RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000255346

Ensembl transcript IDs: ENST00000260364.9, ENST00000388866.8, ENST00000448182.7, ENST00000455873.7, ENST00000525143.5, ENST00000525163.5, ENST00000527315.5, ENST00000529367.1, ENST00000530406.6

Found 1026 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTaGAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTGGCCAGGAGG +
Preference number: 1 (lower is better)
Translates to: WNTLLQSGRPGWVRV*SPVMESFFSLLARR
Trigger: CCTCCTGGCCAACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CCA 90 bp CCAACACCAGGTCTCCTGGCCTTGCTGACTCCCAGTCCAGGGAGATaGAGGCTTGGTGCAAGCACGAGCCCCGCTTTCCACCCACCCAAA +
Preference number: 1 (lower is better)
Translates to: PTPGLLALLTPSPGR*RLGASTSPAFHPPK
Trigger: TTTGGGTGGGTGGAAAGCGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCTGGACTGGGAGTCAGCAAGGCCAGGAGACCTGGTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GCAGCCACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTaGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTCCTTG +
Preference number: 1 (lower is better)
Translates to: AATFWNTLLQSGRPG*VRVCSPVMESFFSL
Trigger: CAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 90 bp AACAGACATGGGGAAGCTTCCAGGGCCACACAGCCAGAGTGTGGCTaGGCTGAGCTTCCAGGCTTAGCCCGCTTCATCCCCAGGCACTTG +
Preference number: 1 (lower is better)
Translates to: NRHGEASRATQPECG*AELPGLARFIPRHL
Trigger: CAAGTGCCTGGGGATGAAGCGGGCTAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTGTGTGGCCCTGGAAGCTTCCCCATGTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GCCCTGGGAGGAACCGACATCTGGTCTACACTCTGTGCTAGGCTTTaGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGGG +
Preference number: 1 (lower is better)
Translates to: ALGGTDIWSTLCARL*VPMSGLGEFAASWG
Trigger: CCCCCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACAGAGTGTAGACCAGATGTCGGTTCCTCCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp GCTCGTCCAGGAGGGCCCTGCCTGATTGGTCATTTCAGGAATGCCTaGTGTCTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCAC +
Preference number: 1 (lower is better)
Translates to: ARPGGPCLIGHFRNA*CLRQRCPHRTVQWH
Trigger: GTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp TGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCATTTCAGGAATaGCTGCTGTCTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATG +
Preference number: 1 (lower is better)
Translates to: CRSSRRALPDWSFQE*LLSPSALSSQNSAM
Trigger: CATTGCACTGTTCTGTGAGGACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp AATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTaGTCATTTCAGGAATGCCTGCTGTCTCCGTCAGCGCTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: NSLHLCRSSRRALPD*SFQECLLSPSALSS
Trigger: TGAGGACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp CATGATACTCTGCAGAATGGAAGCAAAGGGGGTGATGCCGATGCCTaGCCCGATGAGCACGGCATGCTCAGAGGCAAAGATCCTGCGGGT +
Preference number: 1 (lower is better)
Translates to: HDTLQNGSKGGDADA*PDEHGMLRGKDPAG
Trigger: ACCCGCAGGATCTTTGCCTCTGAGCATGCCGTGCTCATCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCATTCTGCAGAGTATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 90 bp GCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGGGCAAAGGACTaGGGGCAGGGCTCAAATGTGTTAAGGCGGTGTAGACAGAGATGG +
Preference number: 1 (lower is better)
Translates to: AGGSLVEICYERAKD*GQGSNVLRRCRQRW
Trigger: CCATCTCTGTCTACACCGCCTTAACACATTTGAGCCCTGCCCTCAGTCCTTTGCCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp AGTGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTaGCTGATTGGTCATTTCAGGAATGCCTGCTGTCTCCGTCAGCGC +
Preference number: 1 (lower is better)
Translates to: SVLIACTCAARPGGP*LIGHFRNACCLRQR
Trigger: GCGCTGACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp CCTCCCACGAATGCCCCAGCTCAGTGTATTAATAGCCTGCACTTGTaGCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCATTTCAGGAA +
Preference number: 1 (lower is better)
Translates to: PPTNAPAQCINSLHL*RSSRRALPDWSFQE
Trigger: TTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACACTGAGCTGGGGCATTCGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTaGACCTGTGAACTCTCCCCAAGCCAGGCCTGTTCAGTTCAACTT +
Preference number: 1 (lower is better)
Translates to: GPAAFDDMSTEADRT*TCELSPSQACSVQL
Trigger: AAGTTGAACTGAACAGGCCTGGCTTGGGGAGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 90 bp GAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTAAAACTCCAGGTGTaGGTTTCCCTGGTGAGTTGTGTGCCTCCCCAGGCTTGCTGGAAA +
Preference number: 1 (lower is better)
Translates to: EVPRVCGLRLVKLQV*VSLVSCVPPQACWK
Trigger: TTTCCAGCAAGCCTGGGGAGGCACACAACTCACCAGGGAAACTCACACCTGGAGTTTTACCAGCCTGAGGCCACACACTCTTGGAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp TCAGGAATGCCTGCTGTCTCCGTCAGCGCTGTCCTCACAGAACAGTaGAATGGCACCTGGCAAAGTGGTTCAGTGGGCTTGTGTTTGTGC +
Preference number: 1 (lower is better)
Translates to: SGMPAVSVSAVLTEQ*NGTWQSGSVGLCLC
Trigger: GCACAAACACAAGCCCACTGAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAGACAGCAGGCATTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp GGAGGTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTaGCCAGTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGC +
Preference number: 1 (lower is better)
Translates to: GGQGPSAGQWPSCHS*PVQMSCTYAAPGSG
Trigger: GCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 90 bp GGTCATCTGAGGCTGGTCCCTGTGGGGGCATTTATACTAATGCAATaGAGCAGACCCATGGTGTGGACTTGGGGCAGAGCTTGGAGAGGT +
Preference number: 1 (lower is better)
Translates to: GHLRLVPVGAFILMQ*SRPMVWTWGRAWRG
Trigger: ACCTCTCCAAGCTCTGCCCCAAGTCCACACCATGGGTCTGCTTCATTGCATTAGTATAAATGCCCCCACAGGGACCAGCCTCAGATGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 90 bp GGGGAGCTTTGGAACAGGGCGTTGTCTTCCCAGCCCCTTTCCCTTTaGTTAACTGCCACTCACGGACCAGTCTCACTTCCTGGGAAACAA +
Preference number: 1 (lower is better)
Translates to: GELWNRALSSQPLSL*LTATHGPVSLPGKQ
Trigger: TTGTTTCCCAGGAAGTGAGACTGGTCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGGGAAGACAACGCCCTGTTCCAAAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp ATCCGTGATTCTGCAGCGCCCTCTCGTGGGCAACTGGAATCTGTCTaGAGAGAAAACCTCAGGACACGGGCATATGGTCGTCACACATGT +
Preference number: 1 (lower is better)
Translates to: IRDSAAPSRGQLESV*RENLRTRAYGRHTC
Trigger: ACATGTGTGACGACCATATGCCCGTGTCCTGAGGTTTTCTCTCCAGACAGATTCCAGTTGCCCACGAGAGGGCGCTGCAGAATCACGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GCTGTCTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTaGCAAAGTGGTTCAGTGGGCTTGTGTTTGTGCTTTTGTTCCCCA +
Preference number: 1 (lower is better)
Translates to: AVSVSAVLTEQCNGT*QSGSVGLCLCFCSP
Trigger: TGGGGAACAAAAGCACAAACACAAGCCCACTGAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 90 bp TGGGGAAGGGTGCTTTACACTGTCAAGAAGAGAACCTATCAGGACTaGCTGCAAGGTGGAGGATGCCCAGGAAATGTGGGGCTCACAGGA +
Preference number: 1 (lower is better)
Translates to: WGRVLYTVKKRTYQD*LQGGGCPGNVGLTG
Trigger: TCCTGTGAGCCCCACATTTCCTGGGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAAGCACCCTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp GAAGGGTGCTTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTaGAAGGTGGAGGATGCCCAGGAAATGTGGGGCTCACAGGAGCTC +
Preference number: 1 (lower is better)
Translates to: EGCFTLSRREPIRTD*KVEDAQEMWGSQEL
Trigger: GAGCTCCTGTGAGCCCCACATTTCCTGGGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAAGCACCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp CCCGTTCCTCCTCACATCTTAAAGATGACATCCTCACTCCCATCCTaGTCTGTCCCAGTCCTCAGGGTATGTTTTGCCTTCCCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: PVPPHILKMTSSLPS*SVPVLRVCFAFPFP
Trigger: TGGGAAGGGGAAGGCAAAACATACCCTGAGGACTGGGACAGAGCAGGATGGGAGTGAGGATGTCATCTTTAAGATGTGAGGAGGAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp GCCCATCTGCACATCTGGGAAACATCCAGATGGTCAGACCATGCGTaGTGTACACTCACATGTGTGGTCCTGCTGCCTTCGATGACATGT +
Preference number: 1 (lower is better)
Translates to: AHLHIWETSRWSDHA*CTLTCVVLLPSMTC
Trigger: ACATGTCATCGAAGGCAGCAGGACCACACATGTGAGTGTACAGCACGCATGGTCTGACCATCTGGATGTTTCCCAGATGTGCAGATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp AAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTaGAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGTATTG +
Preference number: 1 (lower is better)
Translates to: KGHLQANGLHVILAQ*RCHVHMQLQEAAVL
Trigger: CAATACGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CCA 90 bp CTTCCAAATGACTGTGATGATTGGGCAGGTTTGGGACCATGGATGTaGGGGAAGGCTCCGTCGGAAAATGTTTGGAGGAGTGGTTGCCCT +
Preference number: 1 (lower is better)
Translates to: LPNDCDDWAGLGPWM*GKAPSENVWRSGCP
Trigger: AGGGCAACCACTCCTCCAAACATTTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CCTTTCCCTTTGATTAACTGCCACTCACGGACCAGTCTCACTTCCTaGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCT +
Preference number: 1 (lower is better)
Translates to: PFPLINCHSRTSLTS*ETNPLEIRDSAAPS
Trigger: AGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGTCCGTGAGTGGCAGTTAATCAAAGGGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp TTGATGGCCGATGATGCCCATCTGCACATCTGGGAAACATCCAGATaGTCAGACCATGCGTGCTGTACACTCACATGTGTGGTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: LMADDAHLHIWETSR*SDHACCTLTCVVLL
Trigger: CAGCAGGACCACACATGTGAGTGTACAGCACGCATGGTCTGACCATCTGGATGTTTCCCAGATGTGCAGATGGGCATCATCGGCCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp AATGCCTGCTGTCTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATaGCACCTGGCAAAGTGGTTCAGTGGGCTTGTGTTTGTGCTTTTG +
Preference number: 1 (lower is better)
Translates to: NACCLRQRCPHRTVQ*HLAKWFSGLVFVLL
Trigger: CAAAAGCACAAACACAAGCCCACTGAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAGACAGCAGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp GAAAGTGCCTGGTTCCAACCCCATGATGGCAGCCTTGGGGAAGGGTaGTTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAG +
Preference number: 1 (lower is better)
Translates to: ESAWFQPHDGSLGEG*FTLSRREPIRTDCK
Trigger: CTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCTGCCATCATGGGGTTGGAACCAGGCACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp TCAGGAAGGCTGGTTAATATGAGTATTTGTTTAGCACAGACAGTGTaGCCTGAGGCATCTCAACTCCCAGGCTGGGCTGGTGCTGGGCTT +
Preference number: 1 (lower is better)
Translates to: SGRLVNMSICLAQTV*PEASQLPGWAGAGL
Trigger: AAGCCCAGCACCAGCCCAGCCTGGGAGTTGAGATGCCTCAGGGCACACTGTCTGTGCTAAACAAATACTCATATTAACCAGCCTTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCCATaGAAAAGAAAGGTGCCAGCTACAATCCCATTGGAAAGTGCCTGG +
Preference number: 1 (lower is better)
Translates to: PASLPPPLQPWTSNP*KRKVPATIPLESAW
Trigger: CCAGGCACTTTCCAATGGGATTGTAGCTGGCACCTTTCTTTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CCTAAACGAACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTaGAAATCTGTTACGAGAGGGCAAAGGACTGAGGGCAGGGCTCAA +
Preference number: 1 (lower is better)
Translates to: PKRTADYLYMRVGAW*KSVTRGQRTEGRAQ
Trigger: TTGAGCCCTGCCCTCAGTCCTTTGCCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGTTCGTTTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp AGTCCTAAACGAACAGCTGACTATTTGTATATGCGGGTGGGAGCCTaGTGGAAATCTGTTACGAGAGGGCAAAGGACTGAGGGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: SPKRTADYLYMRVGA*WKSVTRGQRTEGRA
Trigger: AGCCCTGCCCTCAGTCCTTTGCCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGTTCGTTTAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp GGCAGGGCCAGTGGGGAAGGAAATGTGCTTGAGAAGCATTTAGAATaGCATGTTGACAGGCTTGATGATTGGCTGAAGGAGGAAGATGGG +
Preference number: 1 (lower is better)
Translates to: GRASGEGNVLEKHLE*HVDRLDDWLKEEDG
Trigger: CCCATCTTCCTCCTTCAGCCAATCATCAAGCCTGTCAACATGGCATTCTAAATGCTTCTCAAGCACATTTCCTTCCCCACTGGCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 90 bp ACCTTATGGAGCTTCATGTTGTCTTGGACACCTTCGATCCAGGAGTaGTGGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTGCCTGTAC +
Preference number: 1 (lower is better)
Translates to: TLWSFMLSWTPSIQE*WQLGQVCFLFWCLY
Trigger: GTACAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CCA 90 bp GCCGGAGAAATAAGCTTCCAAATGACTGTGATGATTGGGCAGGTTTaGGACCATGGATGTGGGGGAAGGCTCCGTCGGAAAATGTTTGGA +
Preference number: 1 (lower is better)
Translates to: AGEISFQMTVMIGQV*DHGCGGRLRRKMFG
Trigger: TCCAAACATTTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTATTTCTCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp TCTTCTCCTTGTTGGCCAGGAGGTCAAGGGCCATCTGCAGGCCAATaGCCTTCATGTCATTCTTGCCCAGTGCAGATGTCATGTACATAT +
Preference number: 1 (lower is better)
Translates to: SSPCWPGGQGPSAGQ*PSCHSCPVQMSCTY
Trigger: ATATGTACATGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCTGGCCAACAAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 90 bp TCTGGTTCCCTCACTTTCACAGAAACCCCAGAATCTACAGCAGACTaGACAAGGCACTGTCCCTTCCCCTGGGTTCTAGAGGAAGTTCAT +
Preference number: 1 (lower is better)
Translates to: SGSLTFTETPESTAD*TRHCPFPWVLEEVH
Trigger: ATGAACTTCCTCTAGAACCCAGGGGAAGGGACAGTGCCTTGTTCAGTCTGCTGTAGATTCTGGGGTTTCTGTGAAAGTGAGGGAACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 90 bp AAGAGAAATGATGTAGATGCACGAAAGCCTGGAGCAGCAAGGAGCTaGACTGAGGTGGAATGTCTTGAGCACTTGGCGTCTCATGTCACC +
Preference number: 1 (lower is better)
Translates to: KRNDVDARKPGAARS*TEVECLEHLASHVT
Trigger: GGTGACATGAGACGCCAAGTGCTCAAGACATTCCACCTCAGTTCAGCTCCTTGCTGCTCCAGGCTTTCGTGCATCTACATCATTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp AATAAGCTTCCAAATGACTGTGATGATTGGGCAGGTTTGGGACCATaGATGTGGGGGAAGGCTCCGTCGGAAAATGTTTGGAGGAGTGGT +
Preference number: 1 (lower is better)
Translates to: NKLPNDCDDWAGLGP*MWGKAPSENVWRSG
Trigger: ACCACTCCTCCAAACATTTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CATCCAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATaGACTTCCAACCCATGGAAAAGAAAGGTGCCAGCTACAATCCCA +
Preference number: 1 (lower is better)
Translates to: HPGYDPASLPPPLQP*TSNPWKRKVPATIP
Trigger: TGGGATTGTAGCTGGCACCTTTCTTTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CTGGAGAGAAAACCTCAGGACACGGGCATATGGTCGTCACACATGTaGGCATTCACGGATTTTAGAATCGTATGTCCAAGTCCTTCCACC +
Preference number: 1 (lower is better)
Translates to: LERKPQDTGIWSSHM*AFTDFRIVCPSPST
Trigger: GGTGGAAGGACTTGGACATACGATTCTAAAATCCGTGAATGCCCACATGTGTGACGACCATATGCCCGTGTCCTGAGGTTTTCTCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTaGTTCAGTGGGCTTGTGTTTGTGCTTTTGTTCCCCAAATTACAA +
Preference number: 1 (lower is better)
Translates to: RQRCPHRTVQWHLAK*FSGLVFVLLFPKLQ
Trigger: TTGTAATTTGGGGAACAAAAGCACAAACACAAGCCCACTGAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GTGCTTGAGAAGCATTTAGAATGCCATGTTGACAGGCTTGATGATTaGCTGAAGGAGGAAGATGGGGGAGATAGAGGAGCCAAGGGTACC +
Preference number: 1 (lower is better)
Translates to: VLEKHLECHVDRLDD*LKEEDGGDRGAKGT
Trigger: GGTACCCTTGGCTCCTCTATCTCCCCCATCTTCCTCCTTCAGCCAATCATCAAGCCTGTCAACATGGCATTCTAAATGCTTCTCAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp TTATGGAGCTTCATGTTGTCTTGGACACCTTCGATCCAGGAGTGCTaGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTGCCTGTACATG +
Preference number: 1 (lower is better)
Translates to: LWSFMLSWTPSIQEC*QLGQVCFLFWCLYM
Trigger: CATGTACAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR GCA 90 bp GACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTaGAACCATGGACTTCCAACCCATGGAAAAGAAAGGTGCCAGCTA +
Preference number: 1 (lower is better)
Translates to: DIIIQVMIRLLYLPL*NHGLPTHGKERCQL
Trigger: TAGCTGGCACCTTTCTTTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp TTTATAAGATGCCGGAGAAATAAGCTTCCAAATGACTGTGATGATTaGGCAGGTTTGGGACCATGGATGTGGGGGAAGGCTCCGTCGGAA +
Preference number: 1 (lower is better)
Translates to: FIRCRRNKLPNDCDD*AGLGPWMWGKAPSE
Trigger: TTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTATTTCTCCGGCATCTTATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GCACTTGGCGTCTCATGTCACCTCACAGCAACTGTGACTGACGGATaGCATCAGCTTATTTCACAGATGAAAATAACAGACATGGGGAAG +
Preference number: 1 (lower is better)
Translates to: ALGVSCHLTATVTDG*HQLISQMKITDMGK
Trigger: CTTCCCCATGTCTGTTATTTTCATCTGTGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGACGCCAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp GCAACTGGAATCTGTCTGGAGAGAAAACCTCAGGACACGGGCATATaGTCGTCACACATGTGGGCATTCACGGATTTTAGAATCGTATGT +
Preference number: 1 (lower is better)
Translates to: ATGICLERKPQDTGI*SSHMWAFTDFRIVC
Trigger: ACATACGATTCTAAAATCCGTGAATGCCCACATGTGTGACGACCATATGCCCGTGTCCTGAGGTTTTCTCTCCAGACAGATTCCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp ATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTaGTCTCTGTTGATCCAGATAAAGTCCACCTTATGGAGCTTCATG +
Preference number: 1 (lower is better)
Translates to: ISSLVSRLTNHSKDR*SLLIQIKSTLWSFM
Trigger: CATGAAGCTCCATAAGGTGGACTTTATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 90 bp AGCAGTGGAAACATTCATGAAACACGCCAAGCACCTACTAGGTGGTaGCGCTATTCTAGTCACTGGGGACACAGAGACAAATCATTCACT +
Preference number: 1 (lower is better)
Translates to: SSGNIHETRQAPTRW*RYSSHWGHRDKSFT
Trigger: AGTGAATGATTTGTCTCTGTGTCCCCAGTGACTAGAATAGCGTCACCACCTAGTAGGTGCTTGGCGTGTTTCATGAATGTTTCCACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 90 bp GTCTTTACAGATAGGCTGATGATAAAGTGTTCCGAAGTCTCAATCTaGAAGTGGAGAAGGGTGCTCCAAGTGTCAGGCGATGCAGAAGCA +
Preference number: 1 (lower is better)
Translates to: VFTDRLMIKCSEVSI*KWRRVLQVSGDAEA
Trigger: TGCTTCTGCATCGCCTGACACTTGGAGCACCCTTCTCCACTTTCAGATTGAGACTTCGGAACACTTTATCATCAGCCTATCTGTAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 90 bp CTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCAGTaGGCTTGTGTTTGTGCTTTTGTTCCCCAAATTACAAGTGACAAT +
Preference number: 1 (lower is better)
Translates to: LSSQNSAMAPGKVVQ*ACVCAFVPQITSDN
Trigger: ATTGTCACTTGTAATTTGGGGAACAAAAGCACAAACACAAGCCCACTGAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 90 bp TGTGTGAGACATCCTGTGCTAAACAGATTCTGCCACGTTTCCAAATaGTTTGGCACAGCCTGTTTACATCCTCCAACCTTAAGTCAGAAC +
Preference number: 1 (lower is better)
Translates to: CVRHPVLNRFCHVSK*FGTACLHPPTLSQN
Trigger: GTTCTGACTTAAGGTTGGAGGATGTAAACAGGCTGTGCCAAATCATTTGGAAACGTGGCAGAATCTGTTTAGCACAGGATGTCTCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAGCCCAGAGAGGCTCTaGGGGACGCGCCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSPERL*GTRQER
Trigger: TCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGGAGTGGTTGCCCTCTaGCCCCTCGAACCCCACCCC +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGGVVAL*PLEPHP
Trigger: GGGGTGGGGTTCGAGGGGGCAGAGGGCAACCACTCC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGGTTTGGAGGAGTGGTTaGCCTCTGCCCCCTCGAACC +
Preference number: 2 (lower is better)
Translates to: YRAQRGSEGRARREGDGEVWRSG*PLPPRT
Trigger: GGTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAAC...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCCCTTCGATCCAGGAGTaGTGGCAGCTGGGGCAAGTA +
Preference number: 2 (lower is better)
Translates to: SGRPGWVRVCSPVMESFFPSIQE*WQLGQV
Trigger: TACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGG...GAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGGAGTGGTTGCCCTCTaGCCCCTCGAACCCCACCCC +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWGVVAL*PLEPHP
Trigger: GGGGTGGGGTTCGAGGGGGCAGAGGGCAACCACTCC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCCCCTTCCCAGGGCCTaGCTCAGCGTCTTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGPLPRA*LSVFLH
Trigger: GTGGAGGAAGACGCTGAGGCAGGCCCTGGGAAGGGG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCATTGGGTGGGTCATCTaGGGCTGGTCCCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGIGWVI*GWSLWG
Trigger: CCCCCACAGGGACCAGCCTCAGATGACCCACCCAAT...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCTCAGATGGAGGAGGTaGGGCCCACCCTGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVLRWRR*GPPCPL
Trigger: CAGAGGACAGGGTGGGCCTCACCTCCTCCATCTGAG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAGTTCATCTGCCCCTTaGGGTCTCCTGTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSSSAP*GLLFSL
Trigger: CAGAGAGAACAGGAGACCCCAAGGGGCAGATGAACT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGCAGGTTTGGGACCATaGATGTGGGGGAAGGCTCCG +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGAGLGP*MWGKAP
Trigger: CGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp GCACGAGCCCCGCTTTCCACCCACCCAAACCGAATTAGCCTCTCCTaGACTGCAGGCCCCACTCCTCCTCTCGTATTCTTCTTCCCGTTC +
Preference number: 2 (lower is better)
Translates to: ARAPLSTHPNRISLS*TAGPTPPLVFFFPF
Trigger: GAACGGGAAGAAGAATACGAGAGGAGGAGTGGGGCCTGCAGTCAAGGAGAGGCTAATTCGGTTTGGGTGGGTGGAAAGCGGGGCTCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp GAGCCAGTCTCGGCTAATGTTCCTCATCCCTCCCTACCTTCAACCTaGTCTGCCAGCCTGGTGACTCTCCATGTTGCCCATGCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: EPVSANVPHPSLPST*SASLVTLHVAHAPS
Trigger: GGAGGGGGCATGGGCAACATGGAGAGTCACCAGGCTGGCAGACAAGGTTGAAGGTAGGGAGGGATGAGGAACATTAGCCGAGACTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGAATCTACAGCAGACTaGACAAGGCACTGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPESTAD*TRHCPF
Trigger: GAAGGGACAGTGCCTTGTTCAGTCTGCTGTAGATTC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCCCCACAGTATGTGCTaGGAGAGCCTTTGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGPHSMC*ESLCCL
Trigger: GAGGCAGCAAAGGCTCTCTCAGCACATACTGTGGGG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCTCAGATGGAGGAGGTaGGGCCCACCCTGTCCTCTG +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLRWRR*GPPCPL
Trigger: CAGAGGACAGGGTGGGCCTCACCTCCTCCATCTGAG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGAGAGGGCAAAGGACTaGGGGCAGGGCTCAAATGTG +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGERAKD*GQGSNV
Trigger: CACATTTGAGCCCTGCCCTCAGTCCTTTGCCCTCTC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTCTGCTGTTCCCTCCTaGCCAGACAGGGACAGACGC +
Preference number: 2 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFSAVPS*PDRDRR
Trigger: GCGTCTGTCCCTGTCTGGGCAGGAGGGAACAGCAGA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTCCGATGAGCACGGCATaGTCAGAGGCAAAGATCCTG +
Preference number: 2 (lower is better)
Translates to: PRLGARLQPRDGVFLLLVPMSTA*SEAKIL
Trigger: CAGGATCTTTGCCTCTGAGCATGCCGTGCTCATCGG...AACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp ACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCCAGCTGGGGCAAGTATaGTTTCTTTTCTGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: TFWNTLLQSGRPGWVRVCQLGQV*FLFWCL
Trigger: CAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTG...GCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTTGGGACCATGGATGTaGGGGAAGGCTCCGTCGGAA +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGLGPWM*GKAPSE
Trigger: TTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCCCAGTCCAGGGAGATaGAGGCTTGGTGCAAGCACG +
Preference number: 2 (lower is better)
Translates to: CINSLHLCRSSRRALPDWPSPGR*RLGAST
Trigger: CGTGCTTGCACCAAGCCTCCATCTCCCTGGACTGGG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTGCAGCGCCCTCTCGTaGGCAACTGGAATCTGTCTG +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGCSALS*ATGICL
Trigger: CAGACAGATTCCAGTTGCCCACGAGAGGGCGCTGCA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CCACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTCCATCTGCAGGCCAATaGCCTTCATGTCATTCTTGC +
Preference number: 2 (lower is better)
Translates to: PLSGTPCSSQAAQAGCASPSAGQ*PSCHSC
Trigger: GCAAGAATGACATGAAGGCCATTGGCCTGCAGATGG...AGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CAA 90 bp TCCCCTCCCACGAATGCCCCAGCTCAGTGTATTAATAGCCTGCACTaGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCATTTCAG +
Preference number: 2 (lower is better)
Translates to: SPPTNAPAQCINSLH*CRSSRRALPDWSFQ
Trigger: CTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACACTGAGCTGGGGCATTCGTGGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp CTGCCTCCCAGAGGGCAAAGGTTTGTCCACTGTGTCTCCAACAGGTaGGCCCAGAGCCAGTCTCGGCTAATGTTCCTCATCCCTCCCTAC +
Preference number: 2 (lower is better)
Translates to: LPPRGQRFVHCVSNR*AQSQSRLMFLIPPY
Trigger: GTAGGGAGGGATGAGGAACATTAGCCGAGACTGGCTCTGGGCCAACCTGTTGGAGACACAGTGGACAAACCTTTGCCCTCTGGGAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGATTGGGTGGGTCATCTaGGGCTGGTCCCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAIGWVI*GWSLWG
Trigger: CCCCCACAGGGACCAGCCTCAGATGACCCACCCAAT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTGTGAGTTTCCCTGGTaGGTTGTGTGCCTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWCEFPW*VVCLPR
Trigger: CCTGGGGAGGCACACAACTCACCAGGGAAACTCACA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTCCTGCTGCCTTCGATaGCATGTCCACCGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWSCCLR*HVHRGR
Trigger: TCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp GTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGTATTGAGCCTCCTTGGAAGCAAAGGGGGTaGTGCCGATGCCTGCCCCGA +
Preference number: 2 (lower is better)
Translates to: VQMSCTYAAPGSGRIEPPWKQRG*CRCLPR
Trigger: TCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCA...AGGAGGCTCAATACGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGTTTGGAGGAGTGGTTaGCCTCTGCCCCCTCGAACC +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPVWRSG*PLPPRT
Trigger: GGTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAAC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGAGGGGCAGGGAAAGATaGTGCTTATTTCTCCCTATG +
Preference number: 2 (lower is better)
Translates to: YRAQRGSEGRARREGDGERGRER*CLFLPM
Trigger: CATAGGGAGAAATAAGCAGCATCTTTCCCTGCCCCT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGAGATGGAGGCTTGGTaGAAGCACGAGCCCCGCTTT +
Preference number: 2 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVEMEAW*KHEPRF
Trigger: AAAGCGGGGCTCGTGCTTGCACCAAGCCTCCATCTC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTGCAGGTTTGGGACCATaGATGTGGGGGAAGGCTCCG +
Preference number: 2 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSAGLGP*MWGKAP
Trigger: CGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGC...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAATGACTGTGATGATTaGGCAGGTTTGGGACCATGG +
Preference number: 2 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPNDCDD*AGLGPW
Trigger: CCATGGTCCCAAACCTGCCCAATCATCACAGTCATT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp ACTGCCACTCACGGACCAGTCTCACTTCCTGGGAAACAAACCCGCTaGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCAACTGGAAT +
Preference number: 2 (lower is better)
Translates to: TATHGPVSLPGKQTR*RSVILQRPLVGNWN
Trigger: ATTCCAGTTGCCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGTCCGTGAGTGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCTGTTGATGGCCGATaGTGCCCATCTGCACATCTG +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPVDGR*CPSAHL
Trigger: CAGATGTGCAGATGGGCATCATCGGCCATCAACAGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTCTGCTGTTCCCTCCTaGCCAGACAGGGACAGACGC +
Preference number: 2 (lower is better)
Translates to: STDSTEGKRFQECVASGWSAVPS*PDRDRR
Trigger: GCGTCTGTCCCTGTCTGGGCAGGAGGGAACAGCAGA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCCTATCAGGACTGACTaGAAGGTGGAGGATGCCCAG +
Preference number: 2 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVPIRTD*KVEDAQ
Trigger: CTGGGCATCCTCCACCTTGCAGTCAGTCCTGATAGG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGCGGCAGTGAGAAGCTaGCAGCTAGAGAAACTGACC +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRAAVRS*QLEKLT
Trigger: GGTCAGTTTCTCTAGCTGGCAGCTTCTCACTGCCGC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTGGCCTTGGGGAGTTTaGAGCTTCATGGGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: CINSLHLCRSSRRALPDWWPWGV*SFMGED
Trigger: ATCCTCCCCCATGAAGCTGCAAACTCCCCAAGGCCA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTTGGGACCATGGATGTaGGGGAAGGCTCCGTCGGAA +
Preference number: 2 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSLGPWM*GKAPSE
Trigger: TTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTTCCATCCACCCAACTaGCTCATCCCCTGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWFHPPN*LIPCRS
Trigger: TGACCTGCAGGGGATGAGCCAGTTGGGTGGATGGAA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCAGGACACGGGCATATaGTCGTCACACATGTGGGCA +
Preference number: 2 (lower is better)
Translates to: CINSLHLCRSSRRALPDWQDTGI*SSHMWA
Trigger: TGCCCACATGTGTGACGACCATATGCCCGTGTCCTG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGAGGCAGACAGAACCTaGACCTGTGAACTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWEADRT*TCELSP
Trigger: TGGGGAGAGTTCACAGGTCCAGGTTCTGTCTGCCTC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTAGGAGTGCTGGCAGCTaGGGCAAGTATGCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: PRLGARLQPRDGVFLLLVRSAGS*GKYAFF
Trigger: AAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCT...AACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR TCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCAGCCAGAGTGTGGCTaGGCTGAGCTTCCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAQPECG*AELPGL
Trigger: TAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGCCCCTTTCCCTTTaGTTAACTGCCACTCACGGA +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQPLSL*LTATHG
Trigger: TCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCCTATCAGGACTGACTaGAAGGTGGAGGATGCCCAG +
Preference number: 2 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSPIRTD*KVEDAQ
Trigger: CTGGGCATCCTCCACCTTGCAGTCAGTCCTGATAGG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTCCTCACTCCCATCCTaGTCTGTCCCAGTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: STDSTEGKRFQECVASGWSSLPS*SVPVLR
Trigger: CCTGAGGACTGGGACAGAGCAGGATGGGAGTGAGGA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TCATGTTGTCTTGGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATCAGAGGCAAAGATCCTaGGGGTGGGGGTCCCATAAG +
Preference number: 2 (lower is better)
Translates to: SCCLGHLRSRSAGSWGKYQRQRS*GWGSHK
Trigger: CTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTG...ATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGATGATTGGGCAGGTTTaGGACCATGGATGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVMIGQV*DHGCGG
Trigger: TCCCCCACATCCATGGTCCCAAACCTGCCCAATCAT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGACGCAAACAGAGGCTaGAAAACAGAGACAGAGGGA +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGDANRG*KTETEG
Trigger: TCCCTCTGTCTCTGTTTTCCAGCCTCTGTTTGCGTC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGATGCCCAGGAAATGTaGGGCTCACAGGAGCTCATG +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPDAQEM*GSQELM
Trigger: CATGAGCTCCTGTGAGCCCCACATTTCCTGGGCATC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCCATTGGAAAGTGCCTaGTTCCAACCCCATGATGGC +
Preference number: 2 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVPLESA*FQPHDG
Trigger: GCCATCATGGGGTTGGAACCAGGCACTTTCCAATGG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGATGCGGGTGGGAGCCTaGTGGAAATCTGTTACGAGA +
Preference number: 2 (lower is better)
Translates to: CINSLHLCRSSRRALPDWMRVGA*WKSVTR
Trigger: TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCAT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGGAGGAACCGACATCTaGTCTACACTCTGTGCTAGG +
Preference number: 2 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFGGTDI*STLCAR
Trigger: CCTAGCACAGAGTGTAGACCAGATGTCGGTTCCTCC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCGTATGCTTTCTTTTCTaGTGCCTGTACATGATACTC +
Preference number: 2 (lower is better)
Translates to: SGRPGWVRVCSPVMESFFVCFLF*CLYMIL
Trigger: GAGTATCATGTACAGGCACCAGAAAAGAAAGCATAC...GAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CAA 90 bp ACTCCAGGTGTGAGTTTCCCTGGTGAGTTGTGTGCCTCCCCAGGCTaGCTGGAAATTAAACACGATCTGGTTGGAAGGCCCCAACACCAG +
Preference number: 2 (lower is better)
Translates to: TPGVSFPGELCASPG*LEIKHDLVGRPQHQ
Trigger: CTGGTGTTGGGGCCTTCCAACCAGATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCACACAACTCACCAGGGAAACTCACACCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp TGGGGAGCTTTGGAACAGGGCGTTGTCTTCCCAGCCCCTTTCCCTTaGATTAACTGCCACTCACGGACCAGTCTCACTTCCTGGGAAACA +
Preference number: 2 (lower is better)
Translates to: WGALEQGVVFPAPFP*INCHSRTSLTSWET
Trigger: TGTTTCCCAGGAAGTGAGACTGGTCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGGGAAGACAACGCCCTGTTCCAAAGCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp AGGAGGTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTaGCCCAGTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGG +
Preference number: 2 (lower is better)
Translates to: RRSRAICRPMAFMSF*PSADVMYICSSRKR
Trigger: CCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGAATCTACAGCAGACTaGACAAGGCACTGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWESTAD*TRHCPF
Trigger: GAAGGGACAGTGCCTTGTTCAGTCTGCTGTAGATTC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGAGGGGCAGGGAAAGATaGTGCTTATTTCTCCCTATG +
Preference number: 2 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGRGRER*CLFLPM
Trigger: CATAGGGAGAAATAAGCAGCATCTTTCCCTGCCCCT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCATCCCCTTCCTATTaGCCCTTTCAGAAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPSPSY*PFQKRA
Trigger: AGCTCTCTTCTGAAAGGGGCAATAGGAAGGGGATGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGATGGTCAGACCATaGGTGCTGTACACTCACATG +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQMVRP*VLYTHM
Trigger: CATGTGAGTGTACAGCACGCATGGTCTGACCATCTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGGAGCTGAACTGAGGTaGAATGTCTTGAGCACTTGG +
Preference number: 2 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFGAELR*NVLSTW
Trigger: CCAAGTGCTCAAGACATTCCACCTCAGTTCAGCTCC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGCTCACAGGAGCTCATaGTGTGGCACAGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRAHRSS*CGTDGN
Trigger: ATTTCCATCTGTGCCACACCATGAGCTCCTGTGAGC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCCCCTTTGCAACCATaGACTTCCAACCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPPLQP*TSNPWK
Trigger: TTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCAGGACACGGGCATATaGTCGTCACACATGTGGGCA +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAQDTGI*SSHMWA
Trigger: TGCCCACATGTGTGACGACCATATGCCCGTGTCCTG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGACCAGTCTCACTTCCTaGGAAACAAACCCGCTTGAG +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRTSLTS*ETNPLE
Trigger: CTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCACAGAACAGTGCAATaGCACCTGGCAAAGTGGTTC +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRHRTVQ*HLAKWF
Trigger: GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGATAAGGGCTGTCTaGGCCCAAGACAGATTAAGG +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQIRAV*AQDRLR
Trigger: CCTTAATCTGTCTTGGGCCCAGACAGCCCTTATCTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTCCTGTTCTCTCTGTTaGGCAGGATTAGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTSCSLC*AGLGGP
Trigger: GGGACCCCCTAATCCTGCTCAACAGAGAGAACAGGA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCAAGGAATGTGCATTTaGAGAAGGCTCCTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGQGMCI*RRLLQV
Trigger: TACTTGGAGGAGCCTTCTTCAAATGCACATTCCTTG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAGCCCAGAGAGGCTCTaGGGGACGCGCCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSPERL*GTRQER
Trigger: TCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTCATCATCCAGGTTATaGTCCGGCTTCTTTACCTCC +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRSSSRL*SGFFTS
Trigger: GGAGGTAAAGAAGCCGGATCATAACCTGGATGATGA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGAACATGAAGTCTCTTaGCTTCACAGAGATGGAGCC +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDREHEVS*LHRDGA
Trigger: GGCTCCATCTCTGTGAAGTCAAGAGACTTCATGTTC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGAACATGAAGTCTCTTaGCTTCACAGAGATGGAGCC +
Preference number: 2 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFEHEVS*LHRDGA
Trigger: GGCTCCATCTCTGTGAAGTCAAGAGACTTCATGTTC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGAGCCTTGGGGAAGGGTaGTTTACACTGTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSLGEG*FTLSRR
Trigger: TCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCTGACTATTTGTATATaGGGGTGGGAGCCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLTICI*GWEPGG
Trigger: TCCACCAGGCTCCCACCCGCATATACAAATAGTCAG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCCAAGTCCTTCCACCTaGTCCCACCCACTATATTAT +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRPSPST*SHPLYY
Trigger: ATAATATAGTGGGTGGGAGCAGGTGGAAGGACTTGG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCAAGTCCTTCCACCTaGTCCCACCCACTATATTAT +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPSPST*SHPLYY
Trigger: ATAATATAGTGGGTGGGAGCAGGTGGAAGGACTTGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGCCGTCGGAAAATGTTTaGAGGAGTGGTTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: STDSTEGKRFQECVASGWPSENV*RSGCPL
Trigger: CAGAGGGCAACCACTCCTCCAAACATTTTCCGACGG...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGATGATTGGGCAGGTTTaGGACCATGGATGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAMIGQV*DHGCGG
Trigger: TCCCCCACATCCATGGTCCCAAACCTGCCCAATCAT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGACGCAAACAGAGGCTaGAAAACAGAGACAGAGGGA +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPDANRG*KTETEG
Trigger: TCCCTCTGTCTCTGTTTTCCAGCCTCTGTTTGCGTC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCAGGAGCTCATGGTGTaGCACAGATGGAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSQELMV*HRWKCP
Trigger: TGGACATTTCCATCTGTGCCACACCATGAGCTCCTG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp TTCTCTCTGTTGAGCAGGATTAGGGGGTCCCTAGGCTTTGTCTTATaGGGTGGGTCATCTGAGGCTGGTCCCTGTGGGGGCATTTATACT +
Preference number: 2 (lower is better)
Translates to: FSLLSRIRGSLGFVL*GGSSEAGPCGGIYT
Trigger: AGTATAAATGCCCCCACAGGGACCAGCCTCAGATGACCCACCCAATAAGACAAAGCCTAGGGACCCCCTAATCCTGCTCAACAGAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGTTTATACTAATGCAATaGAGCAGACCCATGGTGTGG +
Preference number: 2 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGFILMQ*SRPMVW
Trigger: CCACACCATGGGTCTGCTTCATTGCATTAGTATAAA...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCAAGGAATGTGCATTTaGAGAAGGCTCCTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVQGMCI*RRLLQV
Trigger: TACTTGGAGGAGCCTTCTTCAAATGCACATTCCTTG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGAAGAATCCAAAACGGTaGCATGCATGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: CARLWVPMSGLGEFAASWKNPKR*HACVCV
Trigger: CACACACACACATGCATGTCACCGTTTTGGATTCTT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGGCAGGGAAAGATGCTaGTTATTTCTCCCTATGCAA +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRGRERC*LFLPMQ
Trigger: TTGCATAGGGAGAAATAAGCAGCATCTTTCCCTGCC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGGCAGGGAAAGATGCTaGTTATTTCTCCCTATGCAA +
Preference number: 2 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFGRERC*LFLPMQ
Trigger: TTGCATAGGGAGAAATAAGCAGCATCTTTCCCTGCC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCATCCCCTTCCTATTaGCCCTTTCAGAAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAPSPSY*PFQKRA
Trigger: AGCTCTCTTCTGAAAGGGGCAATAGGAAGGGGATGG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACCTCAGGGTATGTTTTaGCTTCCCCTTCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRPQGMF*LPLPRA
Trigger: GGCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGGTGCCTCCCCAGGCTTaGTGGAAATTAAACACGATC +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAVPPQA*WKLNTI
Trigger: GATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCAC...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCTGACTATTTGTATATaGGGGTGGGAGCCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAALTICI*GWEPGG
Trigger: TCCACCAGGCTCCCACCCGCATATACAAATAGTCAG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCAATGAAGCAGACCCATaGTGTGGACTTGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTNEADP*CGLGAE
Trigger: CTCTGCCCCAAGTCCACACCATGGGTCTGCTTCATT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCAGGAGCTCATGGTGTaGCACAGATGGAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAQELMV*HRWKCP
Trigger: TGGACATTTCCATCTGTGCCACACCATGAGCTCCTG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGCCCCCTTTGCAACCATaGACTTCCAACCCATGGAAA +
Preference number: 2 (lower is better)
Translates to: STDSTEGKRFQECVASGWPPLQP*TSNPWK
Trigger: TTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGG...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGAAATTAAACACGATCTaGTTGGAAGGCCCCAACACC +
Preference number: 2 (lower is better)
Translates to: CINSLHLCRSSRRALPDWKLNTI*LEGPNT
Trigger: GGTGTTGGGGCCTTCCAACCAGATCGTGTTTAATTT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CTCGAAAGACCGCTGGTCTCTGTTGATCCAGATAAAGTCCACCTTATGGAGCTTTCGATCCAGGAGTGCTaGCAGCTGGGGCAAGTATGC +
Preference number: 2 (lower is better)
Translates to: LERPLVSVDPDKVHLMELSIQEC*QLGQVC
Trigger: GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGA...AAGCTCCATAAGGTGGACTTTATCTGGATCAACAGAGACCAGCGGTCTTTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CCA 90 bp TTGTTGGCCAGGAGGTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCCACTCGAAAGACCGCTaGTCTCTGTTGATCCAGATA +
Preference number: 2 (lower is better)
Translates to: LLARRSRAICRPMAFMSFHSKDR*SLLIQI
Trigger: TATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTG...GAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCTGGCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CAA 90 bp TGCCGGAGAAATAAGCTTCCAAATGACTGTGATGATTGGGCAGGTTaGGGACCATGGATGTGGGGGAAGGCTCCGTCGGAAAATGTTTGG +
Preference number: 2 (lower is better)
Translates to: CRRNKLPNDCDDWAG*GPWMWGKAPSENVW
Trigger: CCAAACATTTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTATTTCTCCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp CAATCCCATTGGAAAGTGCCTGGTTCCAACCCCATGATGGCAGCCTaGGGGAAGGGTGCTTTACACTGTCAAGAAGAGAACCTATCAGGA +
Preference number: 2 (lower is better)
Translates to: QSHWKVPGSNPMMAA*GKGALHCQEENLSG
Trigger: TCCTGATAGGTTCTCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCTGCCATCATGGGGTTGGAACCAGGCACTTTCCAATGGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCAGCCAGAGTGTGGCTaGGCTGAGCTTCCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: RILESYVQVLPPAPTHYIQPECG*AELPGL
Trigger: TAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGTCTGGTGCCTGTACATaGTACTCTGCAGAATGGAAG +
Preference number: 2 (lower is better)
Translates to: LVHLQFSQQAHKPLERPLSGACT*YSAEWK
Trigger: CTTCCATTCTGCAGAGTATCATGTACAGGCACCAGA...CAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTTTAGTTTCCTTCTGTaGCCCAGAGAGCGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPFSFLL*PRERFV
Trigger: GACAAAACGCTCTCTGGGGCACAGAAGGAAACTAAA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp GTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTGCAGACTGTACATGATACTCTaGAGAATGGAAGCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: VKGHLQANGLHVILAQCRLYMIL*RMEAKG
Trigger: CCCCTTTGCTTCCATTCTGCAGAGTATCATGTACAG...TCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp TTGGAAAAATCTGAAGCCGAACTTCTCACAATGGCCCTTCAGCACCTTGGCCAGGATGTCATGTACATATaGAGCTCCAGGAAGCGGCCG +
Preference number: 2 (lower is better)
Translates to: LEKSEAELLTMALQHLGQDVMYI*SSRKRP
Trigger: CGGCCGCTTCCTGGAGCTGCATATGTACATGACATC...CTGGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGGCTTCAGATTTTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp TCTTCTCCTTGTTGGCCAGGAGGTCAAGGGCCATCTGCAGGCCAATGGCCTTCAGTCATTCTTGCCCAGTaGAGATGTCATGTACATATG +
Preference number: 2 (lower is better)
Translates to: SSPCWPGGQGPSAGQWPSVILAQ*RCHVHM
Trigger: CATATGTACATGACATCTGCACTGGGCAAGAATGAC...TGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCTGGCCAACAAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAAAATGTTTGGAGGAGTaGTTGCCCTCTGCCCCCTCG +
Preference number: 2 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRKCLEE*LPSAPS
Trigger: CGAGGGGGCAGAGGGCAACCACTCCTCCAAACATTT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCGGTGTAGACAGAGATaGGAAAGAATCCAAAACGGT +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPRCRQR*ERIQNG
Trigger: ACCGTTTTGGATTCTTTCCCATCTCTGTCTACACCG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGTGTCTCCAACAGGTTaGCCCAGAGCCAGTCTCGGC +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTVSPTG*PRASLG
Trigger: GCCGAGACTGGCTCTGGGCCAACCTGTTGGAGACAC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTGTATCTCAGAGCCCTTaGACGACCTTTGACTCTTTC +
Preference number: 2 (lower is better)
Translates to: HLRSRSAGSWGKYAFFSGVSQSP*TTFDSF
Trigger: GAAAGAGTCAAAGGTCGTCCAAGGGCTCTGAGATAC...ACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CAA 90 bp GGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCCCCCTTaGCAACCATGGACTTCCAACCCATGGAAAAGAAAGGTGCCAGCT +
Preference number: 2 (lower is better)
Translates to: GHHHPGYDPASLPPP*QPWTSNPWKRKVPA
Trigger: AGCTGGCACCTTTCTTTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAAGAACCTATCAGGACTaGCTGCAAGGTGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRRTYQD*LQGGGC
Trigger: GCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTCCCCAAATTACAAGTaGCAATTAGGTGCAAAAGAC +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRSPNYK*QLGAKD
Trigger: GTCTTTTGCACCTAATTGTCACTTGTAATTTGGGGA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAGCAGACCCATGGTGTaGACTTGGGGCAGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSRPMV*TWGRAW
Trigger: CCAAGCTCTGCCCCAAGTCCACACCATGGGTCTGCT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAAATGTTTGGAGGAGTaGTTGCCCTCTGCCCCCTCG +
Preference number: 2 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPKCLEE*LPSAPS
Trigger: CGAGGGGGCAGAGGGCAACCACTCCTCCAAACATTT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGAGGGAGGAGGAACTaGTGGATAATATGTGATAAA +
Preference number: 2 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPRGRRN*WIICDK
Trigger: TTTATCACATATTATCCATCAGTTCCTCCTCCCTCT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGCTTATTTCTCCCTATaGAAATGGATTTGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRAYFSL*KWIWWK
Trigger: TTTCCACCAAATCCATTTGCATAGGGAGAAATAAGC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp TCGGCCTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACTGCTTTCTTTTCTGGTaGCTGTACATGATACTCTGC +
Preference number: 2 (lower is better)
Translates to: SAWSISSLVSRLTNHSKDCFLFW*LYMILC
Trigger: GCAGAGTATCATGTACAGGCACCAGAAAAGAAAGCA...GTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAGGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGGAGCTGAACTGAGGTaGAATGTCTTGAGCACTTGG +
Preference number: 2 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAGAELR*NVLSTW
Trigger: CCAAGTGCTCAAGACATTCCACCTCAGTTCAGCTCC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCTCTGTGCTAGGCTTTaGGTCCCCATGTCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTLCARL*VPMSGL
Trigger: AAGGCCAGACATGGGGACCCAAAGCCTAGCACAGAG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TTGGAAAAATCTGAAGCCGAACTTCTCACAATGGCCCTTCAGCACCTTGGCCAGAGCTTCATGTTGTCTTaGACACCTTCGATCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LEKSEAELLTMALQHLGQSFMLS*TPSIQE
Trigger: CTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCT...CTGGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGGCTTCAGATTTTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR GCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTGGTCATTTCAGGAATaGCTGCTGTCTCCGTCAGCG +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTWSFQE*LLSPSA
Trigger: CGCTGACGGAGACAGCAGGCATTCCTGAAATGACCA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCAATGACTGTGATGATTaGGCAGGTTTGGGACCATGG +
Preference number: 2 (lower is better)
Translates to: FTLSRREPIRTDCKVEDANDCDD*AGLGPW
Trigger: CCATGGTCCCAAACCTGCCCAATCATCACAGTCATT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp CTCCCACCCACTATATTATTAAGTCCTAAACGAACAGCTGACTATTaGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGGG +
Preference number: 2 (lower is better)
Translates to: LPPTILLSPKRTADY*YMRVGAWWKSVTRG
Trigger: CCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGTTCGTTTAGGACTTAATAATATAGTGGGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGCCTTGGGGAAGGGTaGTTTACACTGTCAAGAAGA +
Preference number: 2 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPSLGEG*FTLSRR
Trigger: TCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGACAGGCTTGATGATTaGCTGAAGGAGGAAGATGGG +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTDRLDD*LKEEDG
Trigger: CCCATCTTCCTCCTTCAGCCAATCATCAAGCCTGTC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp GGGCATTTTATTTTAATACTTAGGCCATTCAGGGCCAGCAGCATATaGATAATGGGCACTATAGGAGCCTCCCTTATTGAAGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: GHFILILRPFRASSI*IMGTIGASLIEEPT
Trigger: CGTGGGCTCTTCAATAAGGGAGGCTCCTATAGTGCCCATTATCAATATGCTGCTGGCCCTGAATGGCCTAAGTATTAAAATAAAATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTTTATACTAATGCAATaGAGCAGACCCATGGTGTGG +
Preference number: 2 (lower is better)
Translates to: RILESYVQVLPPAPTHYIFILMQ*SRPMVW
Trigger: CCACACCATGGGTCTGCTTCATTGCATTAGTATAAA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCATGGAAAAGAAAGGTaGCAGCTACAATCCCATTGG +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTHGKER*QLQSHW
Trigger: CCAATGGGATTGTAGCTGGCACCTTTCTTTTCCATG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTGAGATGGAGGCTTGGTaGAAGCACGAGCCCCGCTTT +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIEMEAW*KHEPRF
Trigger: AAAGCGGGGCTCGTGCTTGCACCAAGCCTCCATCTC...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCGTCCAGGAGGGCCCTaGCTGATTGGTCATTTCAGG +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIRPGGP*LIGHFR
Trigger: CCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTAGCAGACCCATGGTGTaGACTTGGGGCAGAGCTTGG +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSISRPMV*TWGRAW
Trigger: CCAAGCTCTGCCCCAAGTCCACACCATGGGTCTGCT...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCGGTGTAGACAGAGATaGGAAAGAATCCAAAACGGT +
Preference number: 2 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTRCRQR*ERIQNG
Trigger: ACCGTTTTGGATTCTTTCCCATCTCTGTCTACACCG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCAGTGCAATGGCACCTaGCAAAGTGGTTCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIQCNGT*QSGSVG
Trigger: GCCCACTGAACCACTTTGCCAGGTGCCATTGCACTG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTAATGAAGCAGACCCATaGTGTGGACTTGGGGCAGAG +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSINEADP*CGLGAE
Trigger: CTCTGCCCCAAGTCCACACCATGGGTCTGCTTCATT...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 90 bp AGGGGCAGGGAAAGATGCTGCTTATTTCTCCCTATGCAAATGGATTaGGTGGAAAATACATATTTCAGGTTTCATTCCCAGATCATCAGA +
Preference number: 2 (lower is better)
Translates to: RGRERCCLFLPMQMD*VENTYFRFHSQIIR
Trigger: TCTGATGATCTGGGAATGAAACCTGAAATATGTATTTTCCACCAAATCCATTTGCATAGGGAGAAATAAGCAGCATCTTTCCCTGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCTCAGAGAGGTCAAATaGTACACCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSILREVK*YTQGHT
Trigger: TGTGTGACCTTGGGTGTATCATTTGACCTCTCTGAG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTAGAGGGAGGAGGAACTaGTGGATAATATGTGATAAA +
Preference number: 2 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIRGRRN*WIICDK
Trigger: TTTATCACATATTATCCATCAGTTCCTCCTCCCTCT...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCAGGAAGCGGCCGTATaGAGCCTCCTCGGCCTGGTC +
Preference number: 3 (lower is better)
Translates to: SGTPCSSQAAQAGCASAAQEAAV*SLLGLV
Trigger: GACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCTG...GGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 72 bp CAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCCGTaGTGGAGTCTTTCTTCTCCTTGTTGGCCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: QAAQAGCASAAP*WSLSSPCWPGG
Trigger: ACCTCCTGGCCAACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR TCA 72 bp GGGGAAGCTTCCAGGGCCACACAGCCAGAGTGTGGCTaGGCTGAGCTTCCAGGCTTAGCCCGCTTCATCCCC +
Preference number: 3 (lower is better)
Translates to: GEASRATQPECG*AELPGLARFIP
Trigger: GGGGATGAAGCGGGCTAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTGTGTGGCCCTGGAAGCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp GGCACAGATGGAAATGTCCAGCTCAGATGGAGGAGGTaGGGCCCACCCTGTCCTCTGCCCAGGGCCGCTCCT +
Preference number: 3 (lower is better)
Translates to: GTDGNVQLRWRR*GPPCPLPRAAP
Trigger: AGGAGCGGCCCTGGGCAGAGGACAGGGTGGGCCTCACCTCCTCCATCTGAGCTGGACATTTCCATCTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTaGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTC +
Preference number: 3 (lower is better)
Translates to: FWNTLLQSGRPG*VRVCSPVMESF
Trigger: GAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGACCCATGGTGTGGACTaGGGGCAGAGCTTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: YRAQRGSEGRARREGDGETHGVD*GQSLER
Trigger: CCTCTCCAAGCTCTGCCCCAAGTCCACACCATGGGT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGATGATTGGGCAGGTTaGGGACCATGGATGTGGGGG +
Preference number: 3 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPDDWAG*GPWMWG
Trigger: CCCCCACATCCATGGTCCCAAACCTGCCCAATCATC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCCAGGTCTCCTGGCCTaGCTGACTCCCAGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGPGLLA*LTPSPG
Trigger: CCCTGGACTGGGAGTCAGCAAGGCCAGGAGACCTGG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp AGCTTCCAGGGCCACACAGCCAGAGTGTGGCTGAGCTaGGCTTCCAGGCTTAGCCCGCTTCATCCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: SFQGHTARVWLS*ASRLSPLHPQA
Trigger: TGCCTGGGGATGAAGCGGGCTAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTGTGTGGCCCTGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CTTGCTGACTCCCAGTCCAGGGAGATGGAGGCTTGGTaGAAGCACGAGCCCCGCTTTCCACCCACCCAAACC +
Preference number: 3 (lower is better)
Translates to: LADSQSREMEAW*KHEPRFPPTQT
Trigger: GGTTTGGGTGGGTGGAAAGCGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCTGGACTGGGAGTCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp TTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTaGAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: LLQSGRPGWVRV*SPVMESFFSLL
Trigger: CAACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCCAGGTCTCCTGGCCTaGCTGACTCCCAGTCCAGGG +
Preference number: 3 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVPGLLA*LTPSPG
Trigger: CCCTGGACTGGGAGTCAGCAAGGCCAGGAGACCTGG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp CCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTaGTTGGTCATTTCAGGAATGCCTGCTGTCTCCGTC +
Preference number: 3 (lower is better)
Translates to: PALVPLVQEGPA*LVISGMPAVSV
Trigger: GACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CTCCCACGAATGCCCCAGCTCAGTGTATTAATAGCCTaGACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTG +
Preference number: 3 (lower is better)
Translates to: LPRMPQLSVLIA*TCAARPGGPCL
Trigger: CAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACACTGAGCTGGGGCATTCGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGCCCCAGAGAGCGTTTaGTCCAAGCCTTCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGAPESV*SKPSQA
Trigger: GGCTTGGGAAGGCTTGGACAAAACGCTCTCTGGGGC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCGAGTCTTTCTTCTCCTaGTTGGCCAGGAGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: TFWNTLLQSGRPGWVRVCESFFS*LARRSR
Trigger: CCTTGACCTCCTGGCCAACAAGGAGAAGAAAGACTC...GCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGACCCATGGTGTGGACTaGGGGCAGAGCTTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: CARLWVPMSGLGEFAASWTHGVD*GQSLER
Trigger: CCTCTCCAAGCTCTGCCCCAAGTCCACACCATGGGT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCCCATGATGGCAGCCTaGGGGAAGGGTGCTTTACAC +
Preference number: 3 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGPMMAA*GKGALH
Trigger: GTGTAAAGCACCCTTCCCCAAGGCTGCCATCATGGG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCCAGCTACAATCCCATaGGAAAGTGCCTGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPPATIP*ESAWFQ
Trigger: TTGGAACCAGGCACTTTCCAATGGGATTGTAGCTGG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCAGGGAGATGGAGGCTaGGTGCAAGCACGAGCCCCG +
Preference number: 3 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAQGDGG*VQARAP
Trigger: CGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCTG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCAGTTTCCCTGGTGAGTaGTGTGCCTCCCCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGSFPGE*CASPGL
Trigger: CAAGCCTGGGGAGGCACACAACTCACCAGGGAAACT...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCTGGCCTTGGGGAGTTaGCAGCTTCATGGGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFLALGS*QLHGGG
Trigger: TCCTCCCCCATGAAGCTGCAAACTCCCCAAGGCCAG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCTCAGGGTATGTTTaGCCTTCCCCTTCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSSGYV*PSPSQG
Trigger: GCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTTATGGAGCTTCATGTaGTCTTGGACACCTTCGATC +
Preference number: 3 (lower is better)
Translates to: SGRPGWVRVCSPVMESFFLWSFM*SWTPSI
Trigger: GATCGAAGGTGTCCAAGACAACATGAAGCTCCATAA...GAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR GCA 72 bp GGAGGGCCCTGCCTGATTGGTCATTTCAGGAATGCCTaGTGTCTCCGTCAGCGCTGTCCTCACAGAACAGTG +
Preference number: 3 (lower is better)
Translates to: GGPCLIGHFRNA*CLRQRCPHRTV
Trigger: CACTGTTCTGTGAGGACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp TCCAGGAGGGCCCTGCCTGATTGGTCATTTCAGGAATaGCTGCTGTCTCCGTCAGCGCTGTCCTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: SRRALPDWSFQE*LLSPSALSSQN
Trigger: GTTCTGTGAGGACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CTGCAGAATGGAAGCAAAGGGGGTGATGCCGATGCCTaGCCCGATGAGCACGGCATGCTCAGAGGCAAAGAT +
Preference number: 3 (lower is better)
Translates to: LQNGSKGGDADA*PDEHGMLRGKD
Trigger: ATCTTTGCCTCTGAGCATGCCGTGCTCATCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCATTCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTTCATCCCCAGGCACTaGGCCTTTCCACGACAGAGA +
Preference number: 3 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVFIPRH*AFPRQR
Trigger: TCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGAA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTCCTCAGGGTATGTTTaGCCTTCCCCTTCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPSSGYV*PSPSQG
Trigger: GCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGGA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCGAATTAGCCTCTCCTaGACTGCAGGCCCCACTCCT +
Preference number: 3 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPRISLS*TAGPTP
Trigger: AGGAGTGGGGCCTGCAGTCAAGGAGAGGCTAATTCG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCTTTGGAACAGGGCGTaGTCTTCCCAGCCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLWNRA*SSQPLS
Trigger: GGAAAGGGGCTGGGAAGACAACGCCCTGTTCCAAAG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTGGAGCCTGGAGGTTTaGCCTCTAGTGGGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRWSLEV*PLVGSF
Trigger: AAAGCTCCCCACTAGAGGCAAAACCTCCAGGCTCCA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp GCTGTACACTCACATGTGTGGTCCTGCTGCCTTCGATaGCATGTCCACCGAGGCAGACAGAACCTGGACCTG +
Preference number: 3 (lower is better)
Translates to: AVHSHVWSCCLR*HVHRGRQNLDL
Trigger: CAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGTGAGTGTACAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CAAGTGTCAGGCGATGCAGAAGCAAAGGCTTGGAGGTaGGAAGCTGCACAGTGTCCTGGGGGAGCACGAAAT +
Preference number: 3 (lower is better)
Translates to: QVSGDAEAKAWR*EAAQCPGGARN
Trigger: ATTTCGTGCTCCCCCAGGACACTGTGCAGCTTCGCACCTCCAAGCCTTTGCTTCTGCATCGCCTGACACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TCTGCAGCGCCCTCTCGTGGGCAACTGGAATCTGTCTaGAGAGAAAACCTCAGGACACGGGCATATGGTCGT +
Preference number: 3 (lower is better)
Translates to: SAAPSRGQLESV*RENLRTRAYGR
Trigger: ACGACCATATGCCCGTGTCCTGAGGTTTTCTCTCCAGACAGATTCCAGTTGCCCACGAGAGGGCGCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp GGAACCGACATCTGGTCTACACTCTGTGCTAGGCTTTaGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: GTDIWSTLCARL*VPMSGLGEFAA
Trigger: AGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACAGAGTGTAGACCAGATGTCGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCTAGGCTTTGTCTTATaGGGTGGGTCATCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGLGFVL*GGSSEA
Trigger: AGCCTCAGATGACCCACCCAATAAGACAAAGCCTAG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTCCGTCGGAAAATGTTaGGAGGAGTGGTTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: CARLWVPMSGLGEFAASWSVGKC*EEWLPS
Trigger: AGAGGGCAACCACTCCTCCAAACATTTTCCGACGGA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCCGTCGGAAAATGTTaGGAGGAGTGGTTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSVGKC*EEWLPS
Trigger: AGAGGGCAACCACTCCTCCAAACATTTTCCGACGGA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGTCTTTACCTCCCCCTTaGCAACCATGGACTTCCAAC +
Preference number: 3 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGSLPPP*QPWTSN
Trigger: GTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGA...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGAGTTTCCCTGGTGAGTaGTGTGCCTCCCCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: TSLTSWETNPLEIRDSAASFPGE*CASPGL
Trigger: CAAGCCTGGGGAGGCACACAACTCACCAGGGAAACT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGGGAAACAAACCCGCTaGAGATCCGTGATTCTGCAG +
Preference number: 3 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRGKQTR*RSVILQ
Trigger: CTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCATTTAAGTAACCCCTaGCCCTGGGAGGAACCGACA +
Preference number: 3 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRHLSNP*PWEEPT
Trigger: TGTCGGTTCCTCCCAGGGCAAGGGGTTACTTAAATG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TGTTGGCCAGGAGGTCAAGGGCCATCTGCAGGCCAATaGCCTTCATGTCATTCTTGCCCAGTGCAGATGTCA +
Preference number: 3 (lower is better)
Translates to: CWPGGQGPSAGQ*PSCHSCPVQMS
Trigger: TGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCTGGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCTAGGCTTTGTCTTATaGGGTGGGTCATCTGAGGCT +
Preference number: 3 (lower is better)
Translates to: CINSLHLCRSSRRALPDWLGFVL*GGSSEA
Trigger: AGCCTCAGATGACCCACCCAATAAGACAAAGCCTAG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCTTTACCTCCCCCTTaGCAACCATGGACTTCCAAC +
Preference number: 3 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSLPPP*QPWTSN
Trigger: GTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCAGGGAGATGGAGGCTaGGTGCAAGCACGAGCCCCG +
Preference number: 3 (lower is better)
Translates to: RILESYVQVLPPAPTHYIQGDGG*VQARAP
Trigger: CGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCTG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTGTGCCTCCCCAGGCTaGCTGGAAATTAAACACGAT +
Preference number: 3 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRCASPG*LEIKHD
Trigger: ATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCACA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp AGGCTGGTCCCTGTGGGGGCATTTATACTAATGCAATaGAGCAGACCCATGGTGTGGACTTGGGGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: RLVPVGAFILMQ*SRPMVWTWGRA
Trigger: AGCTCTGCCCCAAGTCCACACCATGGGTCTGCTTCATTGCATTAGTATAAATGCCCCCACAGGGACCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp TGGAACAGGGCGTTGTCTTCCCAGCCCCTTTCCCTTTaGTTAACTGCCACTCACGGACCAGTCTCACTTCCT +
Preference number: 3 (lower is better)
Translates to: WNRALSSQPLSL*LTATHGPVSLP
Trigger: AGGAAGTGAGACTGGTCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGGGAAGACAACGCCCTGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CACATCTGGGAAACATCCAGATGGTCAGACCATGCGTaGTGTACACTCACATGTGTGGTCCTGCTGCCTTCG +
Preference number: 3 (lower is better)
Translates to: HIWETSRWSDHA*CTLTCVVLLPS
Trigger: CGAAGGCAGCAGGACCACACATGTGAGTGTACAGCACGCATGGTCTGACCATCTGGATGTTTCCCAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp TCTGCACATCTGGGAAACATCCAGATGGTCAGACCATaGGTGCTGTACACTCACATGTGTGGTCCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: SAHLGNIQMVRP*VLYTHMCGPAA
Trigger: GGCAGCAGGACCACACATGTGAGTGTACAGCACGCATGGTCTGACCATCTGGATGTTTCCCAGATGTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp GACTGTGATGATTGGGCAGGTTTGGGACCATGGATGTaGGGGAAGGCTCCGTCGGAAAATGTTTGGAGGAGT +
Preference number: 3 (lower is better)
Translates to: DCDDWAGLGPWM*GKAPSENVWRS
Trigger: ACTCCTCCAAACATTTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp CACGAAAGCCTGGAGCAGCAAGGAGCTGAACTGAGGTaGAATGTCTTGAGCACTTGGCGTCTCATGTCACCT +
Preference number: 3 (lower is better)
Translates to: HESLEQQGAELR*NVLSTWRLMSP
Trigger: AGGTGACATGAGACGCCAAGTGCTCAAGACATTCCACCTCAGTTCAGCTCCTTGCTGCTCCAGGCTTTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp GTTTCCCTGGTGAGTTGTGTGCCTCCCCAGGCTTGCTaGAAATTAAACACGATCTGGTTGGAAGGCCCCAAC +
Preference number: 3 (lower is better)
Translates to: VSLVSCVPPQAC*KLNTIWLEGPN
Trigger: GTTGGGGCCTTCCAACCAGATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCACACAACTCACCAGGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp AGCCTGGTGGAAATCTGTTACGAGAGGGCAAAGGACTaGGGGCAGGGCTCAAATGTGTTAAGGCGGTGTAGA +
Preference number: 3 (lower is better)
Translates to: SLVEICYERAKD*GQGSNVLRRCR
Trigger: TCTACACCGCCTTAACACATTTGAGCCCTGCCCTCAGTCCTTTGCCCTCTCGTAACAGATTTCCACCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CCTCCTTTGCCTCCTCCACAGTTAACCACTGCGAACTaGTTAGCATTTGGGCATCATCGGCCATCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: PPLPPPQLTTAN*LAFGHHRPSAR
Trigger: TCTTGCTGATGGCCGATGATGCCCAAATGCTAAGCAGTTCGCAGTGGTTAACTGTGGAGGAGGCAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTaGAGATGTCATGTACATATGCAGCTCCAGGAAGCG +
Preference number: 3 (lower is better)
Translates to: LQANGLHVILAQ*RCHVHMQLQEA
Trigger: CGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CCA 72 bp CCAAATGACTGTGATGATTGGGCAGGTTTGGGACCATaGATGTGGGGGAAGGCTCCGTCGGAAAATGTTTGG +
Preference number: 3 (lower is better)
Translates to: PNDCDDWAGLGP*MWGKAPSENVW
Trigger: CCAAACATTTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTaGAAATCTGTTACGAGAGGGCAAAGGACTGAGGGC +
Preference number: 3 (lower is better)
Translates to: TADYLYMRVGAW*KSVTRGQRTEG
Trigger: GCCCTCAGTCCTTTGCCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TTCCTGTTGATGGCCGATGATGCCCATCTGCACATCTaGGAAACATCCAGATGGTCAGACCATGCGTGCTGT +
Preference number: 3 (lower is better)
Translates to: FLLMADDAHLHI*ETSRWSDHACC
Trigger: ACAGCACGCATGGTCTGACCATCTGGATGTTTCCCAGATGTGCAGATGGGCATCATCGGCCATCAACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TGTCTTGGACACCTTCGATCCAGGAGTGCTGGCAGCTaGGGCAAGTATGCTTTCTTTTCTGGTGCCTGTACA +
Preference number: 3 (lower is better)
Translates to: CLGHLRSRSAGS*GKYAFFSGACT
Trigger: TGTACAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CCA 72 bp CAGATAAAGTCCACCTTATGGAGCTTCATGTTGTCTTaGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: QIKSTLWSFMLS*TPSIQECWQLG
Trigger: CCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGTGGACTTTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACGAATTAGCCTCTCCTaGACTGCAGGCCCCACTCCT +
Preference number: 3 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRRISLS*TAGPTP
Trigger: AGGAGTGGGGCCTGCAGTCAAGGAGAGGCTAATTCG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCCTGTTCAGTTCAACTaGACCTCACCGATGGACATT +
Preference number: 3 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSPVQFN*TSPMDI
Trigger: AATGTCCATCGGTGAGGTCAAGTTGAACTGAACAGG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGATGATTGGGCAGGTTaGGGACCATGGATGTGGGGG +
Preference number: 3 (lower is better)
Translates to: RILESYVQVLPPAPTHYIDDWAG*GPWMWG
Trigger: CCCCCACATCCATGGTCCCAAACCTGCCCAATCATC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGCCCCAGAGAGCGTTTaGTCCAAGCCTTCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTAPESV*SKPSQA
Trigger: GGCTTGGGAAGGCTTGGACAAAACGCTCTCTGGGGC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGACGTTTCCAAATGATTaGGCACAGCCTGTTTACATC +
Preference number: 3 (lower is better)
Translates to: CARLWVPMSGLGEFAASWTFPND*AQPVYI
Trigger: GATGTAAACAGGCTGTGCCAAATCATTTGGAAACGT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCCGATGGACATTTTGTaGCAAGCAGAAAAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: CINSLHLCRSSRRALPDWPMDIL*QAEKRK
Trigger: TTTCCTCTTTTCTGCTTGCAACAAAATGTCCATCGG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp GTGCTTTACACTGTCAAGAAGAGAACCTATCAGGACTaGCTGCAAGGTGGAGGATGCCCAGGAAATGTGGGG +
Preference number: 3 (lower is better)
Translates to: VLYTVKKRTYQD*LQGGGCPGNVG
Trigger: CCCCACATTTCCTGGGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp TGGTTCCAACCCCATGATGGCAGCCTTGGGGAAGGGTaGTTTACACTGTCAAGAAGAGAACCTATCAGGACT +
Preference number: 3 (lower is better)
Translates to: WFQPHDGSLGEG*FTLSRREPIRT
Trigger: AGTCCTGATAGGTTCTCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCTGCCATCATGGGGTTGGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp TTCAAGTCCTCCTTTGCCTCCTCCACAGTTAACCACTaGGAACTGCTTAGCATTTGGGCATCATCGGCCATC +
Preference number: 3 (lower is better)
Translates to: FKSSFASSTVNH*ELLSIWASSAI
Trigger: GATGGCCGATGATGCCCAAATGCTAAGCAGTTCGCAGTGGTTAACTGTGGAGGAGGCAAAGGAGGACTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp ATAAGCTTCCAAATGACTGTGATGATTGGGCAGGTTTaGGACCATGGATGTGGGGGAAGGCTCCGTCGGAAA +
Preference number: 3 (lower is better)
Translates to: ISFQMTVMIGQV*DHGCGGRLRRK
Trigger: TTTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TGCCGGAGAAATAAGCTTCCAAATGACTGTGATGATTaGGCAGGTTTGGGACCATGGATGTGGGGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: CRRNKLPNDCDD*AGLGPWMWGKA
Trigger: AGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTATTTCTCCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp CGAACAGCTGACTATTTGTATATGCGGGTGGGAGCCTaGTGGAAATCTGTTACGAGAGGGCAAAGGACTGAG +
Preference number: 3 (lower is better)
Translates to: RTADYLYMRVGA*WKSVTRGQRTE
Trigger: CTCAGTCCTTTGCCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp GATGATGCCCATCTGCACATCTGGGAAACATCCAGATaGTCAGACCATGCGTGCTGTACACTCACATGTGTG +
Preference number: 3 (lower is better)
Translates to: DDAHLHIWETSR*SDHACCTLTCV
Trigger: CACACATGTGAGTGTACAGCACGCATGGTCTGACCATCTGGATGTTTCCCAGATGTGCAGATGGGCATCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTaGTTCAGTGGGCTTGTGTTTGTGCTTTTGTTCCCC +
Preference number: 3 (lower is better)
Translates to: CPHRTVQWHLAK*FSGLVFVLLFP
Trigger: GGGGAACAAAAGCACAAACACAAGCCCACTGAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TTCATGTTGTCTTGGACACCTTCGATCCAGGAGTGCTaGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTGC +
Preference number: 3 (lower is better)
Translates to: FMLSWTPSIQEC*QLGQVCFLFWC
Trigger: GCACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTACGTTTCCAAATGATTaGGCACAGCCTGTTTACATC +
Preference number: 3 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSTFPND*AQPVYI
Trigger: GATGTAAACAGGCTGTGCCAAATCATTTGGAAACGT...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCTAGAGAAACTGACCTaGAACATGAAGTCTCTTGAC +
Preference number: 3 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLEKLT*NMKSLD
Trigger: GTCAAGAGACTTCATGTTCAAGGTCAGTTTCTCTAG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp CCTCACATCTTAAAGATGACATCCTCACTCCCATCCTaGTCTGTCCCAGTCCTCAGGGTATGTTTTGCCTTC +
Preference number: 3 (lower is better)
Translates to: PHILKMTSSLPS*SVPVLRVCFAF
Trigger: GAAGGCAAAACATACCCTGAGGACTGGGACAGAGCAGGATGGGAGTGAGGATGTCATCTTTAAGATGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR GCA 72 bp AGTGTTCCGAAGTCTCAATCTGAAAGTGGAGAAGGGTaGTCCAAGTGTCAGGCGATGCAGAAGCAAAGGCTT +
Preference number: 3 (lower is better)
Translates to: SVPKSQSESGEG*SKCQAMQKQRL
Trigger: AAGCCTTTGCTTCTGCATCGCCTGACACTTGGAGCACCCTTCTCCACTTTCAGATTGAGACTTCGGAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATaGACTTCCAACCCATGGAAAAGAAAGGTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: YDPASLPPPLQP*TSNPWKRKVPA
Trigger: AGCTGGCACCTTTCTTTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TTGATTAACTGCCACTCACGGACCAGTCTCACTTCCTaGGAAACAAACCCGCTTGAGATCCGTGATTCTGCA +
Preference number: 3 (lower is better)
Translates to: LINCHSRTSLTS*ETNPLEIRDSA
Trigger: TGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGTCCGTGAGTGGCAGTTAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACCAGCTACAATCCCATaGGAAAGTGCCTGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRPATIP*ESAWFQ
Trigger: TTGGAACCAGGCACTTTCCAATGGGATTGTAGCTGG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCCAGCCCCTTTCCCTTaGATTAACTGCCACTCACGG +
Preference number: 3 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTPAPFP*INCHSR
Trigger: CCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp GTCCTAAACGAACAGCTGACTATTTGTATATGCGGGTaGGAGCCTGGTGGAAATCTGTTACGAGAGGGCAAA +
Preference number: 3 (lower is better)
Translates to: VLNEQLTICICG*EPGGNLLREGK
Trigger: TTTGCCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGTTCGTTTAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp ATCTGTCTGGAGAGAAAACCTCAGGACACGGGCATATaGTCGTCACACATGTGGGCATTCACGGATTTTAGA +
Preference number: 3 (lower is better)
Translates to: ICLERKPQDTGI*SSHMWAFTDFR
Trigger: TCTAAAATCCGTGAATGCCCACATGTGTGACGACCATATGCCCGTGTCCTGAGGTTTTCTCTCCAGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp TTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTaGTCTCTGTTGATCCAGATAAAGTCCACCTTATGG +
Preference number: 3 (lower is better)
Translates to: LVSRLTNHSKDR*SLLIQIKSTLW
Trigger: CCATAAGGTGGACTTTATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTTAAACACGATCTGGTaGGAAGGCCCCAACACCAGG +
Preference number: 3 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTLNTIW*EGPNTR
Trigger: CCTGGTGTTGGGGCCTTCCAACCAGATCGTGTTTAA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCGAACAGCTGACTATTaGTATATGCGGGTGGGAGCC +
Preference number: 3 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTRTADY*YMRVGA
Trigger: GGCTCCCACCCGCATATACAAATAGTCAGCTGTTCG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCCAGAGGGCAAAGGTTaGTCCACTGTGTCTCCAACA +
Preference number: 3 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTPEGKG*STVSPT
Trigger: TGTTGGAGACACAGTGGACAAACCTTTGCCCTCTGG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp AACATTCATGAAACACGCCAAGCACCTACTAGGTGGTaGCGCTATTCTAGTCACTGGGGACACAGAGACAAA +
Preference number: 3 (lower is better)
Translates to: NIHETRQAPTRW*RYSSHWGHRDK
Trigger: TTTGTCTCTGTGTCCCCAGTGACTAGAATAGCGTCACCACCTAGTAGGTGCTTGGCGTGTTTCATGAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp GATAGGCTGATGATAAAGTGTTCCGAAGTCTCAATCTaGAAGTGGAGAAGGGTGCTCCAAGTGTCAGGCGAT +
Preference number: 3 (lower is better)
Translates to: DRLMIKCSEVSI*KWRRVLQVSGD
Trigger: ATCGCCTGACACTTGGAGCACCCTTCTCCACTTTCAGATTGAGACTTCGGAACACTTTATCATCAGCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CCA 72 bp AAACCTCAGGACACGGGCATATGGTCGTCACACATGTaGGCATTCACGGATTTTAGAATCGTATGTCCAAGT +
Preference number: 3 (lower is better)
Translates to: KPQDTGIWSSHM*AFTDFRIVCPS
Trigger: ACTTGGACATACGATTCTAAAATCCGTGAATGCCCACATGTGTGACGACCATATGCCCGTGTCCTGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGTGTTTGGAGGAGTGGTaGCCCTCTGCCCCCTCGAAC +
Preference number: 3 (lower is better)
Translates to: IHISGFIPRSSESEFLVVCLEEW*PSAPSN
Trigger: GTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAACA...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR TCA 72 bp CATCCTGTGCTAAACAGATTCTGCCACGTTTCCAAATaGTTTGGCACAGCCTGTTTACATCCTCCAACCTTA +
Preference number: 3 (lower is better)
Translates to: HPVLNRFCHVSK*FGTACLHPPTL
Trigger: TAAGGTTGGAGGATGTAAACAGGCTGTGCCAAATCATTTGGAAACGTGGCAGAATCTGTTTAGCACAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTCAGGCCGCCCAGGCTaGGTGCGCGTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: APVRPPRLGARLQPRDGVSGRPG*VRVCSP
Trigger: GGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA...GACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCTCAGGCCGCCCAGGCTaGGTGCGCGTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSGRPG*VRVCSP
Trigger: GGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGACTCCGGGGAAGCGCTaGAGCTCGTCCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGETPGKR*SSSRSS
Trigger: GGAGCTCCGGGACGAGCTGCAGCGCTTCCCCGGAGT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTGAGCCCTTGGCCACCATaGCGCTGGCGCCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGWVRVCSPVMESFFSLLSPWPP*RWRRGP
Trigger: GGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGGCT...CAACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGAGCTGCAGTCGAAGTTaGGGCACTGGCCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGESCSRS*GTGRSP
Trigger: AGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCATTGGGTGGGTCATCTaGGGCTGGTCCCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPIGWVI*GWSLWG
Trigger: CCCCCACAGGGACCAGCCTCAGATGACCCACCCAAT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGCCACGGAGTGACCCCTaGCGGGGAGGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLPRSDP*RGGPVP
Trigger: GGGGACTGGCCCTCCCCGTCAGGGGTCACTCCGTGG...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCTGCACACGGCTGCCATaGGGGACACTGCCAGTCCGA +
Preference number: 4 (lower is better)
Translates to: TFWNTLLQSGRPGWVRVCCTRLP*GTLPVR
Trigger: TCGGACTGGCAGTGTCCCGCATGGCAGCCGTGTGCA...GCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp CCACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGGTGATGCCGATGCCTaGCCCGATGAGCACGGCATG +
Preference number: 4 (lower is better)
Translates to: PLSGTPCSSQAAQAGCASGDADA*PDEHGM
Trigger: CATGCCGTGCTCATCGGGGCAGGCATCGGCATCACC...AGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGAGCGCCAGCGTCAGCTaGTCCAGCTTCTCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGESASVS*SSFSSG
Trigger: GCCTGACGAGAAGCTGGACCAGCTGACGCTGGCGCT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGGCCAGGCAGAACAGCTaGCTGCGGTGGTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGEARQNS*LRWLCQ
Trigger: CTGGCACAACCACCGCAGCCAGCTGTTCTGCCTGGC...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGGGTCCCGGTGCGCGCTaGCCGCCAGCCCGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLGPGAR*PPARRA
Trigger: TGCTCTTCGGGCTGGCGGCCAGCGCGCACCGGGACC...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGAGCCCTTGGCCACCATaGCGCTGGCGCCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSPWPP*RWRRGP
Trigger: GGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGGCT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp GGCATGCTCAGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATTCCAGTGGTAGGACTTaGGCCAGCCACGTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: GMLRGKDPAGGGPIRPIDSSGRT*ASHVAR
Trigger: GCGGGCCACGTGGCTGGCTCAAGTCCTACCACTGGA...ATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTGAGCATGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGGAAGAGCCCACGGAGTaGCCCCTGACGGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLEEPTE*PLTGRA
Trigger: GGCCCTCCCCGTCAGGGGTCACTCCGTGGGCTCTTC...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCTTGGAGGTGCGAAGCTaGACAGTGTCCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPLEVRS*TVSWGS
Trigger: GCTCCCCCAGGACACTGTGCAGCTTCGCACCTCCAA...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGCCTCCTGCAGCTCCTaGAGGGTGATGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPASCSS*RVMVPL
Trigger: AAGTGGCACCATCACCCTCCAGGAGCTGCAGGAGGC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTGCAGAGGTCCCGGTGCGCGCTaGCCGCCAGCCCGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: VKGHLQANGLHVILAQCRGPGAR*PPARRA
Trigger: TGCTCTTCGGGCTGGCGGCCAGCGCGCACCGGGACC...TCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCCCCACAGTATGTGCTaGGAGAGCCTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPPHSMC*ESLCCL
Trigger: GAGGCAGCAAAGGCTCTCTCAGCACATACTGTGGGG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCACAGACAGTGTGCCCTaGGGCATCTCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPTDSVP*GISTPR
Trigger: CCTGGGAGTTGAGATGCCTCAGGGCACACTGTCTGT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGACTCCGGGGAAGCGCTaGAGCTCGTCCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLTPGKR*SSSRSS
Trigger: GGAGCTCCGGGACGAGCTGCAGCGCTTCCCCGGAGT...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGAGCAGACCCATGGTGTaGACTTGGGGCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGESRPMV*TWGRAW
Trigger: CCAAGCTCTGCCCCAAGTCCACACCATGGGTCTGCT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCGGGTGGGAGCCTGGTaGAAATCTGTTACGAGAGGG +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGERVGAW*KSVTRG
Trigger: CCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGCAGTGTGTGGAGGATaGATCAGAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPAVCGG*IRARLE
Trigger: CTCCAGCCTGGCTCTGATCCATCCTCCACACACTGC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGAGCTCCTCGAAGGTaGTGGCCCCGTTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPGAPRR*WPRCRP
Trigger: CGGACGGCAACGGGGCCATCACCTTCGAGGAGCTCC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTGGAGCTCCTCGAAGGTaGTGGCCCCGTTGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSGAPRR*WPRCRP
Trigger: CGGACGGCAACGGGGCCATCACCTTCGAGGAGCTCC...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCAGTGGTAGGACTTaGGCCAGCCACGTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSSGRT*ASHVAR
Trigger: GCGGGCCACGTGGCTGGCTCAAGTCCTACCACTGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCCTGTTGATGGCCGATaGTGCCCATCTGCACATCTG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPPVDGR*CPSAHL
Trigger: CAGATGTGCAGATGGGCATCATCGGCCATCAACAGG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCCCACGGAGTGACCCCTaGCGGGGAGGGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTPRSDP*RGGPVP
Trigger: GGGGACTGGCCCTCCCCGTCAGGGGTCACTCCGTGG...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGGCTTGATGATTGGCTaGAGGAGGAAGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPGLMIG*RRKMGE
Trigger: CTCCCCCATCTTCCTCCTTCAGCCAATCATCAAGCC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGCCCAGTGCGGGCCTaGCCCAGCACCCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPSPVRA*PSTPLC
Trigger: ACAGAGTGGGGTGCTGGGGCAGGCCCGCACTGGGCT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCTGGGTGCGCGTCTaGAGCCCCGTGATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVGWVRV*SPVMES
Trigger: AGACTCCATCACGGGGCTGCAGACGCGCACCCAGCC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCCTATCAGGACTGACTaGAAGGTGGAGGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGEPIRTD*KVEDAQ
Trigger: CTGGGCATCCTCCACCTTGCAGTCAGTCCTGATAGG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCCCACCGGAGCCACCTaGCATCCTCCTCGGCACTCA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRPTGAT*HPPRHS
Trigger: TGAGTGCCGAGGAGGATGCCAGGTGGCTCCGGTGGG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCCCACCGGAGCCACCTaGCATCCTCCTCGGCACTCA +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVPTGAT*HPPRHS
Trigger: TGAGTGCCGAGGAGGATGCCAGGTGGCTCCGGTGGG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp TCTGGTTGGAAGGCCCCAACACCAGGTCTCCTGGCCTaGCTGACTCCCAGTCCAGGGAGATGGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGWKAPTPGLLA*LTPSPGRWRLG
Trigger: ACCAAGCCTCCATCTCCCTGGACTGGGAGTCAGCAAGGCCAGGAGACCTGGTGTTGGGGCCTTCCAACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCCTGGAAGAGGAATTTaGGTTTGTCCATGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGEPGRGI*VCPWGC
Trigger: GCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTCCAGTGGTAGGACTTaGGCCAGCCACGTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSSSGRT*ASHVAR
Trigger: GCGGGCCACGTGGCTGGCTCAAGTCCTACCACTGGA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGGGCTGGCCTCCGCCTaGGCCTGGAGTACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWGLASA*AWSTKF
Trigger: GAACTTTGTACTCCAGGCTCAGGCGGAGGCCAGCCC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGGAAGCGGCCGTATTaGGCCTCCTCGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPRKRPY*ASSAWS
Trigger: GGACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTGGCGTCTGCAGCCCCGTaGTGGAGTCTTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGWVRVCSPVMESFFSLLASAAP*WSLSSP
Trigger: AGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGC...CAACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTCGCGCAGACACGACTaGAGCACAGTGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGSRRHD*STVRSS
Trigger: TGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGTGATGCCGATGCCTaGCCCGATGAGCACGGCATG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVGDADA*PDEHGM
Trigger: CATGCCGTGCTCATCGGGGCAGGCATCGGCATCACC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGATGTCATGTACATATaGAGCTCCAGGAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPDVMYI*SSRKRP
Trigger: CGGCCGCTTCCTGGAGCTGCATATGTACATGACATC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTCTGCTGTTCCCTCCTaGCCAGACAGGGACAGACGC +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGSAVPS*PDRDRR
Trigger: GCGTCTGTCCCTGTCTGGGCAGGAGGGAACAGCAGA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCCCCTTCCCAGGGCCTaGCTCAGCGTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPPLPRA*LSVFLH
Trigger: GTGGAGGAAGACGCTGAGGCAGGCCCTGGGAAGGGG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCTGGTCATTTCAGGAATaGCTGCTGTCTCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPWSFQE*LLSPSA
Trigger: CGCTGACGGAGACAGCAGGCATTCCTGAAATGACCA...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGGGTGACTCTCCATGTTaGCCATGCCCCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWGDSPC*PCPLPS
Trigger: GGAGGGGAGGGGGCATGGGCAACATGGAGAGTCACC...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCACAATTTCACGTGTATaGCCACGGCCTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPTISRV*PRPPQS
Trigger: GGACTGTGGAGGCCGTGGGCATACACGTGAAATTGT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGGCCTCCTGCAGCTCCTaGAGGGTGATGGTGCCACTT +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGASCSS*RVMVPL
Trigger: AAGTGGCACCATCACCCTCCAGGAGCTGCAGGAGGC...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GGCATGCTCAGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATCAAAGATCCTGCGGGTaGGGGTCCCATAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GMLRGKDPAGGGPIRPIDQRSCG*GSHKAH
Trigger: ATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTG...ATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTGAGCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGGCAGGTTTGGGACCATaGATGTGGGGGAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGAGLGP*MWGKAP
Trigger: CGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGC...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCATGCGGGTGGGAGCCTaGTGGAAATCTGTTACGAGA +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPMRVGA*WKSVTR
Trigger: TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCAT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp TCCCATCCTGCTCTGTCCCAGTCCTCAGGGTATGTTTaGCCTTCCCCTTCCCAGGGCCTGCCTCAGCGTCTT +
Preference number: 4 (lower is better)
Translates to: SHPALSQSSGYV*PSPSQGLPQRL
Trigger: AAGACGCTGAGGCAGGCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGGACTGGGACAGAGCAGGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp CACGGACCAGTCTCACTTCCTGGGAAACAAACCCGCTaGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: HGPVSLPGKQTR*RSVILQRPLVG
Trigger: GCCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGTCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTGTCCCGAGTGGGGATaGAGCCCAGTGCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTCPEWG*SPVRAC
Trigger: GCAGGCCCGCACTGGGCTTCATCCCCACTCGGGACA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTGGTCAGGTTCTCCATaGCTCCGGGGAAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRWSGSP*LRGSAA
Trigger: TGCAGCGCTTCCCCGGAGTCATGGAGAACCTGACCA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCGCTTGATGAGGAGATaGGTGACCTTGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGRLMRR*VTLEGR
Trigger: CCTCCCCTCCAAGGTCACTCATCTCCTCATCAAGCG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCATTCTTGCCCAGTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGAGGAAGCGGCCGTATTaGGCCTCCTCGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SFLPSADVMYICSSRKRPRKRPY*ASSAWS
Trigger: GGACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCT...CGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGAACCTGGACCTGTaGACTCTCCCCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQNLDL*TLPKPG
Trigger: GCCTGGCTTGGGGAGAGTTCACAGGTCCAGGTTCTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCAGAACCTGGACCTGTaGACTCTCCCCAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVQNLDL*TLPKPG
Trigger: GCCTGGCTTGGGGAGAGTTCACAGGTCCAGGTTCTG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCTCCGAAGTCTCAATCTaGAAGTGGAGAAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSEVSI*KWRRVL
Trigger: GAGCACCCTTCTCCACTTTCAGATTGAGACTTCGGA...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCAGATACAACATGACTaGATACCAGCCTGGGCGCAA +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPQIQHD*IPAWAQ
Trigger: TTGCGCCCAGGCTGGTATGCAGTCATGTTGTATCTG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260364.9
CDS-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGAGGGTCAGTGCCTCCTaGAGCTCCTGGAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRRVSAS*SSWRVM
Trigger: CATCACCCTCCAGGAGCTGCAGGAGGCACTGACCCT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGGTCAATGGAGCCACTaGCTGTCCCGAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWGQWSH*LSRVGM
Trigger: CATCCCCACTCGGGACAGGCAGTGGCTCCATTGACC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTGCCATGCGGGACACTaGCAGTCCGATGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFCHAGH*QSDGLL
Trigger: GAGAAGGCCATCGGACTGGCAGTGTCCCGCATGGCA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTGCACACGGCTGCCATaGGGGACACTGCCAGTCCGA +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSCTRLP*GTLPVR
Trigger: TCGGACTGGCAGTGTCCCGCATGGCAGCCGTGTGCA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCCTTGGGACCGAATGTaGAGCCAGATAGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGEPWDRM*SQIVSF
Trigger: GAAAGACACTATCTGGCTGCACATTCGGTCCCAAGG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TCGGCCTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACGGCTGGGTGCGCGTCTaGAGCCCCGTGATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SAWSISSLVSRLTNHSKDGWVRV*SPVMES
Trigger: AGACTCCATCACGGGGCTGCAGACGCGCACCCAGCC...GTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAGGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGGAGTGGTTGCCCTCTaGCCCCTCGAACCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTGVVAL*PLEPHP
Trigger: GGGGTGGGGTTCGAGGGGGCAGAGGGCAACCACTCC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCTGCTGTTCCCTCCTaGCCAGACAGGGACAGACGC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSAVPS*PDRDRR
Trigger: GCGTCTGTCCCTGTCTGGGCAGGAGGGAACAGCAGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCCATCCCCTTCCTATTaGCCCTTTCAGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGEPSPSY*PFQKRA
Trigger: AGCTCTCTTCTGAAAGGGGCAATAGGAAGGGGATGG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAGCCAGTCATCCGGATaGATTTTCCTGTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSQSSG*IFLLMA
Trigger: GGCCATCAACAGGAAAATGCATCCGGATGACTGGCT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTTGGAGGTGCGAAGCTaGACAGTGTCCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWLEVRS*TVSWGS
Trigger: GCTCCCCCAGGACACTGTGCAGCTTCGCACCTCCAA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGCTCATCCGGGTCAATaGAGCCACTGCCTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRAHPGQ*SHCLSR
Trigger: TCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGGTCCCGGTGCGCGCTaGCCGCCAGCCCGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAGPGAR*PPARRA
Trigger: TGCTCTTCGGGCTGGCGGCCAGCGCGCACCGGGACC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATGTAGCACTTGATGTTACATCGAAGTTGAGGCACTaGCCGCAGCCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: DPAGGGPIRPIDVALDVTSKLRH*PQPLAT
Trigger: GGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGA...TGTAACATCAAGTGCTACATCGATGGGCCTTATGGGACCCCCACCCGCAGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTAGGGAGATGGAGGCTTaGTGCAAGCACGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSREMEA*CKHEPR
Trigger: GCGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCT...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGGTGTCTCCAACAGGTTaGCCCAGAGCCAGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLVSPTG*PRASLG
Trigger: GCCGAGACTGGCTCTGGGCCAACCTGTTGGAGACAC...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGAACTGCTTAGCATTTaGGCATCATCGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPELLSI*ASSAIS
Trigger: GCTGATGGCCGATGATGCCCAAATGCTAAGCAGTTC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTTAGGGCAGCCCTTTTaGGGCCATGGCTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVLGQPF*GHGWVA
Trigger: AGCCACCCAGCCATGGCCCCAAAAGGGCTGCCCTAA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCTGTTTATTCTGCGATaGGAGGGACCAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGELFILR*EGPARK
Trigger: CTTCCTTGCTGGTCCCTCCCATCGCAGAATAAACAG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCAGGGCCCGTCTGGGCTaGGTCTCCAGATGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGRARLG*VSRCVH
Trigger: ATGAACACATCTGGAGACCCAGCCCAGACGGGCCCT...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388866.8
CDS-3UTR TCA 90 bp CTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGAGCTGCAGTCGAAGTTaGGGCACTGGCCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LVHLQFSQQAHKPLERPLSCSRS*GTGRSP
Trigger: AGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCT...CAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp CACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTGGGCTGGCCTCCGCCTaGGCCTGGAGTACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: HLRSRSAGSWGKYAFFSGGLASA*AWSTKF
Trigger: GAACTTTGTACTCCAGGCTCAGGCGGAGGCCAGCCC...ACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGACGGCCCAGTGGGTCTaGTGCCTTGAAGGACTCATA +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGTAQWV*CLEGLI
Trigger: TATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTGGAAGCAAAGGGGGTaGTGCCGATGCCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWWKQRG*CRCLPR
Trigger: TCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGTCTGGTGCCTGTACATaGTACTCTGCAGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGESGACT*YSAEWK
Trigger: CTTCCATTCTGCAGAGTATCATGTACAGGCACCAGA...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGGCGTCTGCAGCCCCGTaGTGGAGTCTTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWASAAP*WSLSSP
Trigger: AGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGC...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTGTCTGCCAGCCTGGTaGCTCTCCATGTTGCCCATG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWCLPAW*LSMLPM
Trigger: CATGGGCAACATGGAGAGTCACCAGGCTGGCAGACA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGAAGAGCCCACGGAGTaGCCCCTGACGGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTREEPTE*PLTGRA
Trigger: GGCCCTCCCCGTCAGGGGTCACTCCGTGGGCTCTTC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGACAGACAGTGTGCCCTaGGGCATCTCAACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWTDSVP*GISTPR
Trigger: CCTGGGAGTTGAGATGCCTCAGGGCACACTGTCTGT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGGGCCCATTTGTCCCTaGGTAGTATTAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFGPICP*VVLGQP
Trigger: GGGCTGCCCTAATACTACTCAGGGACAAATGGGCCC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCACCCCACTCTGTACCTaGAGACGCCCCCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTTPLCT*RRPLPC
Trigger: GCACGGCAGGGGGCGTCTGCAGGTACAGAGTGGGGT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCATGATGCACACGGCTaGCATGCGGGACACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSHDAHG*HAGHCQ
Trigger: CTGGCAGTGTCCCGCATGGCAGCCGTGTGCATCATG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCTTCGATCCAGGAGTaGTGGCAGCTGGGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPSIQE*WQLGQV
Trigger: TACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCCTTCGATCCAGGAGTaGTGGCAGCTGGGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWPSIQE*WQLGQV
Trigger: TACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCTTTCTGGAACACCTTaGTCCAGTCAGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWLSGTP*SSQAAQ
Trigger: CTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAGCCTTGGGGAAGGGTaGTTTACACTGTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSLGEG*FTLSRR
Trigger: TCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCCTCAGGGTATGTTTTaGCTTCCCCTTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWPQGMF*LPLPRA
Trigger: GGCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCTCACTCCCATCCTaGTCTGTCCCAGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSSLPS*SVPVLR
Trigger: CCTGAGGACTGGGACAGAGCAGGATGGGAGTGAGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTCCTCACTCCCATCCTaGTCTGTCCCAGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWSSLPS*SVPVLR
Trigger: CCTGAGGACTGGGACAGAGCAGGATGGGAGTGAGGA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGCGGCAGTGAGAAGCTaGCAGCTAGAGAAACTGACC +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGAAVRS*QLEKLT
Trigger: GGTCAGTTTCTCTAGCTGGCAGCTTCTCACTGCCGC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCGTCCAGGAGGGCCCTaGCTGATTGGTCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWRPGGP*LIGHFR
Trigger: CCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTAATAGCCTGCACTTGTaGCGCTCGTCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSNSLHL*RSSRRA
Trigger: GGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATT...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTCCATGGGGCTGCCATaGATGAGCAGGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSSMGLP*MSRVSA
Trigger: GGCACTGACCCTGCTCATCCATGGCAGCCCCATGGA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGTATTGAGCCTCCTGCCAGGCAGAACAGCTaGCTGCGGTGGTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: VQMSCTYAAPGSGRIEPPARQNS*LRWLCQ
Trigger: CTGGCACAACCACCGCAGCCAGCTGTTCTGCCTGGC...AGGAGGCTCAATACGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTCGAAGTTGAGGCACTaGCCGCAGCCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWSKLRH*PQPLAT
Trigger: GGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTCGATCCAGGAGTGCTaGCAGCTGGGGCAAGTATGC +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRSIQEC*QLGQVC
Trigger: GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCTTCATGTTGTCTTaGACACCTTCGATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TFWNTLLQSGRPGWVRVCSFMLS*TPSIQE
Trigger: CTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCT...GCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCACTCGAAAGACCGCTaGTCTCTGTTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGEHSKDR*SLLIQI
Trigger: TATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTTGGGACCATGGATGTaGGGGAAGGCTCCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRLGPWM*GKAPSE
Trigger: TTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCCCAGTCCAGGGAGATaGAGGCTTGGTGCAAGCACG +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSPSPGR*RLGAST
Trigger: CGTGCTTGCACCAAGCCTCCATCTCCCTGGACTGGG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGTTGACTTCACAGAGATaGAGCCTGGAGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGELTSQR*SLEVLP
Trigger: AGGCAAAACCTCCAGGCTCCATCTCTGTGAAGTCAA...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGAGTAACCCCTTGCCCTaGGAGGAACCGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGSNPLP*EEPTSG
Trigger: ACCAGATGTCGGTTCCTCCCAGGGCAAGGGGTTACT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGCAGTGTGTGGAGGATaGATCAGAGCCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFAVCGG*IRARLE
Trigger: CTCCAGCCTGGCTCTGATCCATCCTCCACACACTGC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp GAGCTTCCAGGCTTAGCCCGCTTCATCCCCAGGCACTaGGCCTTTCCACGACAGAGAGAGGCACACAAAGAG +
Preference number: 4 (lower is better)
Translates to: ELPGLARFIPRH*AFPRQREAHKE
Trigger: CTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGAAGCGGGCTAAGCCTGGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCCTGGAAGAGGAATTTaGGTTTGTCCATGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGPGRGI*VCPWGC
Trigger: GCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGACAAAGTTCACAGTGTaGGCCACGGTGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWTKFTV*ATVCTR
Trigger: CCTCGTGCACACCGTGGCTCACACTGTGAACTTTGT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCTTCTCCTTGTTGGCCAGGAGGTCAAGGGCCATCTGCAGGCCAATGGCCTTCAACAAAGTTCACAGTGTaGGCCACGGTGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: SSPCWPGGQGPSAGQWPSTKFTV*ATVCTR
Trigger: CCTCGTGCACACCGTGGCTCACACTGTGAACTTTGT...TGAAGGCCATTGGCCTGCAGATGGCCCTTGACCTCCTGGCCAACAAGGAGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCAGAAGTTGGGCCCATaGAAGATGAGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGQKLGP*KMSRSH
Trigger: GTGGCTTCTGCTCATCTTTCATGGGCCCAACTTCTG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATGTAGCACTTACGGCCCAGTGGGTCTaGTGCCTTGAAGGACTCATA +
Preference number: 4 (lower is better)
Translates to: RGKDPAGGGPIRPIDVALTAQWV*CLEGLI
Trigger: TATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGT...AAGTGCTACATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGTCCTGTTCTCTCTGTTaGGCAGGATTAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLSCSLC*AGLGGP
Trigger: GGGACCCCCTAATCCTGCTCAACAGAGAGAACAGGA...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCTGTTCTCTCTGTTaGGCAGGATTAGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSCSLC*AGLGGP
Trigger: GGGACCCCCTAATCCTGCTCAACAGAGAGAACAGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCAGCCAGAGTGTGGCTaGGCTGAGCTTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPQPECG*AELPGL
Trigger: TAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCCTGTTGATGGCCGATaGTGCCCATCTGCACATCTG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWPVDGR*CPSAHL
Trigger: CAGATGTGCAGATGGGCATCATCGGCCATCAACAGG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTGTCTGCCAGCCTGGTaGCTCTCCATGTTGCCCATG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPCLPAW*LSMLPM
Trigger: CATGGGCAACATGGAGAGTCACCAGGCTGGCAGACA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGGCTTGATGATTGGCTaGAGGAGGAAGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWGLMIG*RRKMGE
Trigger: CTCCCCCATCTTCCTCCTTCAGCCAATCATCAAGCC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGAGGCAATTTAAGGACTaGACCAAGGCAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGRQFKD*TKAGPV
Trigger: CACTGGCCCTGCCTTGGTTCAGTCCTTAAATTGCCT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCGGCAAAGAATCGCTCTaGAAAGAAGGACTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPGKESL*KEGLFH
Trigger: GTGAAAGAGTCCTTCTTTGCAGAGCGATTCTTTGCC...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGGATGAGCAGGGTCAGTaGCTCCTGCAGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWDEQGQ*LLQLLE
Trigger: CTCCAGGAGCTGCAGGAGGCACTGACCCTGCTCATC...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAAGCCCAGTGCGGGCCTaGCCCAGCACCCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISSPVRA*PSTPLC
Trigger: ACAGAGTGGGGTGCTGGGGCAGGCCCGCACTGGGCT...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCAAAGTGGCCACTCCTaGGGATGCAGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPQSGHS*GCRNWS
Trigger: GCTCCAGTTCCTGCATCCGCAGGAGTGGCCACTTTG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGTGCCATGCGGGACACTaGCAGTCCGATGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LVHLQFSQQAHKPLERPLCHAGH*QSDGLL
Trigger: GAGAAGGCCATCGGACTGGCAGTGTCCCGCATGGCA...CAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGCATGATGCACACGGCTaGCATGCGGGACACTGCCAG +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWHDAHG*HAGHCQ
Trigger: CTGGCAGTGTCCCGCATGGCAGCCGTGTGCATCATG...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGCATGATGCACACGGCTaGCATGCGGGACACTGCCAG +
Preference number: 4 (lower is better)
Translates to: LVHLQFSQQAHKPLERPLHDAHG*HAGHCQ
Trigger: CTGGCAGTGTCCCGCATGGCAGCCGTGTGCATCATG...CAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCCGATGAGCACGGCATaGTCAGAGGCAAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFPMSTA*SEAKIL
Trigger: CAGGATCTTTGCCTCTGAGCATGCCGTGCTCATCGG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCTGTACATGATACTCTaGAGAATGGAAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPLYMIL*RMEAKG
Trigger: CCCCTTTGCTTCCATTCTGCAGAGTATCATGTACAG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCCTGTACATGATACTCTaGAGAATGGAAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TFWNTLLQSGRPGWVRVCLYMIL*RMEAKG
Trigger: CCCCTTTGCTTCCATTCTGCAGAGTATCATGTACAG...GCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCTTTCTGGAACACCTTaGTCCAGTCAGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLSGTP*SSQAAQ
Trigger: CTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATGTTGTCTTGGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCCTTTCTGGAACACCTTaGTCCAGTCAGGCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: MLSWTPSIQECWQLGQVCLSGTP*SSQAAQ
Trigger: CTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAG...GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGGAGTGGTTGCCCTCTaGCCCCTCGAACCCCACCCC +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAGVVAL*PLEPHP
Trigger: GGGGTGGGGTTCGAGGGGGCAGAGGGCAACCACTCC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGGTTTGGAGGAGTGGTTaGCCTCTGCCCCCTCGAACC +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAVWRSG*PLPPRT
Trigger: GGTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAAC...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCCTCAGGGTATGTTTTaGCTTCCCCTTCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPPQGMF*LPLPRA
Trigger: GGCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGAGATGGAGGCTTGGTaGAAGCACGAGCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPEMEAW*KHEPRF
Trigger: AAAGCGGGGCTCGTGCTTGCACCAAGCCTCCATCTC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGGCAAAGGCTTGGAGGTaGGAAGCTGCACAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWAKAWR*EAAQCP
Trigger: AGGACACTGTGCAGCTTCGCACCTCCAAGCCTTTGC...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTTTGTCCACTGGCCTTaGGACCGAATGTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFFVHWP*DRMCSQ
Trigger: CTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTTTGTCCACTGGCCTTaGGACCGAATGTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWFVHWP*DRMCSQ
Trigger: CTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATGTAGCACTTTTTGTCCACTGGCCTTaGGACCGAATGTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGKDPAGGGPIRPIDVALFVHWP*DRMCSQ
Trigger: CTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAA...AAGTGCTACATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCTTTCTTCTCCTTGTTaGCCAGGAGGTCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGLSSPC*PGGQGP
Trigger: TGGCCCTTGACCTCCTGGCCAACAAGGAGAAGAAAG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGAAATGTTTGGAGGAGTaGTTGCCCTCTGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLKCLEE*LPSAPS
Trigger: CGAGGGGGCAGAGGGCAACCACTCCTCCAAACATTT...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCCGTCGGAAAATGTTTaGAGGAGTGGTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGPSENV*RSGCPL
Trigger: CAGAGGGCAACCACTCCTCCAAACATTTTCCGACGG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGATGCCCAGGAAATGTaGGGCTCACAGGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWDAQEM*GSQELM
Trigger: CATGAGCTCCTGTGAGCCCCACATTTCCTGGGCATC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTTCCATCCACCCAACTaGCTCATCCCCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWFHPPN*LIPCRS
Trigger: TGACCTGCAGGGGATGAGCCAGTTGGGTGGATGGAA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCAGGGAGATGGAGGCTTaGTGCAAGCACGAGCCCCGC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTREMEA*CKHEPR
Trigger: GCGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGCGGTGTAGACAGAGATaGGAAAGAATCCAAAACGGT +
Preference number: 4 (lower is better)
Translates to: YRAQRGSEGRARREGDGERCRQR*ERIQNG
Trigger: ACCGTTTTGGATTCTTTCCCATCTCTGTCTACACCG...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGGACACGGGCATATaGTCGTCACACATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQDTGI*SSHMWA
Trigger: TGCCCACATGTGTGACGACCATATGCCCGTGTCCTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCAGGACACGGGCATATaGTCGTCACACATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVQDTGI*SSHMWA
Trigger: TGCCCACATGTGTGACGACCATATGCCCGTGTCCTG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGGAGGCAGACAGAACCTaGACCTGTGAACTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWEADRT*TCELSP
Trigger: TGGGGAGAGTTCACAGGTCCAGGTTCTGTCTGCCTC...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGAGGCAGACAGAACCTaGACCTGTGAACTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDREADRT*TCELSP
Trigger: TGGGGAGAGTTCACAGGTCCAGGTTCTGTCTGCCTC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGAGTTTGCAGCTTCATaGGGGAGGATGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFEFAAS*GRMGTR
Trigger: ACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCTCTGTGCTAGGCTTTaGGTCCCCATGTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWLCARL*VPMSGL
Trigger: AAGGCCAGACATGGGGACCCAAAGCCTAGCACAGAG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGAGTAACCCCTTGCCCTaGGAGGAACCGACATCTGGT +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSNPLP*EEPTSG
Trigger: ACCAGATGTCGGTTCCTCCCAGGGCAAGGGGTTACT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGTGCAATGGCACCTaGCAAAGTGGTTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQCNGT*QSGSVG
Trigger: GCCCACTGAACCACTTTGCCAGGTGCCATTGCACTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCAGTGCAATGGCACCTaGCAAAGTGGTTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVQCNGT*QSGSVG
Trigger: GCCCACTGAACCACTTTGCCAGGTGCCATTGCACTG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGCCAAGGGTACCTCATaGGGTCACCAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVAKGTS*GHQLKQ
Trigger: CTGTTTCAGCTGGTGACCCCATGAGGTACCCTTGGC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGACCCACAGCAGTGTGTaGAGGATGGATCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVTHSSV*RMDQSQ
Trigger: CTGGCTCTGATCCATCCTCCACACACTGCTGTGGGT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAGCCCTTGGCCACCATaGCGCTGGCGCCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSPWPP*RWRRGP
Trigger: GGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGGCT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGTGGGTCTGATGCCTTaGAGGACTCATACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWVGLMP*RTHTAC
Trigger: ACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCAC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp GGCATGCTCAGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATTCTGGTGCCTGTACATaGTACTCTGCAGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: GMLRGKDPAGGGPIRPIDSGACT*YSAEWK
Trigger: CTTCCATTCTGCAGAGTATCATGTACAGGCACCAGA...ATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTGAGCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCAGGAAGCGGCCGTATTaGGCCTCCTCGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDARKRPY*ASSAWS
Trigger: GGACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGGAATCTACAGCAGACTaGACAAGGCACTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGESTAD*TRHCPF
Trigger: GAAGGGACAGTGCCTTGTTCAGTCTGCTGTAGATTC...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAAGCCCAGAGAGGCTCTaGGGGACGCGCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRSPERL*GTRQER
Trigger: TCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGAGAACCTATCAGGACTaGCTGCAAGGTGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWRTYQD*LQGGGC
Trigger: GCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGAGAACCTATCAGGACTaGCTGCAAGGTGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVRTYQD*LQGGGC
Trigger: GCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGTCTCCTGGCCTTGCTaGCTCCCAGTCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTVSWPC*LPVQGD
Trigger: ATCTCCCTGGACTGGGAGTCAGCAAGGCCAGGAGAC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGGAGAGGGCAAAGGACTaGGGGCAGGGCTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWERAKD*GQGSNV
Trigger: CACATTTGAGCCCTGCCCTCAGTCCTTTGCCCTCTC...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGCAGCCCCTTTCCCTTTaGTTAACTGCCACTCACGGA +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLQPLSL*LTATHG
Trigger: TCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTG...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGTCCTGCTGCCTTCGATaGCATGTCCACCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAASCCLR*HVHRGR
Trigger: TCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGA...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCTTTCACATGCAGAGCTaGTTTGAATTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPFHMQS*FEFLQA
Trigger: AGCCTGCAAGAATTCAAAGCAGCTCTGCATGTGAAA...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGTATTGAGCCTCCTCAAAGTGGCCACTCCTaGGGATGCAGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VQMSCTYAAPGSGRIEPPQSGHS*GCRNWS
Trigger: GCTCCAGTTCCTGCATCCGCAGGAGTGGCCACTTTG...AGGAGGCTCAATACGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCAGAGGCAAAGATCCTaGGGGTGGGGGTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAQRQRS*GWGSHK
Trigger: CTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCTGCTTTCTTTTCTGGTaGCTGTACATGATACTCTGC +
Preference number: 4 (lower is better)
Translates to: TFWNTLLQSGRPGWVRVCCFLFW*LYMILC
Trigger: GCAGAGTATCATGTACAGGCACCAGAAAAGAAAGCA...GCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp TCGGCCTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCCTTCGATCCAGGAGTaGTGGCAGCTGGGGCAAGTA +
Preference number: 4 (lower is better)
Translates to: SAWSISSLVSRLTNHSKDPSIQE*WQLGQV
Trigger: TACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGG...GTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAGGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGGCTGGGTGCGCGTCTaGAGCCCCGTGATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRGWVRV*SPVMES
Trigger: AGACTCCATCACGGGGCTGCAGACGCGCACCCAGCC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCCATCCCCTTCCTATTaGCCCTTTCAGAAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGPSPSY*PFQKRA
Trigger: AGCTCTCTTCTGAAAGGGGCAATAGGAAGGGGATGG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTGGCCTTGGGGAGTTTaGAGCTTCATGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSWPWGV*SFMGED
Trigger: ATCCTCCCCCATGAAGCTGCAAACTCCCCAAGGCCA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGTGGTCATTTCAGGAATaGCTGCTGTCTCCGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLWSFQE*LLSPSA
Trigger: CGCTGACGGAGACAGCAGGCATTCCTGAAATGACCA...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCAATAGCCTGCACTTGTaGCGCTCGTCCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTNSLHL*RSSRRA
Trigger: GGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGACCTTCAACCTTGTCTaGCAGCCTGGTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRTFNLV*QPGDSP
Trigger: TGGAGAGTCACCAGGCTGGCAGACAAGGTTGAAGGT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGACCTTCAACCTTGTCTaGCAGCCTGGTGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWTFNLV*QPGDSP
Trigger: TGGAGAGTCACCAGGCTGGCAGACAAGGTTGAAGGT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTGCAGAAGCCTGTTTGTCCACTaGCCTTGGGACCGAATGTGC +
Preference number: 4 (lower is better)
Translates to: VKGHLQANGLHVILAQCRSLFVH*PWDRMC
Trigger: GCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCT...TCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp CCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCTCCTTGTTGGTATCTCAGAGCCCTTaGACGACCTTTGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGWVRVCSPVMESFFSLLVSQSP*TTFDSF
Trigger: GAAAGAGTCAAAGGTCGTCCAAGGGCTCTGAGATAC...CAACAAGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTCGATCCAGGAGTGCTaGCAGCTGGGGCAAGTATGC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWSIQEC*QLGQVC
Trigger: GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGTCAGCAGCCACTTTCTaGAACACCTTGCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGSAATF*NTLLQS
Trigger: TGACTGGAGCAAGGTGTTCCAGAAAGTGGCTGCTGA...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCCGAACTTCTCACAATaGCCCTTCAGCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPPNFSQ*PFSTLA
Trigger: GGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGAATGAAGCAGACCCATaGTGTGGACTTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVNEADP*CGLGAE
Trigger: CTCTGCCCCAAGTCCACACCATGGGTCTGCTTCATT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGAATGAAGCAGACCCATaGTGTGGACTTGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLNEADP*CGLGAE
Trigger: CTCTGCCCCAAGTCCACACCATGGGTCTGCTTCATT...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGCAGGTTTGGGACCATaGATGTGGGGGAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTAGLGP*MWGKAP
Trigger: CGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGGCTCACAGGAGCTCATaGTGTGGCACAGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGAHRSS*CGTDGN
Trigger: ATTTCCATCTGTGCCACACCATGAGCTCCTGTGAGC...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGCCATTGGAAAGTGCCTaGTTCCAACCCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLPLESA*FQPHDG
Trigger: GCCATCATGGGGTTGGAACCAGGCACTTTCCAATGG...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCTAGTGGGGAGCTTTaGAACAGGGCGTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSSGEL*NRALSS
Trigger: GGAAGACAACGCCCTGTTCCAAAGCTCCCCACTAGA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGGAAAGCCCAGAACTaGACACTGGGTATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPRKAQN*TLGMGR
Trigger: CCTCCCCATACCCAGTGTCCAGTTCTGGGCTTTCCT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCCCCATGTCTGGCCTTaGGGAGTTTGCAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPPHVWP*GVCSFM
Trigger: CATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCTCTGTGCTAGGCTTTaGGTCCCCATGTCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSLCARL*VPMSGL
Trigger: AAGGCCAGACATGGGGACCCAAAGCCTAGCACAGAG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGAGGGCCCTGCCTGATTaGTCATTTCAGGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWRALPD*SFQECL
Trigger: CAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGAAGACCAGTTAGCTaGGTGGTCTTCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVGRPVS*VVFQAS
Trigger: GGAAGCTTGGAAGACCACCCAGCTAACTGGTCTTCC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCGGAAGACCAGTTAGCTaGGTGGTCTTCCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFGRPVS*VVFQAS
Trigger: GGAAGCTTGGAAGACCACCCAGCTAACTGGTCTTCC...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGATGGTCTTAAACTGCTaGGTCACCCACCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAMVLNC*VTHRSH
Trigger: GTGGCTCCGGTGGGTGACTCAGCAGTTTAAGACCAT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGACAAAGTTCACAGTGTaGGCCACGGTGTGCACGAGG +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAATKFTV*ATVCTR
Trigger: CCTCGTGCACACCGTGGCTCACACTGTGAACTTTGT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAGAGGGAGGAGGAACTaGTGGATAATATGTGATAAA +
Preference number: 4 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPRGRRN*WIICDK
Trigger: TTTATCACATATTATCCATCAGTTCCTCCTCCCTCT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGCCCAGAGAGGCTCTaGGGGACGCGCCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPSPERL*GTRQER
Trigger: TCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTGTGAGTTTCCCTGGTaGGTTGTGTGCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTCEFPW*VVCLPR
Trigger: CCTGGGGAGGCACACAACTCACCAGGGAAACTCACA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGAGAGGGCAAAGGACTaGGGGCAGGGCTCAAATGTG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTERAKD*GQGSNV
Trigger: CACATTTGAGCCCTGCCCTCAGTCCTTTGCCCTCTC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCCTTGGGACCGAATGTaGAGCCAGATAGTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFPWDRM*SQIVSF
Trigger: GAAAGACACTATCTGGCTGCACATTCGGTCCCAAGG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCAGCTGGGGCAAGTATaGTTTCTTTTCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWQLGQV*FLFWCL
Trigger: CAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATGTAGCACTTGATGTTACAGATGTCATGTACATATaGAGCTCCAGGAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: DPAGGGPIRPIDVALDVTDVMYI*SSRKRP
Trigger: CGGCCGCTTCCTGGAGCTGCATATGTACATGACATC...TGTAACATCAAGTGCTACATCGATGGGCCTTATGGGACCCCCACCCGCAGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCACACCCACCCCTACTaGTGCATCCCAGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAHTHPY*CIPAPP
Trigger: AGGTGGGGCTGGGATGCAGCAGTAGGGGTGGGTGTG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCCCCTTCCCAGGGCCTaGCTCAGCGTCTTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIPLPRA*LSVFLH
Trigger: GTGGAGGAAGACGCTGAGGCAGGCCCTGGGAAGGGG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTGGTCAGACCATGCGTaGTGTACACTCACATGTGTG +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFWSDHA*CTLTCV
Trigger: CACACATGTGAGTGTACAGCACGCATGGTCTGACCA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGCAGATGGTCAGACCATaGGTGCTGTACACTCACATG +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLQMVRP*VLYTHM
Trigger: CATGTGAGTGTACAGCACGCATGGTCTGACCATCTG...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCCGATGATGCCCATCTaGACATCTGGGAAACATCCA +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRPMMPI*TSGKHP
Trigger: TGGATGTTTCCCAGATGTGCAGATGGGCATCATCGG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCATTTCAGGAATGCCTaGTGTCTCCGTCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSHFRNA*CLRQRC
Trigger: ACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGAAAGTGGAGAAGGGTaGTCCAAGTGTCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPESGEG*SKCQAM
Trigger: CATCGCCTGACACTTGGAGCACCCTTCTCCACTTTC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGATCGAAGTTGAGGCACTaGCCGCAGCCCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRSKLRH*PQPLAT
Trigger: GGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGA...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGACACTGCCAGTCCGATaGCCTTCTCCAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLTLPVR*PSPGKT
Trigger: TGTTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGT...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGAGCCTGTTTGTCCACTaGCCTTGGGACCGAATGTGC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWSLFVH*PWDRMC
Trigger: GCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCT...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGAGGAGTGCTGGCAGCTaGGGCAAGTATGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRRSAGS*GKYAFF
Trigger: AAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCCATCTGCAGGCCAATaGCCTTCATGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVPSAGQ*PSCHSC
Trigger: GCAAGAATGACATGAAGGCCATTGGCCTGCAGATGG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCCCCCTTTGCAACCATaGACTTCCAACCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWPPLQP*TSNPWK
Trigger: TTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCTCCCCAGGCTTGCTaGAAATTAAACACGATCTGG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPPQAC*KLNTIW
Trigger: CCAGATCGTGTTTAATTTCCAGCAAGCCTGGGGAGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCCGGGTGGGAGCCTGGTaGAAATCTGTTACGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTRVGAW*KSVTRG
Trigger: CCCTCTCGTAACAGATTTCCACCAGGCTCCCACCCG...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGACCAGTCTCACTTCCTaGGAAACAAACCCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVTSLTS*ETNPLE
Trigger: CTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGACCAGTCTCACTTCCTaGGAAACAAACCCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWTSLTS*ETNPLE
Trigger: CTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGGCCCATCTGCACATCTaGGAAACATCCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWAHLHI*ETSRWS
Trigger: TGACCATCTGGATGTTTCCCAGATGTGCAGATGGGC...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCACAGAACAGTGCAATaGCACCTGGCAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVHRTVQ*HLAKWF
Trigger: GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCAGATAAGGGCTGTCTaGGCCCAAGACAGATTAAGG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWQIRAV*AQDRLR
Trigger: CCTTAATCTGTCTTGGGCCCAGACAGCCCTTATCTG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp GTGAGTTTCCCTGGTGAGTTGTGTGCCTCCCCAGGCTaGCTGGAAATTAAACACGATCTGGTTGGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VSFPGELCASPG*LEIKHDLVGRP
Trigger: GGGCCTTCCAACCAGATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCACACAACTCACCAGGGAAACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp TTGGAACAGGGCGTTGTCTTCCCAGCCCCTTTCCCTTaGATTAACTGCCACTCACGGACCAGTCTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LEQGVVFPAPFP*INCHSRTSLTS
Trigger: GGAAGTGAGACTGGTCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGGGAAGACAACGCCCTGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp AGAGGGCAAAGGTTTGTCCACTGTGTCTCCAACAGGTaGGCCCAGAGCCAGTCTCGGCTAATGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: RGQRFVHCVSNR*AQSQSRLMFLI
Trigger: GATGAGGAACATTAGCCGAGACTGGCTCTGGGCCAACCTGTTGGAGACACAGTGGACAAACCTTTGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGCTGCAGTCGAAGTTaGGGCACTGGCCGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPSCSRS*GTGRSP
Trigger: AGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGGGCTGGCCTCCGCCTaGGCCTGGAGTACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIGLASA*AWSTKF
Trigger: GAACTTTGTACTCCAGGCTCAGGCGGAGGCCAGCCC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTGCCTGTACATCAGAAGTTGGGCCCATaGAAGATGAGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PGVLAAGASMLSFLVPVHQKLGP*KMSRSH
Trigger: GTGGCTTCTGCTCATCTTTCATGGGCCCAACTTCTG...ATGTACAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCCTTGGACGACCTTTaGCTCTTTCTCATTGTCACA +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPLDDL*LFLIVT
Trigger: TGTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGATAAAGTCCACCTTATGGAGCTTCATGTTGTCTTGGACACCTTCGATCCAGTGGAAGCAAAGGGGGTaGTGCCGATGCCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: QIKSTLWSFMLSWTPSIQWKQRG*CRCLPR
Trigger: TCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCA...CTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGTGGACTTTATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCTCAGATGGAGGAGGTaGGGCCCACCCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPLRWRR*GPPCPL
Trigger: CAGAGGACAGGGTGGGCCTCACCTCCTCCATCTGAG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTCATCATCCAGGTTATaGTCCGGCTTCTTTACCTCC +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFSSSRL*SGFFTS
Trigger: GGAGGTAAAGAAGCCGGATCATAACCTGGATGATGA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAGTCTCCTGGCCTTGCTaGCTCCCAGTCCAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISVSWPC*LPVQGD
Trigger: ATCTCCCTGGACTGGGAGTCAGCAAGGCCAGGAGAC...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGGAACATGAAGTCTCTTaGCTTCACAGAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLEHEVS*LHRDGA
Trigger: GGCTCCATCTCTGTGAAGTCAAGAGACTTCATGTTC...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGATGAGCAGGGTCAGTaGCTCCTGCAGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRDEQGQ*LLQLLE
Trigger: CTCCAGGAGCTGCAGGAGGCACTGACCCTGCTCATC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCCTGCAGACGCCCCCTaGCGTGCACACACATCGATG +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPPADAP*RAHTSM
Trigger: CATCGATGTGTGTGCACGGCAGGGGGCGTCTGCAGG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAGGTCAATGGAGCCACTaGCTGTCCCGAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISGQWSH*LSRVGM
Trigger: CATCCCCACTCGGGACAGGCAGTGGCTCCATTGACC...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTTGCACACGGCTGCCATaGGGGACACTGCCAGTCCGA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPCTRLP*GTLPVR
Trigger: TCGGACTGGCAGTGTCCCGCATGGCAGCCGTGTGCA...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCAGATAGTGTCTTTCTaGTCAGGAGCACTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFQIVSF*SGALLM
Trigger: CATCAGCAGTGCTCCTGAGCAGAAAGACACTATCTG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGGTGATGCCGATGCCTaGCCCGATGAGCACGGCATG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIGDADA*PDEHGM
Trigger: CATGCCGTGCTCATCGGGGCAGGCATCGGCATCACC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGTTTGGAGGAGTGGTTaGCCTCTGCCCCCTCGAACC +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRVWRSG*PLPPRT
Trigger: GGTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAAC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCAGCCTTGGGGAAGGGTaGTTTACACTGTCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFSLGEG*FTLSRR
Trigger: TCTTCTTGACAGTGTAAAGCACCCTTCCCCAAGGCT...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGTGCCTCCCCAGGCTTaGTGGAAATTAAACACGATC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPVPPQA*WKLNTI
Trigger: GATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCAC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGTCCTCACAGAACAGTaGAATGGCACCTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPVLTEQ*NGTWQS
Trigger: ACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGAC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGAGTGTATTAATAGCCTaGACTTGTGCCGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSVLIA*TCAARP
Trigger: TGGACGAGCGGCACAAGTGCAGGCTATTAATACACT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGGTGACTCTCCATGTTaGCCATGCCCCCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIGDSPC*PCPLPS
Trigger: GGAGGGGAGGGGGCATGGGCAACATGGAGAGTCACC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCCAAAAAGAAGGTGTaGAGTCAGACCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSKKKV*SQTHSS
Trigger: ACTGCTGTGGGTCTGACTGCACACCTTCTTTTTGGA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTCTTTTCCCTTGGGACCGAATGTaGAGCCAGATAGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: WTPSIQECWQLGQVCFLFPWDRM*SQIVSW
Trigger: CCAAGACACTATCTGGCTGCACATTCGGTCCCAAGG...GAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGCTCATCCGGGTCAATaGAGCCACTGCCTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRAHPGQ*SHCLSR
Trigger: TCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGCCAGGCAGAACAGCTaGCTGCGGTGGTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIARQNS*LRWLCQ
Trigger: CTGGCACAACCACCGCAGCCAGCTGTTCTGCCTGGC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCATAGCGAGCAATGGTaGGGATGTTCAGATACAAGT +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGHSEQW*GCSDTS
Trigger: ACTTGTATCTGAACATCCCCACCATTGCTCGCTATG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGTATCTCAGAGCCCTTaGACGACCTTTGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVVSQSP*TTFDSF
Trigger: GAAAGAGTCAAAGGTCGTCCAAGGGCTCTGAGATAC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGAGCTTCATGTTGTCTTaGACACCTTCGATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRSFMLS*TPSIQE
Trigger: CTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCAGCTACAATCCCATTaGAAAGTGCCTGGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWQLQSH*KVPGSN
Trigger: GTTGGAACCAGGCACTTTCCAATGGGATTGTAGCTG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACCCAGTCCAGGGAGATaGAGGCTTGGTGCAAGCACG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRPSPGR*RLGAST
Trigger: CGTGCTTGCACCAAGCCTCCATCTCCCTGGACTGGG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCAAATTAAACACGATCTaGTTGGAAGGCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGKLNTI*LEGPNT
Trigger: GGTGTTGGGGCCTTCCAACCAGATCGTGTTTAATTT...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGATTTGTATATGCGGGTaGGAGCCTGGTGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLICICG*EPGGNL
Trigger: CAGATTTCCACCAGGCTCCCACCCGCATATACAAAT...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGATTTGTATATGCGGGTaGGAGCCTGGTGGAAATCTG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWICICG*EPGGNL
Trigger: CAGATTTCCACCAGGCTCCCACCCGCATATACAAAT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTTGACTTCACAGAGATaGAGCCTGGAGGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWLTSQR*SLEVLP
Trigger: AGGCAAAACCTCCAGGCTCCATCTCTGTGAAGTCAA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTGGGAAACATCCAGATaGTCAGACCATGCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSWETSR*SDHACC
Trigger: ACAGCACGCATGGTCTGACCATCTGGATGTTTCCCA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCAGATAAGGGCTGTCTaGGCCCAAGACAGATTAAGG +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSQIRAV*AQDRLR
Trigger: CCTTAATCTGTCTTGGGCCCAGACAGCCCTTATCTG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp AGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTaGCCCAGTGCAGATGTCATGTACATATGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RAICRPMAFMSF*PSADVMYICSS
Trigger: GGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTCTGGTGCCTGTACATaGTACTCTGCAGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSSGACT*YSAEWK
Trigger: CTTCCATTCTGCAGAGTATCATGTACAGGCACCAGA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGGAATCTACAGCAGACTaGACAAGGCACTGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWESTAD*TRHCPF
Trigger: GAAGGGACAGTGCCTTGTTCAGTCTGCTGTAGATTC...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCAAGGAATGTGCATTTaGAGAAGGCTCCTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWQGMCI*RRLLQV
Trigger: TACTTGGAGGAGCCTTCTTCAAATGCACATTCCTTG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCAGCCAGAGTGTGGCTaGGCTGAGCTTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAQPECG*AELPGL
Trigger: TAAGCCTGGAAGCTCAGCTCAGCCACACTCTGGCTG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCCCCACAGTATGTGCTaGGAGAGCCTTTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAPHSMC*ESLCCL
Trigger: GAGGCAGCAAAGGCTCTCTCAGCACATACTGTGGGG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGATGTGAGTTTCCCTGGTaGGTTGTGTGCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRCEFPW*VVCLPR
Trigger: CCTGGGGAGGCACACAACTCACCAGGGAAACTCACA...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGTAAAACTCCAGGTGTaGGTTTCCCTGGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPVKLQV*VSLVSC
Trigger: ACAACTCACCAGGGAAACTCACACCTGGAGTTTTAC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGAAGAATCCAAAACGGTaGCATGCATGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVKNPKR*HACVCV
Trigger: CACACACACACATGCATGTCACCGTTTTGGATTCTT...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGACATTGCCAAGACCTaGGAGGTAGGCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDADIAKT*EVGKGQ
Trigger: CTGGCCCTTGCCTACCTCTCAGGTCTTGGCAATGTC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCTCCCCATCTTCTCCTaGAATGGTCTTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLPIFS*NGLKLL
Trigger: CAGCAGTTTAAGACCATTGCAGGAGAAGATGGGGAG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTAGGGTCAGTGCCTCCTaGAGCTCCTGGAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIRVSAS*SSWRVM
Trigger: CATCACCCTCCAGGAGCTGCAGGAGGCACTGACCCT...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTGCCATGCGGGACACTaGCAGTCCGATGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYICHAGH*QSDGLL
Trigger: GAGAAGGCCATCGGACTGGCAGTGTCCCGCATGGCA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCAGCTGGGGCAAGTATaGTTTCTTTTCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAQLGQV*FLFWCL
Trigger: CAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGCATGGAAAAGAAAGGTaGCAGCTACAATCCCATTGG +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWHGKER*QLQSHW
Trigger: CCAATGGGATTGTAGCTGGCACCTTTCTTTTCCATG...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGTTTAGTTTCCTTCTGTaGCCCAGAGAGCGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWFSFLL*PRERFV
Trigger: GACAAAACGCTCTCTGGGGCACAGAAGGAAACTAAA...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCAAAACGGTGACATaGATGTGTGTGTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSKTVT*MCVCAL
Trigger: CAATGCACACACACACATGCATGTCACCGTTTTGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGGTCCTCACAGAACAGTaGAATGGCACCTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWVLTEQ*NGTWQS
Trigger: ACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGAC...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCGTCCAGGAGGGCCCTaGCTGATTGGTCATTTCAGG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDARPGGP*LIGHFR
Trigger: CCTGAAATGACCAATCAGGCAGGGCCCTCCTGGACG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCACAATTTCACGTGTATaGCCACGGCCTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTTISRV*PRPPQS
Trigger: GGACTGTGGAGGCCGTGGGCATACACGTGAAATTGT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGCAGGCTGTTTATTCTaGGATGGGAGGGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTAGCLF*DGRDQQ
Trigger: TTGCTGGTCCCTCCCATCGCAGAATAAACAGCCTGC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGACTCATAGCGAGCAATaGTGGGGATGTTCAGATACA +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWTHSEQ*WGCSDT
Trigger: TGTATCTGAACATCCCCACCATTGCTCGCTATGAGT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCACAAAGATCCTGCGGGTaGGGGTCCCATAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISQRSCG*GSHKAH
Trigger: ATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTG...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGCTTCATGTTGTCTTaGACACCTTCGATCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPSFMLS*TPSIQE
Trigger: CTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGCCATCTGCAGGCCAATaGCCTTCATGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWPSAGQ*PSCHSC
Trigger: GCAAGAATGACATGAAGGCCATTGGCCTGCAGATGG...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGTCAGCAGCCACTTTCTaGAACACCTTGCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LVHLQFSQQAHKPLERPLSAATF*NTLLQS
Trigger: TGACTGGAGCAAGGTGTTCCAGAAAGTGGCTGCTGA...CAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp AGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGGTCTCTGTTGATCCCGAACTTCTCACAATaGCCCTTCAGCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SLVSRLTNHSKDRWSLLIPNFSQ*PFSTLA
Trigger: GGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGG...GATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCAGCAGACCCATGGTGTaGACTTGGGGCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDASRPMV*TWGRAW
Trigger: CCAAGCTCTGCCCCAAGTCCACACCATGGGTCTGCT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCCCTTTGCAACCATaGACTTCCAACCCATGGAAA +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAPPLQP*TSNPWK
Trigger: TTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTGGTCGTCACACATGTaGGCATTCACGGATTTTAGA +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWWSSHM*AFTDFR
Trigger: TCTAAAATCCGTGAATGCCCACATGTGTGACGACCA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCATGCAGCGCCCTCTCGTaGGCAACTGGAATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISCSALS*ATGICL
Trigger: CAGACAGATTCCAGTTGCCCACGAGAGGGCGCTGCA...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTGGGAAACATCCAGATaGTCAGACCATGCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWWETSR*SDHACC
Trigger: ACAGCACGCATGGTCTGACCATCTGGATGTTTCCCA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTTAGGGCAGCCCTTTTaGGGCCATGGCTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYILGQPF*GHGWVA
Trigger: AGCCACCCAGCCATGGCCCCAAAAGGGCTGCCCTAA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGTCCAAGCTTCCTTTCTaGCTAACTGGTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLSKLPF*LTGLPF
Trigger: GAAAGGAAGACCAGTTAGCCAGAAAGGAAGCTTGGA...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTGGTCAGGTTCTCCATaGCTCCGGGGAAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTWSGSP*LRGSAA
Trigger: TGCAGCGCTTCCCCGGAGTCATGGAGAACCTGACCA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGGTCTCTGTTGATCGTGGGTCTGATGCCTTaGAGGACTCATACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLVSRLTNHSKDRWSLLIVGLMP*RTHTAC
Trigger: ACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCAC...GATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TCGGCCTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCCCTTGGACGACCTTTaGCTCTTTCTCATTGTCACA +
Preference number: 4 (lower is better)
Translates to: SAWSISSLVSRLTNHSKDPLDDL*LFLIVT
Trigger: TGTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGG...GTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAGGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTCATCATCCAGGTTATaGTCCGGCTTCTTTACCTCC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWSSSRL*SGFFTS
Trigger: GGAGGTAAAGAAGCCGGATCATAACCTGGATGATGA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAAGACGCCCCCTGCCGTaGACACACATCGATGTCATA +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRRRPLP*THIDVI
Trigger: TATGACATCGATGTGTGTGCACGGCAGGGGGCGTCT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAAGACGCCCCCTGCCGTaGACACACATCGATGTCATA +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISRRPLP*THIDVI
Trigger: TATGACATCGATGTGTGTGCACGGCAGGGGGCGTCT...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCAGAGGCAAAGATCCTaGGGGTGGGGGTCCCATAAG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIQRQRS*GWGSHK
Trigger: CTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCACCGATGAGCACGGCATaGTCAGAGGCAAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISPMSTA*SEAKIL
Trigger: CAGGATCTTTGCCTCTGAGCATGCCGTGCTCATCGG...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCTGTACATGATACTCTaGAGAATGGAAGCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSLYMIL*RMEAKG
Trigger: CCCCTTTGCTTCCATTCTGCAGAGTATCATGTACAG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTGAGATGGAGGCTTGGTaGAAGCACGAGCCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPEMEAW*KHEPRF
Trigger: AAAGCGGGGCTCGTGCTTGCACCAAGCCTCCATCTC...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTGTGTGTGCATTGAGTaGATGTGTGAGACATCCTGT +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPCVCIE*MCETSC
Trigger: ACAGGATGTCTCACACATGCACTCAATGCACACACA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCAAGTCCTTCCACCTaGTCCCACCCACTATATTAT +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAPSPST*SHPLYY
Trigger: ATAATATAGTGGGTGGGAGCAGGTGGAAGGACTTGG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGTTAACCACTGCGAACTaGTTAGCATTTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLLTTAN*LAFGHH
Trigger: ATGATGCCCAAATGCTAAGCAGTTCGCAGTGGTTAA...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGCAAAGGCTTGGAGGTaGGAAGCTGCACAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRAKAWR*EAAQCP
Trigger: AGGACACTGTGCAGCTTCGCACCTCCAAGCCTTTGC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTACTCATAGCGAGCAATaGTGGGGATGTTCAGATACA +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSTHSEQ*WGCSDT
Trigger: TGTATCTGAACATCCCCACCATTGCTCGCTATGAGT...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGTATGCTTTCTTTTCTaGTGCCTGTACATGATACTC +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGVCFLF*CLYMIL
Trigger: GAGTATCATGTACAGGCACCAGAAAAGAAAGCATAC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATAAAGTCCACCTTATGGAGCTTCATGTTGTCTTGGACACCTTCGATCCAGTCGATCCAGGAGTGCTaGCAGCTGGGGCAAGTATGC +
Preference number: 4 (lower is better)
Translates to: QIKSTLWSFMLSWTPSIQSIQEC*QLGQVC
Trigger: GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGA...CTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGTGGACTTTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TGCCCAGTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGTATTGAGCACTCGAAAGACCGCTaGTCTCTGTTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: CPVQMSCTYAAPGSGRIEHSKDR*SLLIQI
Trigger: TATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTG...CTCAATACGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp AGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCGCTGGTCTCTGTTGATCCTTTCTTCTCCTTGTTaGCCAGGAGGTCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLVSRLTNHSKDRWSLLILSSPC*PGGQGP
Trigger: TGGCCCTTGACCTCCTGGCCAACAAGGAGAAGAAAG...GATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGTCAGGCCGCCCAGGCTaGGTGCGCGTCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVSGRPG*VRVCSP
Trigger: GGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGACGCAAACAGAGGCTaGAAAACAGAGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTDANRG*KTETEG
Trigger: TCCCTCTGTCTCTGTTTTCCAGCCTCTGTTTGCGTC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGATGCCCAGGAAATGTaGGGCTCACAGGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRDAQEM*GSQELM
Trigger: CATGAGCTCCTGTGAGCCCCACATTTCCTGGGCATC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGCAGCTACAATCCCATTaGAAAGTGCCTGGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWQLQSH*KVPGSN
Trigger: GTTGGAACCAGGCACTTTCCAATGGGATTGTAGCTG...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCTTCCATCCACCCAACTaGCTCATCCCCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAFHPPN*LIPCRS
Trigger: TGACCTGCAGGGGATGAGCCAGTTGGGTGGATGGAA...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAAATTAAACACGATCTaGTTGGAAGGCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPKLNTI*LEGPNT
Trigger: GGTGTTGGGGCCTTCCAACCAGATCGTGTTTAATTT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTGGTCGTCACACATGTaGGCATTCACGGATTTTAGA +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPWSSHM*AFTDFR
Trigger: TCTAAAATCCGTGAATGCCCACATGTGTGACGACCA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCACTTCATGGGGGAGGATaGGCACACGTGCCGATAACT +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISLHGGG*AHVPIT
Trigger: AGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAG...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGAGTTTGCAGCTTCATaGGGGAGGATGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTREFAAS*GRMGTR
Trigger: ACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTGGCAAAGTGGTTCAGTaGGCTTGTGTTTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSGKVVQ*ACVCAF
Trigger: AAAAGCACAAACACAAGCCCACTGAACCACTTTGCC...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGAACTGCTTAGCATTTaGGCATCATCGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTELLSI*ASSAIS
Trigger: GCTGATGGCCGATGATGCCCAAATGCTAAGCAGTTC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTCTCAACTCCCAGGCTaGGCTGGTGCTGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSQLPG*AGAGLS
Trigger: GCTAAGCCCAGCACCAGCCCAGCCTGGGAGTTGAGA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCGCTATTCTAGTCACTaGGGACACAGAGACAAATCA +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPRYSSH*GHRDKS
Trigger: TGATTTGTCTCTGTGTCCCCAGTGACTAGAATAGCG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGCCAAGGGTACCTCATaGGGTCACCAGCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAAKGTS*GHQLKQ
Trigger: CTGTTTCAGCTGGTGACCCCATGAGGTACCCTTGGC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGACAGGCTTGATGATTaGCTGAAGGAGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTDRLDD*LKEEDG
Trigger: CCCATCTTCCTCCTTCAGCCAATCATCAAGCCTGTC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTCCAAGCTTCCTTTCTaGCTAACTGGTCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSSKLPF*LTGLPF
Trigger: GAAAGGAAGACCAGTTAGCCAGAAAGGAAGCTTGGA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp AATAAGCTTCCAAATGACTGTGATGATTGGGCAGGTTaGGGACCATGGATGTGGGGGAAGGCTCCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: NKLPNDCDDWAG*GPWMWGKAPSE
Trigger: TTCCGACGGAGCCTTCCCCCACATCCATGGTCCCAAACCTGCCCAATCATCACAGTCATTTGGAAGCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp AACCCATGGAAAAGAAAGGTGCCAGCTACAATCCCATaGGAAAGTGCCTGGTTCCAACCCCATGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: NPWKRKVPATIP*ESAWFQPHDGS
Trigger: GCTGCCATCATGGGGTTGGAACCAGGCACTTTCCAATGGGATTGTAGCTGGCACCTTTCTTTTCCATGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTACGGCCCAGTGGGTCTaGTGCCTTGAAGGACTCATA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPTAQWV*CLEGLI
Trigger: TATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTTTATACTAATGCAATaGAGCAGACCCATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPFILMQ*SRPMVW
Trigger: CCACACCATGGGTCTGCTTCATTGCATTAGTATAAA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACAGCCCCTTTCCCTTTaGTTAACTGCCACTCACGGA +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRQPLSL*LTATHG
Trigger: TCCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCCCCAAATTACAAGTaGCAATTAGGTGCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSPNYK*QLGAKD
Trigger: GTCTTTTGCACCTAATTGTCACTTGTAATTTGGGGA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGGGCCCATTTGTCCCTaGGTAGTATTAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTGPICP*VVLGQP
Trigger: GGGCTGCCCTAATACTACTCAGGGACAAATGGGCCC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGCTGCTTTGAATTCTTaGAGGCTGATCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTAALNS*RLISPS
Trigger: AGATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCAAGGACTCTTTCACATaGAGAGCTGCTTTGAATTCT +
Preference number: 4 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFKDSFT*RAALNS
Trigger: AGAATTCAAAGCAGCTCTGCATGTGAAAGAGTCCTT...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCACGACTGCAGCACAGTaGGCAGCTCATCCGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTTTAAQ*AAHPGQ
Trigger: TTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCCAGATAGTGTCTTTCTaGTCAGGAGCACTGCTGATG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTQIVSF*SGALLM
Trigger: CATCAGCAGTGCTCCTGAGCAGAAAGACACTATCTG...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGATAAAGTCCACCTTATGGAGCTTCATGTTGTCTTGGACACCTTCGATCCAGCCGATGAGCACGGCATaGTCAGAGGCAAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: QIKSTLWSFMLSWTPSIQPMSTA*SEAKIL
Trigger: CAGGATCTTTGCCTCTGAGCATGCCGTGCTCATCGG...CTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGTGGACTTTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp TTGGAAAAATCTGAAGCCGAACTTCTCACAATGGCCCTTCAGCACCTTGGCCAGCAGCTGGGGCAAGTATaGTTTCTTTTCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LEKSEAELLTMALQHLGQQLGQV*FLFWCL
Trigger: CAGGCACCAGAAAAGAAAGCATACTTGCCCCAGCTG...CTGGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGGCTTCAGATTTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGATGTCATGTACATATaGAGCTCCAGGAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDADVMYI*SSRKRP
Trigger: CGGCCGCTTCCTGGAGCTGCATATGTACATGACATC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTGCAGAGTCATTCTTGCCCAGTaGAGATGTCATGTACATATG +
Preference number: 4 (lower is better)
Translates to: VKGHLQANGLHVILAQCRVILAQ*RCHVHM
Trigger: CATATGTACATGACATCTGCACTGGGCAAGAATGAC...TCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTTGGCCTTGGGGAGTTTaGAGCTTCATGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPWPWGV*SFMGED
Trigger: ATCCTCCCCCATGAAGCTGCAAACTCCCCAAGGCCA...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGTGGGCTTGTGTTTGTaGTTTTGTTCCCCAAATTAC +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPVGLCL*FCSPNY
Trigger: GTAATTTGGGGAACAAAAGCACAAACACAAGCCCAC...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTTTAACCACTGCGAACTaGTTAGCATTTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPLTTAN*LAFGHH
Trigger: ATGATGCCCAAATGCTAAGCAGTTCGCAGTGGTTAA...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCCAGATCATAAAAAGATaGATCAATCTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGQIIKR*INLSGR
Trigger: CCTTCCTGACAGATTGATGCATCTTTTTATGATCTG...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGGAGAAGCATTTAGAATaGCATGTTGACAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDREKHLE*HVDRLD
Trigger: ATCAAGCCTGTCAACATGGCATTCTAAATGCTTCTC...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGCCTGTTTGTCCACTaGCCTTGGGACCGAATGTGC +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPSLFVH*PWDRMC
Trigger: GCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGTATGCTTTCTTTTCTaGTGCCTGTACATGATACTC +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWVCFLF*CLYMIL
Trigger: GAGTATCATGTACAGGCACCAGAAAAGAAAGCATAC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGATAAAGTCCACCTTATaGAGCTTCATGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: CARLWVPMSGLGEFAASWIKSTL*SFMLSW
Trigger: CCAAGACAACATGAAGCTCCATAAGGTGGACTTTAT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTGGAAAAATCTGAAGCCGAACTTCTCACAATGGCCCTTCAGCACCTTGGCCAGCCATCTGCAGGCCAATaGCCTTCATGTCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LEKSEAELLTMALQHLGQPSAGQ*PSCHSC
Trigger: GCAAGAATGACATGAAGGCCATTGGCCTGCAGATGG...CTGGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGGCTTCAGATTTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTAAATGTTTGGAGGAGTaGTTGCCCTCTGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIKCLEE*LPSAPS
Trigger: CGAGGGGGCAGAGGGCAACCACTCCTCCAAACATTT...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCATGATTGGGCAGGTTTaGGACCATGGATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAMIGQV*DHGCGG
Trigger: TCCCCCACATCCATGGTCCCAAACCTGCCCAATCAT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGATCTAGTGGGGAGCTTTaGAACAGGGCGTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRSSGEL*NRALSS
Trigger: GGAAGACAACGCCCTGTTCCAAAGCTCCCCACTAGA...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCTTCATGGGGGAGGATaGGCACACGTGCCGATAACT +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYILHGGG*AHVPIT
Trigger: AGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCCCCATGTCTGGCCTTaGGGAGTTTGCAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIPHVWP*GVCSFM
Trigger: CATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGGAGTATTTTTCCCCCTaGGATGAATTTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGEYFSP*DEFPHK
Trigger: TTTATGAGGAAATTCATCCCAGGGGGAAAAATACTC...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTACCCACAGCAGTGTGTaGAGGATGGATCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPTHSSV*RMDQSQ
Trigger: CTGGCTCTGATCCATCCTCCACACACTGCTGTGGGT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCAGAAGTTGGGCCCATaGAAGATGAGCAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPQKLGP*KMSRSH
Trigger: GTGGCTTCTGCTCATCTTTCATGGGCCCAACTTCTG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTGTGGGTCTGATGCCTTaGAGGACTCATACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPVGLMP*RTHTAC
Trigger: ACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCAC...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGGCAATTTAAGGACTaGACCAAGGCAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPRQFKD*TKAGPV
Trigger: CACTGGCCCTGCCTTGGTTCAGTCCTTAAATTGCCT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGTGCTTTCTTTTCTGGTaGCTGTACATGATACTCTGC +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAACFLFW*LYMILC
Trigger: GCAGAGTATCATGTACAGGCACCAGAAAAGAAAGCA...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTACAGACTCAACAGAGGGAAAGAGGTTCCAAGAGTGTGTGGCCTCAGGCTGGTGCTTTCTTTTCTGGTaGCTGTACATGATACTCTGC +
Preference number: 4 (lower is better)
Translates to: STDSTEGKRFQECVASGWCFLFW*LYMILC
Trigger: GCAGAGTATCATGTACAGGCACCAGAAAAGAAAGCA...CCAGCCTGAGGCCACACACTCTTGGAACCTCTTTCCCTCTGTTGAGTCTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGGTCATTCTTGCCCAGTaGAGATGTCATGTACATATG +
Preference number: 4 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAVILAQ*RCHVHM
Trigger: CATATGTACATGACATCTGCACTGGGCAAGAATGAC...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGGCTTATTTCTCCCTATaGAAATGGATTTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLAYFSL*KWIWWK
Trigger: TTTCCACCAAATCCATTTGCATAGGGAGAAATAAGC...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGTGCCTCCCCAGGCTTaGTGGAAATTAAACACGATC +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRVPPQA*WKLNTI
Trigger: GATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCAC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTTTAGTTTCCTTCTGTaGCCCAGAGAGCGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTFSFLL*PRERFV
Trigger: GACAAAACGCTCTCTGGGGCACAGAAGGAAACTAAA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTCCAAAACGGTGACATaGATGTGTGTGTGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTSKTVT*MCVCAL
Trigger: CAATGCACACACACACATGCATGTCACCGTTTTGGA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCTGGTCAGACCATGCGTaGTGTACACTCACATGTGTG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAWSDHA*CTLTCV
Trigger: CACACATGTGAGTGTACAGCACGCATGGTCTGACCA...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACAGATGGTCAGACCATaGGTGCTGTACACTCACATG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRQMVRP*VLYTHM
Trigger: CATGTGAGTGTACAGCACGCATGGTCTGACCATCTG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCATTTCAGGAATGCCTaGTGTCTCCGTCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPHFRNA*CLRQRC
Trigger: ACAGCGCTGACGGAGACAGCAGGCATTCCTGAAATG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAAGGAGTGCTGGCAGCTaGGGCAAGTATGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISRSAGS*GKYAFF
Trigger: AAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCT...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CTCGAAAGACCGCTGGTCTCTGTTGATCCAGATAAAGTCCACCTTATGGAGCTTAGGAGTGCTGGCAGCTaGGGCAAGTATGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LERPLVSVDPDKVHLMELRSAGS*GKYAFF
Trigger: AAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCT...AAGCTCCATAAGGTGGACTTTATCTGGATCAACAGAGACCAGCGGTCTTTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGTTCATCTGCCCCTTaGGGTCTCCTGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPSSSAP*GLLFSL
Trigger: CAGAGAGAACAGGAGACCCCAAGGGGCAGATGAACT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCCGTCGGAAAATGTTTaGAGGAGTGGTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIPSENV*RSGCPL
Trigger: CAGAGGGCAACCACTCCTCCAAACATTTTCCGACGG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTATGATTGGGCAGGTTTaGGACCATGGATGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPMIGQV*DHGCGG
Trigger: TCCCCCACATCCATGGTCCCAAACCTGCCCAATCAT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCAGGAGCTCATGGTGTaGCACAGATGGAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAQELMV*HRWKCP
Trigger: TGGACATTTCCATCTGTGCCACACCATGAGCTCCTG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAACACGTGCCGATAACTaGCCTTGCTCCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRTRADN*PCSFSL
Trigger: AAGAGAGAAGGAGCAAGGCCAGTTATCGGCACGTGT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCACACGTGCCGATAACTaGCCTTGCTCCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDATRADN*PCSFSL
Trigger: AAGAGAGAAGGAGCAAGGCCAGTTATCGGCACGTGT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGGCAAAGTGGTTCAGTaGGCTTGTGTTTGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTGKVVQ*ACVCAF
Trigger: AAAAGCACAAACACAAGCCCACTGAACCACTTTGCC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCACACAGAACAGTGCAATaGCACCTGGCAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISHRTVQ*HLAKWF
Trigger: GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTG...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCCGCTATTCTAGTCACTaGGGACACAGAGACAAATCA +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTRYSSH*GHRDKS
Trigger: TGATTTGTCTCTGTGTCCCCAGTGACTAGAATAGCG...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAGACAGGCTTGATGATTaGCTGAAGGAGGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISDRLDD*LKEEDG
Trigger: CCCATCTTCCTCCTTCAGCCAATCATCAAGCCTGTC...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAGACCAGTTAGCTGGGTaGTCTTCCAAGCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRDQLAG*SSKLPF
Trigger: GAAAGGAAGCTTGGAAGACCACCCAGCTAACTGGTC...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp CATCCAGGTTATGATCCGGCTTCTTTACCTCCCCCTTaGCAACCATGGACTTCCAACCCATGGAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: HPGYDPASLPPP*QPWTSNPWKRK
Trigger: CTTTCTTTTCCATGGGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp TTCCCTGCCACACTAAAACTCACTACCTGTCTTTCTTaGTTTCTCCAGCAGGCTACACTCACACAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: FPATLKLTTCLS*FLQQATLTQLG
Trigger: CCCTAGCTGTGTGAGTGTAGCCTGCTGGAGAAACAAAGAAAGACAGGTAGTGAGTTTTAGTGTGGCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp TTGATCCAGATAAAGTCCACCTTATGGAGCTTCATGTaGTCTTGGACACCTTCGATCCAGGAGTGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LIQIKSTLWSFM*SWTPSIQECWQ
Trigger: CTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGTGGACTTTATCTGGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
3UTR CAA 72 bp AGGCTCACAAACCACTCGAAAGACCGCTGGTCTCTGTaGATCCAGATAAAGTCCACCTTATGGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RLTNHSKDRWSL*IQIKSTLWSFM
Trigger: CATGAAGCTCCATAAGGTGGACTTTATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTGGTTTGTGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGAACATGAAGTCTCTTaGCTTCACAGAGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAEHEVS*LHRDGA
Trigger: GGCTCCATCTCTGTGAAGTCAAGAGACTTCATGTTC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCTCAGAGAGGTCAAATaGTACACCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDALREVK*YTQGHT
Trigger: TGTGTGACCTTGGGTGTATCATTTGACCTCTCTGAG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGGCTGGAAGCTTCCTTaGGAGTCAAGTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIGWKLP*ESSLFP
Trigger: TGGAAAGAGACTTGACTCTCAAGGAAGCTTCCAGCC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTCCGAAGTCTCAATCTaGAAGTGGAGAAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYISEVSI*KWRRVL
Trigger: GAGCACCCTTCTCCACTTTCAGATTGAGACTTCGGA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAGCTGCTTTGAATTCTTaGAGGCTGATCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISAALNS*RLISPS
Trigger: AGATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGC...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTTTCACATGCAGAGCTaGTTTGAATTCTTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTFHMQS*FEFLQA
Trigger: AGCCTGCAAGAATTCAAAGCAGCTCTGCATGTGAAA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGACCCCACTCTGTACCTaGAGACGCCCCCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVTPLCT*RRPLPC
Trigger: GCACGGCAGGGGGCGTCTGCAGGTACAGAGTGGGGT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGTCATTCTTGCCCAGTaGAGATGTCATGTACATATG +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTVILAQ*RCHVHM
Trigger: CATATGTACATGACATCTGCACTGGGCAAGAATGAC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAAGGGGCAGGGAAAGATaGTGCTTATTTCTCCCTATG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRRGRER*CLFLPM
Trigger: CATAGGGAGAAATAAGCAGCATCTTTCCCTGCCCCT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACCAAGTCCTTCCACCTaGTCCCACCCACTATATTAT +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRPSPST*SHPLYY
Trigger: ATAATATAGTGGGTGGGAGCAGGTGGAAGGACTTGG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATAAAGTCCACCTTATGGAGCTTCATGTTGTCTTGGACACCTTCGATCCAGACACTGCCAGTCCGATaGCCTTCTCCAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: QIKSTLWSFMLSWTPSIQTLPVR*PSPGKT
Trigger: TGTTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGT...CTGGATCGAAGGTGTCCAAGACAACATGAAGCTCCATAAGGTGGACTTTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp GTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGTATTGAGCCTCCTGTATGCTTTCTTTTCTaGTGCCTGTACATGATACTC +
Preference number: 4 (lower is better)
Translates to: VQMSCTYAAPGSGRIEPPVCFLF*CLYMIL
Trigger: GAGTATCATGTACAGGCACCAGAAAAGAAAGCATAC...AGGAGGCTCAATACGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp TCATTCTTGCCCAGTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGATAAAGTCCACCTTATaGAGCTTCATGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SFLPSADVMYICSSRKRPIKSTL*SFMLSW
Trigger: CCAAGACAACATGAAGCTCCATAAGGTGGACTTTAT...CGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACACTCGAAAGACCGCTaGTCTCTGTTGATCCAGATA +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRHSKDR*SLLIQI
Trigger: TATCTGGATCAACAGAGACCAGCGGTCTTTCGAGTG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTCAGCAGCCACTTTCTaGAACACCTTGCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYISAATF*NTLLQS
Trigger: TGACTGGAGCAAGGTGTTCCAGAAAGTGGCTGCTGA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAGTTCATCTGCCCCTTaGGGTCTCCTGTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSSSAP*GLLFSL
Trigger: CAGAGAGAACAGGAGACCCCAAGGGGCAGATGAACT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAAATGACTGTGATGATTaGGCAGGTTTGGGACCATGG +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISNDCDD*AGLGPW
Trigger: CCATGGTCCCAAACCTGCCCAATCATCACAGTCATT...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGACGCAAACAGAGGCTaGAAAACAGAGACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIDANRG*KTETEG
Trigger: TCCCTCTGTCTCTGTTTTCCAGCCTCTGTTTGCGTC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCCATTGGAAAGTGCCTaGTTCCAACCCCATGATGGC +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTPLESA*FQPHDG
Trigger: GCCATCATGGGGTTGGAACCAGGCACTTTCCAATGG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGGAGGAACCGACATCTaGTCTACACTCTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTGGTDI*STLCAR
Trigger: CCTAGCACAGAGTGTAGACCAGATGTCGGTTCCTCC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAGGGCCCTGCCTGATTaGTCATTTCAGGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTRALPD*SFQECL
Trigger: CAGGCATTCCTGAAATGACCAATCAGGCAGGGCCCT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCCCTTGGACGACCTTTaGCTCTTTCTCATTGTCACA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPPLDDL*LFLIVT
Trigger: TGTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTTGGAAGCAAAGGGGGTaGTGCCGATGCCTGCCCCGA +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIWKQRG*CRCLPR
Trigger: TCGGGGCAGGCATCGGCATCACCCCCTTTGCTTCCA...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCAGAGGGAGGAGGAACTaGTGGATAATATGTGATAAA +
Preference number: 4 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTRGRRN*WIICDK
Trigger: TTTATCACATATTATCCATCAGTTCCTCCTCCCTCT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCTCAGATGGAGGAGGTaGGGCCCACCCTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSILRWRR*GPPCPL
Trigger: CAGAGGACAGGGTGGGCCTCACCTCCTCCATCTGAG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCAAGAATCCAAAACGGTaGCATGCATGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAKNPKR*HACVCV
Trigger: CACACACACACATGCATGTCACCGTTTTGGATTCTT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCTCAGAGAGGTCAAATaGTACACCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPLREVK*YTQGHT
Trigger: TGTGTGACCTTGGGTGTATCATTTGACCTCTCTGAG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCATCAGGATGGCTGGCTaGCTTTTCTCCTTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTIRMAG*LFSFHQ
Trigger: CTGGTGAAAGGAGAAAAGTCAGCCAGCCATCCTGAT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGGCTGGAAGCTTCCTTaGGAGTCAAGTCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTGWKLP*ESSLFP
Trigger: TGGAAAGAGACTTGACTCTCAAGGAAGCTTCCAGCC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGACATGGAAAAGAAAGGTaGCAGCTACAATCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRHGKER*QLQSHW
Trigger: CCAATGGGATTGTAGCTGGCACCTTTCTTTTCCATG...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCACACCCACCCCTACTaGTGCATCCCAGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIHTHPY*CIPAPP
Trigger: AGGTGGGGCTGGGATGCAGCAGTAGGGGTGGGTGTG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGATGTGTGTGCATTGAGTaGATGTGTGAGACATCCTGT +
Preference number: 4 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRCVCIE*MCETSC
Trigger: ACAGGATGTCTCACACATGCACTCAATGCACACACA...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCTGACTATTTGTATATaGGGGTGGGAGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTLTICI*GWEPGG
Trigger: TCCACCAGGCTCCCACCCGCATATACAAATAGTCAG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAGCCAGTCATCCGGATaGATTTTCCTGTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSQSSG*IFLLMA
Trigger: GGCCATCAACAGGAAAATGCATCCGGATGACTGGCT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTAGTGTATTAATAGCCTaGACTTGTGCCGCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPSVLIA*TCAARP
Trigger: TGGACGAGCGGCACAAGTGCAGGCTATTAATACACT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCACACTGCCAGTCCGATaGCCTTCTCCAGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTTLPVR*PSPGKT
Trigger: TGTTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCCTTCAGGGCCCGTCTaGGCTGGGTCTCCAGATGTG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIPSGPV*AGSPDV
Trigger: CACATCTGGAGACCCAGCCCAGACGGGCCCTGAAGG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388866.8
CDS-3UTR TCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCATTTATACTAATGCAATaGAGCAGACCCATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISFILMQ*SRPMVW
Trigger: CCACACCATGGGTCTGCTTCATTGCATTAGTATAAA...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCGTAAAACTCCAGGTGTaGGTTTCCCTGGTGAGTTGT +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTVKLQV*VSLVSC
Trigger: ACAACTCACCAGGGAAACTCACACCTGGAGTTTTAC...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAGGAAGGAAATGTGCTTaGGAAGCATTTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: VSCHLTATVTDGWHQLISGRKCA*EAFRMP
Trigger: TGGCATTCTAAATGCTTCTCAAGCACATTTCCTTCC...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTGGCAAAGAATCGCTCTaGAAAGAAGGACTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPGKESL*KEGLFH
Trigger: GTGAAAGAGTCCTTCTTTGCAGAGCGATTCTTTGCC...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGTCGCGCAGACACGACTaGAGCACAGTGCGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVSRRHD*STVRSS
Trigger: TGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGA...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGGCAGGGAAAGATGCTaGTTATTTCTCCCTATGCAA +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYIGRERC*LFLPMQ
Trigger: TTGCATAGGGAGAAATAAGCAGCATCTTTCCCTGCC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTGGCAGGGAAAGATGCTaGTTATTTCTCCCTATGCAA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPGRERC*LFLPMQ
Trigger: TTGCATAGGGAGAAATAAGCAGCATCTTTCCCTGCC...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGTGGGCTTGTGTTTGTaGTTTTGTTCCCCAAATTAC +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAVGLCL*FCSPNY
Trigger: GTAATTTGGGGAACAAAAGCACAAACACAAGCCCAC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTCCACAGTTAACCACTaGGAACTGCTTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: RILESYVQVLPPAPTHYISTVNH*ELLSIW
Trigger: CCAAATGCTAAGCAGTTCGCAGTGGTTAACTGTGGA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCATAGCGAGCAATGGTaGGGATGTTCAGATACAAGT +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPHSEQW*GCSDTS
Trigger: ACTTGTATCTGAACATCCCCACCATTGCTCGCTATG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTTCTCAACTCCCAGGCTaGGCTGGTGCTGGGCTTAGC +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSISQLPG*AGAGLS
Trigger: GCTAAGCCCAGCACCAGCCCAGCCTGGGAGTTGAGA...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCGCTTGATGAGGAGATaGGTGACCTTGGAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIRLMRR*VTLEGR
Trigger: CCTCCCCTCCAAGGTCACTCATCTCCTCATCAAGCG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGCGTCTGCAGCCCCGTaGTGGAGTCTTTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVASAAP*WSLSSP
Trigger: AGGAGAAGAAAGACTCCATCACGGGGCTGCAGACGC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTGCCACGTTTCCAAATaGTTTGGCACAGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTCHVSK*FGTACL
Trigger: TAAACAGGCTGTGCCAAATCATTTGGAAACGTGGCA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGACATTGCCAAGACCTaGGAGGTAGGCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVDIAKT*EVGKGQ
Trigger: CTGGCCCTTGCCTACCTCTCAGGTCTTGGCAATGTC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCAAGGACTCTTTCACATaGAGAGCTGCTTTGAATTCT +
Preference number: 4 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAKDSFT*RAALNS
Trigger: AGAATTCAAAGCAGCTCTGCATGTGAAAGAGTCCTT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTACGACTGCAGCACAGTaGGCAGCTCATCCGGGTCAA +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSITTAAQ*AAHPGQ
Trigger: TTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGT...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCAAAGTGGCCACTCCTaGGGATGCAGGAACTGGAGC +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVQSGHS*GCRNWS
Trigger: GCTCCAGTTCCTGCATCCGCAGGAGTGGCCACTTTG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTCCACAGTTAACCACTaGGAACTGCTTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTSTVNH*ELLSIW
Trigger: CCAAATGCTAAGCAGTTCGCAGTGGTTAACTGTGGA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCATCCTTTTCTTCCCTaGCACACTAAAACTCACTAC +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPHPFLP*HTKTHY
Trigger: GTAGTGAGTTTTAGTGTGGCAGGGAAGAAAAGGATG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCAAAGATCCTGCGGGTaGGGGTCCCATAAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIQRSCG*GSHKAH
Trigger: ATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTTGCAGCGCCCTCTCGTaGGCAACTGGAATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSICSALS*ATGICL
Trigger: CAGACAGATTCCAGTTGCCCACGAGAGGGCGCTGCA...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTGGAGGGCCAGTCCCCTaGCTTAGGCCCGAAATACTT +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIGGPVP*LRPEIL
Trigger: AAGTATTTCGGGCCTAAGCCAGGGGACTGGCCCTCC...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGGAGGGCCAGTCCCCTaGCTTAGGCCCGAAATACTT +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVGGPVP*LRPEIL
Trigger: AAGTATTTCGGGCCTAAGCCAGGGGACTGGCCCTCC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTATGGTCTTAAACTGCTaGGTCACCCACCGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIMVLNC*VTHRSH
Trigger: GTGGCTCCGGTGGGTGACTCAGCAGTTTAAGACCAT...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGAGGAAAGCCCAGAACTaGACACTGGGTATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVRKAQN*TLGMGR
Trigger: CCTCCCCATACCCAGTGTCCAGTTCTGGGCTTTCCT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTGCTTATTTCTCCCTATaGAAATGGATTTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPAYFSL*KWIWWK
Trigger: TTTCCACCAAATCCATTTGCATAGGGAGAAATAAGC...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTGAAAGTGGAGAAGGGTaGTCCAAGTGTCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIESGEG*SKCQAM
Trigger: CATCGCCTGACACTTGGAGCACCCTTCTCCACTTTC...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGCAGGCTGTTTATTCTaGGATGGGAGGGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVAGCLF*DGRDQQ
Trigger: TTGCTGGTCCCTCCCATCGCAGAATAAACAGCCTGC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCTTTCTTCTCCTTGTTaGCCAGGAGGTCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSILSSPC*PGGQGP
Trigger: TGGCCCTTGACCTCCTGGCCAACAAGGAGAAGAAAG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGATGCGGGTGGGAGCCTaGTGGAAATCTGTTACGAGA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVMRVGA*WKSVTR
Trigger: TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCAT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGGAGGAACCGACATCTaGTCTACACTCTGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVGGTDI*STLCAR
Trigger: CCTAGCACAGAGTGTAGACCAGATGTCGGTTCCTCC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCTGACTATTTGTATATaGGGGTGGGAGCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVLTICI*GWEPGG
Trigger: TCCACCAGGCTCCCACCCGCATATACAAATAGTCAG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCCGATGATGCCCATCTaGACATCTGGGAAACATCCA +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIPMMPI*TSGKHP
Trigger: TGGATGTTTCCCAGATGTGCAGATGGGCATCATCGG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGGAGCTGAACTGAGGTaGAATGTCTTGAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVGAELR*NVLSTW
Trigger: CCAAGTGCTCAAGACATTCCACCTCAGTTCAGCTCC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTGCTCACAGGAGCTCATaGTGTGGCACAGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIAHRSS*CGTDGN
Trigger: ATTTCCATCTGTGCCACACCATGAGCTCCTGTGAGC...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCCTCCCCAGGCTTGCTaGAAATTAAACACGATCTGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVPPQAC*KLNTIW
Trigger: CCAGATCGTGTTTAATTTCCAGCAAGCCTGGGGAGG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGCCCATCTGCACATCTaGGAAACATCCAGATGGTCA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVAHLHI*ETSRWS
Trigger: TGACCATCTGGATGTTTCCCAGATGTGCAGATGGGC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTGACCAGTTAGCTGGGTaGTCTTCCAAGCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIDQLAG*SSKLPF
Trigger: GAAAGGAAGCTTGGAAGACCACCCAGCTAACTGGTC...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCTGTTTATTCTGCGATaGGAGGGACCAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSILFILR*EGPARK
Trigger: CTTCCTTGCTGGTCCCTCCCATCGCAGAATAAACAG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCTCCCCATCTTCTCCTaGAATGGTCTTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSILPIFS*NGLKLL
Trigger: CAGCAGTTTAAGACCATTGCAGGAGAAGATGGGGAG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGTCCAAAAAGAAGGTGTaGAGTCAGACCCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVSKKKV*SQTHSS
Trigger: ACTGCTGTGGGTCTGACTGCACACCTTCTTTTTGGA...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGTATCTCAGAGCCCTTaGACGACCTTTGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVVSQSP*TTFDSF
Trigger: GAAAGAGTCAAAGGTCGTCCAAGGGCTCTGAGATAC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGAATGACTGTGATGATTaGGCAGGTTTGGGACCATGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVNDCDD*AGLGPW
Trigger: CCATGGTCCCAAACCTGCCCAATCATCACAGTCATT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
3UTR CAA 72 bp ACTATATTATTAAGTCCTAAACGAACAGCTGACTATTaGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: TILLSPKRTADY*YMRVGAWWKSV
Trigger: AACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGTTCGTTTAGGACTTAATAATATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCAAGGAATGTGCATTTaGAGAAGGCTCCTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVQGMCI*RRLLQV
Trigger: TACTTGGAGGAGCCTTCTTCAAATGCACATTCCTTG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTGGAAGGAAATGTGCTTaGGAAGCATTTAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIGRKCA*EAFRMP
Trigger: TGGCATTCTAAATGCTTCTCAAGCACATTTCCTTCC...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCATCCTTTTCTTCCCTaGCACACTAAAACTCACTAC +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVHPFLP*HTKTHY
Trigger: GTAGTGAGTTTTAGTGTGGCAGGGAAGAAAAGGATG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR TCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGTCCCCAAATTACAAGTaGCAATTAGGTGCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVSPNYK*QLGAKD
Trigger: GTCTTTTGCACCTAATTGTCACTTGTAATTTGGGGA...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGAGAAGCATTTAGAATaGCATGTTGACAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVEKHLE*HVDRLD
Trigger: ATCAAGCCTGTCAACATGGCATTCTAAATGCTTCTC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGATAAAGTCCACCTTATaGAGCTTCATGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVIKSTL*SFMLSW
Trigger: CCAAGACAACATGAAGCTCCATAAGGTGGACTTTAT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR GCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCAGATCATAAAAAGATaGATCAATCTGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVQIIKR*INLSGR
Trigger: CCTTCCTGACAGATTGATGCATCTTTTTATGATCTG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CCA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGAGTATTTTTCCCCCTaGGATGAATTTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: IHISGFIPRSSESEFLVVEYFSP*DEFPHK
Trigger: TTTATGAGGAAATTCATCCCAGGGGGAAAAATACTC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp TGGCCGCAGCCCTTGGCCACCATGACGCTGGCGCCGAGGTCCCGGTaGGCGCTGGCCGCCAGCCCGAAGAGCAGCACGTGGAGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: WPQPLATMTLAPRSR*ALAASPKSSTWRPA
Trigger: TGCAGGCCTCCACGTGCTGCTCTTCGGGCTGGCGGCCAGCGCGCACCGGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 90 bp CCGGTGCGCGCTGGCCGCCAGCCCGAAGAGCAGCACGTGGAGGCCTaGATAGGTGGCCAGGCAGAACAGCTGGCTGCGGTGGTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: PVRAGRQPEEQHVEA*IGGQAEQLAAVVVP
Trigger: TGGCACAACCACCGCAGCCAGCTGTTCTGCCTGGCCACCTATGCAGGCCTCCACGTGCTGCTCTTCGGGCTGGCGGCCAGCGCGCACCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CCA 90 bp CGCTGGCCGCCAGCCCGAAGAGCAGCACGTGGAGGCCTGCATAGGTaGCCAGGCAGAACAGCTGGCTGCGGTGGTTGTGCCAGTAGGCGC +
Preference number: 5 (lower is better)
Translates to: RWPPARRAARGGLHR*PGRTAGCGGCASRR
Trigger: GCGCCTACTGGCACAACCACCGCAGCCAGCTGTTCTGCCTGGCCACCTATGCAGGCCTCCACGTGCTGCTCTTCGGGCTGGCGGCCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CCA 90 bp CCGTTGCCGTCCGCGTCGGCCGATTCGAAGAGCGCCAGCGTCAGCTaGTCCAGCTTCTCGTCAGGCAGCGAGATGGCGCTCTCGCGCAGA +
Preference number: 5 (lower is better)
Translates to: PLPSASADSKSASVS*SSFSSGSEMALSRR
Trigger: TCTGCGCGAGAGCGCCATCTCGCTGCCTGACGAGAAGCTGGACCAGCTGACGCTGGCGCTCTTCGAATCGGCCGACGCGGACGGCAACGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS TCA 90 bp TCGGGGAGGCCGAACCGTGTACCCAGCCAATGCCAGGCCTCGTGGTaGGCAGCAGCTCCCAGAACTGGAAAGGGCTGGCCTCCGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SGRPNRVPSQCQASW*AAAPRTGKGWPPPE
Trigger: CTCAGGCGGAGGCCAGCCCTTTCCAGTTCTGGGAGCTGCTGCTCACCACGAGGCCTGGCATTGGCTGGGTACACGGTTCGGCCTCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 90 bp ACGACTGCAGCACAGTGCGCAGCTCATCCGGGTCAATGGAGCCACTaGCTGTCCCGAGTGGGGATGAAGCCCAGTGCGGGCCTGCCCCAG +
Preference number: 5 (lower is better)
Translates to: TTAAQCAAHPGQWSH*LSRVGMKPSAGLPQ
Trigger: CTGGGGCAGGCCCGCACTGGGCTTCATCCCCACTCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS GCA 90 bp TGGGCAGCGCTGATGGTCAGGTTCTCCATGACTCCGGGGAAGCGCTaGAGCTCGTCCCGGAGCTCCTCGAAGGTGATGGCCCCGTTGCCG +
Preference number: 5 (lower is better)
Translates to: WAALMVRFSMTPGKR*SSSRSSSKVMAPLP
Trigger: CGGCAACGGGGCCATCACCTTCGAGGAGCTCCGGGACGAGCTGCAGCGCTTCCCCGGAGTCATGGAGAACCTGACCATCAGCGCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CCA 90 bp CGCGCAGACACGACTGCAGCACAGTGCGCAGCTCATCCGGGTCAATaGAGCCACTGCCTGTCCCGAGTGGGGATGAAGCCCAGTGCGGGC +
Preference number: 5 (lower is better)
Translates to: RADTTAAQCAAHPGQ*SHCLSRVGMKPSAG
Trigger: GCCCGCACTGGGCTTCATCCCCACTCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS CCA 90 bp CTGAGCATCAGCACCGCGATGAAGCTGCAGTCGAAGTTGAGGCACTaGCCGCAGCCCTTGGCCACCATGACGCTGGCGCCGAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LSISTAMKLQSKLRH*PQPLATMTLAPRSR
Trigger: CCGGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTTCATCGCGGTGCTGATGCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS-3UTR CAA 90 bp TCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCAAGCTGCAGTCGAAGTaGAGGCACTGGCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SGTPCSSQAAQAGCASAAKLQSK*RHWPQP
Trigger: GGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTT...GGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS TCA 90 bp GGCTGGGCTCAGGAGGCCGGGATGGCACCTCCAGGCCTGCCAAGGTaGAATGGCCAGTTCTCACTGAGGCCCACTGATCTCCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: GWAQEAGMAPPGLPR*NGQFSLRPTDLPTP
Trigger: TGGGGTGGGGAGATCAGTGGGCCTCAGTGAGAACTGGCCATTTCACCTTGGCAGGCCTGGAGGTGCCATCCCGGCCTCCTGAGCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 90 bp CAGGCAGCGAGATGGCGCTCTCGCGCAGACACGACTGCAGCACAGTaGGCAGCTCATCCGGGTCAATGGAGCCACTGCCTGTCCCGAGTG +
Preference number: 5 (lower is better)
Translates to: QAARWRSRADTTAAQ*AAHPGQWSHCLSRV
Trigger: CACTCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS-3UTR CAA 90 bp GGCATGCTCAGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATCACTGGCCGCAGCCCTaGGCCACCATGACGCTGGCG +
Preference number: 5 (lower is better)
Translates to: GMLRGKDPAGGGPIRPIDHWPQP*ATMTLA
Trigger: CGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTG...ATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCTGAGCATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS CCA 90 bp CGTAGCACTCTGCCATGCGACCGGAACGTCCTGGGGCCACCAGGCTaGGAACCTCAAGGCCGAAAGGGAAGGTGTCAGCGGAGTACCGTC +
Preference number: 5 (lower is better)
Translates to: RSTLPCDRNVLGPPG*EPQGRKGRCQRSTV
Trigger: GACGGTACTCCGCTGACACCTTCCCTTTCGGCCTTGAGGTTCCCAGCCTGGTGGCCCCAGGACGTTCCGGTCGCATGGCAGAGTGCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CCA 90 bp AGAGCGCCAGCGTCAGCTGGTCCAGCTTCTCGTCAGGCAGCGAGATaGCGCTCTCGCGCAGACACGACTGCAGCACAGTGCGCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: RAPASAGPASRQAAR*RSRADTTAAQCAAH
Trigger: ATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTGACGAGAAGCTGGACCAGCTGACGCTGGCGCTCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS GCA 90 bp AGCTTCTCGTCAGGCAGCGAGATGGCGCTCTCGCGCAGACACGACTaGAGCACAGTGCGCAGCTCATCCGGGTCAATGGAGCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: SFSSGSEMALSRRHD*STVRSSSGSMEPLP
Trigger: AGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTGACGAGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS GCA 90 bp AGCTTCTCGTCAGGCAGCGAGATGGCGCTCTCGCGCAGACACGACTaGAGCACAGTGCGCAGCTCATCCGGGTCAATGGAGCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: SFSSGSEMALSRRHD*STVRSSSGSMEPLP
Trigger: TGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTGACGAGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000448182.7
ENST00000455873.7
ENST00000530406.6
CDS-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGTGTGTCTCCAACAGGTaGGCCCAGAGCCAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: YRAQRGSEGRARREGDGECVSNR*AQSQSR
Trigger: CCGAGACTGGCTCTGGGCCAACCTGTTGGAGACACA...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp CAGGCAGCGAGATGGCGCTCTCGCGCAGACACGACTGCAGCACAGTaGGCAGCTCATCCGGGTCAATGGAGCCACTGCCATCGATGTCAT +
Preference number: 5 (lower is better)
Translates to: QAARWRSRADTTAAQ*AAHPGQWSHCHRCH
Trigger: ATGACATCGATGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000448182.7
ENST00000455873.7
ENST00000530406.6
CDS-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGGATGATTGGGCAGGTTaGGGACCATGGATGTGGGGG +
Preference number: 5 (lower is better)
Translates to: YRAQRGSEGRARREGDGEDDWAG*GPWMWG
Trigger: CCCCCACATCCATGGTCCCAAACCTGCCCAATCATC...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCAGGAAGCGGCCGTATaGAGCCTCCTCGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRQEAAV*SLLGLV
Trigger: GACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCTG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCCAGGTCTCCTGGCCTaGCTGACTCCCAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFPGLLA*LTPSPG
Trigger: CCCTGGACTGGGAGTCAGCAAGGCCAGGAGACCTGG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp GGAGTGACCTTCGCAGTCATCCAGGCTGAAAGCATGGGAAGGACGTaGCCACATTCCCACAGAGCTCGGGTAGAGCCTGGGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: GVTFAVIQAESMGRT*PHSHRARVEPGSPA
Trigger: AGCAGGAGACCCAGGCTCTACCCGAGCTCTGTGGGAATGTGGGCACGTCCTTCCCATGCTTTCAGCCTGGATGACTGCGAAGGTCACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525163.5
CDS-3UTR CAA 90 bp CCACTTTCTGGAACACCTTGCTCCAGTCAGGCCGCCCAGGCTGGGTGCGCGTCTAGTGGGTCTGATGCCTaGAAGGACTCATACAGCCTG +
Preference number: 5 (lower is better)
Translates to: PLSGTPCSSQAAQAGCASSGSDA*KDSYSL
Trigger: CAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACT...AGACGCGCACCCAGCCTGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TCAGGCCGCCCAGGCTGGGTGCGCGTCTGCAGCCCCGTGATGGAGTCTTTCTTCGCCCTTGGACGACCTTaGACTCTTTCTCATTGTCAC +
Preference number: 5 (lower is better)
Translates to: SGRPGWVRVCSPVMESFFALGRP*TLSHCH
Trigger: GTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGGC...GAAGAAAGACTCCATCACGGGGCTGCAGACGCGCACCCAGCCTGGGCGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTGTTTGGAGGAGTGGTaGCCCTCTGCCCCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGCLEEW*PSAPSN
Trigger: GTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAACA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCAGGGAGATGGAGGCTaGGTGCAAGCACGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSQGDGG*VQARAP
Trigger: CGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCTG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGTTAAACACGATCTGGTaGGAAGGCCCCAACACCAGG +
Preference number: 5 (lower is better)
Translates to: YRAQRGSEGRARREGDGELNTIW*EGPNTR
Trigger: CCTGGTGTTGGGGCCTTCCAACCAGATCGTGTTTAA...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCCAGAGGGCAAAGGTTaGTCCACTGTGTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPPEGKG*STVSPT
Trigger: TGTTGGAGACACAGTGGACAAACCTTTGCCCTCTGG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCATTAGGGCAGCCCTTTaGGGGCCATGGCTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFIRAAL*GPWLGG
Trigger: GCCACCCAGCCATGGCCCCAAAAGGGCTGCCCTAAT...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp ACATCTCCTGGGCTGGAAGCCAGGTCTAAGTGGCTCCCACTCCAGTaGTCTTTCCACATCCTGTGCTCTCAGCACCAGTCTGGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: TSPGLEARSKWLPLQ*SFHILCSQHQSGES
Trigger: GCTCTCCCCAGACTGGTGCTGAGAGCACAGGATGTGGAAAGAGCACTGGAGTGGGAGCCACTTAGACCTGGCTTCCAGCCCAGGAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529367.1
CDS-3UTR CAA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCAGCTGCTTTGAATTCTaGCAGGCTGATCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPSCFEF*QADLPI
Trigger: GATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGCT...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATGCCGATGCCTGCCCCGATGAGCACGGCATGCTCAGAGGCAAAGATCCTGCGGGACCGCTGGTCTCTGTaGATCCAGATAAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: MPMPAPMSTACSEAKILRDRWSL*IQIKST
Trigger: GGTGGACTTTATCTGGATCAACAGAGACCAGCGGTC...CCGCAGGATCTTTGCCTCTGAGCATGCCGTGCTCATCGGGGCAGGCATCGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TCGGCCTGGTCCATCTCCAGTTTAGTCAGCAGGCTCACAAACCACTCGAAAGACCAGGAAGCGGCCGTATaGAGCCTCCTCGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SAWSISSLVSRLTNHSKDQEAAV*SLLGLV
Trigger: GACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCTG...GTCTTTCGAGTGGTTTGTGAGCCTGCTGACTAAACTGGAGATGGACCAGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGGCCTTCATGTCATTCTaGCCCAGTGCAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: YRAQRGSEGRARREGDGEAFMSF*PSADVM
Trigger: CATGACATCTGCACTGGGCAAGAATGACATGAAGGC...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGTCTTTACCTCCCCCTTaGCAACCATGGACTTCCAAC +
Preference number: 5 (lower is better)
Translates to: YRAQRGSEGRARREGDGESLPPP*QPWTSN
Trigger: GTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGA...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCGAATTAGCCTCTCCTaGACTGCAGGCCCCACTCCT +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGRISLS*TAGPTP
Trigger: AGGAGTGGGGCCTGCAGTCAAGGAGAGGCTAATTCG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGAGTTTCCCTGGTGAGTaGTGTGCCTCCCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGSFPGE*CASPGL
Trigger: CAAGCCTGGGGAGGCACACAACTCACCAGGGAAACT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGCCCCAGAGAGCGTTTaGTCCAAGCCTTCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVAPESV*SKPSQA
Trigger: GGCTTGGGAAGGCTTGGACAAAACGCTCTCTGGGGC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGCTGGCCTTGGGGAGTTaGCAGCTTCATGGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRLALGS*QLHGGG
Trigger: TCCTCCCCCATGAAGCTGCAAACTCCCCAAGGCCAG...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCATCCCCAGGCACTTGGCCTTTCCACGACAGAGAGAGGCACACAAAGAGGCTGCTGGCCTTGGGGAGTTaGCAGCTTCATGGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SSPGTWPFHDRERHTKRLLALGS*QLHGGG
Trigger: TCCTCCCCCATGAAGCTGCAAACTCCCCAAGGCCAG...CAGCCTCTTTGTGTGCCTCTCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGTGTGTCTCCAACAGGTaGGCCCAGAGCCAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRCVSNR*AQSQSR
Trigger: CCGAGACTGGCTCTGGGCCAACCTGTTGGAGACACA...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp AGTGACCTTGGAGGGGAGGAGGTTGACTTCCATGATGCACACGGCTaGCATGCGGGACACTGCCAGTCCGATGGCCTTCTCCAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: SDLGGEEVDFHDAHG*HAGHCQSDGLLQEK
Trigger: TTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGTCCCGCATGGCAGCCGTGTGCATCATGGAAGTCAACCTCCTCCCCTCCAAGGTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGACTCATACAGCCTGTTaGTCCACTGGCCTTGGGACC +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGTHTAC*STGLGT
Trigger: GGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTTCATCCCCAGGCACTaGGCCTTTCCACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGFIPRH*AFPRQR
Trigger: TCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGAA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGCCCATGATGGCAGCCTaGGGGAAGGGTGCTTTACAC +
Preference number: 5 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVPMMAA*GKGALH
Trigger: GTGTAAAGCACCCTTCCCCAAGGCTGCCATCATGGG...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTCCTCAGGGTATGTTTaGCCTTCCCCTTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFSSGYV*PSPSQG
Trigger: GCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGGA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CCACCCAACTGGCTCATCCCCTGCAGGTCACACCCACCCCTACTGCTGCATCCCCCTGTTCAGTTCAACTaGACCTCACCGATGGACATT +
Preference number: 5 (lower is better)
Translates to: PPNWLIPCRSHPPLLLHPPVQFN*TSPMDI
Trigger: AATGTCCATCGGTGAGGTCAAGTTGAACTGAACAGG...GGGATGCAGCAGTAGGGGTGGGTGTGACCTGCAGGGGATGAGCCAGTTGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp GGAGCCACCTGGCATCCTCCTCGGCACTCATGGTGCACGAGGGTCTaGGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACCCACCAATT +
Preference number: 5 (lower is better)
Translates to: GATWHPPRHSWCTRV*GFILEVSETKNPPI
Trigger: AATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGCAGACCCTCGTGCACCATGAGTGCCGAGGAGGATGCCAGGTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS GCA 90 bp GAGGAGGTTGACTTCCATGATGCACACGGCTGCCATGCGGGACACTaGCAGTCCGATGGCCTTCTCCAGGAAAAACAAGATTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: EEVDFHDAHGCHAGH*QSDGLLQEKQDSRH
Trigger: GTGCCTGGAATCTTGTTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGTCCCGCATGGCAGCCGTGTGCATCATGGAAGTCAACCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CCA 90 bp CTCGGCACTCATGGTGCCTCTACAGCCTTCAGGGCCCGTCTGGGCTaGGTCTCCAGATGTGTTCATCTTCTCCTGTCTTCTAGATCACAG +
Preference number: 5 (lower is better)
Translates to: LGTHGASTAFRARLG*VSRCVHLLLSSRSQ
Trigger: CTGTGATCTAGAAGACAGGAGAAGATGAACACATCTGGAGACCCAGCCCAGACGGGCCCTGAAGGCTGTAGAGGCACCATGAGTGCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388866.8
ENST00000530406.6
CDS CCA 90 bp TCCTCCTCGGCACTCATGGTGCCTCTACAGCCTTCAGGGCCCGTCTaGGCTGGGTCTCCAGATGTGTTCATCTTCTCCTGTCTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: SSSALMVPLQPSGPV*AGSPDVFIFSCLLD
Trigger: ATCTAGAAGACAGGAGAAGATGAACACATCTGGAGACCCAGCCCAGACGGGCCCTGAAGGCTGTAGAGGCACCATGAGTGCCGAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388866.8
ENST00000530406.6
CDS-3UTR CAA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAAAGGTGATGGCCCCGTaGCCGTCCGCGTCGGCCGAT +
Preference number: 5 (lower is better)
Translates to: VSCHLTATVTDGWHQLISKVMAP*PSASAD
Trigger: ATCGGCCGACGCGGACGGCAACGGGGCCATCACCTT...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTCACTGGCCGCAGCCCTaGGCCACCATGACGCTGGCG +
Preference number: 5 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPHWPQP*ATMTLA
Trigger: CGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTG...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTGCAGAGTTTGTCCACTGGCCTaGGGACCGAATGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VKGHLQANGLHVILAQCRVCPLA*GPNVQP
Trigger: TGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAAC...TCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGACTCATACAGCCTGTTaGTCCACTGGCCTTGGGACC +
Preference number: 5 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRTHTAC*STGLGT
Trigger: GGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGAGTCTTTCTTCTCCTaGTTGGCCAGGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGESFFS*LARRSR
Trigger: CCTTGACCTCCTGGCCAACAAGGAGAAGAAAGACTC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGGAGTCTTTCTTCTCCTaGTTGGCCAGGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGESFFS*LARRSR
Trigger: CCTTGACCTCCTGGCCAACAAGGAGAAGAAAGACTC...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTGTATGCCCACGGCCTCCACAGTCCTTCTGGACTAGTTTTGGGCCTAGACAGGAAGAAGACCTGCACCTaGCCCTTCTTCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VYAHGLHSPSGLVLGLDRKKTCT*PFFSAA
Trigger: GGCTGCTGAGAAGAAGGGCAAGGTGCAGGTCTTCTT...CCTGTCTAGGCCCAAAACTAGTCCAGAAGGACTGTGGAGGCCGTGGGCATACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGACCCATGGTGTGGACTaGGGGCAGAGCTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAATHGVD*GQSLER
Trigger: CCTCTCCAAGCTCTGCCCCAAGTCCACACCATGGGT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGACCATCCCCTTCCTATaGCCCCTTTCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGTIPFL*PLSEES
Trigger: GCTCTCTTCTGAAAGGGGCAATAGGAAGGGGATGGT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTCGAATTAGCCTCTCCTaGACTGCAGGCCCCACTCCT +
Preference number: 5 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSRISLS*TAGPTP
Trigger: AGGAGTGGGGCCTGCAGTCAAGGAGAGGCTAATTCG...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCGGGAAACAAACCCGCTaGAGATCCGTGATTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGGKQTR*RSVILQ
Trigger: CTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCC...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTCCCCATGTCTGGCCTaGGGGAGTTTGCAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSPCLA*GSLQLH
Trigger: ATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGCATTTAAGTAACCCCTaGCCCTGGGAGGAACCGACA +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGHLSNP*PWEEPT
Trigger: TGTCGGTTCCTCCCAGGGCAAGGGGTTACTTAAATG...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCCTACCTTCAACCTaGTCTGCCAGCCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSLPST*SASLVT
Trigger: AGTCACCAGGCTGGCAGACAAGGTTGAAGGTAGGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TACAGAGCCCAGAGAGGCTCTGAGGGACGCGCCAGGAGAGAGGGAGATGGGGAGACTACCTGTCTTTCTTaGTTTCTCCAGCAGGCTACA +
Preference number: 5 (lower is better)
Translates to: YRAQRGSEGRARREGDGETTCLS*FLQQAT
Trigger: TGTAGCCTGCTGGAGAAACAAAGAAAGACAGGTAGT...CTCCCCATCTCCCTCTCTCCTGGCGCGTCCCTCAGAGCCTCTCTGGGCTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS TCA 90 bp TGTCACACTCCTCGACAGCCTCTTAGAACCACGGCCCAGTGGGTCTaGTGCCTTGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: CHTPRQPLRTTAQWV*CLEGLIQPVCPLAL
Trigger: CAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGTGGTTCTAAGAGGCTGTCGAGGAGTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGGTTTGTCCACTGGCCTaGGGACCGAATGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAVCPLA*GPNVQP
Trigger: TGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAAC...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGAGTGGGTCTGATGCCTaGAAGGACTCATACAGCCTG +
Preference number: 5 (lower is better)
Translates to: CARLWVPMSGLGEFAASWSGSDA*KDSYSL
Trigger: CAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGACCGCTGGTCTCTGTaGATCCAGATAAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVDRWSL*IQIKST
Trigger: GGTGGACTTTATCTGGATCAACAGAGACCAGCGGTC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCATTCTTGCCCAGTGCAGATGTCATGTACATATGCAGCTCCAGGAAGCGGCCGACTTTCTGGAACACCTaGCTCCAGTCAGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: SFLPSADVMYICSSRKRPTFWNT*LQSGRP
Trigger: TGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT...CGGCCGCTTCCTGGAGCTGCATATGTACATGACATCTGCACTGGGCAAGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGTCCGTCGGAAAATGTTaGGAGGAGTGGTTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVSVGKC*EEWLPS
Trigger: AGAGGGCAACCACTCCTCCAAACATTTTCCGACGGA...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCCAGGTCTCCTGGCCTaGCTGACTCCCAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAPGLLA*LTPSPG
Trigger: CCCTGGACTGGGAGTCAGCAAGGCCAGGAGACCTGG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCGAACAGCTGACTATTaGTATATGCGGGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: CARLWVPMSGLGEFAASWRTADY*YMRVGA
Trigger: GGCTCCCACCCGCATATACAAATAGTCAGCTGTTCG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCCAGCCCCTTTCCCTTaGATTAACTGCCACTCACGG +
Preference number: 5 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPPAPFP*INCHSR
Trigger: CCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTATTAATAGCCTGCACTaGTGCCGCTCGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPINSLH*CRSSRR
Trigger: CCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAAT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTATTAATAGCCTGCACTaGTGCCGCTCGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSINSLH*CRSSRR
Trigger: CCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAAT...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS TCA 90 bp TTCCAGGCACCAGCAGCCACTTCCAGAAGTTGGGCCCATGAAAGATaGGCAGAAGCCACACGAGGAGGTAGGACAGGTGAGTCCAATAGA +
Preference number: 5 (lower is better)
Translates to: FQAPAATSRSWAHER*AEATRGGRTGESNR
Trigger: TCTATTGGACTCACCTGTCCTACCTCCTCGTGTGGCTTCTGCTCATCTTTCATGGGCCCAACTTCTGGAAGTGGCTGCTGGTGCCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 90 bp CAGAGCTGCTTTGAATTCTTGCAGGCTGATCTCCCCATCTTCTCCTaGAATGGTCTTAAACTGCTGAGTCACCCACCGGAGCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: QSCFEFLQADLPIFS*NGLKLLSHPPEPPG
Trigger: GCCAGGTGGCTCCGGTGGGTGACTCAGCAGTTTAAGACCATTGCAGGAGAAGATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CCA 90 bp CCAGCCCACACCCAGGAAGAGCCCTTACCATCGATGTCATACACCTaGAAGAGGAATTTGAGTTTGTCCATGGGGCTGCCATGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PAHTQEEPLPSMSYT*KRNLSLSMGLPWMS
Trigger: GCTCATCCATGGCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGGTAAGGGCTCTTCCTGGGTGTGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 90 bp AGCTCAGAAACCTTCCATGTTCCCGACTGCCTAGCTCAACAGCAATaGACACCTCCCCACGGGTGGAGAATCTTTGGCTTCAGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSETFHVPDCLAQQQ*TPPHGWRIFGFSGC
Trigger: GCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGCTGTTGAGCTAGGCAGTCGGGAACATGGAAGGTTTCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 90 bp AGTGGGTCTGATGCCTTGAAGGACTCATACAGCCTGTTTGTCCACTaGCCTTGGGACCGAATGTGCAGCCAGATAGTGTCTTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: SGSDALKDSYSLFVH*PWDRMCSQIVSWRG
Trigger: TCCCCTCCAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGACCTGGAAGAGGAATTaGAGTTTGTCCATGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CARLWVPMSGLGEFAASWTWKRN*SLSMGL
Trigger: CAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGT...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACAGCTGACTATTTGTATATGCGGGTGGGAGCCTGGTGGAAATCTGTTACGAGAAAGCTGCAGTCGAAGTaGAGGCACTGGCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TADYLYMRVGAWWKSVTRKLQSK*RHWPQP
Trigger: GGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTT...TCTCGTAACAGATTTCCACCAGGCTCCCACCCGCATATACAAATAGTCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTCTTTTCTGGTACTCATACAGCCTGTTaGTCCACTGGCCTTGGGACC +
Preference number: 5 (lower is better)
Translates to: HLRSRSAGSWGKYAFFSGTHTAC*STGLGT
Trigger: GGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGT...ACCAGAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGTGGGTCTGATGCCTaGAAGGACTCATACAGCCTG +
Preference number: 5 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPSGSDA*KDSYSL
Trigger: CAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCTTTGACTCTTTCTCATaGTCACACTCCTCGACAGCC +
Preference number: 5 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGFDSFS*SHSSTA
Trigger: GGCTGTCGAGGAGTGTGACAATGAGAAAGAGTCAAA...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGCCCTTGGACGACCTTaGACTCTTTCTCATTGTCAC +
Preference number: 5 (lower is better)
Translates to: LPGKQTRLRSVILQRPLVALGRP*TLSHCH
Trigger: GTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGGC...CACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGAGCTTCATGTTGTCTaGGACACCTTCGATCCAGGA +
Preference number: 5 (lower is better)
Translates to: CARLWVPMSGLGEFAASWELHVV*DTFDPG
Trigger: TCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGGCCTTCATGTCATTCTaGCCCAGTGCAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: CARLWVPMSGLGEFAASWAFMSF*PSADVM
Trigger: CATGACATCTGCACTGGGCAAGAATGACATGAAGGC...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCTAGGCTTTGTCTTATaGGGTGGGTCATCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFLGFVL*GGSSEA
Trigger: AGCCTCAGATGACCCACCCAATAAGACAAAGCCTAG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCGATGATTGGGCAGGTTaGGGACCATGGATGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTDDWAG*GPWMWG
Trigger: CCCCCACATCCATGGTCCCAAACCTGCCCAATCATC...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCTGTGCCTCCCCAGGCTaGCTGGAAATTAAACACGAT +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFCASPG*LEIKHD
Trigger: ATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCACA...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCAGTTTCCCTGGTGAGTaGTGTGCCTCCCCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTSFPGE*CASPGL
Trigger: CAAGCCTGGGGAGGCACACAACTCACCAGGGAAACT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTGCTAGGCTTTGGGTCCCCATGTCTGGCCTTGGGGAGTTTGCAGCTTCATGGCCTTCTGGACTAGTTTaGGGCCTAGACAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: CARLWVPMSGLGEFAASWPSGLV*GLDRAF
Trigger: AAATGCCCTGTCTAGGCCCAAAACTAGTCCAGAAGG...CCATGAAGCTGCAAACTCCCCAAGGCCAGACATGGGGACCCAAAGCCTAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS CCA 90 bp CACCAATTCCAGATACAACATGACTGCATACCAGCCTGGGCGCAATaGATTGAGACCTCGGATAAGCCGGCACAGACGAAGGCCATAGCA +
Preference number: 5 (lower is better)
Translates to: HQFQIQHDCIPAWAQ*IETSDKPAQTKAIA
Trigger: TGCTATGGCCTTCGTCTGTGCCGGCTTATCCGAGGTCTCAATCCATTGCGCCCAGGCTGGTATGCAGTCATGTTGTATCTGGAATTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CCA 90 bp CCAAGAACCCACCAATTCCAGATACAACATGACTGCATACCAGCCTaGGCGCAATGGATTGAGACCTCGGATAAGCCGGCACAGACGAAG +
Preference number: 5 (lower is better)
Translates to: PRTHQFQIQHDCIPA*AQWIETSDKPAQTK
Trigger: CTTCGTCTGTGCCGGCTTATCCGAGGTCTCAATCCATTGCGCCCAGGCTGGTATGCAGTCATGTTGTATCTGGAATTGGTGGGTTCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CCA 90 bp CCTAGCTCAACAGCAATGGACACCTCCCCACGGGTGGAGAATCTTTaGCTTCAGTGGTTGCCTGTCTCCAGAATCGGTAACTCCCTAAGT +
Preference number: 5 (lower is better)
Translates to: PSSTAMDTSPRVENL*LQWLPVSRIGNSLS
Trigger: ACTTAGGGAGTTACCGATTCTGGAGACAGGCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGCTGTTGAGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTAGCTGCTTTGAATTCTaGCAGGCTGATCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPSCFEF*QADLPI
Trigger: GATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGCT...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATGTTGTCTTGGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCGAGCTTCATGTTGTCTaGGACACCTTCGATCCAGGA +
Preference number: 5 (lower is better)
Translates to: MLSWTPSIQECWQLGQVCELHVV*DTFDPG
Trigger: TCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTC...GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp GTCAAGGGCCATCTGCAGGCCAATGGCCTTCATGTCATTCTTGCCCAGTGCAGAGCCTTCATGTCATTCTaGCCCAGTGCAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: VKGHLQANGLHVILAQCRAFMSF*PSADVM
Trigger: CATGACATCTGCACTGGGCAAGAATGACATGAAGGC...TCTGCACTGGGCAAGAATGACATGAAGGCCATTGGCCTGCAGATGGCCCTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TGGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTCTTTTCGAGTCTTTCTTCTCCTaGTTGGCCAGGAGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: WTPSIQECWQLGQVCFLFESFFS*LARRSR
Trigger: CCTTGACCTCCTGGCCAACAAGGAGAAGAAAGACTC...GAAAAGAAAGCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCCAGCTACAATCCCATaGGAAAGTGCCTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPPATIP*ESAWFQ
Trigger: TTGGAACCAGGCACTTTCCAATGGGATTGTAGCTGG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCAGGGAGATGGAGGCTaGGTGCAAGCACGAGCCCCG +
Preference number: 5 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTQGDGG*VQARAP
Trigger: CGGGGCTCGTGCTTGCACCAAGCCTCCATCTCCCTG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTGGACCTGTGAACTCTTGTGCCTCCCCAGGCTaGCTGGAAATTAAACACGAT +
Preference number: 5 (lower is better)
Translates to: LPSMTCPPRQTEPGPVNSCASPG*LEIKHD
Trigger: ATCGTGTTTAATTTCCAGCAAGCCTGGGGAGGCACA...AGAGTTCACAGGTCCAGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACATGTGTGGTCCTGCTGCCTTCGATGACATGTCCACCGAGGCAGACAGAACCTCATTCAAGTCCTCCTTaGCCTCCTCCACAGTTAACC +
Preference number: 5 (lower is better)
Translates to: TCVVLLPSMTCPPRQTEPHSSPP*PPPQLT
Trigger: GGTTAACTGTGGAGGAGGCAAAGGAGGACTTGAATG...AGGTTCTGTCTGCCTCGGTGGACATGTCATCGAAGGCAGCAGGACCACACATGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCCTCTCGTGGGACTACCTGTCTTTCTTaGTTTCTCCAGCAGGCTACA +
Preference number: 5 (lower is better)
Translates to: SWETNPLEIRDSAAPSRGTTCLS*FLQQAT
Trigger: TGTAGCCTGCTGGAGAAACAAAGAAAGACAGGTAGT...CCCACGAGAGGGCGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS CCA 90 bp TCTGATGCCTTGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTTaGGACCGAATGTGCAGCCAGATAGTGTCTTTCTGCTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SDALKDSYSLFVHWP*DRMCSQIVSFCSGA
Trigger: TGCTCCTGAGCAGAAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CCA 90 bp AGTGGGTCTGATGCCTTGAAGGACTCATACAGCCTGTTTGTCCACTaGCCTTGGGACCGAATGTGCAGCCAGATAGTGTCTTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SGSDALKDSYSLFVH*PWDRMCSQIVSFCS
Trigger: TGAGCAGAAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCAAGCTGCAGTCGAAGTaGAGGCACTGGCCGCAGCCC +
Preference number: 5 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTKLQSK*RHWPQP
Trigger: GGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATGTTGTCTTGGACACCTTCGATCCAGGAGTGCTGGCAGCTGGGGCAAGTATGCTTTGACTCTTTCTCATaGTCACACTCCTCGACAGCC +
Preference number: 5 (lower is better)
Translates to: MLSWTPSIQECWQLGQVCFDSFS*SHSSTA
Trigger: GGCTGTCGAGGAGTGTGACAATGAGAAAGAGTCAAA...GCATACTTGCCCCAGCTGCCAGCACTCCTGGATCGAAGGTGTCCAAGACAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGTTATGGAGCTTCATGTaGTCTTGGACACCTTCGATC +
Preference number: 5 (lower is better)
Translates to: CINSLHLCRSSRRALPDWLWSFM*SWTPSI
Trigger: GATCGAAGGTGTCCAAGACAACATGAAGCTCCATAA...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp AGAGGCAAAGATCCTGCGGGTGGGGGTCCCATAAGGCCCATCGATGTAGCACTTTTATGGAGCTTCATGTaGTCTTGGACACCTTCGATC +
Preference number: 5 (lower is better)
Translates to: RGKDPAGGGPIRPIDVALLWSFM*SWTPSI
Trigger: GATCGAAGGTGTCCAAGACAACATGAAGCTCCATAA...AAGTGCTACATCGATGGGCCTTATGGGACCCCCACCCGCAGGATCTTTGCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAACTTTCTGGAACACCTaGCTCCAGTCAGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: VSCHLTATVTDGWHQLISTFWNT*LQSGRP
Trigger: TGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTGGAAAAATCTGAAGCCGAACTTCTCACAATGGCCCTTCAGCACCTTGGCCAGAAGAAGACCTGCACCTaGCCCTTCTTCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LEKSEAELLTMALQHLGQKKTCT*PFFSAA
Trigger: GGCTGCTGAGAAGAAGGGCAAGGTGCAGGTCTTCTT...CTGGCCAAGGTGCTGAAGGGCCATTGTGAGAAGTTCGGCTTCAGATTTTTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCTAGGCTTTGTCTTATaGGGTGGGTCATCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAALGFVL*GGSSEA
Trigger: AGCCTCAGATGACCCACCCAATAAGACAAAGCCTAG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTGTTTGGAGGAGTGGTaGCCCTCTGCCCCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RILESYVQVLPPAPTHYICLEEW*PSAPSN
Trigger: GTTCGAGGGGGCAGAGGGCAACCACTCCTCCAAACA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCTCCGTCGGAAAATGTTaGGAGGAGTGGTTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTSVGKC*EEWLPS
Trigger: AGAGGGCAACCACTCCTCCAAACATTTTCCGACGGA...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTGGGGAGTTTGCAGCTTCATGGGGGAGGATGGGCACACGTGCCGATAACTGGCACGTTTCCAAATGATTaGGCACAGCCTGTTTACATC +
Preference number: 5 (lower is better)
Translates to: LGSLQLHGGGWAHVPITGTFPND*AQPVYI
Trigger: GATGTAAACAGGCTGTGCCAAATCATTTGGAAACGT...GCCAGTTATCGGCACGTGTGCCCATCCTCCCCCATGAAGCTGCAAACTCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCACTTTGGAACAGGGCGTaGTCTTCCCAGCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: VSCHLTATVTDGWHQLISLWNRA*SSQPLS
Trigger: GGAAAGGGGCTGGGAAGACAACGCCCTGTTCCAAAG...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCATTCAAGTCCTCCTTaGCCTCCTCCACAGTTAACC +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAHSSPP*PPPQLT
Trigger: GGTTAACTGTGGAGGAGGCAAAGGAGGACTTGAATG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCTTCTGGACTAGTTTaGGGCCTAGACAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAPSGLV*GLDRAF
Trigger: AAATGCCCTGTCTAGGCCCAAAACTAGTCCAGAAGG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCATTAGGGCAGCCCTTTaGGGGCCATGGCTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTIRAAL*GPWLGG
Trigger: GCCACCCAGCCATGGCCCCAAAAGGGCTGCCCTAAT...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TGTATTAATAGCCTGCACTTGTGCCGCTCGTCCAGGAGGGCCCTGCCTGATTGGAGCAGACTCAGGAGTTaGATGGCTATAATAGGAGAG +
Preference number: 5 (lower is better)
Translates to: CINSLHLCRSSRRALPDWSRLRS*MAIIGE
Trigger: CTCTCCTATTATAGCCATCAAACTCCTGAGTCTGCT...CCAATCAGGCAGGGCCCTCCTGGACGAGCGGCACAAGTGCAGGCTATTAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp AAGTCAGTGAGACCAAGAACCCACCAATTCCAGATACAACATGACTaGATACCAGCCTGGGCGCAATGGATTGAGACCTCGGATAAGCCG +
Preference number: 5 (lower is better)
Translates to: KSVRPRTHQFQIQHD*IPAWAQWIETSDKP
Trigger: CGGCTTATCCGAGGTCTCAATCCATTGCGCCCAGGCTGGTATGCAGTCATGTTGTATCTGGAATTGGTGGGTTCTTGGTCTCACTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CCA 90 bp ACAGCAATGGACACCTCCCCACGGGTGGAGAATCTTTGGCTTCAGTaGTTGCCTGTCTCCAGAATCGGTAACTCCCTAAGTACTACTCAA +
Preference number: 5 (lower is better)
Translates to: TAMDTSPRVENLWLQ*LPVSRIGNSLSTTQ
Trigger: TTGAGTAGTACTTAGGGAGTTACCGATTCTGGAGACAGGCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS-3UTR CAA 90 bp CAGGTTATGATCCGGCTTCTTTACCTCCCCCTTTGCAACCATGGACTTCCAACCAAGAGGAATTTGAGTTaGTCCATGGGGCTGCCATGG +
Preference number: 5 (lower is better)
Translates to: QVMIRLLYLPLCNHGLPTKRNLS*SMGLPW
Trigger: CCATGGCAGCCCCATGGACAAACTCAAATTCCTCTT...GGTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGAAGCCGGATCATAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCTTCATCCCCAGGCACTaGGCCTTTCCACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAFIPRH*AFPRQR
Trigger: TCTCTGTCGTGGAAAGGCCAAGTGCCTGGGGATGAA...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCACGTTTCCAAATGATTaGGCACAGCCTGTTTACATC +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFTFPND*AQPVYI
Trigger: GATGTAAACAGGCTGTGCCAAATCATTTGGAAACGT...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCCCAGCCCCTTTCCCTTaGATTAACTGCCACTCACGG +
Preference number: 5 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAPAPFP*INCHSR
Trigger: CCGTGAGTGGCAGTTAATCAAAGGGAAAGGGGCTGG...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCTGGAGCCTGGAGGTTTaGCCTCTAGTGGGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAWSLEV*PLVGSF
Trigger: AAAGCTCCCCACTAGAGGCAAAACCTCCAGGCTCCA...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCATGGAGCCTGGAGGTTTaGCCTCTAGTGGGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VSCHLTATVTDGWHQLISWSLEV*PLVGSF
Trigger: AAAGCTCCCCACTAGAGGCAAAACCTCCAGGCTCCA...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCCTGTTCAGTTCAACTaGACCTCACCGATGGACATT +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAPVQFN*TSPMDI
Trigger: AATGTCCATCGGTGAGGTCAAGTTGAACTGAACAGG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS CCA 90 bp TTTATATATAGAAAGACATCTCCTGGGCTGGAAGCCAGGTCTAAGTaGCTCCCACTCCAGTGCTCTTTCCACATCCTGTGCTCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: FIYRKTSPGLEARSK*LPLQCSFHILCSQH
Trigger: GTGCTGAGAGCACAGGATGTGGAAAGAGCACTGGAGTGGGAGCCACTTAGACCTGGCTTCCAGCCCAGGAGATGTCTTTCTATATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529367.1
CDS CCA 90 bp GTTTCTGGACTCATCCAGAGGACCAGTCTCCCCCTGGCCCCTTCATaGCCTCTTCTATCTGCTTTAATCTCTCTGTTGGCCAATTTCAAA +
Preference number: 5 (lower is better)
Translates to: VSGLIQRTSLPLAPS*PLLSALISLLANFK
Trigger: TTTGAAATTGGCCAACAGAGAGATTAAAGCAGATAGAAGAGGCCATGAAGGGGCCAGGGGGAGACTGGTCCTCTGGATGAGTCCAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCACTGGCCGCAGCCCTaGGCCACCATGACGCTGGCG +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVHWPQP*ATMTLA
Trigger: CGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCATTAAACACGATCTGGTaGGAAGGCCCCAACACCAGG +
Preference number: 5 (lower is better)
Translates to: VSCHLTATVTDGWHQLISLNTIW*EGPNTR
Trigger: CCTGGTGTTGGGGCCTTCCAACCAGATCGTGTTTAA...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp GTCTCATGTCACCTCACAGCAACTGTGACTGACGGATGGCATCAGCTTATTTCAGGGAAACAAACCCGCTaGAGATCCGTGATTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VSCHLTATVTDGWHQLISGKQTR*RSVILQ
Trigger: CTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCC...TGAAATAAGCTGATGCCATCCGTCAGTCACAGTTGCTGTGAGGTGACATGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTCCCTACCTTCAACCTaGTCTGCCAGCCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: RILESYVQVLPPAPTHYISLPST*SASLVT
Trigger: AGTCACCAGGCTGGCAGACAAGGTTGAAGGTAGGGA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGTTTAAGAGGGCCCATTaGTCCCTGAGTAGTATTAGG +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAFKRAH*SLSSIR
Trigger: CCTAATACTACTCAGGGACAAATGGGCCCTCTTAAA...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGAGCAGACTCAGGAGTTaGATGGCTATAATAGGAGAG +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAASRLRS*MAIIGE
Trigger: CTCTCCTATTATAGCCATCAAACTCCTGAGTCTGCT...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCAAGAGGAATTTGAGTTaGTCCATGGGGCTGCCATGG +
Preference number: 5 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAKRNLS*SMGLPW
Trigger: CCATGGCAGCCCCATGGACAAACTCAAATTCCTCTT...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGAAGGTGATGGCCCCGTaGCCGTCCGCGTCGGCCGAT +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVKVMAP*PSASAD
Trigger: ATCGGCCGACGCGGACGGCAACGGGGCCATCACCTT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp TTTACACTGTCAAGAAGAGAACCTATCAGGACTGACTGCAAGGTGGAGGATGCCGAGCTTCATGTTGTCTaGGACACCTTCGATCCAGGA +
Preference number: 5 (lower is better)
Translates to: FTLSRREPIRTDCKVEDAELHVV*DTFDPG
Trigger: TCCTGGATCGAAGGTGTCCAAGACAACATGAAGCTC...GGCATCCTCCACCTTGCAGTCAGTCCTGATAGGTTCTCTTCTTGACAGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTGACCGCTGGTCTCTGTaGATCCAGATAAAGTCCACC +
Preference number: 5 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPDRWSL*IQIKST
Trigger: GGTGGACTTTATCTGGATCAACAGAGACCAGCGGTC...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTACCATCCCCTTCCTATaGCCCCTTTCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPTIPFL*PLSEES
Trigger: GCTCTCTTCTGAAAGGGGCAATAGGAAGGGGATGGT...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTCGAACAGCTGACTATTaGTATATGCGGGTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: RILESYVQVLPPAPTHYIRTADY*YMRVGA
Trigger: GGCTCCCACCCGCATATACAAATAGTCAGCTGTTCG...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CTCCGTCAGCGCTGTCCTCACAGAACAGTGCAATGGCACCTGGCAAAGTGGTTCCATGTCCAGCCAAATTaGGGTAAATCTCAGAATTTT +
Preference number: 5 (lower is better)
Translates to: LRQRCPHRTVQWHLAKWFHVQPN*GKSQNF
Trigger: AAAATTCTGAGATTTACCCAAATTTGGCTGGACATG...GAACCACTTTGCCAGGTGCCATTGCACTGTTCTGTGAGGACAGCGCTGACGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTGCCCTTGGACGACCTTaGACTCTTTCTCATTGTCAC +
Preference number: 5 (lower is better)
Translates to: RILESYVQVLPPAPTHYIALGRP*TLSHCH
Trigger: GTGACAATGAGAAAGAGTCAAAGGTCGTCCAAGGGC...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCAGGAAGCGGCCGTATaGAGCCTCCTCGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVQEAAV*SLLGLV
Trigger: GACCAGGCCGAGGAGGCTCAATACGGCCGCTTCCTG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTCTTTACCTCCCCCTTaGCAACCATGGACTTCCAAC +
Preference number: 5 (lower is better)
Translates to: RILESYVQVLPPAPTHYISLPPP*QPWTSN
Trigger: GTTGGAAGTCCATGGTTGCAAAGGGGGAGGTAAAGA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCATTTAAGTAACCCCTaGCCCTGGGAGGAACCGACA +
Preference number: 5 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTHLSNP*PWEEPT
Trigger: TGTCGGTTCCTCCCAGGGCAAGGGGTTACTTAAATG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 90 bp TCTGCAAAGAAGGACTCTTTCACATGCAGAGCTGCTTTGAATTCTTaGAGGCTGATCTCCCCATCTTCTCCTGCAATGGTCTTAAACTGC +
Preference number: 5 (lower is better)
Translates to: SAKKDSFTCRAALNS*RLISPSSPAMVLNC
Trigger: GCAGTTTAAGACCATTGCAGGAGAAGATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGCTCTGCATGTGAAAGAGTCCTTCTTTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS-3UTR CAA 90 bp CGGATTTTAGAATCGTATGTCCAAGTCCTTCCACCTGCTCCCACCCACTATATTTTTGACTCTTTCTCATaGTCACACTCCTCGACAGCC +
Preference number: 5 (lower is better)
Translates to: RILESYVQVLPPAPTHYIFDSFS*SHSSTA
Trigger: GGCTGTCGAGGAGTGTGACAATGAGAAAGAGTCAAA...AATATAGTGGGTGGGAGCAGGTGGAAGGACTTGGACATACGATTCTAAAATCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ACCAGTCTCACTTCCTGGGAAACAAACCCGCTTGAGATCCGTGATTCTGCAGCGCATGTCCAGCCAAATTaGGGTAAATCTCAGAATTTT +
Preference number: 5 (lower is better)
Translates to: TSLTSWETNPLEIRDSAAHVQPN*GKSQNF
Trigger: AAAATTCTGAGATTTACCCAAATTTGGCTGGACATG...CGCTGCAGAATCACGGATCTCAAGCGGGTTTGTTTCCCAGGAAGTGAGACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CCCACCTTAGATAAGGGACATCATCATCCAGGTTATGATCCGGCTTCTTTACCTTTATGGAGCTTCATGTaGTCTTGGACACCTTCGATC +
Preference number: 5 (lower is better)
Translates to: PTLDKGHHHPGYDPASLPLWSFM*SWTPSI
Trigger: GATCGAAGGTGTCCAAGACAACATGAAGCTCCATAA...AGGTAAAGAAGCCGGATCATAACCTGGATGATGATGTCCCTTATCTAAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTACCCATGGTGTGGACTaGGGGCAGAGCTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: QIIKRCINLSGRLVNMSITHGVD*GQSLER
Trigger: CCTCTCCAAGCTCTGCCCCAAGTCCACACCATGGGT...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGCCCCAGAGAGCGTTTaGTCCAAGCCTTCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVAPESV*SKPSQA
Trigger: GGCTTGGGAAGGCTTGGACAAAACGCTCTCTGGGGC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGGTTTGTCCACTGGCCTaGGGACCGAATGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVVCPLA*GPNVQP
Trigger: TGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAAC...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGACTTTCTGGAACACCTaGCTCCAGTCAGGCCGCCCA +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVTFWNT*LQSGRP
Trigger: TGGGCGGCCTGACTGGAGCAAGGTGTTCCAGAAAGT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCCCATGATGGCAGCCTaGGGGAAGGGTGCTTTACAC +
Preference number: 5 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIPMMAA*GKGALH
Trigger: GTGTAAAGCACCCTTCCCCAAGGCTGCCATCATGGG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTTCCTCAGGGTATGTTTaGCCTTCCCCTTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QIIKRCINLSGRLVNMSISSGYV*PSPSQG
Trigger: GCCCTGGGAAGGGGAAGGCAAAACATACCCTGAGGA...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGCTTTGGAACAGGGCGTaGTCTTCCCAGCCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVLWNRA*SSQPLS
Trigger: GGAAAGGGGCTGGGAAGACAACGCCCTGTTCCAAAG...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCTTTAAGAGGGCCCATTaGTCCCTGAGTAGTATTAGG +
Preference number: 5 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTFKRAH*SLSSIR
Trigger: CCTAATACTACTCAGGGACAAATGGGCCCTCTTAAA...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp ATACATATTTCAGGTTTCATTCCCAGATCATCAGAATCAGAATTTCTGGTAGTGAAGAAGACCTGCACCTaGCCCTTCTTCTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: IHISGFIPRSSESEFLVVKKTCT*PFFSAA
Trigger: GGCTGCTGAGAAGAAGGGCAAGGTGCAGGTCTTCTT...CACTACCAGAAATTCTGATTCTGATGATCTGGGAATGAAACCTGAAATATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp AGTTTGATGGCTATAATAGGAGAGTCCTCCAAAAAGAAGGTGTGCAGTCAGACCCTAGAGAAACTGACCTaGAACATGAAGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: SLMAIIGESSKKKVCSQTLEKLT*NMKSLD
Trigger: GTCAAGAGACTTCATGTTCAAGGTCAGTTTCTCTAG...GGTCTGACTGCACACCTTCTTTTTGGAGGACTCTCCTATTATAGCCATCAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS CCA 90 bp GCAGTATCTGGGAGAAGGAAATTGCATATACATGGAAATTCTCATTaGTGTTGTGATCATCATTCCGGCCCAAATCACATTACGATGCAG +
Preference number: 5 (lower is better)
Translates to: AVSGRRKLHIHGNSH*CCDHHSGPNHITMQ
Trigger: CTGCATCGTAATGTGATTTGGGCCGGAATGATGATCACAACACCAATGAGAATTTCCATGTATATGCAATTTCCTTCTCCCAGATACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS TCA 90 bp TGGGAGAAGGAAATTGCATATACATGGAAATTCTCATTGGTGTTGTaGTCATCATTCCGGCCCAAATCACATTACGATGCAGAATCAATT +
Preference number: 5 (lower is better)
Translates to: WEKEIAYTWKFSLVL*SSFRPKSHYDAESI
Trigger: AATTGATTCTGCATCGTAATGTGATTTGGGCCGGAATGATGATCACAACACCAATGAGAATTTCCATGTATATGCAATTTCCTTCTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 90 bp TCGATAATGGTAAAACACCTAACGCAGTATCTGGGAGAAGGAAATTaGATATACATGGAAATTCTCATTGGTGTTGTGATCATCATTCCG +
Preference number: 5 (lower is better)
Translates to: SIMVKHLTQYLGEGN*IYMEILIGVVIIIP
Trigger: CGGAATGATGATCACAACACCAATGAGAATTTCCATGTATATGCAATTTCCTTCTCCCAGATACTGCGTTAGGTGTTTTACCATTATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS-3UTR CAA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCTAGAGAAACTGACCTaGAACATGAAGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: QIIKRCINLSGRLVNMSILEKLT*NMKSLD
Trigger: GTCAAGAGACTTCATGTTCAAGGTCAGTTTCTCTAG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS-3UTR CAA 90 bp CAGATCATAAAAAGATGCATCAATCTGTCAGGAAGGCTGGTTAATATGAGTATTCCGATGGACATTTTGTaGCAAGCAGAAAAGAGGAAA +
Preference number: 5 (lower is better)
Translates to: QIIKRCINLSGRLVNMSIPMDIL*QAEKRK
Trigger: TTTCCTCTTTTCTGCTTGCAACAAAATGTCCATCGG...AATACTCATATTAACCAGCCTTCCTGACAGATTGATGCATCTTTTTATGATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS GCA 72 bp CCCTTGGCCACCATGACGCTGGCGCCGAGGTCCCGGTaGGCGCTGGCCGCCAGCCCGAAGAGCAGCACGTGG +
Preference number: 6 (lower is better)
Translates to: PLATMTLAPRSR*ALAASPKSSTW
Trigger: CCACGTGCTGCTCTTCGGGCTGGCGGCCAGCGCGCACCGGGACCTCGGCGCCAGCGTCATGGTGGCCAAGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS TCA 72 bp GGAAGCGCTGCAGCTCGTCCCGGAGCTCCTCGAAGGTaGTGGCCCCGTTGCCGTCCGCGTCGGCCGATTCGA +
Preference number: 6 (lower is better)
Translates to: GSAAARPGAPRR*WPRCRPRRPIR
Trigger: TCGAATCGGCCGACGCGGACGGCAACGGGGCCATCACCTTCGAGGAGCTCCGGGACGAGCTGCAGCGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp GCACAGTGCGCAGCTCATCCGGGTCAATGGAGCCACTaGCTGTCCCGAGTGGGGATGAAGCCCAGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: AQCAAHPGQWSH*LSRVGMKPSAG
Trigger: GCCCGCACTGGGCTTCATCCCCACTCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS CCA 72 bp TCCGCGTCGGCCGATTCGAAGAGCGCCAGCGTCAGCTaGTCCAGCTTCTCGTCAGGCAGCGAGATGGCGCTC +
Preference number: 6 (lower is better)
Translates to: SASADSKSASVS*SSFSSGSEMAL
Trigger: GAGCGCCATCTCGCTGCCTGACGAGAAGCTGGACCAGCTGACGCTGGCGCTCTTCGAATCGGCCGACGCGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CCA 72 bp CCAGCCCGAAGAGCAGCACGTGGAGGCCTGCATAGGTaGCCAGGCAGAACAGCTGGCTGCGGTGGTTGTGCC +
Preference number: 6 (lower is better)
Translates to: PARRAARGGLHR*PGRTAGCGGCA
Trigger: GGCACAACCACCGCAGCCAGCTGTTCTGCCTGGCCACCTATGCAGGCCTCCACGTGCTGCTCTTCGGGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CCA 72 bp AGCACCGCGATGAAGCTGCAGTCGAAGTTGAGGCACTaGCCGCAGCCCTTGGCCACCATGACGCTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: STAMKLQSKLRH*PQPLATMTLAP
Trigger: CGGCGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTTCATCGCGGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CAA 90 bp AGGCAGCGTCTGAGCATCAGCACCGCGATGAAGCTGCAGTCGAAGTaGAGGCACTGGCCGCAGCCCTTGGCCACCATGACGCTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: RQRLSISTAMKLQSK*RHWPQPLATMTLAP
Trigger: CGGCGCCAGCGTCATGGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTTCATCGCGGTGCTGATGCTCAGACGCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS TCA 72 bp CCGAACCGTGTACCCAGCCAATGCCAGGCCTCGTGGTaGGCAGCAGCTCCCAGAACTGGAAAGGGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: PNRVPSQCQASW*AAAPRTGKGWP
Trigger: AGGCCAGCCCTTTCCAGTTCTGGGAGCTGCTGCTCACCACGAGGCCTGGCATTGGCTGGGTACACGGTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp AGATGGCGCTCTCGCGCAGACACGACTGCAGCACAGTaGGCAGCTCATCCGGGTCAATGGAGCCACTGCCTG +
Preference number: 6 (lower is better)
Translates to: RWRSRADTTAAQ*AAHPGQWSHCL
Trigger: CAGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS GCA 72 bp TCAGGCAGCGAGATGGCGCTCTCGCGCAGACACGACTaGAGCACAGTGCGCAGCTCATCCGGGTCAATGGAG +
Preference number: 6 (lower is better)
Translates to: SGSEMALSRRHD*STVRSSSGSME
Trigger: CTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCTCGCTGCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp CTGATGGTCAGGTTCTCCATGACTCCGGGGAAGCGCTaGAGCTCGTCCCGGAGCTCCTCGAAGGTGATGGCC +
Preference number: 6 (lower is better)
Translates to: LMVRFSMTPGKR*SSSRSSSKVMA
Trigger: GGCCATCACCTTCGAGGAGCTCCGGGACGAGCTGCAGCGCTTCCCCGGAGTCATGGAGAACCTGACCATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CCA 72 bp ACGACTGCAGCACAGTGCGCAGCTCATCCGGGTCAATaGAGCCACTGCCTGTCCCGAGTGGGGATGAAGCCC +
Preference number: 6 (lower is better)
Translates to: TTAAQCAAHPGQ*SHCLSRVGMKP
Trigger: GGGCTTCATCCCCACTCGGGACAGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000527315.5
CDS TCA 72 bp CAGGAGGCCGGGATGGCACCTCCAGGCCTGCCAAGGTaGAATGGCCAGTTCTCACTGAGGCCCACTGATCTC +
Preference number: 6 (lower is better)
Translates to: QEAGMAPPGLPR*NGQFSLRPTDL
Trigger: GAGATCAGTGGGCCTCAGTGAGAACTGGCCATTTCACCTTGGCAGGCCTGGAGGTGCCATCCCGGCCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp AGATGGCGCTCTCGCGCAGACACGACTGCAGCACAGTaGGCAGCTCATCCGGGTCAATGGAGCCACTGCCAT +
Preference number: 6 (lower is better)
Translates to: RWRSRADTTAAQ*AAHPGQWSHCH
Trigger: ATGGCAGTGGCTCCATTGACCCGGATGAGCTGCGCACTGTGCTGCAGTCGTGTCTGCGCGAGAGCGCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000448182.7
ENST00000455873.7
ENST00000530406.6
CDS CAA 72 bp CTGAGCATCAGCACCGCGATGAAGCTGCAGTCGAAGTaGAGGCACTGGCCGCAGCCCTTGGCCACCATGACG +
Preference number: 6 (lower is better)
Translates to: LSISTAMKLQSK*RHWPQPLATMT
Trigger: CGTCATGGTGGCCAAGGGCTGCGGCCAGTGCCTCAACTTCGACTGCAGCTTCATCGCGGTGCTGATGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp AGCACCCCACTCTGTACCTGCAGACGCCCCCTGCCGTaGACACACTGCAAGAAGTGGTGGGCCTCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: STPLCTCRRPLP*THCKKWWASSV
Trigger: AACAGAAGAGGCCCACCACTTCTTGCAGTGTGTGCACGGCAGGGGGCGTCTGCAGGTACAGAGTGGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp CTCTGTACCTGCAGACGCCCCCTGCCGTGCACACACTaGAAGAAGTGGTGGGCCTCTTCTGTTTACCCACCT +
Preference number: 6 (lower is better)
Translates to: LCTCRRPLPCTH*KKWWASSVYPP
Trigger: AGGTGGGTAAACAGAAGAGGCCCACCACTTCTTGCAGTGTGTGCACGGCAGGGGGCGTCTGCAGGTACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 90 bp CTCCTCGACAGCCTCTTAGAACCACGGCCCAGTGGGTCTGATGCCTaGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTTGGGACCGA +
Preference number: 6 (lower is better)
Translates to: LLDSLLEPRPSGSDA*KDSYSLFVHWPWDR
Trigger: TCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGTGGTTCTAAGAGGCTGTCGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp GGGCTGGAAGCCAGGTCTAAGTGGCTCCCACTCCAGTaGTCTTTCCACATCCTGTGCTCTCAGCACCAGTCT +
Preference number: 6 (lower is better)
Translates to: GLEARSKWLPLQ*SFHILCSQHQS
Trigger: AGACTGGTGCTGAGAGCACAGGATGTGGAAAGAGCACTGGAGTGGGAGCCACTTAGACCTGGCTTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529367.1
CDS TCA 72 bp ATCTCCCCATCTTCTCCTGCAATGGTCTTAAACTGCTaGGTCACCCACCGGAGCCACCTGGCATCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ISPSSPAMVLNC*VTHRSHLASSS
Trigger: CGAGGAGGATGCCAGGTGGCTCCGGTGGGTGACTCAGCAGTTTAAGACCATTGCAGGAGAAGATGGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS TCA 72 bp CCAGCAGCCACTTCCAGAAGTTGGGCCCATGAAAGATaGGCAGAAGCCACACGAGGAGGTAGGACAGGTGAG +
Preference number: 6 (lower is better)
Translates to: PAATSRSWAHER*AEATRGGRTGE
Trigger: CTCACCTGTCCTACCTCCTCGTGTGGCTTCTGCTCATCTTTCATGGGCCCAACTTCTGGAAGTGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CCA 72 bp CATGGTGCCTCTACAGCCTTCAGGGCCCGTCTGGGCTaGGTCTCCAGATGTGTTCATCTTCTCCTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: HGASTAFRARLG*VSRCVHLLLSS
Trigger: AGAAGACAGGAGAAGATGAACACATCTGGAGACCCAGCCCAGACGGGCCCTGAAGGCTGTAGAGGCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388866.8
ENST00000530406.6
CDS TCA 72 bp CCTCGACAGCCTCTTAGAACCACGGCCCAGTGGGTCTaGTGCCTTGAAGGACTCATACAGCCTGTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: PRQPLRTTAQWV*CLEGLIQPVCP
Trigger: TGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGTGGTTCTAAGAGGCTGTCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp GACTTCCATGATGCACACGGCTGCCATGCGGGACACTaGCAGTCCGATGGCCTTCTCCAGGAAAAACAAGAT +
Preference number: 6 (lower is better)
Translates to: DFHDAHGCHAGH*QSDGLLQEKQD
Trigger: ATCTTGTTTTTCCTGGAGAAGGCCATCGGACTGGCAGTGTCCCGCATGGCAGCCGTGTGCATCATGGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp GCTTTTCAGAATGCAGGTCCATCCCTGCGAATCCCTTaGTCAACACACTTTGATGGCTCCCCGTCGCGCGTA +
Preference number: 6 (lower is better)
Translates to: AFQNAGPSLRIP*STHFDGSPSRV
Trigger: TACGCGCGACGGGGAGCCATCAAAGTGTGTTGAGCAAGGGATTCGCAGGGATGGACCTGCATTCTGAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 72 bp CTCATCCAGAGGACCAGTCTCCCCCTGGCCCCTTCATaGCCTCTTCTATCTGCTTTAATCTCTCTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LIQRTSLPLAPS*PLLSALISLLA
Trigger: GGCCAACAGAGAGATTAAAGCAGATAGAAGAGGCCATGAAGGGGCCAGGGGGAGACTGGTCCTCTGGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 72 bp TGCCTAGCTCAACAGCAATGGACACCTCCCCACGGGTaGAGAATCTTTGGCTTCAGTGGTTGCCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: CLAQQQWTPPHG*RIFGFSGCLSP
Trigger: TGGAGACAGGCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGCTGTTGAGCTAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 72 bp ACCTTCCATGTTCCCGACTGCCTAGCTCAACAGCAATaGACACCTCCCCACGGGTGGAGAATCTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: TFHVPDCLAQQQ*TPPHGWRIFGF
Trigger: GAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGCTGTTGAGCTAGGCAGTCGGGAACATGGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 72 bp TACAACATGACTGCATACCAGCCTGGGCGCAATGGATaGAGACCTCGGATAAGCCGGCACAGACGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: YNMTAYQPGRNG*RPRISRHRRRP
Trigger: TGGCCTTCGTCTGTGCCGGCTTATCCGAGGTCTCAATCCATTGCGCCCAGGCTGGTATGCAGTCATGTTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CAA 72 bp AGCCTCTTAGAACCACGGCCCAGTGGGTCTGATGCCTaGAAGGACTCATACAGCCTGTTTGTCCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: SLLEPRPSGSDA*KDSYSLFVHWP
Trigger: AGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATCAGACCCACTGGGCCGTGGTTCTAAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp TACAGCCTGTTTGTCCACTGGCCTTGGGACCGAATGTaGAGCCAGATAGTGTCTTTCTGCTCAGGAGCACTG +
Preference number: 6 (lower is better)
Translates to: YSLFVHWPWDRM*SQIVSFCSGAL
Trigger: CAGTGCTCCTGAGCAGAAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CCA 72 bp CAGATACAACATGACTGCATACCAGCCTGGGCGCAATaGATTGAGACCTCGGATAAGCCGGCACAGACGAAG +
Preference number: 6 (lower is better)
Translates to: QIQHDCIPAWAQ*IETSDKPAQTK
Trigger: CTTCGTCTGTGCCGGCTTATCCGAGGTCTCAATCCATTGCGCCCAGGCTGGTATGCAGTCATGTTGTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CCA 72 bp GACACCTCCCCACGGGTGGAGAATCTTTGGCTTCAGTaGTTGCCTGTCTCCAGAATCGGTAACTCCCTAAGT +
Preference number: 6 (lower is better)
Translates to: DTSPRVENLWLQ*LPVSRIGNSLS
Trigger: ACTTAGGGAGTTACCGATTCTGGAGACAGGCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 72 bp ACAGCAATGGACACCTCCCCACGGGTGGAGAATCTTTaGCTTCAGTGGTTGCCTGTCTCCAGAATCGGTAAC +
Preference number: 6 (lower is better)
Translates to: TAMDTSPRVENL*LQWLPVSRIGN
Trigger: GTTACCGATTCTGGAGACAGGCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 72 bp GATGCCTTGAAGGACTCATACAGCCTGTTTGTCCACTaGCCTTGGGACCGAATGTGCAGCCAGATAGTGTCT +
Preference number: 6 (lower is better)
Translates to: DALKDSYSLFVH*PWDRMCSQIVS
Trigger: AGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000525143.5
ENST00000527315.5
ENST00000530406.6
CDS CCA 72 bp GCCCACAGCCTCAGTTATCCAAAGGCACACTGTATGTaGGTTAGCGCTGAGGGAGTGTGCCTTGTTGTTCAA +
Preference number: 6 (lower is better)
Translates to: AHSLSYPKAHCM*VSAEGVCLVVQ
Trigger: TTGAACAACAAGGCACACTCCCTCAGCGCTAACCCACATACAGTGTGCCTTTGGATAACTGAGGCTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CCA 72 bp TTGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTTaGGACCGAATGTGCAGCCAGATAGTGTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: LKDSYSLFVHWP*DRMCSQIVSWR
Trigger: CCTCCAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS CAA 72 bp CCACTGCCATCGATGTCATACACCTGGAAGAGGAATTaGAGTTTGTCCATGGGGCTGCCATGGATGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PLPSMSYTWKRN*SLSMGLPWMSR
Trigger: CCTGCTCATCCATGGCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000448182.7
ENST00000455873.7
ENST00000530406.6
CDS CAA 72 bp CTTGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTaGGGACCGAATGTGCAGCCAGATAGTGTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: LEGLIQPVCPLA*GPNVQPDSVLE
Trigger: CTCCAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525143.5
CDS CAA 90 bp ATCCTCCTCGGCACTCATGGTGCACGAGGGTCTGCGGCTTCATTCTaGAAGTCAGTGAGACCAAGAACCCACCAATTCCAGATACAACAT +
Preference number: 6 (lower is better)
Translates to: ILLGTHGARGSAASF*KSVRPRTHQFQIQH
Trigger: ATGTTGTATCTGGAATTGGTGGGTTCTTGGTCTCACTGACTTCAAGAATGAAGCCGCAGACCCTCGTGCACCATGAGTGCCGAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CAA 90 bp GCAATGGACACCTCCCCACGGGTGGAGAATCTTTGGCTTCAGTGGTaGCCTGTCTCCAGAATCGGTAACTCCCTAAGTACTACTCAACTT +
Preference number: 6 (lower is better)
Translates to: AMDTSPRVENLWLQW*PVSRIGNSLSTTQL
Trigger: AAGTTGAGTAGTACTTAGGGAGTTACCGATTCTGGAGACAGGCAACCACTGAAGCCAAAGATTCTCCACCCGTGGGGAGGTGTCCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp AGACCAAGAACCCACCAATTCCAGATACAACATGACTaGATACCAGCCTGGGCGCAATGGATTGAGACCTCG +
Preference number: 6 (lower is better)
Translates to: RPRTHQFQIQHD*IPAWAQWIETS
Trigger: CGAGGTCTCAATCCATTGCGCCCAGGCTGGTATGCAGTCATGTTGTATCTGGAATTGGTGGGTTCTTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000448182.7
CDS CCA 72 bp TTGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTTaGGACCGAATGTGCAGCCAGATAGTGTCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: LKDSYSLFVHWP*DRMCSQIVSFC
Trigger: GCAGAAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CAA 72 bp GCACACACATCGATGTCATACACCTGGAAGAGGAATTaGAGTTTGTCCATGGGGCTGCCATGGATGAGCAGG +
Preference number: 6 (lower is better)
Translates to: AHTSMSYTWKRN*SLSMGLPWMSR
Trigger: CCTGCTCATCCATGGCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGTGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS CAA 72 bp CTTGAAGGACTCATACAGCCTGTTTGTCCACTGGCCTaGGGACCGAATGTGCAGCCAGATAGTGTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: LEGLIQPVCPLA*GPNVQPDSVFL
Trigger: CAGAAAGACACTATCTGGCTGCACATTCGGTCCCAAGGCCAGTGGACAAACAGGCTGTATGAGTCCTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CAA 72 bp CCATCGATGTCATACACCTGGAAGAGGAATTTGAGTTaGTCCATGGGGCTGCCATGGATGAGCAGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: PSMSYTWKRNLS*SMGLPWMSRVS
Trigger: ACTGACCCTGCTCATCCATGGCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CAA 72 bp CCCTTACCATCGATGTCATACACCTGGAAGAGGAATTaGAGTTTGTCCATGGGGCTGCCATGGATGAGCAGG +
Preference number: 6 (lower is better)
Translates to: PLPSMSYTWKRN*SLSMGLPWMSR
Trigger: CCTGCTCATCCATGGCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGGTAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS TCA 72 bp CCAGTCAGCTTTCCTTGGGGGTATAGACCATGCAACTaGAGGACCAAATGTCACCCTCAGCTCAGAAACCTT +
Preference number: 6 (lower is better)
Translates to: PVSFPWGYRPCN*RTKCHPQLRNL
Trigger: AAGGTTTCTGAGCTGAGGGTGACATTTGGTCCTTCAGTTGCATGGTCTATACCCCCAAGGAAAGCTGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp TTTGAATTCTTGCAGGCTGATCTCCCCATCTTCTCCTaGAATGGTCTTAAACTGCTGAGTCACCCACCGGAG +
Preference number: 6 (lower is better)
Translates to: FEFLQADLPIFS*NGLKLLSHPPE
Trigger: CTCCGGTGGGTGACTCAGCAGTTTAAGACCATTGCAGGAGAAGATGGGGAGATCAGCCTGCAAGAATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS GCA 72 bp GCTGAAGAAAAGCTTTTCAGAATGCAGGTCCATCCCTaGGAATCCCTTGCTCAACACACTTTGATGGCTCCC +
Preference number: 6 (lower is better)
Translates to: AEEKLFRMQVHP*ESLAQHTLMAP
Trigger: GGGAGCCATCAAAGTGTGTTGAGCAAGGGATTCGCAGGGATGGACCTGCATTCTGAAAAGCTTTTCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp CAGTCTCCCCCTGGCCCCTTCATGGCCTCTTCTATCTaGTTTAATCTCTCTGTTGGCCAATTTCAAATCCAG +
Preference number: 6 (lower is better)
Translates to: QSPPGPFMASSI*FNLSVGQFQIQ
Trigger: CTGGATTTGAAATTGGCCAACAGAGAGATTAAAGCAGATAGAAGAGGCCATGAAGGGGCCAGGGGGAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 72 bp ACATCGATGTCATACACCTGGAAGAGGAATTTGAGTTaGTCCATGGGGCTGCCATGGATGAGCAGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: TSMSYTWKRNLS*SMGLPWMSRVS
Trigger: ACTGACCCTGCTCATCCATGGCAGCCCCATGGACAAACTCAAATTCCTCTTCCAGGTGTATGACATCGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260364.9
ENST00000388866.8
CDS CAA 72 bp AAGGTTCTGGCCTCTGGTAAGTTGAATAGAAGGCATTaGTCTCCTGTGCCAGAGTCCCTCCTTTTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: KVLASGKLNRRH*SPVPESLLFSL
Trigger: CAGGGAGAAAAGGAGGGACTCTGGCACAGGAGACAAATGCCTTCTATTCAACTTACCAGAGGCCAGAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp AAGGCACACTGTATGTGGGTTAGCGCTGAGGGAGTGTaGCTTGTTGTTCAACTTGGAGCAAATGCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: KAHCMWVSAEGV*LVVQLGANALF
Trigger: AAACAGAGCATTTGCTCCAAGTTGAACAACAAGGCACACTCCCTCAGCGCTAACCCACATACAGTGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 90 bp CTCTGCAAAGAAGGACTCTTTCACATGCAGAGCTGCTTTGAATTCTaGCAGGCTGATCTCCCCATCTTCTCCTGCAATGGTCTTAAACTG +
Preference number: 6 (lower is better)
Translates to: LCKEGLFHMQSCFEF*QADLPIFSCNGLKL
Trigger: CAGTTTAAGACCATTGCAGGAGAAGATGGGGAGATCAGCCTGCAAGAATTCAAAGCAGCTCTGCATGTGAAAGAGTCCTTCTTTGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260364.9
ENST00000388866.8
ENST00000448182.7
ENST00000455873.7
ENST00000527315.5
ENST00000530406.6
CDS CAA 72 bp GTGGGCTCTAAGTCCTCTGGGGTAGTGGACCTCACTTaGCTCATCTCTAAAATGAGAGTAATCATTTCTCCC +
Preference number: 6 (lower is better)
Translates to: VGSKSSGVVDLT*LISKMRVIISP
Trigger: GGGAGAAATGATTACTCTCATTTTAGAGATGAGCAAAGTGAGGTCCACTACCCCAGAGGACTTAGAGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 90 bp TGTGCAATAGTGGGCTCTAAGTCCTCTGGGGTAGTGGACCTCACTTaGCTCATCTCTAAAATGAGAGTAATCATTTCTCCCTCTCAGAAC +
Preference number: 6 (lower is better)
Translates to: CAIVGSKSSGVVDLT*LISKMRVIISPSQN
Trigger: GTTCTGAGAGGGAGAAATGATTACTCTCATTTTAGAGATGAGCAAAGTGAGGTCCACTACCCCAGAGGACTTAGAGCCCACTATTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 72 bp CCTTCATGGCCTCTTCTATCTGCTTTAATCTCTCTGTaGGCCAATTTCAAATCCAGGGTCCTCCCTCACAAT +
Preference number: 6 (lower is better)
Translates to: PSWPLLSALISL*ANFKSRVLPHN
Trigger: ATTGTGAGGGAGGACCCTGGATTTGAAATTGGCCAACAGAGAGATTAAAGCAGATAGAAGAGGCCATGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 72 bp AGAAAAGATCAGAAAAAGGTTCTGGCCTCTGGTAAGTaGAATAGAAGGCATTTGTCTCCTGTGCCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: RKDQKKVLASGK*NRRHLSPVPES
Trigger: GGACTCTGGCACAGGAGACAAATGCCTTCTATTCAACTTACCAGAGGCCAGAACCTTTTTCTGATCTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 72 bp CCAGCAATTCCCCTTCTGGATATATACCCGGAAGAATaGAAAGCAGGAACTCAAACAGATATCTGTGCACCA +
Preference number: 6 (lower is better)
Translates to: PAIPLLDIYPEE*KAGTQTDICAP
Trigger: TGGTGCACAGATATCTGTTTGAGTTCCTGCTTTCAATTCTTCCGGGTATATATCCAGAAGGGGAATTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 90 bp CCATGTCATCCAGCAATTCCCCTTCTGGATATATACCCGGAAGAATaGAAAGCAGGAACTCAAACAGATATCTGTGCACCAATGTTCATA +
Preference number: 6 (lower is better)
Translates to: PCHPAIPLLDIYPEE*KAGTQTDICAPMFI
Trigger: TATGAACATTGGTGCACAGATATCTGTTTGAGTTCCTGCTTTCAATTCTTCCGGGTATATATCCAGAAGGGGAATTGCTGGATGACATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS TCA 72 bp TTTCTGTATTTTATTCTTCCTGAGCAGCAGAGCCCGTaGTTAATGATTTCTTGGCCTGCTTTGGATATGGAC +
Preference number: 6 (lower is better)
Translates to: FLYFILPEQQSP*LMISWPALDMD
Trigger: GTCCATATCCAAAGCAGGCCAAGAAATCATTAATCACGGGCTCTGCTGCTCAGGAAGAATAAAATACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS CAA 90 bp CTCGATAATGGTAAAACACCTAACGCAGTATCTGGGAGAAGGAAATaGCATATACATGGAAATTCTCATTGGTGTTGTGATCATCATTCC +
Preference number: 6 (lower is better)
Translates to: LDNGKTPNAVSGRRK*HIHGNSHWCCDHHS
Trigger: GGAATGATGATCACAACACCAATGAGAATTTCCATGTATATGCAATTTCCTTCTCCCAGATACTGCGTTAGGTGTTTTACCATTATCGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS TCA 72 bp GAAATTGCATATACATGGAAATTCTCATTGGTGTTGTaGTCATCATTCCGGCCCAAATCACATTACGATGCA +
Preference number: 6 (lower is better)
Translates to: EIAYTWKFSLVL*SSFRPKSHYDA
Trigger: TGCATCGTAATGTGATTTGGGCCGGAATGATGATCACAACACCAATGAGAATTTCCATGTATATGCAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527315.5
CDS GCA 72 bp GTAAAACACCTAACGCAGTATCTGGGAGAAGGAAATTaGATATACATGGAAATTCTCATTGGTGTTGTGATC +
Preference number: 6 (lower is better)
Translates to: VKHLTQYLGEGN*IYMEILIGVVI
Trigger: GATCACAACACCAATGAGAATTTCCATGTATATGCAATTTCCTTCTCCCAGATACTGCGTTAGGTGTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527315.5