LLGADH
Trigger: GTGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAA...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCATCAGGATCACCTGGTTaGTTCGGAAGAAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPSGSPG*FGRRGR
Trigger: TCGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGA...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGAGCGTGCGGTTGTTCTaGAAATACTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQSVRLF*KYCRRL
Trigger: CAGCCTCCTGCAGTATTTCCAGAACAACCGCACGCT...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGGCACAGTACAGAAAATaGTCCTTCCAGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWAQYRK*SFQSTW
Trigger: CCAAGTCGACTGGAAGGACCATTTTCTGTACTGTGC...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGTCCCACAGCTTGGCCTaGGCCAGACGGGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKSHSLA*ARRGSP
Trigger: CGGGGACCCCCGTCTGGCCCAGGCCAAGCTGTGGGA...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAAGCTGGTGGCAAAGATaGGCAGGTCTTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGSWWQR*AGLQLW
Trigger: CCACAGCTGAAGACCTGCCCATCTTTGCCACCAGCT...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTGCAGGTACGAGTCCTTaGGCAGGGCCAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPAGTSP*AGPAPG
Trigger: ACCAGGAGCTGGCCCTGCCCAAGGACTCGTACCTGC...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGCAGGTACGAGTCCTTaGGCAGGGCCAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAAGTSP*AGPAPG
Trigger: ACCAGGAGCTGGCCCTGCCCAAGGACTCGTACCTGC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCCTGCACTGGAGCAGATaGCATTCATCCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGILHWSR*HSSQPR
Trigger: GCGAGGCTGGGATGAATGCCATCTGCTCCAGTGCAG...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGGATGCCAGGCAGGTTaGTCATGGCCACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQGCQAG*SWPHLQ
Trigger: TTGCAGGTGTGGCCATGACCAACCTGCCTGGCATCC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTCGGGAGGGGTGATTTaGGCAAGAGGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSGGVI*ARGHHD
Trigger: GTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGITGDPL*EQRSHQ
Trigger: CTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCCTGCAGGTGCGCCCTaGAGGGAGTGGCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECPAGAP*REWLPT
Trigger: GGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAGG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCACTGCAGGAGGCTGTTaGTGCAGCAGTCGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGITAGGC*CSSRRD
Trigger: GTCTCTACGACTGCTGCATCAACAGCCTCCTGCAGT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCAACTCGAGAACAAAGATaGAGATGTTATCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPTREQR*RCYQPP
Trigger: TGGGGGCTGATAACATCTTCATCTTTGTTCTCGAGT...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGGCAAGAGGCCACCATaGCTGCTGCCACCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVGKRPP*LLPPPP
Trigger: AGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTGCCTCCCCTAGGATTTaGGGAGGGCGTGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPASPRI*GGRVSR
Trigger: CCTTGACACACGCCCTCCTCAAATCCTAGGGGAGGC...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGATCCAGGCCCGAGGTaGAGATGGGAGGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDDPGPR*RWEDQP
Trigger: GGGCTGGTCCTCCCATCTTCACCTCGGGCCTGGATC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGGACTCATTGCAACGTaGAACCCCCTCATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWGLIAT*NPLIQR
Trigger: CCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGTCGACTTGGGAGGTCTaGCCCATCAGTGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQSTWEV*PISVWL
Trigger: CAACCAGACACTGATGGGGCAGACCTCCCAAGTCGA...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTCAAGTTCACAGAGGTaGTGTATGCTGCCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSSSQR*CMLPGR
Trigger: GCGGCCTGGCAGCATACAGCACCTCTGTGAACTTGA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACTCCTCAGCCCGCTTCTaGTCCAGTGCCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDSSARF*SSARAG
Trigger: CCCGGCTCTGGCACTGGAGCAGAAGCGGGCTGAGGA...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCCGCCATCCCAGGTCTaGGAAGGGGTCAGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNPPSQV*EGVSGE
Trigger: CTCCCCGCTGACCCCTTCCCAGACCTGGGATGGCGG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTAAGTTGAGCCAGCGCTaGGCATTGCAAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSKLSQR*ALQRAE
Trigger: CTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTT...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGAAGGTGATGTCCAGTaGGGCCAGACCATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSEGDVQ*GQTIAC
Trigger: ACAGGCAATGGTCTGGCCCCACTGGACATCACCTTC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCGGCTGGTGCCCTTCTTaGGGTCCACCATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIGWCPS*GPPSCF
Trigger: AAAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCC...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACTCCGGGCTTGGCTGTTaGGGGCCGACCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDSGLGC*GPTTAP
Trigger: TGGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGA...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACCGAAATGCTGGTCATaGAAAGCTTTCTCACTCCGG +
Preference number: 4 (lower is better)
Translates to: KATPSPCHGGNPGAGPSVPKCWS*KAFSLR
Trigger: CCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGG...TACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTCAGGATCACCTGGTTaGTTCGGAAGAAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSGSPG*FGRRGR
Trigger: TCGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGTCAGGATCACCTGGTTaGTTCGGAAGAAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQSGSPG*FGRRGR
Trigger: TCGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGA...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCCTCCTCCCACAGCTTaGCCTGGGCCAGACGGGGGT +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKPPPTA*PGPDGG
Trigger: ACCCCCGTCTGGCCCAGGCCAAGCTGTGGGAGGAGG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACAAAGGTCCGCACAGCTaGCATGGGGGTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDKGPHS*HGGQGP
Trigger: GGGGCCCTGACCCCCATGCCAGCTGTGCGGACCTTT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGCATACTGGATCTTCTaGGTGAAGGAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGAYWIF*VKEKLL
Trigger: CAACAACTTCTCCTTCACCCAGAAGATCCAGTATGC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGACTGTGTCTAAAACCTaGCCATCTGAAGTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLTVSKT*PSEVKF
Trigger: GAACTTGACTTCAGATGGCCAGGTTTTAGACACAGT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000289547.8
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGATGTTGTCAGCTGTaGAGACTCGGGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWRCCQL*RLGRGD
Trigger: ATCACCCCTCCCGAGTCTCCACAGCTGACAACATCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGAATAAGTATTGGAGCTaGAGACCAAACCCAACACCA +
Preference number: 4 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLNKYWS*RPNPTP
Trigger: TGGTGTTGGGTTTGGTCTCCAGCTCCAATACTTATT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCAGCCTTCAGACTCCTaGGTGGCCTTGACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPQPSDS*VALTGS
Trigger: GCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGTGTAATAGGATCAGGTaGTCACCTGTGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQCNRIR*SPVILR
Trigger: CCGCAAGATCACAGGTGATCACCTGATCCTATTACA...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCCCTCATTCAGAGGCTaGATCCCACTCCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDPSFRG*IPLPTA
Trigger: GGCCGTGGGGAGTGGGATTCAGCCTCTGAATGAGGG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTAGCCCATGGCAGCCATaGCTGCTCCCAGGACCACGG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSPWQP*LLPGPR
Trigger: CCGTGGTCCTGGGAGCAGTCATGGCTGCCATGGGCT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCAGGGCCACAAAGGCTaGCATCTGCAGGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPQGHKG*HLQEEV
Trigger: GACTTCCTCCTGCAGATGTCAGCCTTTGTGGCCCTG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGCACAACACCTCGAGTaGTCCAGTGCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAAQHLE*SSAAGR
Trigger: CCTTCCTGCTGCACTGGATCACTCGAGGTGTTGTGC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR TCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGGCAAGAGGCCACCATaGCTGCTGCCACCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNGKRPP*LLPPPP
Trigger: AGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTCCAGTGATACCAGCTaGTTGGCGGAGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPSSDTS*LAEQQA
Trigger: AGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTCACCTTGGGACTCATTaGAACGTGCAACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSHLGTH*NVQPPH
Trigger: ATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTG...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAAAGACCAGGCCCGCTaGCAAGGCCACCACCGGGAT +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVKDQAR*QGHHRD
Trigger: ATCCCGGTGGTGGCCTTGGCAGCGGGCCTGGTCTTT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGGAGATGTTGCGCTGTaGTTCGGGCGACCATACCTG +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAGDVAL*FGRPYL
Trigger: CAGGTATGGTCGCCCGAAGCACAGCGCAACATCTCC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCCCCGTAGTCAGCCATaGAGCTCAGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCPRSQP*SSGPGL
Trigger: CAGCCCTGGCCCTGAGCTGCATGGCTGACTACGGGG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGCTGGGAGCCACCCTaGCTAGGGCTCGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVCWEPP*LGLAQC
Trigger: ACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTGGCCTCAGAGAGGCTaGACAACAGCATGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPWPQRG*TTACWE
Trigger: CTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGACAAAGGCTGACATCTaGAGGAGGAAGTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQTKADI*RRKSRI
Trigger: GATCCTTGACTTCCTCCTGCAGATGTCAGCCTTTGT...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAACCGGGAGGCCTCCTaGCTCTTGCTGTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVNREAS*LLLSRE
Trigger: CTCCCTGGACAGCAAGAGGCAGGAGGCCTCCCGGTT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGAAGTTGTTGCAGCCTaGACTGGAGCAGATGGCATT +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWEVVAA*TGADGI
Trigger: AATGCCATCTGCTCCAGTGCAGGCTGCAACAACTTC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGATACTTATGGAACTaGTCCACCGAGGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWRYLWN*STEGLT
Trigger: TGTGAGGCCCTCGGTGGAGCAGTTCCATAAGTATCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTCCTCAGCCCGCTTCTaGTCCAGTGCCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSSARF*SSARAG
Trigger: CCCGGCTCTGGCACTGGAGCAGAAGCGGGCTGAGGA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGAGGCCACCATGACTaGTGCCACCGCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFRGHHD*CHRLLS
Trigger: GCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTGGCTGTATCAGAACTaGCGCCCATTGTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSWLYQN*RPLLGK
Trigger: CTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCTTGGCCTGAGCCTTTaGCTCTCTCTGGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPLGLSL*LSLASC
Trigger: ACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCGTGGATGGCAGACCTaGAGGTGCGCCCTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKRGWQT*RCALEG
Trigger: TCCCTCCAGGGCGCACCTGCAGGTCTGCCATCCACG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCATTGTCAGAGCAGGCTaGGCAGCGGGTGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVIVRAG*AAGEEG
Trigger: GCCCTCCTCACCCGCTGCCCAGCCTGCTCTGACAAT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGGGCTGCACGTGTTGTaGCAGTGCAGGTTCACAAAA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSGLHVL*QCRFTK
Trigger: TTTTGTGAACCTGCACTGCCACAACACGTGCAGCCC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCCAGCCCCTAGCTaGGCCACGCGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVCPAPS*ATRVTL
Trigger: CAATGTGACCCGCGTGGCCCAGCTAGGGGCTGGACA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTGCCTGTGTCTCCCTaGAAGTTGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRALPVSP*KLSQRW
Trigger: CCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAA...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCCTGGGGGCGGGCTATaGCAGGACAGGATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNPGGGL*QDRMQH
Trigger: GTGCTGCATCCTGTCCTGCCATAGCCCGCCCCCAGG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGCAGATAGCACCAAGATaGTCAGAGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQQIAPR*SEATKP
Trigger: TGGCTTCGTGGCCTCTGACCATCTTGGTGCTATCTG...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCCAGATAGCACCAAGATaGTCAGAGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIQIAPR*SEATKP
Trigger: TGGCTTCGTGGCCTCTGACCATCTTGGTGCTATCTG...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCGGGCTTGGCTGTTaGGGGCCGACCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCSGLGC*GPTTAP
Trigger: TGGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCCAGCCATCCGACGCTaGAAGGCTCGCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPPAIRR*KARISS
Trigger: AGAGGAAATGCGAGCCTTCCAGCGTCGGATGGCTGG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTAATGTGGACCTCTCGTaGCTCCCCAGGCCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCNVDLS*LPRPPG
Trigger: CCCCGGAGGCCTGGGGAGCCACGAGAGGTCCACATT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGGGCTCGCCCAATGTaGACCTCTCGTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVRARPM*TSRGSP
Trigger: TGGGGAGCCACGAGAGGTCCACATTGGGCGAGCCCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACTCCGCACAGCTGGCATaGGGGTCAGGGCCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNSAQLA*GSGPLG
Trigger: TCCTAGGGGCCCTGACCCCCATGCCAGCTGTGCGGA...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTCAGGGAAGATACTTATaGAACTGCTCCACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSQGRYL*NCSTEG
Trigger: GCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTG...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTCGGGAGGGGTGATTTaGGCAAGAGGCCACCATGAC +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPSGGVI*ARGHHD
Trigger: GTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCCAGCTGTGGTGCGATTaGTCTCGTCTTCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAQLWCD*SRLPES
Trigger: GCTCTCTGGAAGACGAGATCAATCGCACCACAGCTG...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGTACTCCAGCCTGGGTaGCAGAATGGCAACTGTGTC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAVLQPG*QNGNCV
Trigger: GACACAGTTGCCATTCTGTCACCCAGGCTGGAGTAC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289547.8
CDS-3UTR TCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACTCCGCAGGTCAGCAGTaGTGTTGGCTGCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDSAGQQ*CWLPAL
Trigger: GAGAGCTGGCAGCCAACATCACTGCTGACCTGCGGA...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTCCGCAGGTCAGCAGTaGTGTTGGCTGCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVSAGQQ*CWLPAL
Trigger: GAGAGCTGGCAGCCAACATCACTGCTGACCTGCGGA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACTGCCCCACAGGGCCATaGAGCCGACAGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNCPTGP*SRQCPR
Trigger: TCGTGGACACTGTCGGCTTCATGGCCCTGTGGGGCA...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTGCCCCACAGGGCCATaGAGCCGACAGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCCPTGP*SRQCPR
Trigger: TCGTGGACACTGTCGGCTTCATGGCCCTGTGGGGCA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGGACGCGCACACGGCTaGAGGAGTCATAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFGRAHG*RSHSSA
Trigger: AGCAGAGCTATGACTCCTGCAGCCGTGTGCGCGTCC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGACACGCCACACATGGTaGCCACAGCCAGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKTRHTW*PQPAWQ
Trigger: CTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGACCATACCTGGAGGTaGCGCAGCCTCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCDHTWR*RSLSCS
Trigger: GCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCATGGCAGCCATGACTaGTCCCAGGACCACGGCCAC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCHGSHD*SQDHGH
Trigger: GTGGCCGTGGTCCTGGGAGCAGTCATGGCTGCCATG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGGCTGCACAACAGCATaGTGGGAGCCACCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVGCTTA*WEPPCL
Trigger: TAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCACAGAGGTGCTGTATaGTGCCAGGCCGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVHRGAV*CQAAFG
Trigger: CCCAAAGGCGGCCTGGCAGCATACAGCACCTCTGTG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGCAGTGATGTTGGCTaGCAGCTCTCGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVSSDVG*QLSSCP
Trigger: CGGGCAGCTCGAGAGCTGGCAGCCAACATCACTGCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGAGTGTGTCTGTTCCTaGCAACTTCCAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAECVCS*QLPDPG
Trigger: GCCTGGGTCTGGAAGTTGGCAGGAACAGACACACTC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGTGTCCAGCCCCTAGCTaGGCCACGCGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKCPAPS*ATRVTL
Trigger: CAATGTGACCCGCGTGGCCCAGCTAGGGGCTGGACA...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTAAGTTGAGCCAGCGCTaGGCATTGCAAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPKLSQR*ALQRAE
Trigger: CTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTT...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGATGCAGCACAGTCTTaGCAGGAGCAGGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVDAAQS*QEQVAT
Trigger: CGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCAGCCCTGGAAGAACTaGCCAAGGAGGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVQPWKN*PRRVWV
Trigger: CACCCACACCCTCCTTGGCCAGTTCTTCCAGGGCTG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGTTCTCACTCCGGGCTTaGCTGTTGGGGGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKFSLRA*LLGADH
Trigger: GTGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAA...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTTCTCACTCCGGGCTTaGCTGTTGGGGGCCGACCAC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCFSLRA*LLGADH
Trigger: GTGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAAAGGGGCCGAAATGCTaGTCATGGAAAGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGKGPKC*SWKAFS
Trigger: TGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTT...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACTCACTCGGCTCCAGCTaGAATAGCTGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDSLGSS*NSCPGP
Trigger: TGGCCCTGGGCAGCTATTCCAGCTGGAGCCGAGTGA...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTCACTCGGCTCCAGCTaGAATAGCTGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFSLGSS*NSCPGP
Trigger: TGGCCCTGGGCAGCTATTCCAGCTGGAGCCGAGTGA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCCTCCGGGGCAGCCTCTaGTACTCGAGAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRALRGSL*YSRTKM
Trigger: CATCTTTGTTCTCGAGTACCAGAGGCTGCCCCGGAG...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAGGGCTCGCCCAATGTaGACCTCTCGTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKRARPM*TSRGSP
Trigger: TGGGGAGCCACGAGAGGTCCACATTGGGCGAGCCCT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCATCCCAGCCTCGCTaGAGAAGTTGTAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRASSQPR*RSCSPR
Trigger: CCTTGGGCTACAACTTCTCCAGCGAGGCTGGGATGA...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTCATCCCAGCCTCGCTaGAGAAGTTGTAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPSSQPR*RSCSPR
Trigger: CCTTGGGCTACAACTTCTCCAGCGAGGCTGGGATGA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGAAGGAGCGGGTAATGTaGGACACAAACTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQKERVM*DTNSTD
Trigger: GTCTGTGGAGTTTGTGTCCCACATTACCCGCTCCTT...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCATCCCCATAACCCTTTaGTTCAGGGCCATAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIIPITL*FRAIEP
Trigger: AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGAT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
3UTR CAA 72 bp CCCAAGAGCTCCCAGCCTTCAGACTCCTGGGTGGCCTaGACTGGCAGCAACAGCCTTAATAAGTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: PKSSQPSDSWVA*TGSNSLNKYWS
Trigger: GCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTGGGAGCTCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCCACAAGCAGGATGGTaGCCACAGCGAAGACAGAGC +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVPQAGW*PQRRQS
Trigger: GCTCTGTCTTCGCTGTGGTCACCATCCTGCTTGTGG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGGGTCAGCCAGTCAATaGAGTCATCCACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVGSASQ*SHPPRR
Trigger: CCTCCTGGGTGGATGACTTCATTGACTGGCTGACCC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTTCTGTGTAATCCTGTaGGTTTTTCAGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWFCVIL*VFQGLV
Trigger: CACAAGCCCCTGAAAAACTCACAGGATTACACAGAA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTCCGCAGGTCAGCAGTaGTGTTGGCTGCCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSAGQQ*CWLPAL
Trigger: GAGAGCTGGCAGCCAACATCACTGCTGACCTGCGGA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGCCTCCCCTAGGATTTaGGGAGGGCGTGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCASPRI*GGRVSR
Trigger: CCTTGACACACGCCCTCCTCAAATCCTAGGGGAGGC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGCCTCCCCTAGGATTTaGGGAGGGCGTGTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNASPRI*GGRVSR
Trigger: CCTTGACACACGCCCTCCTCAAATCCTAGGGGAGGC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFQAILQ*QAVSWE
Trigger: TTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCACTCCTGGGTGGCCTTaGCTGGCAGCAACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVTPGWP*LAATAL
Trigger: TAAGGCTGTTGCTGCCAGTCAAGGCCACCCAGGAGT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGCACGTGTTGTGGCAGTaGAGGTTCACAAAATTGTCA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWHVLWQ*RFTKLS
Trigger: TGACAATTTTGTGAACCTGCACTGCCACAACACGTG...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGGCTCTGATTGGGGCTaGACGTGTTGTGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVGSDWG*TCCGSA
Trigger: TGCACTGCCACAACACGTGCAGCCCCAATCAGAGCC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGGACGCGCACACGGCTaGAGGAGTCATAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECGRAHG*RSHSSA
Trigger: AGCAGAGCTATGACTCCTGCAGCCGTGTGCGCGTCC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGTGGGGCCAGACCATTaGCTGTGTCTCCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFVGPDH*LCLPGS
Trigger: ACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCAC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTATGGCAGGACAGGATaGAGCACAGTCTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPYGRTG*STVLAG
Trigger: TCCTGCCAAGACTGTGCTGCATCCTGTCCTGCCATA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTGGGGTCCACCATCTTaGTTTTGTCCCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECWGPPS*FCPWRG
Trigger: CCCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTGTCAGAGAGGCTGGTaGCCTTCTTGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFCQRGW*PSWGPP
Trigger: TGGTGGACCCCAAGAAGGGCACCAGCCTCTCTGACA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTACGAAGCCACCCACGTaGCCCAGCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECTKPPT*PSPGRT
Trigger: AGTTCTTCCAGGGCTGGGGCACGTGGGTGGCTTCGT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGGAGATGTTGCGCTGTaGTTCGGGCGACCATACCTG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDGDVAL*FGRPYL
Trigger: CAGGTATGGTCGCCCGAAGCACAGCGCAACATCTCC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGGCTGCACAACAGCATaGTGGGAGCCACCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECGCTTA*WEPPCL
Trigger: TAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCACAAAGGCTGACATCTaGAGGAGGAAGTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGITKADI*RRKSRI
Trigger: GATCCTTGACTTCCTCCTGCAGATGTCAGCCTTTGT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAGCAGTGATGTTGGCTaGCAGCTCTCGAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKSSDVG*QLSSCP
Trigger: CGGGCAGCTCGAGAGCTGGCAGCCAACATCACTGCT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCCGCTTCTGCTCCAGTaGCAGAGCCGGGTTAACGTC +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECPLLLQ*QSRVNV
Trigger: GACGTTAACCCGGCTCTGGCACTGGAGCAGAAGCGG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCCGCTTCTGCTCCAGTaGCAGAGCCGGGTTAACGTC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCPLLLQ*QSRVNV
Trigger: GACGTTAACCCGGCTCTGGCACTGGAGCAGAAGCGG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTGGCTGTATCAGAACTaGCGCCCATTGTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPWLYQN*RPLLGK
Trigger: CTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRASHQWC*LDTSRA
Trigger: TGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAGGAGCCATCAGTGGTaGTGCCTGGATACCTCAAGA +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRARSHQW*CLDTSR
Trigger: TCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCATACACGCCACACATaGTGCCCACAGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNHTRHT*CPQPAW
Trigger: CCACGCTGGCTGTGGGCACCATGTGTGGCGTGTATG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACTTGCCTGTGTCTCCCTaGAAGTTGAGCCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDLPVSP*KLSQRW
Trigger: CCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAA...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCCAGGCTCCAAGAGGTaGAAGGTGATGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDPGSKR*KVMSSG
Trigger: CCCACTGGACATCACCTTCCACCTCTTGGAGCCTGG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGATGCAGCACAGTCTTaGCAGGAGCAGGTCGCCACG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECDAAQS*QEQVAT
Trigger: CGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTCTTGCTTTTGTCCCTaGCGGGGGCCACACGGAATC +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVSCFCP*RGPHGI
Trigger: GATTCCGTGTGGCCCCCGCCAGGGACAAAAGCAAGA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGCCGTCAGGATCACCTaGTTGGTTCGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVAVRIT*LVRKKG
Trigger: CCCCTTCTTCCGAACCAACCAGGTGATCCTGACGGC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTGCACAACAGCATGCTaGGAGCCACCCTGCCTAGGG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCCTTAC*EPPCLG
Trigger: CCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCTGCACTGGAGCAGATaGCATTCATCCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVLHWSR*HSSQPR
Trigger: GCGAGGCTGGGATGAATGCCATCTGCTCCAGTGCAG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCAGGCAGGTTGGTCATaGCCACACCTGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDQAGWS*PHLQTP
Trigger: CGGTGTTTGCAGGTGTGGCCATGACCAACCTGCCTG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCAGGCAGGTTGGTCATaGCCACACCTGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFQAGWS*PHLQTP
Trigger: CGGTGTTTGCAGGTGTGGCCATGACCAACCTGCCTG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCCTAGACAGGGCCTCTaGCTGTATCAGAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDPRQGL*LYQNCR
Trigger: GCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCAGCCTTCAGACTCCTaGGTGGCCTTGACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNQPSDS*VALTGS
Trigger: GCTGCCAGTCAAGGCCACCCAGGAGTCTGAAGGCTG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTGCAGTTCATGCTTCTaGAGAGCTGTCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSCSSCF*RAVQKL
Trigger: GAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCAGACTCGCTTCCAGTaGTACCAGCTGCTTGGCGGA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKQTRFQ*YQLLGG
Trigger: TCCGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTAGGCCACCACCGGGATaGCAGATAGCACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRPPPG*QIAPRW
Trigger: CCATCTTGGTGCTATCTGTCATCCCGGTGGTGGCCT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAAGATGTACAGGAATATaGCAATGTAGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPRCTGI*QCSWWQ
Trigger: TTGCCACCAGCTACATTGTCATATTCCTGTACATCT...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGAACCACTTGCAGGATaGCCAGGGAGGAGCGGATAC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCEPLAG*PGRSGY
Trigger: GTATCCGCTCCTCCCTGGTCATCCTGCAAGTGGTTC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCAGGGCCACAAAGGCTaGCATCTGCAGGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCQGHKG*HLQEEV
Trigger: GACTTCCTCCTGCAGATGTCAGCCTTTGTGGCCCTG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGCACAACACCTCGAGTaGTCCAGTGCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECAQHLE*SSAAGR
Trigger: CCTTCCTGCTGCACTGGATCACTCGAGGTGTTGTGC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR TCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGTTCTGTGTAATCCTGTaGGTTTTTCAGGGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQFCVIL*VFQGLV
Trigger: CACAAGCCCCTGAAAAACTCACAGGATTACACAGAA...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCGGAAGAAGAAGATCTaGATGAGCTGGGCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDRKKKI*MSWALA
Trigger: CGCCAAGGCCCAGCTCATTCAGATCTTCTTCTTCCG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACCAGGCCATCCTCCAGTaGCAGGCAGTCTCATGGGAA +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNQAILQ*QAVSWE
Trigger: TTCCCATGAGACTGCCTGTCACTGGAGGATGGCCTG...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTCCAGTGATACCAGCTaGTTGGCGGAGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSSDTS*LAEQQA
Trigger: AGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGGCTCTGATTGGGGCTaGACGTGTTGTGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECGSDWG*TCCGSA
Trigger: TGCACTGCCACAACACGTGCAGCCCCAATCAGAGCC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGCCAGCGCTGGGCATTaGAAAGGGCAGAGCCATACA +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNASAGH*KGQSHT
Trigger: TGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGGCCAGCGCTGGGCATTaGAAAGGGCAGAGCCATACA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKASAGH*KGQSHT
Trigger: TGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGC...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGTGTCAGAGAGGCTGGTaGCCTTCTTGGGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKCQRGW*PSWGPP
Trigger: TGGTGGACCCCAAGAAGGGCACCAGCCTCTCTGACA...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTAGAGGTGCTGTATGCTaGCAGGCCGCCTTTGGGACA +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRGAVC*QAAFGT
Trigger: TGTCCCAAAGGCGGCCTGGCAGCATACAGCACCTCT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTAGGAAGACCAAGCCATaGAGCAGGCCCAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRKTKP*SRPSRV
Trigger: CACTCTGCTGGGCCTGCTGCATGGCTTGGTCTTCCT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCTTGGCCTGAGCCTTTaGCTCTCTCTGGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKLGLSL*LSLASC
Trigger: ACAGGAGGCCAGAGAGAGGCAAAGGCTCAGGCCAAG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCGATCTTCATCTCCACTaGAGTTCATGCTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIDLHLH*SSCFWR
Trigger: TCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATC...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGAAGGTGATGTCCAGTaGGGCCAGACCATTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDEGDVQ*GQTIAC
Trigger: ACAGGCAATGGTCTGGCCCCACTGGACATCACCTTC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCCAGGCTCCAAGAGGTaGAAGGTGATGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCPGSKR*KVMSSG
Trigger: CCCACTGGACATCACCTTCCACCTCTTGGAGCCTGG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGCCACGTCGTCACCTTaGGACTCATTGCAACGTGCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVATSSP*DSLQRA
Trigger: TGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGCCGTCAGGATCACCTaGTTGGTTCGGAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECAVRIT*LVRKKG
Trigger: CCCCTTCTTCCGAACCAACCAGGTGATCCTGACGGC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGCTGGTGGCAAAGATaGGCAGGTCTTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFSWWQR*AGLQLW
Trigger: CCACAGCTGAAGACCTGCCCATCTTTGCCACCAGCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGCATACTGGATCTTCTaGGTGAAGGAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQAYWIF*VKEKLL
Trigger: CAACAACTTCTCCTTCACCCAGAAGATCCAGTATGC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGCATACTGGATCTTCTaGGTGAAGGAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSAYWIF*VKEKLL
Trigger: CAACAACTTCTCCTTCACCCAGAAGATCCAGTATGC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAGGAGGAGGCAGGGATaGCCAGGTAAGACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKRRRQG*PGKTAQ
Trigger: CTGAGCAGTCTTACCTGGCCATCCCTGCCTCCTCCT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAAGGAGCGGGTAATGTaGGACACAAACTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAKERVM*DTNSTD
Trigger: GTCTGTGGAGTTTGTGTCCCACATTACCCGCTCCTT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCAGGCAGGTTGGTCATaGCCACACCTGCAAACACCG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECQAGWS*PHLQTP
Trigger: CGGTGTTTGCAGGTGTGGCCATGACCAACCTGCCTG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACATCAGTGGTGCTGCCTaGATACCTCAAGAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDISGAA*IPQEQA
Trigger: GGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGAT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCAGAGGAGCCATCAGTaGTGCTGCCTGGATACCTCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVQRSHQ*CCLDTS
Trigger: TGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCAGAGGAGCCATCAGTaGTGCTGCCTGGATACCTCA +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDQRSHQ*CCLDTS
Trigger: TGAGGTATCCAGGCAGCACCACTGATGGCTCCTCTG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTACTGGGGACCCACTATaGGAGCAGAGGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCTGDPL*EQRSHQ
Trigger: CTGATGGCTCCTCTGCTCCCATAGTGGGTCCCCAGT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTAGTGTGGGACAAACATaGAGTGTGTCTGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPSVGQT*SVSVPA
Trigger: GGCAGGAACAGACACACTCCATGTTTGTCCCACACT...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCAAGTTGGATGAGAAGTaGGCTCCTAGGAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIKLDEK*APRKVS
Trigger: ACTCACTTTCCTAGGAGCCCACTTCTCATCCAACTT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTGCCAGAAAAGGCCGTaGATGGCAGACCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECCQKRP*MADLQV
Trigger: CACCTGCAGGTCTGCCATCCACGGCCTTTTCTGGCA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTGCCAGAAAAGGCCGTaGATGGCAGACCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCCQKRP*MADLQV
Trigger: CACCTGCAGGTCTGCCATCCACGGCCTTTTCTGGCA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAATAAGTATTGGAGCTaGAGACCAAACCCAACACCA +
Preference number: 4 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWNKYWS*RPNPTP
Trigger: TGGTGTTGGGTTTGGTCTCCAGCTCCAATACTTATT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCGTTGGAGAGTGTCATaGGGCTTCCAGACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRWRVS*GFQTAL
Trigger: CAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTGTAATAGGATCAGGTaGTCACCTGTGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPCNRIR*SPVILR
Trigger: CCGCAAGATCACAGGTGATCACCTGATCCTATTACA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCGCCTTTGGGACATTTaGTGTTGGGCCGGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKRLWDI*CWAGRS
Trigger: TGAACGACCGGCCCAACATCAAATGTCCCAAAGGCG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCGCCTTTGGGACATTTaGTGTTGGGCCGGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCRLWDI*CWAGRS
Trigger: TGAACGACCGGCCCAACATCAAATGTCCCAAAGGCG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACAGAAGAAGATCTGAATaGGCTGGGCCTTGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNRRRSE*AGPWRG
Trigger: GCCTCGCCAAGGCCCAGCTCATTCAGATCTTCTTCT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGGACTCATTGCAACGTaGAACCCCCTCATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFGLIAT*NPLIQR
Trigger: CCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGGACTCATTGCAACGTaGAACCCCCTCATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDGLIAT*NPLIQR
Trigger: CCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAAGAAGGGGCCGAAATaGTGGTCATGGAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAKKGPK*WSWKAF
Trigger: GAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCACAAAGGCTGACATCTaGAGGAGGAAGTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRATKADI*RRKSRI
Trigger: GATCCTTGACTTCCTCCTGCAGATGTCAGCCTTTGT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGAGTGTGTCTGTTCCTaGCAACTTCCAGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNECVCS*QLPDPG
Trigger: GCCTGGGTCTGGAAGTTGGCAGGAACAGACACACTC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGCCACGTCGTCACCTTaGGACTCATTGCAACGTGCA +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNATSSP*DSLQRA
Trigger: TGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGGCTGGTGCCCTTCTTaGGGTCCACCATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNGWCPS*GPPSCF
Trigger: AAAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCAGATAGCACCAAGATaGTCAGAGGCCACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVQIAPR*SEATKP
Trigger: TGGCTTCGTGGCCTCTGACCATCTTGGTGCTATCTG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTAAGGGGCCGAAATGCTaGTCATGGAAAGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPKGPKC*SWKAFS
Trigger: TGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTT...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGTCAGGATCACCTGGTTaGTTCGGAAGAAGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKSGSPG*FGRRGR
Trigger: TCGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGA...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACAGCTGGTGGCAAAGATaGGCAGGTCTTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNSWWQR*AGLQLW
Trigger: CCACAGCTGAAGACCTGCCCATCTTTGCCACCAGCT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCTCCGGGGCAGCCTCTaGTACTCGAGAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECLRGSL*YSRTKM
Trigger: CATCTTTGTTCTCGAGTACCAGAGGCTGCCCCGGAG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCCTAGGAAGAAGCAGATaGCCTCAGAGAGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVLGRSR*PQRGCT
Trigger: TGTGCAGCCTCTCTGAGGCCATCTGCTTCTTCCTAG...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGCTCAGGGAACTCTGTaGCATACTGGATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVAQGTL*HTGSSG
Trigger: CCCAGAAGATCCAGTATGCCACAGAGTTCCCTGAGC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCAGGGAAGATACTTATaGAACTGCTCCACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFQGRYL*NCSTEG
Trigger: GCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGATGTTGTCAGCTGTaGAGACTCGGGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVRCCQL*RLGRGD
Trigger: ATCACCCCTCCCGAGTCTCCACAGCTGACAACATCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGCAGTCTCATGGGAATaGCCTCCCCTAGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFAVSWE*PPLGFE
Trigger: CTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGAGCCTTAATAAGTATTaGAGCTGGAGACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQSLNKY*SWRPNP
Trigger: TGGGTTTGGTCTCCAGCTCCAATACTTATTAAGGCT...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTAGCCTTAATAAGTATTaGAGCTGGAGACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSLNKY*SWRPNP
Trigger: TGGGTTTGGTCTCCAGCTCCAATACTTATTAAGGCT...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCACTCGAGAACAAAGATaGAGATGTTATCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRATREQR*RCYQPP
Trigger: TGGGGGCTGATAACATCTTCATCTTTGTTCTCGAGT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCTTCAAAGCTGTGGTTaGCATAGATGTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPLQSCG*HRCCQL
Trigger: CAGCTGACAACATCTATGTCAACCACAGCTTTGAAG...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGGGCTCCTAGGAAAGTaGGTGAGTGTGGGACAAACA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCGLLGK*VSVGQT
Trigger: TGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCACCTTGGGACTCATTaGAACGTGCAACCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECHLGTH*NVQPPH
Trigger: ATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTGGCTGTATCAGAACTaGCGCCCATTGTTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECWLYQN*RPLLGK
Trigger: CTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTAGCCATCAGTGGTGCTaGCTGGATACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSHQWC*LDTSRA
Trigger: TGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGTGGAGTCGAGGGCCTaGGGGCGGGCTATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMVESRA*GRAMAG
Trigger: TCCTGCCATAGCCCGCCCCCAGGCCCTCGACTCCAC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCCGAAATGCTGGTCATaGAAAGCTTTCTCACTCCGG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFPKCWS*KAFSLR
Trigger: CCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAGCGTGCGGTTGTTCTaGAAATACTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKSVRLF*KYCRRL
Trigger: CAGCCTCCTGCAGTATTTCCAGAACAACCGCACGCT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTCTAGGAAGAAGCAGATaGCCTCAGAGAGGCTGCACA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCLGRSR*PQRGCT
Trigger: TGTGCAGCCTCTCTGAGGCCATCTGCTTCTTCCTAG...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGCTCAGGGAACTCTGTaGCATACTGGATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCAQGTL*HTGSSG
Trigger: CCCAGAAGATCCAGTATGCCACAGAGTTCCCTGAGC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACAGATGTTGTCAGCTGTaGAGACTCGGGAGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNRCCQL*RLGRGD
Trigger: ATCACCCCTCCCGAGTCTCCACAGCTGACAACATCT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGCAGTCTCATGGGAATaGCCTCCCCTAGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCAVSWE*PPLGFE
Trigger: CTCAAATCCTAGGGGAGGCCATTCCCATGAGACTGC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTGTAATAGGATCAGGTaGTCACCTGTGATCTTGCGG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFCNRIR*SPVILR
Trigger: CCGCAAGATCACAGGTGATCACCTGATCCTATTACA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAGATGTACAGGAATATaGCAATGTAGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRARCTGI*QCSWWQ
Trigger: TTGCCACCAGCTACATTGTCATATTCCTGTACATCT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGCTTGTGATAGGCCATaGACCTGGAGGTTGAATCCA +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNACDRP*TWRLNP
Trigger: TGGATTCAACCTCCAGGTTCATGGCCTATCACAAGC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000289547.8
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGCTTGTGATAGGCCATaGACCTGGAGGCTAAAACCT +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCACDRP*TWRLKP
Trigger: AGGTTTTAGCCTCCAGGTTCATGGCCTATCACAAGC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGCCCCGTAGTCAGCCATaGAGCTCAGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMPRSQP*SSGPGL
Trigger: CAGCCCTGGCCCTGAGCTGCATGGCTGACTACGGGG...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAAGGGGCCGAAATGCTaGTCATGGAAAGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFKGPKC*SWKAFS
Trigger: TGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGGCCCAGCGTGGCCTTaGAGTCCACCATCACTCGGC +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMGPAWP*SPPSLG
Trigger: GCCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAAGGAGCGGGTAATGTaGGACACAAACTCCACAGAC +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKKERVM*DTNSTD
Trigger: GTCTGTGGAGTTTGTGTCCCACATTACCCGCTCCTT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTGCAGTTCATGCTTCTaGAGAGCTGTCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFCSSCF*RAVQKL
Trigger: GAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGCCCATCTCCCTGCCATaGTGGGAACCCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMPISLP*WEPRGR
Trigger: CCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCACAGAGCCCATCGTaGTGCTCATGCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCSQSPS*CSCSSL
Trigger: TAAAGAACTGCATGAGCATCACGATGGGCTCTGTGA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTTGTTCTGGAAATACTaGAGGAGGCTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: EKWAPRKVSECGTNMECVLFWKY*RRLLMQ
Trigger: CTGCATCAACAGCCTCCTGCAGTATTTCCAGAACAA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTTGTTCTGGAAATACTaGAGGAGGCTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFLFWKY*RRLLMQ
Trigger: CTGCATCAACAGCCTCCTGCAGTATTTCCAGAACAA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGATCTTCATCTCCACTaGAGTTCATGCTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDDLHLH*SSCFWR
Trigger: TCTCCAGAAGCATGAACTGCAGTGGAGATGAAGATC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTAAGGGGCCGAAATGCTaGTCATGGAAAGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCKGPKC*SWKAFS
Trigger: TGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGCACAGTACAGAAAATaGTCCTTCCAGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNAQYRK*SFQSTW
Trigger: CCAAGTCGACTGGAAGGACCATTTTCTGTACTGTGC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACAAGTTGGATGAGAAGTaGGCTCCTAGGAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDKLDEK*APRKVS
Trigger: ACTCACTTTCCTAGGAGCCCACTTCTCATCCAACTT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTGCAGTTCATGCTTCTaGAGAGCTGTCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCCSSCF*RAVQKL
Trigger: GAGCTTTTGGACAGCTCTCCAGAAGCATGAACTGCA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGATGTACAGGAATATaGCAATGTAGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFRCTGI*QCSWWQ
Trigger: TTGCCACCAGCTACATTGTCATATTCCTGTACATCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTACTCGAGAACAAAGATaGAGATGTTATCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCTREQR*RCYQPP
Trigger: TGGGGGCTGATAACATCTTCATCTTTGTTCTCGAGT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCTTCAAAGCTGTGGTTaGCATAGATGTTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKLQSCG*HRCCQL
Trigger: CAGCTGACAACATCTATGTCAACCACAGCTTTGAAG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGGACGCGCACACGGCTaGAGGAGTCATAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMGRAHG*RSHSSA
Trigger: AGCAGAGCTATGACTCCTGCAGCCGTGTGCGCGTCC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGTGGGGTCCACCATCTTaGTTTTGTCCCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMWGPPS*FCPWRG
Trigger: CCCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCA...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGACGAAGCCACCCACGTaGCCCAGCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMTKPPT*PSPGRT
Trigger: AGTTCTTCCAGGGCTGGGGCACGTGGGTGGCTTCGT...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGCATACACGCCACACATaGTGCCCACAGCCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMHTRHT*CPQPAW
Trigger: CCACGCTGGCTGTGGGCACCATGTGTGGCGTGTATG...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGCAGCCCTGGAAGAACTaGCCAAGGAGGGTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMQPWKN*PRRVWV
Trigger: CACCCACACCCTCCTTGGCCAGTTCTTCCAGGGCTG...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAAGTTGGATGAGAAGTaGGCTCCTAGGAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKKLDEK*APRKVS
Trigger: ACTCACTTTCCTAGGAGCCCACTTCTCATCCAACTT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACAATAAGTATTGGAGCTaGAGACCAAACCCAACACCA +
Preference number: 4 (lower is better)
Translates to: VSECGTNMECVCSCQLPDNKYWS*RPNPTP
Trigger: TGGTGTTGGGTTTGGTCTCCAGCTCCAATACTTATT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAGATGTACAGGAATATaGCAATGTAGCTGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKRCTGI*QCSWWQ
Trigger: TTGCCACCAGCTACATTGTCATATTCCTGTACATCT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR TCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGAACCACTTGCAGGATaGCCAGGGAGGAGCGGATAC +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMEPLAG*PGRSGY
Trigger: GTATCCGCTCCTCCCTGGTCATCCTGCAAGTGGTTC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR GCA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACTGTTCTCAGGGACACTaGTACGTGTTAAAGACTTAC +
Preference number: 4 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNCSQGH*YVLKTY
Trigger: GTAAGTCTTTAACACGTAGCAGTGTCCCTGAGAACA...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGAACTTGTCCTTATTaGGGCCAGATATATAAAGGC +
Preference number: 4 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFRTCPY*GQIYKG
Trigger: GCCTTTATATATCTGGCCCCAATAAGGACAAGTTCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGGGGGTCAGGGCCCCTaGTACTCGAGAACAAAGATG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMGGQGP*YSRTKM
Trigger: CATCTTTGTTCTCGAGTACCAGGGGCCCTGACCCCC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGCCCCACCCCATTCTCTaGGCCATCTCTGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMPHPIL*AISVVV
Trigger: TACCACCACAGAGATGGCCCAGAGAATGGGGTGGGG...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR TCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGCGTTGGAGAGTGTCATaGGGCTTCCAGACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMRWRVS*GFQTAL
Trigger: CAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACG...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGAAGTTGAGCCAGCGCTaGGCATTGCAAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMKLSQR*ALQRAE
Trigger: CTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTT...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGCCACGTCGTCACCTTaGGACTCATTGCAACGTGCA +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMATSSP*DSLQRA
Trigger: TGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGGGCTGGTGCCCTTCTTaGGGTCCACCATCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMGWCPS*GPPSCF
Trigger: AAAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCC...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CCA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTAGAACTTGTCCTTATTaGGGCCAGATATATAAAGGC +
Preference number: 4 (lower is better)
Translates to: KWAPRKVSECGTNMECVCRTCPY*GQIYKG
Trigger: GCCTTTATATATCTGGCCCCAATAAGGACAAGTTCT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR GCA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGTTGTTCTGGAAATACTaGAGGAGGCTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMLFWKY*RRLLMQ
Trigger: CTGCATCAACAGCCTCCTGCAGTATTTCCAGAACAA...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTCTCCGGGCTTGGCTGTaGGGGGCCGACCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPLRAWL*GADHSS
Trigger: GGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGAG...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGGCCCAGCGTGGCCTaGGAGTCCACCATCACTCGG +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGRPSVA*ESTITR
Trigger: CCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCAGCAGGTACGAGTCCTaGGGCAGGGCCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGSRYES*GRASSW
Trigger: CCAGGAGCTGGCCCTGCCCAAGGACTCGTACCTGCT...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCCGGCCTCCCACAGCGTaGGCTCTTGGCCTGAGCCTT +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGRPPTA*ALGLSL
Trigger: AAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCG...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCGGATGCAGCACAGTCTaGGCAGGAGCAGGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGGCSTV*AGAGRH
Trigger: GTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCC...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTTTCTCACTCCGGGCTaGGCTGTTGGGGGCCGACCA +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGFLTPG*AVGGRP
Trigger: TGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAAA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCCTGCAGGGAGATGTaGCGCTGTGCTTCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGSCREM*RCASGD
Trigger: GTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGGA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGGATGCAGCACAGTCTaGGCAGGAGCAGGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: ALEGVAADRPPTALALGLGCSTV*AGAGRH
Trigger: GTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCCTCCGGGCTTGGCTGTaGGGGGCCGACCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGLRAWL*GADHSS
Trigger: GGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGAG...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCTCCGGGCTTGGCTGTaGGGGGCCGACCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWLRAWL*GADHSS
Trigger: GGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGAG...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTCCGGGCTTGGCTGTaGGGGGCCGACCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSLRAWL*GADHSS
Trigger: GGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGAG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCCAGCCAGGTGGGCTaGGTGCTGATGGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGSSQVG*VLMAKE
Trigger: CTCCTTTGCCATCAGCACCAAGCCCACCTGGCTGGA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGGCGGAGCAGCAGGCTaGGGTGTTGGGGCCGGTGTA +
Preference number: 5 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLGGAAG*GVGAGV
Trigger: TACACCGGCCCCAACACCCAAGCCTGCTGCTCCGCC...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGTGTCTCCCTGGAAGTaGAGCCAGCGCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: ALEGVAADRPPTALALGLVSPWK*SQRWAL
Trigger: CAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACAC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAGGCTGGTGCCCTTCTaGGGGTCCACCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: APWREWLPTGLPQRWLLARLVPF*GSTILL
Trigger: AAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGTCCTTCCAGTCGACTaGGGAGGTCTGCCCCATCAG +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPVLPVD*GGLPHQ
Trigger: CTGATGGGGCAGACCTCCCAAGTCGACTGGAAGGAC...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCCGCCTTTGGGACATTaGATGTTGGGCCGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: APWREWLPTGLPQRWLLAPPLGH*MLGRSF
Trigger: GAACGACCGGCCCAACATCAAATGTCCCAAAGGCGG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 90 bp GGAGCGGATACCCAAGTAGGAGAAGAAGCCCATGGCAGCCATGACTaGTCCCAGGACCACGGCCACCCCGCCGAGGCCCAGCGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: GADTQVGEEAHGSHD*SQDHGHPAEAQRGL
Trigger: AAGGCCACGCTGGGCCTCGGCGGGGTGGCCGTGGTCCTGGGAGCAGTCATGGCTGCCATGGGCTTCTTCTCCTACTTGGGTATCCGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp GGAGACTCGGGAGGGGTGATTTGGGCAAGAGGCCACCATGACTGCTaGCACCGCCTCCTCAGCCCGCTTCTGCTCCAGTGCCAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GDSGGVIWARGHHDC*HRLLSPLLLQCQSR
Trigger: CCGGCTCTGGCACTGGAGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGCAGGCTGGTGGATGGTaGTGTAAGGCTCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: ALEGVAADRPPTALALGLQAGGW*CKAHSG
Trigger: CCCAGAGTGAGCCTTACACAACCATCCACCAGCCTG...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTTTGGGGCTGCACGTGTaGTGGCAGTGCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPLGLHV*WQCRFT
Trigger: TGTGAACCTGCACTGCCACAACACGTGCAGCCCCAA...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGGCTGGTGCCCTTCTaGGGGTCCACCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: ALEGVAADRPPTALALGLRLVPF*GSTILL
Trigger: AAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCT...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGAGGCCCAGCGTGGCCTaGGAGTCCACCATCACTCGG +
Preference number: 5 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWRPSVA*ESTITR
Trigger: CCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCCT...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCGTGAAGGAGAAGTTGTaGCAGCCTGCACTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: APWREWLPTGLPQRWLLAVKEKL*QPALEQ
Trigger: CTGCTCCAGTGCAGGCTGCAACAACTTCTCCTTCAC...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTAGGTCAGCAGTGATGTaGGCTGCCAGCTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPRSAVM*AASSRA
Trigger: AGCTCGAGAGCTGGCAGCCAACATCACTGCTGACCT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCCAGAACTGCCGCCCATaGTTGGGCAAGAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: APWREWLPTGLPQRWLLAQNCRP*LGKKLL
Trigger: CAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTG...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCCAGAACTGCCGCCCATaGTTGGGCAAGAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGQNCRP*LGKKLL
Trigger: CAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTG...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCGGCCTCCCACAGCGTaGGCTCTTGGCCTGAGCCTT +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSRPPTA*ALGLSL
Trigger: AAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTCGGGTTGGGCTGGTTaGAGGCCTGGGATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSSGWAG*RPGIQA
Trigger: GGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 90 bp AGAGCCATACACGCCACACATGGTGCCCACAGCCAGCGTGGCAGCTaGAGGGACGCGCACACGGCTGCAGGAGTCATAGCTCTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: RAIHATHGAHSQRGS*RDAHTAAGVIALLG
Trigger: GCCGAGCAGAGCTATGACTCCTGCAGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGTATGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp GAAGGTGGAGTCGAGGGCCTGGGGGCGGGCTATGGCAGGACAGGATaGAGCACAGTCTTGGCAGGAGCAGGTCGCCACGTCGTCACCTTG +
Preference number: 5 (lower is better)
Translates to: EGGVEGLGAGYGRTG*STVLAGAGRHVVTL
Trigger: CAAGGTGACGACGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCCTGTCCTGCCATAGCCCGCCCCCAGGCCCTCGACTCCACCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp AGATGGCCTCAGAGAGGCTGCACAACAGCATGCTGGGAGCCACCCTaGCTAGGGCTCGCCCAATGTGGACCTCTCGTGGCTCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: RWPQRGCTTACWEPP*LGLAQCGPLVAPQA
Trigger: GGCCTGGGGAGCCACGAGAGGTCCACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGGACAGGCAGGACACGTaGGAGAGTGTCATGAGGCTT +
Preference number: 5 (lower is better)
Translates to: ALEGVAADRPPTALALGLDRQDT*ESVMRL
Trigger: AAGCCTCATGACACTCTCCAACGTGTCCTGCCTGTC...CAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGCGGGTGAGGAGGGCCTaGGTGATCGACAGACTCGCT +
Preference number: 5 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLRVRRA*VIDRLA
Trigger: AGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCG...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTTCACCTTGGGACTCATaGCAACGTGCAACCCCCTCA +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPSPWDS*QRATPS
Trigger: TGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGA...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGGATGCAGCACAGTCTaGGCAGGAGCAGGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLGCSTV*AGAGRH
Trigger: GTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCC...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGGTGGAGAAGCTGAGCTaGTCAGAGAGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLVEKLS*SERLVP
Trigger: GGGCACCAGCCTCTCTGACAAGCTCAGCTTCTCCAC...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCCCATTTCTCACTCCGGGCTaGGCTGTTGGGGGCCGACCA +
Preference number: 5 (lower is better)
Translates to: PISLPWWEPRGRSLSTGPFLTPG*AVGGRP
Trigger: TGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAAA...TGGGCCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTAGCAGGAGCGTGCGGTaGTTCTGGAAATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPSRSVR*FWKYCR
Trigger: CCTGCAGTATTTCCAGAACAACCGCACGCTCCTGCT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAAGGTGAGCGGGGCATaGGCACAGTACAGAAAATGG +
Preference number: 5 (lower is better)
Translates to: APWREWLPTGLPQRWLLAKVSGA*AQYRKW
Trigger: CCATTTTCTGTACTGTGCCAATGCCCCGCTCACCTT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTGCAGGTGCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTTGTTGGGCAAGAAGTaGCTGATGGCACCAGCACCT +
Preference number: 5 (lower is better)
Translates to: LQVRPGGSGCRPASHSVGLLGKK*LMAPAP
Trigger: AGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAA...GCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGCACCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCAACTGCCGCCCATTGTaGGGCAAGAAGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: APWREWLPTGLPQRWLLANCRPL*GKKLLM
Trigger: CATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTT...GGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp GCAGCGGGTGAGGAGGGCCTTGGTGATCGACAGACTCGCTTCCAGTaGTACCAGCTGCTTGGCGGAGCAGCAGGCTTGGGTGTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: AAGEEGLGDRQTRFQ*YQLLGGAAGLGVGA
Trigger: GGCCCCAACACCCAAGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 90 bp CAGCTGTGGAGACTCGGGAGGGGTGATTTGGGCAAGAGGCCACCATaGCTGCTGCCACCGCCTCCTCAGCCCGCTTCTGCTCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: QLWRLGRGDLGKRPP*LLPPPPQPASAPVP
Trigger: TGGCACTGGAGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTCCACAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 90 bp CGCTGTGCTTCGGGCGACCATACCTGGAGGTGCCGCAGCCTCTCCTaGAGCTCTAGCAGCTCCAGCAGCAAGTCCAGGTCCAGGATTCCG +
Preference number: 5 (lower is better)
Translates to: RCASGDHTWRCRSLS*SSSSSSSKSRSRIP
Trigger: CGGAATCCTGGACCTGGACTTGCTGCTGGAGCTGCTAGAGCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGAAGCACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp TGTGGAGACTCGGGAGGGGTGATTTGGGCAAGAGGCCACCATGACTaGTGCCACCGCCTCCTCAGCCCGCTTCTGCTCCAGTGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: CGDSGGVIWARGHHD*CHRLLSPLLLQCQS
Trigger: GCTCTGGCACTGGAGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp CCCCACGGCCTGGCCAGGCTCCAAGAGGTGGAAGGTGATGTCCAGTaGGGCCAGACCATTGCCTGTGTCTCCCTGGAAGTTGAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PHGLARLQEVEGDVQ*GQTIACVSLEVEPA
Trigger: CGCTGGCTCAACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCACTGGACATCACCTTCCACCTCTTGGAGCCTGGCCAGGCCGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCAGGCTGGTGGATGGTaGTGTAAGGCTCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLQAGGW*CKAHSG
Trigger: CCCAGAGTGAGCCTTACACAACCATCCACCAGCCTG...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGAGCCAGCGCTGGGCATaGCAAAGGGCAGAGCCATAC +
Preference number: 5 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWSQRWA*QRAEPY
Trigger: GTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCT...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCGCCACGTCGTCACCTaGGGACTCATTGCAACGTGC +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSRHVVT*GLIATC
Trigger: GCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTCCACCATCTTGCTTTaGTCCCTGGCGGGGGCCACA +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSSTILL*SLAGAT
Trigger: TGTGGCCCCCGCCAGGGACAAAAGCAAGATGGTGGA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCTTGGGGTCCACCATCTaGCTTTTGTCCCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGLGSTI*LLSLAG
Trigger: CCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCAA...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGAGGCTGGTGCCCTTCTaGGGGTCCACCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLRLVPF*GSTILL
Trigger: AAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGATTCCGCTGAAGTTCTaGGGCCCCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLIPLKF*GPSSRE
Trigger: CTCTCTGCTGCTGGGGCCCAAGAACTTCAGCGGAAT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGTCCTTCCAGTCGACTaGGGAGGTCTGCCCCATCAG +
Preference number: 5 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLVLPVD*GGLPHQ
Trigger: CTGATGGGGCAGACCTCCCAAGTCGACTGGAAGGAC...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp CGCCCTGGAGGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTAAGGTGAGCGGGGCATaGGCACAGTACAGAAAATGG +
Preference number: 5 (lower is better)
Translates to: RPGGSGCRPASHSVGSWPKVSGA*AQYRKW
Trigger: CCATTTTCTGTACTGTGCCAATGCCCCGCTCACCTT...AGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCCTCCAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCTGGCGCTGCCAGGCCGCCTTaGGGACATTTGATGTTGGGC +
Preference number: 5 (lower is better)
Translates to: RPASHSVGSWPEPLPLSGAARPP*GHLMLG
Trigger: GCCCAACATCAAATGTCCCAAAGGCGGCCTGGCAGC...GCCAGAGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGACCGCCGAGACCAGGTaGATGAGGGACACAGCATTG +
Preference number: 5 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLTAETR*MRDTAL
Trigger: CAATGCTGTGTCCCTCATCAACCTGGTCTCGGCGGT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp AAAGGGCAGAGCCATACACGCCACACATGGTGCCCACAGCCAGCGTaGCAGCTGCAGGGACGCGCACACGGCTGCAGGAGTCATAGCTCT +
Preference number: 5 (lower is better)
Translates to: KGQSHTRHTWCPQPA*QLQGRAHGCRSHSS
Trigger: AGAGCTATGACTCCTGCAGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGTATGGCTCTGCCCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 90 bp ATGTCCTGCAGGGAGATGTTGCGCTGTGCTTCGGGCGACCATACCTaGAGGTGCCGCAGCCTCTCCTGCAGCTCTAGCAGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: MSCREMLRCASGDHT*RCRSLSCSSSSSSS
Trigger: GCTGCTGGAGCTGCTAGAGCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS-3UTR CAA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGCAGGCTGGTGGATGGTaGTGTAAGGCTCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWQAGGW*CKAHSG
Trigger: CCCAGAGTGAGCCTTACACAACCATCCACCAGCCTG...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGGCGGAGCAGCAGGCTaGGGTGTTGGGGCCGGTGTA +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSGGAAG*GVGAGV
Trigger: TACACCGGCCCCAACACCCAAGCCTGCTGCTCCGCC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTTTGGGGCTGCACGTGTaGTGGCAGTGCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSLGLHV*WQCRFT
Trigger: TGTGAACCTGCACTGCCACAACACGTGCAGCCCCAA...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGAGGCTGGTGCCCTTCTaGGGGTCCACCATCTTGCTT +
Preference number: 5 (lower is better)
Translates to: ATPSPCHGGNPGAGPSVLRLVPF*GSTILL
Trigger: AAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCT...CAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAGGCCCAGCGTGGCCTaGGAGTCCACCATCACTCGG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWRPSVA*ESTITR
Trigger: CCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCCT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 90 bp GCAGGAGCAGGTCGCCACGTCGTCACCTTGGGACTCATTGCAACGTaGAACCCCCTCATTCAGAGGCTGAATCCCACTCCCCACGGCCTG +
Preference number: 5 (lower is better)
Translates to: AGAGRHVVTLGLIAT*NPLIQRLNPTPHGL
Trigger: CAGGCCGTGGGGAGTGGGATTCAGCCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACCTGCTCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp CCCCTAGGAAGAAGCAGATGGCCTCAGAGAGGCTGCACAACAGCATaGTGGGAGCCACCCTGCCTAGGGCTCGCCCAATGTGGACCTCTC +
Preference number: 5 (lower is better)
Translates to: PLGRSRWPQRGCTTA*WEPPCLGLAQCGPL
Trigger: GAGAGGTCCACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCATCTGCTTCTTCCTAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp GGGGCCAGACCATTGCCTGTGTCTCCCTGGAAGTTGAGCCAGCGCTaGGCATTGCAAAGGGCAGAGCCATACACGCCACACATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GARPLPVSPWKLSQR*ALQRAEPYTPHMVP
Trigger: GGGCACCATGTGTGGCGTGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAATGGTCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCTTGCGGGCCGGCGTGTaGGACAGGCAGGACACGTTG +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGILRAGV*DRQDTL
Trigger: CAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAA...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGGTCCCTCAGTACTGGTCACCTTGGGACTCATaGCAACGTGCAACCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PPHLPAMVGTQGQVPQYWSPWDS*QRATPS
Trigger: TGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGA...CCAGTACTGAGGGACCTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGCGCCACGTCGTCACCTaGGGACTCATTGCAACGTGC +
Preference number: 5 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQRHVVT*GLIATC
Trigger: GCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCG...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGTCCACCATCTTGCTTTaGTCCCTGGCGGGGGCCACA +
Preference number: 5 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQSTILL*SLAGAT
Trigger: TGTGGCCCCCGCCAGGGACAAAAGCAAGATGGTGGA...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGATCCTGCAGGGAGATGTaGCGCTGTGCTTCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGSCREM*RCASGD
Trigger: GTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGGA...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGGCAGCTCCTGGGGCTaGACACAGCAGCAGACGTCC +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSGSSWG*TQQQTS
Trigger: GGACGTCTGCTGCTGTGTCAAGCCCCAGGAGCTGCC...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGGCAGCTCCTGGGGCTaGACACAGCAGCAGACGTCC +
Preference number: 5 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQGSSWG*TQQQTS
Trigger: GGACGTCTGCTGCTGTGTCAAGCCCCAGGAGCTGCC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGCCTCTCTCAAGGCCTAGGTGACTaGGAAACTGGGGACCCACTA +
Preference number: 5 (lower is better)
Translates to: AADRPPTALALGLSLCLSQGLGD*ETGDPL
Trigger: TAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTG...AGAGAGGCAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp CTAGGAAGAAGCAGATGGCCTCAGAGAGGCTGCACAACAGCATGCTaGGAGCCACCCTGCCTAGGGCTCGCCCAATGTGGACCTCTCGTG +
Preference number: 5 (lower is better)
Translates to: LGRSRWPQRGCTTAC*EPPCLGLAQCGPLV
Trigger: CACGAGAGGTCCACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCATCTGCTTCTTCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTCGGGTGAGGAGGGCCTaGGTGATCGACAGACTCGCT +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSRVRRA*VIDRLA
Trigger: AGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCG...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp TCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGGGGCAGTTGGGGCTGCACGTGTaGTGGCAGTGCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: SVVVKPPHLPAMVGTQGQLGLHV*WQCRFT
Trigger: TGTGAACCTGCACTGCCACAACACGTGCAGCCCCAA...CTGCCCCTGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGTGTCTCCCTGGAAGTaGAGCCAGCGCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWVSPWK*SQRWAL
Trigger: CAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACAC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAGTGTCTCCCTGGAAGTaGAGCCAGCGCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGVSPWK*SQRWAL
Trigger: CAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACAC...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGATTGGGGTCCACCATCTaGCTTTTGTCCCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGLGSTI*LLSLAG
Trigger: CCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCAA...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp TCTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGGTGGAGAAGCTGAGCTaGTCAGAGAGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SLGHLCGGKATPSPCHGGVEKLS*SERLVP
Trigger: GGGCACCAGCCTCTCTGACAAGCTCAGCTTCTCCAC...CCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCTTTCTCACTCCGGGCTaGGCTGTTGGGGGCCGACCA +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIFLTPG*AVGGRP
Trigger: TGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAAA...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAGTCAGGATCACCTGGTaGGTTCGGAAGAAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPVRITW*VRKKGP
Trigger: CGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGAC...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCTCCTGCAGGGAGATGTaGCGCTGTGCTTCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGISCREM*RCASGD
Trigger: GTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGGA...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAAGGGCTGTGCCATCCTaGAAGGTGAGCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGRAVPS*KVSGAL
Trigger: CAATGCCCCGCTCACCTTCAAGGATGGCACAGCCCT...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCCAGCCAGGTGGGCTaGGTGCTGATGGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSSQVG*VLMAKE
Trigger: CTCCTTTGCCATCAGCACCAAGCCCACCTGGCTGGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGTCCAAAAGCTCGGGTaGGGCTGGTTTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWVQKLG*GWFEAW
Trigger: CCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGAC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp CCTCAAAAGCCGGGTCTGTTCCAGGCACTTTCCGCAGGTCAGCAGTaGTGTTGGCTGCCAGCTCTCGAGCTGCCCGCAGAGCTTCTGTGT +
Preference number: 5 (lower is better)
Translates to: PQKPGLFQALSAGQQ*CWLPALELPAELLC
Trigger: ACACAGAAGCTCTGCGGGCAGCTCGAGAGCTGGCAGCCAACATCACTGCTGACCTGCGGAAAGTGCCTGGAACAGACCCGGCTTTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp TCTTCCCACATTCGTCATAGAAGGCGCAGTAGCCAGGCTGGTGGATaGTTGTGTAAGGCTCACTCTGGGCCAAGCGCAGGAGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: SSHIRHRRRSSQAGG*LCKAHSGPSAGAGP
Trigger: GGGCCCTGCTCCTGCGCTTGGCCCAGAGTGAGCCTTACACAACCATCCACCAGCCTGGCTACTGCGCCTTCTATGACGAATGTGGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 90 bp GCCGTCAGGATCACCTGGTTGGTTCGGAAGAAGGGGCCGAAATGCTaGTCATGGAAAGCTTTCTCACTCCGGGCTTGGCTGTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: AVRITWLVRKKGPKC*SWKAFSLRAWLLGA
Trigger: GGCCCCCAACAGCCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 90 bp TCCAGCCAGGTGGGCTTGGTGCTGATGGCAAAGGAGCGGGTAATGTaGGACACAAACTCCACAGACATGCCCACCGCCGAGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SSQVGLVLMAKERVM*DTNSTDMPTAETRL
Trigger: CAACCTGGTCTCGGCGGTGGGCATGTCTGTGGAGTTTGTGTCCCACATTACCCGCTCCTTTGCCATCAGCACCAAGCCCACCTGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp GTTGACATAGATGTTGTCAGCTGTGGAGACTCGGGAGGGGTGATTTaGGCAAGAGGCCACCATGACTGCTGCCACCGCCTCCTCAGCCCG +
Preference number: 5 (lower is better)
Translates to: VDIDVVSCGDSGGVI*ARGHHDCCHRLLSP
Trigger: CGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTCCACAGCTGACAACATCTATGTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTTGGGGTCCACCATCTaGCTTTTGTCCCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSLGSTI*LLSLAG
Trigger: CCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCAA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCGTGGAGAAGCTGAGCTaGTCAGAGAGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIVEKLS*SERLVP
Trigger: GGGCACCAGCCTCTCTGACAAGCTCAGCTTCTCCAC...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCGTCAGGATCACCTGGTaGGTTCGGAAGAAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIVRITW*VRKKGP
Trigger: CGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGAC...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCAATTCCGCTGAAGTTCTaGGGCCCCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPIPLKF*GPSSRE
Trigger: CTCTCTGCTGCTGGGGCCCAAGAACTTCAGCGGAAT...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAGCAGGTACGAGTCCTaGGGCAGGGCCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRASRYES*GRASSW
Trigger: CCAGGAGCTGGCCCTGCCCAAGGACTCGTACCTGCT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGCCGCCTTTGGGACATTaGATGTTGGGCCGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWPPLGH*MLGRSF
Trigger: GAACGACCGGCCCAACATCAAATGTCCCAAAGGCGG...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCGCTGCCAGGCCGCCTTaGGGACATTTGATGTTGGGC +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIAARPP*GHLMLG
Trigger: GCCCAACATCAAATGTCCCAAAGGCGGCCTGGCAGC...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTCCAGCCAGGTGGGCTaGGTGCTGATGGCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSSSQVG*VLMAKE
Trigger: CTCCTTTGCCATCAGCACCAAGCCCACCTGGCTGGA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGAGTGGCTGCCGACCGGCCTCCCACAGCGTTGGCTCTTGGCCTGAGCCTTTGATGGCACCAGCACCTTaGATAGAACCTTCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GSGCRPASHSVGSWPEPLMAPAP*IEPSKL
Trigger: CAGCTTTGAAGGTTCTATCAAAGGTGCTGGTGCCAT...CAAAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCGGTCGGCAGCCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGTCCAAAAGCTCGGGTaGGGCTGGTTTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQVQKLG*GWFEAW
Trigger: CCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGAC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp GCAGCTCTAGCAGCTCCAGCAGCAAGTCCAGGTCCAGGATTCCGCTaGAGTTCTTGGGCCCCAGCAGCAGAGAGTCATACCTGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: AALAAPAASPGPGFR*SSWAPAAESHTCSW
Trigger: CCAGCTACAGGTATGACTCTCTGCTGCTGGGGCCCAAGAACTTCAGCGGAATCCTGGACCTGGACTTGCTGCTGGAGCTGCTAGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 90 bp TCCAGTCGACTTGGGAGGTCTGCCCCATCAGTGTCTGGTTGGCTGTaGGCAGCAGGAGCGTGCGGTTGTTCTGGAAATACTGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SSRLGRSAPSVSGWL*AAGACGCSGNTAGG
Trigger: GCCTCCTGCAGTATTTCCAGAACAACCGCACGCTCCTGCTGCTCACAGCCAACCAGACACTGATGGGGCAGACCTCCCAAGTCGACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp AGTCTTGGCAGGAGCAGGTCGCCACGTCGTCACCTTGGGACTCATTaGAACGTGCAACCCCCTCATTCAGAGGCTGAATCCCACTCCCCA +
Preference number: 5 (lower is better)
Translates to: SLGRSRSPRRHLGTH*NVQPPHSEAESHSP
Trigger: TGGGGAGTGGGATTCAGCCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACCTGCTCCTGCCAAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp GGAGCCGTCAGGATCACCTGGTTGGTTCGGAAGAAGGGGCCGAAATaGTGGTCATGGAAAGCTTTCTCACTCCGGGCTTGGCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAVRITWLVRKKGPK*WSWKAFSLRAWLLG
Trigger: CCCCAACAGCCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGACGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 90 bp CTTCCAGTGATACCAGCTGCTTGGCGGAGCAGCAGGCTTGGGTGTTaGGGCCGGTGTAGAGGCGGGGGCAGATCTTCTGTAATAGGATCA +
Preference number: 5 (lower is better)
Translates to: LPVIPAAWRSSRLGC*GRCRGGGRSSVIGS
Trigger: TGATCCTATTACAGAAGATCTGCCCCCGCCTCTACACCGGCCCCAACACCCAAGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 90 bp GCACGTGTTGTGGCAGTGCAGGTTCACAAAATTGTCAGAGCAGGCTaGGCAGCGGGTGAGGAGGGCCTTGGTGATCGACAGACTCGCTTC +
Preference number: 5 (lower is better)
Translates to: ARVVAVQVHKIVRAG*AAGEEGLGDRQTRF
Trigger: GAAGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCGCTGCCCAGCCTGCTCTGACAATTTTGTGAACCTGCACTGCCACAACACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 90 bp AGGATCACCTGGTTGGTTCGGAAGAAGGGGCCGAAATGCTGGTCATaGAAAGCTTTCTCACTCCGGGCTTGGCTGTTGGGGGCCGACCAC +
Preference number: 5 (lower is better)
Translates to: RITWLVRKKGPKCWS*KAFSLRAWLLGADH
Trigger: GTGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTTCCGAACCAACCAGGTGATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTTTGGGGCTGCACGTGTaGTGGCAGTGCAGGTTCACA +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSLGLHV*WQCRFT
Trigger: TGTGAACCTGCACTGCCACAACACGTGCAGCCCCAA...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTTTCTCACTCCGGGCTaGGCTGTTGGGGGCCGACCA +
Preference number: 5 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPFLTPG*AVGGRP
Trigger: TGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAAA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGATTCCGCTGAAGTTCTaGGGCCCCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQIPLKF*GPSSRE
Trigger: CTCTCTGCTGCTGGGGCCCAAGAACTTCAGCGGAAT...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTCCTGCAGGGAGATGTaGCGCTGTGCTTCGGGCGAC +
Preference number: 5 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRASCREM*RCASGD
Trigger: GTCGCCCGAAGCACAGCGCAACATCTCCCTGCAGGA...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAAGCAGGAGCGTGCGGTaGTTCTGGAAATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGSRSVR*FWKYCR
Trigger: CCTGCAGTATTTCCAGAACAACCGCACGCTCCTGCT...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGCCGCCTTTGGGACATTaGATGTTGGGCCGGTCGTTC +
Preference number: 5 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQPPLGH*MLGRSF
Trigger: GAACGACCGGCCCAACATCAAATGTCCCAAAGGCGG...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCACCGCCGAGACCAGGTaGATGAGGGACACAGCATTG +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGITAETR*MRDTAL
Trigger: CAATGCTGTGTCCCTCATCAACCTGGTCTCGGCGGT...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGGATCCCCATAACCCTTaGGTTCAGGGCCATAGAGCC +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWDPHNP*VQGHRA
Trigger: GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATC...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGCAAGGCCTAGGTGACTaGGAAACTGGGGACCCACTA +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWQGLGD*ETGDPL
Trigger: TAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTG...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp TGCGGGCCGGCGTGTTGGACAGGCAGGACACGTTGGAGAGTGTCATaGGGCTTCCAGACAGCTCTGGGTTCTTCCCACATTCGTCATAGA +
Preference number: 5 (lower is better)
Translates to: CGPACWTGRTRWRVS*GFQTALGSSHIRHR
Trigger: TCTATGACGAATGTGGGAAGAACCCAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 90 bp AGAGGCGGGGGCAGATCTTCTGTAATAGGATCAGGTGATCACCTGTaGTCTTGCGGGCCGGCGTGTTGGACAGGCAGGACACGTTGGAGA +
Preference number: 5 (lower is better)
Translates to: RGGGRSSVIGSGDHL*SCGPACWTGRTRWR
Trigger: TCTCCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAAGATCACAGGTGATCACCTGATCCTATTACAGAAGATCTGCCCCCGCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 90 bp TATCAGCCCCCACGGACAGCACCAGGAAAGGAACCACTTGCAGGATaGCCAGGGAGGAGCGGATACCCAAGTAGGAGAAGAAGCCCATGG +
Preference number: 5 (lower is better)
Translates to: YQPPRTAPGKEPLAG*PGRSGYPSRRRSPW
Trigger: CCATGGGCTTCTTCTCCTACTTGGGTATCCGCTCCTCCCTGGTCATCCTGCAAGTGGTTCCTTTCCTGGTGCTGTCCGTGGGGGCTGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 90 bp TTGGCACAGTACAGAAAATGGTCCTTCCAGTCGACTTGGGAGGTCTaGCCCATCAGTGTCTGGTTGGCTGTGAGCAGCAGGAGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: LAQYRKWSFQSTWEV*PISVWLAVSSRSVR
Trigger: CCGCACGCTCCTGCTGCTCACAGCCAACCAGACACTGATGGGGCAGACCTCCCAAGTCGACTGGAAGGACCATTTTCTGTACTGTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTTGCGGGCCGGCGTGTaGGACAGGCAGGACACGTTG +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVLRAGV*DRQDTL
Trigger: CAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGGCGGAGCAGCAGGCTaGGGTGTTGGGGCCGGTGTA +
Preference number: 5 (lower is better)
Translates to: KWAPRKVSECGTNMECVCGGAAG*GVGAGV
Trigger: TACACCGGCCCCAACACCCAAGCCTGCTGCTCCGCC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTAGCCAGCGCTGGGCATaGCAAAGGGCAGAGCCATAC +
Preference number: 5 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPSQRWA*QRAEPY
Trigger: GTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCT...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTTGGGGTCCACCATCTaGCTTTTGTCCCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPLGSTI*LLSLAG
Trigger: CCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCAA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CTCTGGGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAAAGGTGAGCGGGGCATaGGCACAGTACAGAAAATGG +
Preference number: 5 (lower is better)
Translates to: LWAISVVVKPPHLPAMVGKVSGA*AQYRKW
Trigger: CCATTTTCTGTACTGTGCCAATGCCCCGCTCACCTT...TCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCAGGGCTGTGCCATCCTaGAAGGTGAGCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRARAVPS*KVSGAL
Trigger: CAATGCCCCGCTCACCTTCAAGGATGGCACAGCCCT...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGCCATCTCTGTGGTGGTAAAGCCACCCCATCTCCCTGCCATGGTGGGAACCCATCAGCTGTGGTGCGATaGATCTCGTCTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GHLCGGKATPSPCHGGNPSAVVR*ISSSRE
Trigger: CTCTCTGGAAGACGAGATCAATCGCACCACAGCTGA...TGGGTTCCCACCATGGCAGGGAGATGGGGTGGCTTTACCACCACAGAGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTCAGCTGTGGTGCGATaGATCTCGTCTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWSAVVR*ISSSRE
Trigger: CTCTCTGGAAGACGAGATCAATCGCACCACAGCTGA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCGGCAGCTCCTGGGGCTaGACACAGCAGCAGACGTCC +
Preference number: 5 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFGSSWG*TQQQTS
Trigger: GGACGTCTGCTGCTGTGTCAAGCCCCAGGAGCTGCC...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp TCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTGACAGGCAGGTGAAGGAGAAGTTGTaGCAGCCTGCACTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SVVLPGYLKSRPSSSDRQVKEKL*QPALEQ
Trigger: CTGCTCCAGTGCAGGCTGCAACAACTTCTCCTTCAC...CTGCCTGTCACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTAGGATGCCAGGCAGGTaGGTCATGGCCACACCTGCA +
Preference number: 5 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPRMPGR*VMATPA
Trigger: TGCAGGTGTGGCCATGACCAACCTGCCTGGCATCCT...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGTTGTTGGGCAAGAAGTaGCTGATGGCACCAGCACCT +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWLLGKK*LMAPAP
Trigger: AGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAA...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGAACTGCCGCCCATTGTaGGGCAAGAAGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWNCRPL*GKKLLM
Trigger: CATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCCAGAACTGCCGCCCATaGTTGGGCAAGAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGIQNCRP*LGKKLL
Trigger: CAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTG...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTCGGGTTGGGCTGGTTaGAGGCCTGGGATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFSGWAG*RPGIQA
Trigger: GGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCGTCCAAAAGCTCGGGTaGGGCTGGTTTGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAVQKLG*GWFEAW
Trigger: CCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGAC...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 90 bp ATGTTGGGCCGGTCGTTCAGGAACCAGGGAAGATACTTATGGAACTaGTCCACCGAGGGCCTCACAGAGCCCATCGTGATGCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: MLGRSFRNQGRYLWN*STEGLTEPIVMLMQ
Trigger: CTGCATGAGCATCACGATGGGCTCTGTGAGGCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTGGTTCCTGAACGACCGGCCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp GGCGTGTGTCAAGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTaGTTCAGGGCCATAGAGCCTAGACAGGGCCTCTGGCTGTATCAG +
Preference number: 5 (lower is better)
Translates to: GVCQGAVTRKIPITL*FRAIEPRQGLWLYQ
Trigger: CTGATACAGCCAGAGGCCCTGTCTAGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCTTGACACACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTTGCGGGCCGGCGTGTaGGACAGGCAGGACACGTTG +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECLRAGV*DRQDTL
Trigger: CAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCGGGTGAGGAGGGCCTaGGTGATCGACAGACTCGCT +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDRVRRA*VIDRLA
Trigger: AGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGGATGCAGCACAGTCTaGGCAGGAGCAGGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVGCSTV*AGAGRH
Trigger: GTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGGAGCCATCAGTGGTGCTGCCTGGATACCTCAAGAGCAGGCCATCCTCCAGTAAGGTGAGCGGGGCATaGGCACAGTACAGAAAATGG +
Preference number: 5 (lower is better)
Translates to: EEPSVVLPGYLKSRPSSSKVSGA*AQYRKW
Trigger: CCATTTTCTGTACTGTGCCAATGCCCCGCTCACCTT...ACTGGAGGATGGCCTGCTCTTGAGGTATCCAGGCAGCACCACTGATGGCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GCTTCTGGAGAGCTGTCCAAAAGCTCGGGTTGGGCTGGTTTGAGGCCTGGGATCTCAGCTGTGGTGCGATaGATCTCGTCTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: ASGELSKSSGWAGLRPGISAVVR*ISSSRE
Trigger: CTCTCTGGAAGACGAGATCAATCGCACCACAGCTGA...GATCCCAGGCCTCAAACCAGCCCAACCCGAGCTTTTGGACAGCTCTCCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCGGCCTCCCACAGCGTaGGCTCTTGGCCTGAGCCTT +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRPPTA*ALGLSL
Trigger: AAGGCTCAGGCCAAGAGCCAACGCTGTGGGAGGCCG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTCGGGTTGGGCTGGTTaGAGGCCTGGGATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSGWAG*RPGIQA
Trigger: GGCCTGGATCCCAGGCCTCAAACCAGCCCAACCCGA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp CATTTGATGTTGGGCCGGTCGTTCAGGAACCAGGGAAGATACTTATaGAACTGCTCCACCGAGGGCCTCACAGAGCCCATCGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: HLMLGRSFRNQGRYL*NCSTEGLTEPIVML
Trigger: GAGCATCACGATGGGCTCTGTGAGGCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTGGTTCCTGAACGACCGGCCCAACATCAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 90 bp CCCATAACCCTTTGGTTCAGGGCCATAGAGCCTAGACAGGGCCTCTaGCTGTATCAGAACTGCCGCCCATTGTTGGGCAAGAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PITLWFRAIEPRQGL*LYQNCRPLLGKKLL
Trigger: CAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGGCTCTATGGCCCTGAACCAAAGGGTTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTCGGGTGAGGAGGGCCTaGGTGATCGACAGACTCGCT +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRVRRA*VIDRLA
Trigger: AGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCG...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGCCAGCGCTGGGCATaGCAAAGGGCAGAGCCATAC +
Preference number: 5 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFSQRWA*QRAEPY
Trigger: GTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACCGCCACGTCGTCACCTaGGGACTCATTGCAACGTGC +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDRHVVT*GLIATC
Trigger: GCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCG...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACTCCACCATCTTGCTTTaGTCCCTGGCGGGGGCCACA +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDSTILL*SLAGAT
Trigger: TGTGGCCCCCGCCAGGGACAAAAGCAAGATGGTGGA...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGTGGAGAAGCTGAGCTaGTCAGAGAGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDVEKLS*SERLVP
Trigger: GGGCACCAGCCTCTCTGACAAGCTCAGCTTCTCCAC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGTCAGGATCACCTGGTaGGTTCGGAAGAAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVVRITW*VRKKGP
Trigger: CGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGAC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGGGCTGTGCCATCCTaGAAGGTGAGCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVRAVPS*KVSGAL
Trigger: CAATGCCCCGCTCACCTTCAAGGATGGCACAGCCCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AGGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTGGGTGAAGGAGAAGTaGTTGCAGCCTGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: RGSHKEDPHNPLVQGHRAWVKEK*LQPALE
Trigger: CTCCAGTGCAGGCTGCAACAACTTCTCCTTCACCCA...GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTACAATGGAGAGCAGGTaGAGGAGGCCGGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECTMESR*RRPERR
Trigger: CCTGCGCTCCGGCCTCCTCAACCTGCTCTCCATTGT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACACAATGGAGAGCAGGTaGAGGAGGCCGGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNTMESR*RRPERR
Trigger: CCTGCGCTCCGGCCTCCTCAACCTGCTCTCCATTGT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTACAATGGAGAGCAGGTaGAGGAGGCCGGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: KWAPRKVSECGTNMECVCTMESR*RRPERR
Trigger: CCTGCGCTCCGGCCTCCTCAACCTGCTCTCCATTGT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGGATGCCAGGCAGGTaGGTCATGGCCACACCTGCA +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVRMPGR*VMATPA
Trigger: TGCAGGTGTGGCCATGACCAACCTGCCTGGCATCCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGAGGAGGCACTGCCCAAGGCCTAGGTGACTTGGAAACTGGGGACCCACTATGGATGGCACCAGCACCTTaGATAGAACCTTCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GGGTAQGLGDLETGDPLWMAPAP*IEPSKL
Trigger: CAGCTTTGAAGGTTCTATCAAAGGTGCTGGTGCCAT...CCATAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTGGGCAGTGCCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGAGCCAGCGCTGGGCATaGCAAAGGGCAGAGCCATAC +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKSQRWA*QRAEPY
Trigger: GTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCT...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTGTCTCCCTGGAAGTaGAGCCAGCGCTGGGCATTG +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECVSPWK*SQRWAL
Trigger: CAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACAC...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCACCATCTTGCTTTaGTCCCTGGCGGGGGCCACA +
Preference number: 5 (lower is better)
Translates to: KWAPRKVSECGTNMECVCSTILL*SLAGAT
Trigger: TGTGGCCCCCGCCAGGGACAAAAGCAAGATGGTGGA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGGTCAGGATCACCTGGTaGGTTCGGAAGAAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKVRITW*VRKKGP
Trigger: CGGCCCCTTCTTCCGAACCAACCAGGTGATCCTGAC...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACATTCCGCTGAAGTTCTaGGGCCCCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDIPLKF*GPSSRE
Trigger: CTCTCTGCTGCTGGGGCCCAAGAACTTCAGCGGAAT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGTCCTTCCAGTCGACTaGGGAGGTCTGCCCCATCAG +
Preference number: 5 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNVLPVD*GGLPHQ
Trigger: CTGATGGGGCAGACCTCCCAAGTCGACTGGAAGGAC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGGTCCTTCCAGTCGACTaGGGAGGTCTGCCCCATCAG +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKVLPVD*GGLPHQ
Trigger: CTGATGGGGCAGACCTCCCAAGTCGACTGGAAGGAC...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTAGGGCTGTGCCATCCTaGAAGGTGAGCGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: KWAPRKVSECGTNMECVCRAVPS*KVSGAL
Trigger: CAATGCCCCGCTCACCTTCAAGGATGGCACAGCCCT...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GGGGCAGTCACAAGGAAGATCCCCATAACCCTTTGGTTCAGGGCCATAGAGCCTTTGGGACATTTGATGTaGGGCCGGTCGTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GAVTRKIPITLWFRAIEPLGHLM*GRSFRN
Trigger: GTTCCTGAACGACCGGCCCAACATCAAATGTCCCAA...AGGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATCTTCCTTGTGACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGGCTGCCAGGCCGCCTTaGGGACATTTGATGTTGGGC +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKAARPP*GHLMLG
Trigger: GCCCAACATCAAATGTCCCAAAGGCGGCCTGGCAGC...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCAGGTCAGCAGTGATGTaGGCTGCCAGCTCTCGAGCT +
Preference number: 5 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFRSAVM*AASSRA
Trigger: AGCTCGAGAGCTGGCAGCCAACATCACTGCTGACCT...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTAGGATGCCAGGCAGGTaGGTCATGGCCACACCTGCA +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECRMPGR*VMATPA
Trigger: TGCAGGTGTGGCCATGACCAACCTGCCTGGCATCCT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp TCCAGCTGGAATAGCTGCCCAGGGCCAGAGAGATGTACAGGAATATaGCAATGTAGCTGGTGGCAAAGATGGGCAGGTCTTCAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SSWNSCPGPERCTGI*QCSWWQRWAGLQLW
Trigger: CCACAGCTGAAGACCTGCCCATCTTTGCCACCAGCTACATTGTCATATTCCTGTACATCTCTCTGGCCCTGGGCAGCTATTCCAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGCAGGCTGGTGGATGGTaGTGTAAGGCTCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKQAGGW*CKAHSG
Trigger: CCCAGAGTGAGCCTTACACAACCATCCACCAGCCTG...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACAGCAGGAGCGTGCGGTaGTTCTGGAAATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDSRSVR*FWKYCR
Trigger: CCTGCAGTATTTCCAGAACAACCGCACGCTCCTGCT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCAGCAGGAGCGTGCGGTaGTTCTGGAAATACTGCAGG +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVSRSVR*FWKYCR
Trigger: CCTGCAGTATTTCCAGAACAACCGCACGCTCCTGCT...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACGTGAAGGAGAAGTTGTaGCAGCCTGCACTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDVKEKL*QPALEQ
Trigger: CTGCTCCAGTGCAGGCTGCAACAACTTCTCCTTCAC...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTACCGCCGAGACCAGGTaGATGAGGGACACAGCATTG +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECTAETR*MRDTAL
Trigger: CAATGCTGTGTCCCTCATCAACCTGGTCTCGGCGGT...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCGATCCCCATAACCCTTaGGTTCAGGGCCATAGAGCC +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVDPHNP*VQGHRA
Trigger: GGCTCTATGGCCCTGAACCAAAGGGTTATGGGGATC...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCCAAGGCCTAGGTGACTaGGAAACTGGGGACCCACTA +
Preference number: 5 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFQGLGD*ETGDPL
Trigger: TAGTGGGTCCCCAGTTTCCAAGTCACCTAGGCCTTG...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp GGTAAGACTGCTCAGGGAACTCTGTGGCATACTGGATCTTCTGGGTaGAGGAGAAGTTGTTGCAGCCTGCACTGGAGCAGATGGCATTCA +
Preference number: 5 (lower is better)
Translates to: GKTAQGTLWHTGSSG*RRSCCSLHWSRWHS
Trigger: TGAATGCCATCTGCTCCAGTGCAGGCTGCAACAACTTCTCCTTCACCCAGAAGATCCAGTATGCCACAGAGTTCCCTGAGCAGTCTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTCACCTTGGGACTCATaGCAACGTGCAACCCCCTCA +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECSPWDS*QRATPS
Trigger: TGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCACCTTGGGACTCATaGCAACGTGCAACCCCCTCA +
Preference number: 5 (lower is better)
Translates to: KWAPRKVSECGTNMECVCSPWDS*QRATPS
Trigger: TGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGA...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTGGGTGAAGGAGAAGTaGTTGCAGCCTGCACTGGAG +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECWVKEK*LQPALE
Trigger: CTCCAGTGCAGGCTGCAACAACTTCTCCTTCACCCA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGGTCGAGGGGCAGAACTaGTCCTTATTGGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKVEGQN*SLLGPD
Trigger: ATCTGGCCCCAATAAGGACAAGTTCTGCCCCTCGAC...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACGTCGAGGGGCAGAACTaGTCCTTATTGGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNVEGQN*SLLGPD
Trigger: ATCTGGCCCCAATAAGGACAAGTTCTGCCCCTCGAC...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp AAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTGTCGAGGGGCAGAACTaGTCCTTATTGGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: KWAPRKVSECGTNMECVCVEGQN*SLLGPD
Trigger: ATCTGGCCCCAATAAGGACAAGTTCTGCCCCTCGAC...ACAGACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp CCTATGTGCACAGCACAGAGCCAGGATCTTCATCTCCACTGCAGTTCATGCTTCTTGGGACATTTGATGTaGGGCCGGTCGTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PMCTAQSQDLHLHCSSCFLGHLM*GRSFRN
Trigger: GTTCCTGAACGACCGGCCCAACATCAAATGTCCCAA...GAAGCATGAACTGCAGTGGAGATGAAGATCCTGGCTCTGTGCTGTGCACATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTTGTTGGGCAAGAAGTaGCTGATGGCACCAGCACCT +
Preference number: 5 (lower is better)
Translates to: EKWAPRKVSECGTNMECVLLGKK*LMAPAP
Trigger: AGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAA...GACACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GTGAGTGAGTGTGGGACAAACATGGAGTGTGTCTGTTCCTGCCAACTTCCAGACAACTGCCGCCCATTGTaGGGCAAGAAGTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: VSECGTNMECVCSCQLPDNCRPL*GKKLLM
Trigger: CATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTT...GTCTGGAAGTTGGCAGGAACAGACACACTCCATGTTTGTCCCACACTCACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 90 bp CTTCTGTGTAATCCTGTGAGTTTTTCAGGGGCTTGTGATAGGCCATaGACCTGGAGGTTGAATCCAGGAGGTAGAGGTTGCAGTGAGCCG +
Preference number: 5 (lower is better)
Translates to: LLCNPVSFSGACDRP*TWRLNPGGRGCSEP
Trigger: CGGCTCACTGCAACCTCTACCTCCTGGATTCAACCTCCAGGTTCATGGCCTATCACAAGCCCCTGAAAAACTCACAGGATTACACAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289547.8
CDS-3UTR CAA 90 bp ACCCAGGGTAGTGGTCATTGTCTGTGTTCTCAGGGACACTGCTACGTGTTAAAGTCAGCTGTGGTGCGATaGATCTCGTCTTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TQGSGHCLCSQGHCYVLKSAVVR*ISSSRE
Trigger: CTCTCTGGAAGACGAGATCAATCGCACCACAGCTGA...CTTTAACACGTAGCAGTGTCCCTGAGAACACAGACAATGACCACTACCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp GATGAGAAGTGGGCTCCTAGGAAAGTGAGTGAGTGTGGGACAAACATGGAGTGTTTGGGACATTTGATGTaGGGCCGGTCGTTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: DEKWAPRKVSECGTNMECLGHLM*GRSFRN
Trigger: GTTCCTGAACGACCGGCCCAACATCAAATGTCCCAA...ACACTCCATGTTTGTCCCACACTCACTCACTTTCCTAGGAGCCCACTTCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS-3UTR CAA 90 bp TTCTGTAGGAAATTGGAGAATACATGGCCTAAATATTACTCTCCTGGCACAATGTTGCGGGCCGGCGTGTaGGACAGGCAGGACACGTTG +
Preference number: 5 (lower is better)
Translates to: FCRKLENTWPKYYSPGTMLRAGV*DRQDTL
Trigger: CAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAA...CATTGTGCCAGGAGAGTAATATTTAGGCCATGTATTCTCCAATTTCCTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423141.1
CDS-3UTR CAA 90 bp GTGGCCTTGACTGGCAGCAACAGCCTTAATAAGTATTGGAGCTGGAGACCAAACATGGCACCAGCACCTTaGATAGAACCTTCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VALTGSNSLNKYWSWRPNMAPAP*IEPSKL
Trigger: CAGCTTTGAAGGTTCTATCAAAGGTGCTGGTGCCAT...GTTTGGTCTCCAGCTCCAATACTTATTAAGGCTGTTGCTGCCAGTCAAGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp CTCCCAGGACCACGGCCACCCCGCCGAGGCCCAGCGTaGCCTTGGAGTCCACCATCACTCGGCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPGPRPPRRGPA*PWSPPSLGSSW
Trigger: CCAGCTGGAGCCGAGTGATGGTGGACTCCAAGGCCACGCTGGGCCTCGGCGGGGTGGCCGTGGTCCTGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp GTCGAGGGCCTGGGGGCGGGCTATGGCAGGACAGGATaGAGCACAGTCTTGGCAGGAGCAGGTCGCCACGTC +
Preference number: 6 (lower is better)
Translates to: VEGLGAGYGRTG*STVLAGAGRHV
Trigger: GACGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCCTGTCCTGCCATAGCCCGCCCCCAGGCCCTCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp CACGCCACACATGGTGCCCACAGCCAGCGTGGCAGCTaGAGGGACGCGCACACGGCTGCAGGAGTCATAGCT +
Preference number: 6 (lower is better)
Translates to: HATHGAHSQRGS*RDAHTAAGVIA
Trigger: AGCTATGACTCCTGCAGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp ACCATGACTGCTGCCACCGCCTCCTCAGCCCGCTTCTaGTCCAGTGCCAGAGCCGGGTTAACGTCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: TMTAATASSARF*SSARAGLTSGP
Trigger: GGGGCCTGACGTTAACCCGGCTCTGGCACTGGAGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp AGCCATACACGCCACACATGGTGCCCACAGCCAGCGTaGCAGCTGCAGGGACGCGCACACGGCTGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: SHTRHTWCPQPA*QLQGRAHGCRS
Trigger: ACTCCTGCAGCCGTGTGCGCGTCCCTGCAGCTGCCACGCTGGCTGTGGGCACCATGTGTGGCGTGTATGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp GGAGGGGTGATTTGGGCAAGAGGCCACCATGACTGCTaGCACCGCCTCCTCAGCCCGCTTCTGCTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: GGVIWARGHHDC*HRLLSPLLLQC
Trigger: GCACTGGAGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 72 bp TCGGGAGGGGTGATTTGGGCAAGAGGCCACCATGACTaGTGCCACCGCCTCCTCAGCCCGCTTCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: SGGVIWARGHHD*CHRLLSPLLLQ
Trigger: CTGGAGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 72 bp CCGGGTCTGTTCCAGGCACTTTCCGCAGGTCAGCAGTaGTGTTGGCTGCCAGCTCTCGAGCTGCCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: PGLFQALSAGQQ*CWLPALELPAE
Trigger: CTCTGCGGGCAGCTCGAGAGCTGGCAGCCAACATCACTGCTGACCTGCGGAAAGTGCCTGGAACAGACCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 72 bp AGACTCGGGAGGGGTGATTTGGGCAAGAGGCCACCATaGCTGCTGCCACCGCCTCCTCAGCCCGCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: RLGRGDLGKRPP*LLPPPPQPASA
Trigger: AGCAGAAGCGGGCTGAGGAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 72 bp ATGTTGCGCTGTGCTTCGGGCGACCATACCTGGAGGTaGCGCAGCCTCTCCTGCAGCTCTAGCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: MLRCASGDHTWR*RSLSCSSSSSS
Trigger: GCTGGAGCTGCTAGAGCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGAAGCACAGCGCAACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp CAGAGAGGCTGCACAACAGCATGCTGGGAGCCACCCTaGCTAGGGCTCGCCCAATGTGGACCTCTCGTGGCT +
Preference number: 6 (lower is better)
Translates to: QRGCTTACWEPP*LGLAQCGPLVA
Trigger: AGCCACGAGAGGTCCACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCCTCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp AGGGAGATGTTGCGCTGTGCTTCGGGCGACCATACCTaGAGGTGCCGCAGCCTCTCCTGCAGCTCTAGCAGC +
Preference number: 6 (lower is better)
Translates to: REMLRCASGDHT*RCRSLSCSSSS
Trigger: GCTGCTAGAGCTGCAGGAGAGGCTGCGGCACCTCCAGGTATGGTCGCCCGAAGCACAGCGCAACATCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp AGCAGATGGCCTCAGAGAGGCTGCACAACAGCATGCTaGGAGCCACCCTGCCTAGGGCTCGCCCAATGTGGA +
Preference number: 6 (lower is better)
Translates to: SRWPQRGCTTAC*EPPCLGLAQCG
Trigger: TCCACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCATCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp CCTTGGCGAGGCCCAGGACAAGGATGCCAGGCAGGTTaGTCATGGCCACACCTGCAAACACCGCACTTCCCA +
Preference number: 6 (lower is better)
Translates to: PWRGPGQGCQAG*SWPHLQTPHFP
Trigger: TGGGAAGTGCGGTGTTTGCAGGTGTGGCCATGACCAACCTGCCTGGCATCCTTGTCCTGGGCCTCGCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp GTGATCGACAGACTCGCTTCCAGTGATACCAGCTGCTaGGCGGAGCAGCAGGCTTGGGTGTTGGGGCCGGTG +
Preference number: 6 (lower is better)
Translates to: VIDRLASSDTSC*AEQQAWVLGPV
Trigger: CACCGGCCCCAACACCCAAGCCTGCTGCTCCGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTGTCGATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 72 bp AGGCTGGTGCCCTTCTTGGGGTCCACCATCTTGCTTTaGTCCCTGGCGGGGGCCACACGGAATCCCACAAGC +
Preference number: 6 (lower is better)
Translates to: RLVPFLGSTILL*SLAGATRNPTS
Trigger: GCTTGTGGGATTCCGTGTGGCCCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp AGAAGCAGATGGCCTCAGAGAGGCTGCACAACAGCATaGTGGGAGCCACCCTGCCTAGGGCTCGCCCAATGT +
Preference number: 6 (lower is better)
Translates to: RSRWPQRGCTTA*WEPPCLGLAQC
Trigger: ACATTGGGCGAGCCCTAGGCAGGGTGGCTCCCAGCATGCTGTTGTGCAGCCTCTCTGAGGCCATCTGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp TCGTCTTCCAGAGAGCGCTCAGCCATGAACGTGACCTaGAACATGCCAGCCATCCGACGCTGGAAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SSSRERSAMNVT*NMPAIRRWKAR
Trigger: GCGAGCCTTCCAGCGTCGGATGGCTGGCATGTTCCAGGTCACGTTCATGGCTGAGCGCTCTCTGGAAGACGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp GATGTTGTCAGCTGTGGAGACTCGGGAGGGGTGATTTaGGCAAGAGGCCACCATGACTGCTGCCACCGCCTC +
Preference number: 6 (lower is better)
Translates to: DVVSCGDSGGVI*ARGHHDCCHRL
Trigger: GAGGCGGTGGCAGCAGTCATGGTGGCCTCTTGCCCAAATCACCCCTCCCGAGTCTCCACAGCTGACAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp ATCTTGCGGGCCGGCGTGTTGGACAGGCAGGACACGTaGGAGAGTGTCATGAGGCTTCCAGACAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ILRAGVLDRQDT*ESVMRLPDSSG
Trigger: CCCAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 72 bp ATGGTGGCCTCTTTGGCCCTCTCCAGCCAGGTGGGCTaGGTGCTGATGGCAAAGGAGCGGGTAATGTGGGAC +
Preference number: 6 (lower is better)
Translates to: MVASLALSSQVG*VLMAKERVMWD
Trigger: GTCCCACATTACCCGCTCCTTTGCCATCAGCACCAAGCCCACCTGGCTGGAGAGGGCCAAAGAGGCCACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 90 bp TCCCACATTCGTCATAGAAGGCGCAGTAGCCAGGCTGGTGGATGGTaGTGTAAGGCTCACTCTGGGCCAAGCGCAGGAGCAGGGCCCACA +
Preference number: 6 (lower is better)
Translates to: SHIRHRRRSSQAGGW*CKAHSGPSAGAGPT
Trigger: TGTGGGCCCTGCTCCTGCGCTTGGCCCAGAGTGAGCCTTACACAACCATCCACCAGCCTGGCTACTGCGCCTTCTATGACGAATGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp AGACCATTGCCTGTGTCTCCCTGGAAGTTGAGCCAGCGCTGGGCATaGCAAAGGGCAGAGCCATACACGCCACACATGGTGCCCACAGCC +
Preference number: 6 (lower is better)
Translates to: RPLPVSPWKLSQRWA*QRAEPYTPHMVPTA
Trigger: GGCTGTGGGCACCATGTGTGGCGTGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAATGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp CCAGGCTCCAAGAGGTGGAAGGTGATGTCCAGTGGGGCCAGACCATaGCCTGTGTCTCCCTGGAAGTTGAGCCAGCGCTGGGCATTGCAA +
Preference number: 6 (lower is better)
Translates to: PGSKRWKVMSSGARP*PVSPWKLSQRWALQ
Trigger: TTGCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCACTGGACATCACCTTCCACCTCTTGGAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp TTGTCAGAGAGGCTGGTGCCCTTCTTGGGGTCCACCATCTTGCTTTaGTCCCTGGCGGGGGCCACACGGAATCCCACAAGCAGGATGGTG +
Preference number: 6 (lower is better)
Translates to: LSERLVPFLGSTILL*SLAGATRNPTSRMV
Trigger: CACCATCCTGCTTGTGGGATTCCGTGTGGCCCCCGCCAGGGACAAAAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCTCTCTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp ATGAGCTGGGCCTTGGCGAGGCCCAGGACAAGGATGCCAGGCAGGTaGGTCATGGCCACACCTGCAAACACCGCACTTCCCATAGAGATG +
Preference number: 6 (lower is better)
Translates to: MSWALARPRTRMPGR*VMATPANTALPIEM
Trigger: CATCTCTATGGGAAGTGCGGTGTTTGCAGGTGTGGCCATGACCAACCTGCCTGGCATCCTTGTCCTGGGCCTCGCCAAGGCCCAGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 72 bp AGCTGGGCCACGCGGGTCACATTGATGAAGAGGCTCTaGTTGGGGCTGCACGTGTTGTGGCAGTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SWATRVTLMKRL*LGLHVLWQCRF
Trigger: GAACCTGCACTGCCACAACACGTGCAGCCCCAATCAGAGCCTCTTCATCAATGTGACCCGCGTGGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 72 bp GCAGCTCCAGCAGCAAGTCCAGGTCCAGGATTCCGCTaGAGTTCTTGGGCCCCAGCAGCAGAGAGTCATACC +
Preference number: 6 (lower is better)
Translates to: AAPAASPGPGFR*SSWAPAAESHT
Trigger: GGTATGACTCTCTGCTGCTGGGGCCCAAGAACTTCAGCGGAATCCTGGACCTGGACTTGCTGCTGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp GGTCGCCACGTCGTCACCTTGGGACTCATTGCAACGTaGAACCCCCTCATTCAGAGGCTGAATCCCACTCCC +
Preference number: 6 (lower is better)
Translates to: GRHVVTLGLIAT*NPLIQRLNPTP
Trigger: GGGAGTGGGATTCAGCCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp CCATTGCCTGTGTCTCCCTGGAAGTTGAGCCAGCGCTaGGCATTGCAAAGGGCAGAGCCATACACGCCACAC +
Preference number: 6 (lower is better)
Translates to: PLPVSPWKLSQR*ALQRAEPYTPH
Trigger: GTGTGGCGTGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp CTGGCCAGGCTCCAAGAGGTGGAAGGTGATGTCCAGTaGGGCCAGACCATTGCCTGTGTCTCCCTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: LARLQEVEGDVQ*GQTIACVSLEV
Trigger: AACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCACTGGACATCACCTTCCACCTCTTGGAGCCTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp GTGGGCTTGGTGCTGATGGCAAAGGAGCGGGTAATGTaGGACACAAACTCCACAGACATGCCCACCGCCGAG +
Preference number: 6 (lower is better)
Translates to: VGLVLMAKERVM*DTNSTDMPTAE
Trigger: CTCGGCGGTGGGCATGTCTGTGGAGTTTGTGTCCCACATTACCCGCTCCTTTGCCATCAGCACCAAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp CGTCATAGAAGGCGCAGTAGCCAGGCTGGTGGATGGTaGTGTAAGGCTCACTCTGGGCCAAGCGCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: RHRRRSSQAGGW*CKAHSGPSAGA
Trigger: TGCTCCTGCGCTTGGCCCAGAGTGAGCCTTACACAACCATCCACCAGCCTGGCTACTGCGCCTTCTATGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 72 bp CCTGTGTCTCCCTGGAAGTTGAGCCAGCGCTGGGCATaGCAAAGGGCAGAGCCATACACGCCACACATGGTG +
Preference number: 6 (lower is better)
Translates to: PVSPWKLSQRWA*QRAEPYTPHMV
Trigger: CACCATGTGTGGCGTGTATGGCTCTGCCCTTTGCAATGCCCAGCGCTGGCTCAACTTCCAGGGAGACACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 72 bp AAGAGGTGGAAGGTGATGTCCAGTGGGGCCAGACCATaGCCTGTGTCTCCCTGGAAGTTGAGCCAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: KRWKVMSSGARP*PVSPWKLSQRW
Trigger: CCAGCGCTGGCTCAACTTCCAGGGAGACACAGGCAATGGTCTGGCCCCACTGGACATCACCTTCCACCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 72 bp TCTGTTCCAGGCACTTTCCGCAGGTCAGCAGTGATGTaGGCTGCCAGCTCTCGAGCTGCCCGCAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SVPGTFRRSAVM*AASSRAARRAS
Trigger: AGAAGCTCTGCGGGCAGCTCGAGAGCTGGCAGCCAACATCACTGCTGACCTGCGGAAAGTGCCTGGAACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 90 bp TCACCTGTGATCTTGCGGGCCGGCGTGTTGGACAGGCAGGACACGTaGGAGAGTGTCATGAGGCTTCCAGACAGCTCTGGGTTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: SPVILRAGVLDRQDT*ESVMRLPDSSGFFP
Trigger: TGGGAAGAACCCAGAGCTGTCTGGAAGCCTCATGACACTCTCCAACGTGTCCTGCCTGTCCAACACGCCGGCCCGCAAGATCACAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp CCCTGGAAGAACTGGCCAAGGAGGGTGTGGGTGGAGAAGCTGAGCTaGTCAGAGAGGCTGGTGCCCTTCTTGGGGTCCACCATCTTGCTT +
Preference number: 6 (lower is better)
Translates to: PWKNWPRRVWVEKLS*SERLVPFLGSTILL
Trigger: AAGCAAGATGGTGGACCCCAAGAAGGGCACCAGCCTCTCTGACAAGCTCAGCTTCTCCACCCACACCCTCCTTGGCCAGTTCTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp CCGAAATGCTGGTCATGGAAAGCTTTCTCACTCCGGGCTTGGCTGTaGGGGGCCGACCACAGCTCCACGGGGTCCGTAGTGAGTTCTGTA +
Preference number: 6 (lower is better)
Translates to: PKCWSWKAFSLRAWL*GADHSSTGSVVSSV
Trigger: TACAGAACTCACTACGGACCCCGTGGAGCTGTGGTCGGCCCCCAACAGCCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp CCCATAGAGATGGTGGCCTCTTTGGCCCTCTCCAGCCAGGTGGGCTaGGTGCTGATGGCAAAGGAGCGGGTAATGTGGGACACAAACTCC +
Preference number: 6 (lower is better)
Translates to: PIEMVASLALSSQVG*VLMAKERVMWDTNS
Trigger: GGAGTTTGTGTCCCACATTACCCGCTCCTTTGCCATCAGCACCAAGCCCACCTGGCTGGAGAGGGCCAAAGAGGCCACCATCTCTATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 90 bp TTCACAAAATTGTCAGAGCAGGCTGGGCAGCGGGTGAGGAGGGCCTaGGTGATCGACAGACTCGCTTCCAGTGATACCAGCTGCTTGGCG +
Preference number: 6 (lower is better)
Translates to: FTKLSEQAGQRVRRA*VIDRLASSDTSCLA
Trigger: CGCCAAGCAGCTGGTATCACTGGAAGCGAGTCTGTCGATCACCAAGGCCCTCCTCACCCGCTGCCCAGCCTGCTCTGACAATTTTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp GGATGCAGCACAGTCTTGGCAGGAGCAGGTCGCCACGTCGTCACCTaGGGACTCATTGCAACGTGCAACCCCCTCATTCAGAGGCTGAAT +
Preference number: 6 (lower is better)
Translates to: GCSTVLAGAGRHVVT*GLIATCNPLIQRLN
Trigger: ATTCAGCCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACCTGCTCCTGCCAAGACTGTGCTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp TGGTCCTTCCAGTCGACTTGGGAGGTCTGCCCCATCAGTGTCTGGTaGGCTGTGAGCAGCAGGAGCGTGCGGTTGTTCTGGAAATACTGC +
Preference number: 6 (lower is better)
Translates to: WSFQSTWEVCPISVW*AVSSRSVRLFWKYC
Trigger: GCAGTATTTCCAGAACAACCGCACGCTCCTGCTGCTCACAGCCAACCAGACACTGATGGGGCAGACCTCCCAAGTCGACTGGAAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp AGGAGCAGGTCGCCACGTCGTCACCTTGGGACTCATTaGAACGTGCAACCCCCTCATTCAGAGGCTGAATCC +
Preference number: 6 (lower is better)
Translates to: RSRSPRRHLGTH*NVQPPHSEAES
Trigger: GGATTCAGCCTCTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACCTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp CAGTCTTGGCAGGAGCAGGTCGCCACGTCGTCACCTTaGGACTCATTGCAACGTGCAACCCCCTCATTCAGA +
Preference number: 6 (lower is better)
Translates to: QSWQEQVATSSP*DSLQRATPSFR
Trigger: TCTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACCTGCTCCTGCCAAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp TTGGGCCGGTCGTTCAGGAACCAGGGAAGATACTTATaGAACTGCTCCACCGAGGGCCTCACAGAGCCCATC +
Preference number: 6 (lower is better)
Translates to: LGRSFRNQGRYL*NCSTEGLTEPI
Trigger: GATGGGCTCTGTGAGGCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTGGTTCCTGAACGACCGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp ACAGTCTTGGCAGGAGCAGGTCGCCACGTCGTCACCTaGGGACTCATTGCAACGTGCAACCCCCTCATTCAG +
Preference number: 6 (lower is better)
Translates to: TVLAGAGRHVVT*GLIATCNPLIQ
Trigger: CTGAATGAGGGGGTTGCACGTTGCAATGAGTCCCAAGGTGACGACGTGGCGACCTGCTCCTGCCAAGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 72 bp CCACGGACAGCACCAGGAAAGGAACCACTTGCAGGATaGCCAGGGAGGAGCGGATACCCAAGTAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: PRTAPGKEPLAG*PGRSGYPSRRR
Trigger: TCTTCTCCTACTTGGGTATCCGCTCCTCCCTGGTCATCCTGCAAGTGGTTCCTTTCCTGGTGCTGTCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 72 bp AGGTGCTGTATGCTGCCAGGCCGCCTTTGGGACATTTaGTGTTGGGCCGGTCGTTCAGGAACCAGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: RCCMLPGRLWDI*CWAGRSGTRED
Trigger: ATCTTCCCTGGTTCCTGAACGACCGGCCCAACATCAAATGTCCCAAAGGCGGCCTGGCAGCATACAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 72 bp CGGTCGTTCAGGAACCAGGGAAGATACTTATGGAACTaGTCCACCGAGGGCCTCACAGAGCCCATCGTGATG +
Preference number: 6 (lower is better)
Translates to: RSFRNQGRYLWN*STEGLTEPIVM
Trigger: CATCACGATGGGCTCTGTGAGGCCCTCGGTGGAGCAGTTCCATAAGTATCTTCCCTGGTTCCTGAACGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp ATTCGTCATAGAAGGCGCAGTAGCCAGGCTGGTGGATaGTTGTGTAAGGCTCACTCTGGGCCAAGCGCAGGA +
Preference number: 6 (lower is better)
Translates to: IRHRRRSSQAGG*LCKAHSGPSAG
Trigger: TCCTGCGCTTGGCCCAGAGTGAGCCTTACACAACCATCCACCAGCCTGGCTACTGCGCCTTCTATGACGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp TGGTTGGTTCGGAAGAAGGGGCCGAAATGCTGGTCATaGAAAGCTTTCTCACTCCGGGCTTGGCTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: WLVRKKGPKCWS*KAFSLRAWLLG
Trigger: CCCCAACAGCCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTTCCGAACCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CCA 72 bp CTTTGGTTCAGGGCCATAGAGCCTAGACAGGGCCTCTaGCTGTATCAGAACTGCCGCCCATTGTTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: LWFRAIEPRQGL*LYQNCRPLLGK
Trigger: CTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGGCTCTATGGCCCTGAACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp CAGGGCCTCTGGCTGTATCAGAACTGCCGCCCATTGTaGGGCAAGAAGTTGCTGATGGCACCAGCACCTTTG +
Preference number: 6 (lower is better)
Translates to: QGLWLYQNCRPL*GKKLLMAPAPL
Trigger: CAAAGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp AGACAGGGCCTCTGGCTGTATCAGAACTGCCGCCCATaGTTGGGCAAGAAGTTGCTGATGGCACCAGCACCT +
Preference number: 6 (lower is better)
Translates to: RQGLWLYQNCRP*LGKKLLMAPAP
Trigger: AGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCCCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 72 bp GGCAGATCTTCTGTAATAGGATCAGGTGATCACCTGTaGTCTTGCGGGCCGGCGTGTTGGACAGGCAGGACA +
Preference number: 6 (lower is better)
Translates to: GRSSVIGSGDHL*SCGPACWTGRT
Trigger: TGTCCTGCCTGTCCAACACGCCGGCCCGCAAGATCACAGGTGATCACCTGATCCTATTACAGAAGATCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS TCA 72 bp ACAGGGCGAGAAACAGCAGCAGCACAACACCTCGAGTaGTCCAGTGCAGCAGGAAGGGGGCATAAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: TGRETAAAQHLE*SSAAGRGHKPF
Trigger: AAAAGGCTTATGCCCCCTTCCTGCTGCACTGGATCACTCGAGGTGTTGTGCTGCTGCTGTTTCTCGCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289547.8
ENST00000381160.8
CDS TCA 72 bp GGAACTGCTCCACCGAGGGCCTCACAGAGCCCATCGTaGTGCTCATGCAGTTCTTTAGGCAGTTCAGAGAGT +
Preference number: 6 (lower is better)
Translates to: GTAPPRASQSPS*CSCSSLGSSES
Trigger: ACTCTCTGAACTGCCTAAAGAACTGCATGAGCATCACGATGGGCTCTGTGAGGCCCTCGGTGGAGCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS GCA 72 bp AGGATCACCTGGTTGGTTCGGAAGAAGGGGCCGAAATaGTGGTCATGGAAAGCTTTCTCACTCCGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: RITWLVRKKGPK*WSWKAFSLRAW
Trigger: CCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTTCCGAACCAACCAGGTGATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS GCA 72 bp CTGGATCTTCTGGGTGAAGGAGAAGTTGTTGCAGCCTaGACTGGAGCAGATGGCATTCATCCCAGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: LDLLGEGEVVAA*TGADGIHPSLA
Trigger: AGCGAGGCTGGGATGAATGCCATCTGCTCCAGTGCAGGCTGCAACAACTTCTCCTTCACCCAGAAGATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CCA 72 bp ATCACCTGGTTGGTTCGGAAGAAGGGGCCGAAATGCTaGTCATGGAAAGCTTTCTCACTCCGGGCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ITWLVRKKGPKC*SWKAFSLRAWL
Trigger: CAGCCAAGCCCGGAGTGAGAAAGCTTTCCATGACCAGCATTTCGGCCCCTTCTTCCGAACCAACCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 72 bp GTGGCAAAGATGGGCAGGTCTTCAGCTGTGGTGCGATaGATCTCGTCTTCCAGAGAGCGCTCAGCCATGAAC +
Preference number: 6 (lower is better)
Translates to: VAKMGRSSAVVR*ISSSRERSAMN
Trigger: GTTCATGGCTGAGCGCTCTCTGGAAGACGAGATCAATCGCACCACAGCTGAAGACCTGCCCATCTTTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp GAGCCTAGACAGGGCCTCTGGCTGTATCAGAACTGCCGCCCATTGTaGGGCAAGAAGTTGCTGATGGCACCAGCACCTTTGATAGAACCT +
Preference number: 6 (lower is better)
Translates to: EPRQGLWLYQNCRPL*GKKLLMAPAPLIEP
Trigger: AGGTTCTATCAAAGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 72 bp CTGTATGCTGCCAGGCCGCCTTTGGGACATTTGATGTaGGGCCGGTCGTTCAGGAACCAGGGAAGATACTTA +
Preference number: 6 (lower is better)
Translates to: LYAARPPLGHLM*GRSFRNQGRYL
Trigger: TAAGTATCTTCCCTGGTTCCTGAACGACCGGCCCAACATCAAATGTCCCAAAGGCGGCCTGGCAGCATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS CAA 90 bp GGCCTCTGGCTGTATCAGAACTGCCGCCCATTGTTGGGCAAGAAGTaGCTGATGGCACCAGCACCTTTGATAGAACCTTCAAAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GLWLYQNCRPLLGKK*LMAPAPLIEPSKLW
Trigger: CCACAGCTTTGAAGGTTCTATCAAAGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 72 bp GCGTGCGGTTGTTCTGGAAATACTGCAGGAGGCTGTTaGTGCAGCAGTCGTAGAGACTGGTATTGTCCGGAT +
Preference number: 6 (lower is better)
Translates to: ACGCSGNTAGGC*CSSRRDWYCPD
Trigger: ATCCGGACAATACCAGTCTCTACGACTGCTGCATCAACAGCCTCCTGCAGTATTTCCAGAACAACCGCACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000423141.1
ENST00000546276.5
CDS CAA 90 bp ATAGAGCCTAGACAGGGCCTCTGGCTGTATCAGAACTGCCGCCCATaGTTGGGCAAGAAGTTGCTGATGGCACCAGCACCTTTGATAGAA +
Preference number: 6 (lower is better)
Translates to: IEPRQGLWLYQNCRP*LGKKLLMAPAPLIE
Trigger: TTCTATCAAAGGTGCTGGTGCCATCAGCAACTTCTTGCCCAACAATGGGCGGCAGTTCTGATACAGCCAGAGGCCCTGTCTAGGCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289547.8
ENST00000381160.8
ENST00000546276.5
CDS TCA 72 bp AATCCTGTGAGTTTTTCAGGGGCTTGTGATAGGCCATaGACCTGGAGGTTGAATCCAGGAGGTAGAGGTTGC +
Preference number: 6 (lower is better)
Translates to: NPVSFSGACDRP*TWRLNPGGRGC
Trigger: GCAACCTCTACCTCCTGGATTCAACCTCCAGGTTCATGGCCTATCACAAGCCCCTGAAAAACTCACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000289547.8