RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOVA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139910

Ensembl transcript IDs: ENST00000344429.9, ENST00000347476.10, ENST00000465357.6, ENST00000483536.6, ENST00000539517.7, ENST00000546546.1, ENST00000547415.1, ENST00000547619.5, ENST00000549571.5, ENST00000574031.1

Found 688 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCCGCCGTACCACCAGCTGTGCTGCCACTGGCTGAGGCTTCACTaGCATAGGTGGCCAATAAATTGGCTGCTGCTGCTGCTGGGTTGG +
Preference number: 1 (lower is better)
Translates to: SPPYHQLCCHWLRLH*HRWPINWLLLLLGW
Trigger: CCAACCCAGCAGCAGCAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGGCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp TGCTGCCACTGGCTGAGGCTTCACTGGCATAGGTGGCCAATAAATTaGCTGCTGCTGCTGCTGGGTTGGCACTGGCAGCTGCTGCAGCCA +
Preference number: 1 (lower is better)
Translates to: CCHWLRLHWHRWPIN*LLLLLGWHWQLLQP
Trigger: TGGCTGCAGCAGCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp CACTGGCATAGGTGGCCAATAAATTGGCTGCTGCTGCTGCTGGGTTaGCACTGGCAGCTGCTGCAGCCAAAGCCCCTGTTGCTGCTGCTT +
Preference number: 1 (lower is better)
Translates to: HWHRWPINWLLLLLG*HWQLLQPKPLLLLL
Trigger: AAGCAGCAGCAACAGGGGCTTTGGCTGCAGCAGCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCCAATTTATTGGCCACCTATGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR GCA 90 bp CCAGGCTACCTAATGCAAATGTCCCCGCCGTACCACCAGCTGTGCTaGCACTGGCTGAGGCTTCACTGGCATAGGTGGCCAATAAATTGG +
Preference number: 1 (lower is better)
Translates to: PGYLMQMSPPYHQLC*HWLRLHWHRWPINW
Trigger: CCAATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGGCGGGGACATTTGCATTAGGTAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp TACCTAATGCAAATGTCCCCGCCGTACCACCAGCTGTGCTGCCACTaGCTGAGGCTTCACTGGCATAGGTGGCCAATAAATTGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: YLMQMSPPYHQLCCH*LRLHWHRWPINWLL
Trigger: CAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGGCGGGGACATTTGCATTAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp GGCCTTGAGTGGGCAAACTCAGAGGTTAACAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTCAGGAGAGGTACAGAAGAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: GLEWANSEVNRWCVK*PGQLALRRGTEEGD
Trigger: GTCACCCTCTTCTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATTTGACACACCATCTGTTAACCTCTGAGTTTGCCCACTCAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CCA 90 bp GCCCCTATGAGTGGCCTTGAGTGGGCAAACTCAGAGGTTAACAGATaGTGTGTCAAATGGCCTGGACAGTTGGCACTCAGGAGAGGTACA +
Preference number: 1 (lower is better)
Translates to: APMSGLEWANSEVNR*CVKWPGQLALRRGT
Trigger: TGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATTTGACACACCATCTGTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CCA 90 bp ATGAGGAGGTGCTTGGGGATGGATGCCCCTATGAGTGGCCTTGAGTaGGCAAACTCAGAGGTTAACAGATGGTGTGTCAAATGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: MRRCLGMDAPMSGLE*ANSEVNRWCVKWPG
Trigger: TCCAGGCCATTTGACACACCATCTGTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGGGCATCCATCCCCAAGCACCTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR GCA 90 bp ACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTaGACCCAAGCCCCTGACTGCTCCATTACAGCCTTCACAGTAGCA +
Preference number: 1 (lower is better)
Translates to: TTLSCKLIPSGFWES*TQAPDCSITAFTVA
Trigger: TGCTACTGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR CCA 90 bp CAAACTCAGAGGTTAACAGATGGTGTGTCAAATGGCCTGGACAGTTaGCACTCAGGAGAGGTACAGAAGAGGGTGACAGTTGTTGGGTCT +
Preference number: 1 (lower is better)
Translates to: QTQRLTDGVSNGLDS*HSGEVQKRVTVVGS
Trigger: AGACCCAACAACTGTCACCCTCTTCTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATTTGACACACCATCTGTTAACCTCTGAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CCA 90 bp GAAGATGGCAATGTTTGTTTGATGCGATCTGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACTGGTTCTGTCTTGGCCACATTTTGG +
Preference number: 1 (lower is better)
Translates to: EDGNVCLMRSGLTVV*GCRMLTGSVLATFW
Trigger: CCAAAATGTGGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAACATTGCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR TCA 90 bp GCCCGAACTCCTTGCTCATATGTGATCCTTTGTGTAATTAAATATTaGGCAGCCTGTGTTGCAGCTGGTGTTCCAGTAATGGTTACCTTC +
Preference number: 1 (lower is better)
Translates to: ARTPCSYVILCVIKY*AACVAAGVPVMVTF
Trigger: GAAGGTAACCATTACTGGAACACCAGCTGCAACACAGGCTGCTCAATATTTAATTACACAAAGGATCACATATGAGCAAGGAGTTCGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp TATAATCTTTACCTGATTAGCTCTGGAGGTGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTT +
Preference number: 1 (lower is better)
Translates to: YNLYLISSGGGHGIR*RGLGGSWGRWQCLF
Trigger: AAACAAACATTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCCAGAGCTAATCAGGTAAAGATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR GCA 90 bp CAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTaGAAAGAGGAAGGCAGCCGTTTAAAAAGTCTAGGTGCAATGTTG +
Preference number: 1 (lower is better)
Translates to: QVIAITGSADEIGLQ*KEEGSRLKSLGAML
Trigger: CAACATTGCACCTAGACTTTTTAAACGGCTGCCTTCCTCTTTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR CCA 90 bp GAAAGTCCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTaGTCTTCAGTGCAAAGAGGAAGGCAGCCGTTTAAAAAGTCTAGG +
Preference number: 1 (lower is better)
Translates to: ESPTGNSNNWKCRRN*SSVQRGRQPFKKSR
Trigger: CCTAGACTTTTTAAACGGCTGCCTTCCTCTTTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGGACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR CCA 90 bp ACTATAATCTTTACTTGTTTGATGCGATCTGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACTGGTTCTGTCTTGGCCACATTTTGG +
Preference number: 1 (lower is better)
Translates to: TIIFTCLMRSGLTVV*GCRMLTGSVLATFW
Trigger: CCAAAATGTGGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAGTAAAGATTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546546.1
3UTR GCA 90 bp TTGCACCAGTCAACTCCTGGTATTCCACTAATGTTTTCCCTCCTTTaGCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAA +
Preference number: 1 (lower is better)
Translates to: LHQSTPGIPLMFSLL*QVLHQLSFLALLFQ
Trigger: TTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAGGGAAAACATTAGTGGAATACCAGGAGTTGACTGGTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp CTGATATTGAGACAGCTGCCACTTTGTGGATCCTCTTGTATCTTCTaGATGATAAGTTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCA +
Preference number: 1 (lower is better)
Translates to: LILRQLPLCGSSCIF*MISSTAFRFCSGSP
Trigger: TGGAGAACCTGAACAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 90 bp ACCTGTCACATTGGCATAACTGATATTGAGACAGCTGCCACTTTGTaGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCG +
Preference number: 1 (lower is better)
Translates to: TCHIGITDIETAATL*ILLYLLDDKFNSFS
Trigger: CGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAATGTGACAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAATTGGCTGCTGCTGCTaGTGGGTTGGCACTGGCAGC +
Preference number: 2 (lower is better)
Translates to: ETALAASAMLQRLHHGSKIGCCC*WVGTGS
Trigger: GCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCCAAT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACCGTACCACCAGCTGTaGTGCCACTGGCTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: ETALAASAMLQRLHHGSKPYHQL*CHWLRL
Trigger: AAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGG...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATGGCACTGGCAGCTGCTaGAGCCAAAGCCCCTGTTGC +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHGTGSC*SQSPCC
Trigger: GCAACAGGGGCTTTGGCTGCAGCAGCTGCCAGTGCC...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCACAGTACATCCTTCTTaGAAATGGGGTAAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSTVHPS*KWGKGG
Trigger: CCCTCCTTTACCCCATTTTCAAGAAGGATGTACTGT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGGGCCATGGCCAGCATaGAGCATTATTTCCATTGTC +
Preference number: 2 (lower is better)
Translates to: ETALAASAMLQRLHHGSKGPWPA*SIISIV
Trigger: GACAATGGAAATAATGCTGCATGCTGGCCATGGCCC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCAGCTGTGCTGCCACTaGCTGAGGCTTCACTGGCAT +
Preference number: 2 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCQLCCH*LRLHWH
Trigger: ATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGGATGCCCCTATaGGTGGCCTTGAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLGWMPL*VALSGQ
Trigger: TTGCCCACTCAAGGCCACTCATAGGGGCATCCATCC...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGCTGCTGCTGCTGGGTTaGCACTGGCAGCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLLLLLG*HWQLLQ
Trigger: CTGCAGCAGCTGCCAGTGCCAACCCAGCAGCAGCAG...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGCCCTATGAGTGGCCTTaGGTGGGCAAACTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLPYEWP*VGKLRG
Trigger: ACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGG...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAACTGCATGCACAGCATaGGGAGGTGCTTGGGGATGG +
Preference number: 2 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQTACTA*GGAWGW
Trigger: CCATCCCCAAGCACCTCCTCATGCTGTGCATGCAGT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp ATTTGCCACTGGACCTGTCACATTGGCATAACTGATATTGAGACAGCTGCCACTACCCAAGCCCCTGACTaGTCCATTACAGCCTTCACA +
Preference number: 2 (lower is better)
Translates to: ICHWTCHIGITDIETAATTQAPD*SITAFT
Trigger: TGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGT...AGTGGCAGCTGTCTCAATATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAATGGCCTGGACAGTTaGCACTCAGGAGAGGTACAG +
Preference number: 2 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCNGLDS*HSGEVQ
Trigger: CTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCGCTTCAACCGTTCCCTaGATCAAGCACACTCGCTCA +
Preference number: 2 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLASTVP*IKHTRS
Trigger: TGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGC...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR CCA 90 bp GGAGGTGGTCATGGGATCAGATGGAGAGGACTTGGTGGTAGTTGGGGAAGATGGGTCTTGGCCACATTTTaGGGCATTTCTCGAATTTTT +
Preference number: 2 (lower is better)
Translates to: GGGHGIRWRGLGGSWGRWVLATF*GISRIF
Trigger: AAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGAC...CCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACT +
Preference number: 2 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLGLTVV*GCRMLT
Trigger: AGTCAGCATTCTACAACCCCAGACCACCGTTAATCC...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR TCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTACAGTACATCCTTCTTaGAAATGGGGTAAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGTVHPS*KWGKGG
Trigger: CCCTCCTTTACCCCATTTTCAAGAAGGATGTACTGT...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAGGTACAGAAGAGGGTaGCAGTTGTTGGGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHRYRRG*QLLGLG
Trigger: CCCAAGACCCAACAACTGTCACCCTCTTCTGTACCT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGAGTTGCTCAGCCAGATaGTCCAGAGGTAGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLSCSAR*SRGSQH
Trigger: ATGCTGGCTACCTCTGGATCATCTGGCTGAGCAACT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCACTGCACCCAAGCCCCTaGCTGCTCCATTACAGCCTT +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPLHPSP*LLHYSL
Trigger: AAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAG...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATTGGCTGCTAGCGCCATaGTGCAAAGACTCCATCATG +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHWLLAP*CKDSIM
Trigger: CATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCA...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTATGAACTGCATTCAGTaGTTCAACCGTTCCCTGGAT +
Preference number: 2 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGMNCIQ*FNRSLD
Trigger: ATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR CCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGACAAATGATGAAGAATaGGCCATGGCCAGCATGCAG +
Preference number: 2 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQTNDEE*AMASMQ
Trigger: CTGCATGCTGGCCATGGCCCATTCTTCATCATTTGT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGTGTGTCAAATGGCCTaGACAGTTGGCACTCAGGAG +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLVCQMA*TVGTQE
Trigger: CTCCTGAGTGCCAACTGTCCAGGCCATTTGACACAC...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTC +
Preference number: 2 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFRWCVK*PGQLAL
Trigger: GAGTGCCAACTGTCCAGGCCATTTGACACACCATCT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp AGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCACGGTAGTTGGGGAAGATaGCAATGTTTGTTTGATGCG +
Preference number: 2 (lower is better)
Translates to: SDNPLLQVDPIRFLGKLHGSWGR*QCLFDA
Trigger: CGCATCAAACAAACATTGCCATCTTCCCCAACTACC...GTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCACTTCACTGGCATAGGTaGCCAATAAATTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPLHWHR*PINWLL
Trigger: CAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAG...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 90 bp TCAGAGAGAGGCTGGACGAAATTCAGACATGGAGCATCACACTCATaGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCAT +
Preference number: 2 (lower is better)
Translates to: SERGWTKFRHGASHS*FFNWLHRKEQLGCH
Trigger: ATGGCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATGTCTGAATTTCGTCCAGCCTCTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGAAATGTACAAACCTCTaGAGAGGTGGGACTCCATGT +
Preference number: 2 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQKCTNL*RGGTPC
Trigger: ACATGGAGTCCCACCTCTTCAGAGGTTTGTACATTT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAAGACTTACAGGACAGTaGTTTGGCCTCACTCCATTT +
Preference number: 2 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPRLTGQ*FGLTPF
Trigger: AAATGGAGTGAGGCCAAAGCACTGTCCTGTAAGTCT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGTACAGGACAGTGCTTTaGCCTCACTCCATTTTAGGT +
Preference number: 2 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQYRTVL*PHSILG
Trigger: ACCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTA...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCACAAATGATGAAGAATaGGCCATGGCCAGCATGCAG +
Preference number: 2 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFTNDEE*AMASMQ
Trigger: CTGCATGCTGGCCATGGCCCATTCTTCATCATTTGT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCATCAGAGGTTAACAGATaGTGTGTCAAATGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPSEVNR*CVKWPG
Trigger: TCCAGGCCATTTGACACACCATCTGTTAACCTCTGA...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCATGAGTGGCCTTGAGTaGGCAAACTCAGAGGTTAAC +
Preference number: 2 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFMSGLE*ANSEVN
Trigger: GTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCAT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAAGTTCAGAGAGAGGCTaGACGAAATTCAGACATGGA +
Preference number: 2 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPSSERG*TKFRHG
Trigger: TCCATGTCTGAATTTCGTCCAGCCTCTCTCTGAACT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GTTTTCTGGCACTGCTATTTCAACTACATCCTTGGATCCATCTGTGGACTTTTCGCTTCAACCGTTCCCTaGATCAAGCACACTCGCTCA +
Preference number: 2 (lower is better)
Translates to: VFWHCYFNYILGSICGLFASTVP*IKHTRS
Trigger: TGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGC...GAAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAATAGCAGTGCCAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGT +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLGHGIR*RGLGGS
Trigger: ACTACCACCAAGTCCTCTCCATCTGATCCCATGACC...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTGGCTGAGGCTTCACTaGCATAGGTGGCCAATAAAT +
Preference number: 2 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCWLRLH*HRWPIN
Trigger: ATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 90 bp ATGGTTACCTTCCGATTCCTTGTGCCAGGTACGAATTCTCCTTTTTaGGAGATCTGTATCCTTGCACCAGTCAACTCCTGGTATTCCACT +
Preference number: 2 (lower is better)
Translates to: MVTFRFLVPGTNSPF*EICILAPVNSWYST
Trigger: AGTGGAATACCAGGAGTTGACTGGTGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGTACCTGGCACAAGGAATCGGAAGGTAACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGAGGTGGGACTCCATGTaGGAACTTTTGTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQRWDSM*ELLLNL
Trigger: TAAGTTCAACAAAAGTTCTCACATGGAGTCCCACCT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATCCCTATGAGTGGCCTTaGGTGGGCAAACTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNPYEWP*VGKLRG
Trigger: ACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGG...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGACTATAATCTTTACCTaGTTAGCTCTGGAGGTGGTC +
Preference number: 2 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQTIIFT*LALEVV
Trigger: GACCACCTCCAGAGCTAATCAGGTAAAGATTATAGT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGCCCTCTCTTGCAAGTTaGTCCCATCAGGTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLPSLAS*SHQVSG
Trigger: CCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGG...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGACTTACAGGACAGTaGTTTGGCCTCACTCCATTT +
Preference number: 2 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCRLTGQ*FGLTPF
Trigger: AAATGGAGTGAGGCCAAAGCACTGTCCTGTAAGTCT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCCCCTATTATCAGACCTaGTGTGCTGTTGGGAACTAT +
Preference number: 2 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLPYYQT*CAVGNY
Trigger: ATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR GCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTTGAGCAGCCTGTGTTaGAGCTGGTGTTCCAGTAAT +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLLSSLC*SWCSSN
Trigger: ATTACTGGAACACCAGCTGCAACACAGGCTGCTCAA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCATGAAGAATGGGCCATaGCCAGCATGCAGCATTATT +
Preference number: 2 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCMKNGP*PACSII
Trigger: AATAATGCTGCATGCTGGCCATGGCCCATTCTTCAT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCACAGTTGTTGGGTCTTaGGAACAAAGGCTTACTCTG +
Preference number: 2 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCTVVGS*EQRLTL
Trigger: CAGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATATGAGTGGCCTTGAGTaGGCAAACTCAGAGGTTAAC +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHMSGLE*ANSEVN
Trigger: GTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCAT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTTTGTTTGATGCGATCTaGATTAACGGTGGTCTGGGG +
Preference number: 2 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVLFDAI*INGGLG
Trigger: CCCCAGACCACCGTTAATCCAGATCGCATCAAACAA...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAGCACCAGTCAACTCCTaGTATTCCACTAATGTTTTC +
Preference number: 2 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPAPVNS*YSTNVF
Trigger: GAAAACATTAGTGGAATACCAGGAGTTGACTGGTGC...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 90 bp AAATGCTCCACAAAACATGCAAATTACCGAGTATTAGAAACTGCATaGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: KCSTKHANYRVLETA*AASAMLQRLHHGSK
Trigger: TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGCATGTTTTGTGGAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATCCATTTTAGGTCACTaGCCCCACCATACTCAACCT +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKSILGH*PHHTQP
Trigger: AGGTTGAGTATGGTGGGGTCAGTGACCTAAAATGGA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAAATGTACAAACCTCTaGAGAGGTGGGACTCCATGT +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHKCTNL*RGGTPC
Trigger: ACATGGAGTCCCACCTCTTCAGAGGTTTGTACATTT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAGGCTTACTCTGAAATaGCCTGTCAAAAAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHRLTLK*PVKKPD
Trigger: GTCAGGCTTTTTGACAGGTCATTTCAGAGTAAGCCT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGGGTTGTAGAATGCTaGCTGGTTCTGTCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGVVEC*LVLSWP
Trigger: TGGCCAAGACAGAACCAGTCAGCATTCTACAACCCC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCACCAGGTCATTGCCTGTaGAGCCAGATAAAACTGCTG +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPPGHCL*SQIKLL
Trigger: CAGCAGTTTTATCTGGCTTCACAGGCAATGACCTGG...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATACTCAACCCACTTTCTaGGGATTGGCAGCCCGAACT +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNTQPTF*GLAART
Trigger: AGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGAGT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGAAAAACTTCACTTCTaGAAAGTACAGTACATCCTT +
Preference number: 2 (lower is better)
Translates to: ETALAASAMLQRLHHGSKEKLHF*KVQYIL
Trigger: AAGGATGTACTGTACTTTGCAGAAGTGAAGTTTTTC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATCTGCTAGCGCCATGCTaGAAAGACTCCATCATGGGA +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNLLAPC*KDSIMG
Trigger: TCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAG...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGCACAGCATGAGGAGGTaGTTGGGGATGGATGCCCCT +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLHSMRR*LGMDAP
Trigger: AGGGGCATCCATCCCCAAGCACCTCCTCATGCTGTG...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGAATGAATCCATGAACTaGATTCAGTGCTTCAACCGT +
Preference number: 2 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKNESMN*IQCFNR
Trigger: ACGGTTGAAGCACTGAATGCAGTTCATGGATTCATT...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR GCA 90 bp CAGCTGCCACTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTCCCTATTATCAGACCTaGTGTGCTGTTGGGAACTAT +
Preference number: 2 (lower is better)
Translates to: QLPLCGSSCIFWMISSTAPYYQT*CAVGNY
Trigger: ATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG...AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR CCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACT +
Preference number: 2 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQGLTVV*GCRMLT
Trigger: AGTCAGCATTCTACAACCCCAGACCACCGTTAATCC...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGGACTTGGTGGTAGTTaGGGAAGATGGCAATGTTTG +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKGLGGS*GRWQCL
Trigger: CAAACATTGCCATCTTCCCCAACTACCACCAAGTCC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGATAAGGAGATCCGGTTaGATTGGAATTTGCCACTGG +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLIRRSG*IGICHW
Trigger: CCAGTGGCAAATTCCAATCCAACCGGATCTCCTTAT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGAATCTGATGTGTAACTaGGGCACTCAACCCACTTTC +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLNLMCN*GTQPTF
Trigger: GAAAGTGGGTTGAGTGCCCCAGTTACACATCAGATT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAACAGTACATCCTTCTTaGAAATGGGGTAAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKTVHPS*KWGKGG
Trigger: CCCTCCTTTACCCCATTTTCAAGAAGGATGTACTGT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCATCCATTTTAGGTCACTaGCCCCACCATACTCAACCT +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPSILGH*PHHTQP
Trigger: AGGTTGAGTATGGTGGGGTCAGTGACCTAAAATGGA...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAGGTGGGACTCCATGTaGGAACTTTTGTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHRWDSM*ELLLNL
Trigger: TAAGTTCAACAAAAGTTCTCACATGGAGTCCCACCT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAAGGCTTACTCTGAAATaGCCTGTCAAAAAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQRLTLK*PVKKPD
Trigger: GTCAGGCTTTTTGACAGGTCATTTCAGAGTAAGCCT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGCAAAGACTCCATCATaGGAGCAAACAGCTAAATCA +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLAKTPS*EQTAKS
Trigger: TGATTTAGCTGTTTGCTCCCATGATGGAGTCTTTGC...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTC +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNRWCVK*PGQLAL
Trigger: GAGTGCCAACTGTCCAGGCCATTTGACACACCATCT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAAGTTCAGAGAGAGGCTaGACGAAATTCAGACATGGA +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKSSERG*TKFRHG
Trigger: TCCATGTCTGAATTTCGTCCAGCCTCTCTCTGAACT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGATCCCATCAGGTTTCTaGGAAAGCTGCACCCAAGCC +
Preference number: 2 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWIPSGF*ESCTQA
Trigger: GGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGAT...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 90 bp ATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTaGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: ILLYLLDDKFNSFSV*FRFSTHSDNPLLQV
Trigger: AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR CAA 90 bp TGGACCTGTCACATTGGCATAACTGATATTGAGACAGCTGCCACTTaGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTT +
Preference number: 2 (lower is better)
Translates to: WTCHIGITDIETAAT*WILLYLLDDKFNSF
Trigger: AAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAATGTGACAGGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGTTGCTGCTGCTTGACTaGGACCTAAACCTAAAGTGT +
Preference number: 2 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLLLLLD*DLNLKC
Trigger: ACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAA...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAAAAATATCCATTGGTTaGAGCAGTAGCAGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPKISIG*SSSSSQ
Trigger: CTGGCTGCTGCTACTGCTGCAACCAATGGATATTTT...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAATGAAGAATGGGCCATaGCCAGCATGCAGCATTATT +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPMKNGP*PACSII
Trigger: AATAATGCTGCATGCTGGCCATGGCCCATTCTTCAT...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACCTTGGATCCATCTGTaGACTTTTCTGTTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQPWIHL*TFLFLE
Trigger: TTCTAGGAACAGAAAAGTCCACAGATGGATCCAAGG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 90 bp TCAACTCCTGGTATTCCACTAATGTTTTCCCTCCTTTGCCAAGTATaGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCT +
Preference number: 2 (lower is better)
Translates to: STPGIPLMFSLLCQV*HQLSFLALLFQLHP
Trigger: AGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAGGGAAAACATTAGTGGAATACCAGGAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCATCTGCAATGAATCCATaGACTGCATTCAGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPSAMNP*TAFSAS
Trigger: TGAAGCACTGAATGCAGTTCATGGATTCATTGCAGA...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp CCTGCTGTGCTGTTGGGAACTATAATCTTTACTTGTTTGATGCGATCTGGATTATCTGCAATGAATCCATaGACTGCATTCAGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: PAVLLGTIIFTCLMRSGLSAMNP*TAFSAS
Trigger: TGAAGCACTGAATGCAGTTCATGGATTCATTGCAGA...TAATCCAGATCGCATCAAACAAGTAAAGATTATAGTTCCCAACAGCACAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546546.1
3UTR-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGTTCTCCACTCACAGTaGCAACCCTCTCTTGCAAGT +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINVLHSQ*QPSLAS
Trigger: ACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAAC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATGTGTAATTAAATATTaGGCAGCCTGTGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKCVIKY*AACVAA
Trigger: AGCTGCAACACAGGCTGCTCAATATTTAATTACACA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGGCCATGGCCAGCATaGAGCATTATTTCCATTGTC +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLGPWPA*SIISIV
Trigger: GACAATGGAAATAATGCTGCATGCTGGCCATGGCCC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGTTGGATTGGAATTTaGCACTGGACCTGTCACATT +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGWIGI*HWTCHI
Trigger: AATGTGACAGGTCCAGTGGCAAATTCCAATCCAACC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR GCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGAAATTGGTCTTCAGTaGAAAGAGGAAGGCAGCCGT +
Preference number: 2 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWEIGLQ*KEEGSR
Trigger: ACGGCTGCCTTCCTCTTTGCACTGAAGACCAATTTC...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGCAAAGACTCCATCATaGGAGCAAACAGCTAAATCA +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPAKTPS*EQTAKS
Trigger: TGATTTAGCTGTTTGCTCCCATGATGGAGTCTTTGC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGAGGGTGACAGTTGTTaGGTCTTGGGAACAAAGGCT +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINEGDSC*VLGTKA
Trigger: AGCCTTTGTTCCCAAGACCCAACAACTGTCACCCTC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTCAGAGGTTAACAGATaGTGTGTCAAATGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNSEVNR*CVKWPG
Trigger: TCCAGGCCATTTGACACACCATCTGTTAACCTCTGA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGACGAAATTCAGACATaGAGCATCACACTCATTGTT +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKDEIQT*SITLIV
Trigger: AACAATGAGTGTGATGCTCCATGTCTGAATTTCGTC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTTTCTGTTCCTAGAATaGCACTGGCAGCTAGGGGAG +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLFLFLE*HWQLGE
Trigger: CTCCCCTAGCTGCCAGTGCCATTCTAGGAACAGAAA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTTTCAACTACATCCTTaGATCCATCTGTGGACTTTT +
Preference number: 2 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLFQLHP*IHLWTF
Trigger: AAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 90 bp ATTGGCATAACTGATATTGAGACAGCTGCCACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGTTC +
Preference number: 2 (lower is better)
Translates to: IGITDIETAATLWIL*YLLDDKFNSFSVLF
Trigger: GAACAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAATACTGTCTGGTTGGTaGCATAAAAATGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPILSGW*HKNAPQ
Trigger: TTGTGGAGCATTTTTATGTCACCAACCAGACAGTAT...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACTAAACCTAAAGTGTTaGGATTATATCCATAGCTGG +
Preference number: 2 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQLNLKC*DYIHSW
Trigger: CCAGCTATGGATATAATCTCAACACTTTAGGTTTAG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR TCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGAGAAAGCTGCAGAACTaGGGTAATTCGTATTCAGCG +
Preference number: 2 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWRKLQN*GNSYSA
Trigger: CGCTGAATACGAATTACCTCAGTTCTGCAGCTTTCT...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGACAGCTCCCAGTGTTaGGGAAAAGATCTTGGATCT +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLDSSQC*GKDLGS
Trigger: AGATCCAAGATCTTTTCCTCAACACTGGGAGCTGTC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTTTCCTACTTCACTGTaGCCTAAGCAGGAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNFPTSL*PKQEVR
Trigger: TCTTACTTCCTGCTTAGGGCACAGTGAAGTAGGAAA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTGTTCTTTAATTGGTTaGACAGAAAGGAGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNCSLIG*TERSSW
Trigger: CCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp TTGGGAACTATAATCTTTACTTGTTTGATGCGATCTGGATTAACGGTGGTCTGGAATGAATCCATGAACTaGATTCAGTGCTTCAACCGT +
Preference number: 2 (lower is better)
Translates to: LGTIIFTCLMRSGLTVVWNESMN*IQCFNR
Trigger: ACGGTTGAAGCACTGAATGCAGTTCATGGATTCATT...CCAGACCACCGTTAATCCAGATCGCATCAAACAAGTAAAGATTATAGTTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546546.1
3UTR-3UTR GCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGCAGCCCGAACTCCTTaGTCATATGTGATCCTTTGT +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINAARTP*SYVILC
Trigger: ACAAAGGATCACATATGAGCAAGGAGTTCGGGCTGC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGTACAGGACAGTGCTTTaGCCTCACTCCATTTTAGGT +
Preference number: 2 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWYRTVL*PHSILG
Trigger: ACCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTA...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp CCTGCTGTGCTGTTGGGAACTATAATCTTTACTTGTTTGATGCGATCTGGATTAGTCTTGGCCACATTTTaGGGCATTTCTCGAATTTTT +
Preference number: 2 (lower is better)
Translates to: PAVLLGTIIFTCLMRSGLVLATF*GISRIF
Trigger: AAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGAC...TAATCCAGATCGCATCAAACAAGTAAAGATTATAGTTCCCAACAGCACAGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546546.1
3UTR-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATATACTGTCTGGTTGGTaGCATAAAAATGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNILSGW*HKNAPQ
Trigger: TTGTGGAGCATTTTTATGTCACCAACCAGACAGTAT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGAAAAACTTCACTTCTaGAAAGTACAGTACATCCTT +
Preference number: 2 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKEKLHF*KVQYIL
Trigger: AAGGATGTACTGTACTTTGCAGAAGTGAAGTTTTTC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATTACAGGACAGTGCTTTaGCCTCACTCCATTTTAGGT +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINYRTVL*PHSILG
Trigger: ACCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTA...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATAGGTGGGACTCCATGTaGGAACTTTTGTTGAACTTA +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINRWDSM*ELLLNL
Trigger: TAAGTTCAACAAAAGTTCTCACATGGAGTCCCACCT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTTTCCTACTTCACTGTaGCCTAAGCAGGAAGTAAGA +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLFPTSL*PKQEVR
Trigger: TCTTACTTCCTGCTTAGGGCACAGTGAAGTAGGAAA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGACGAAATTCAGACATaGAGCATCACACTCATTGTT +
Preference number: 2 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWDEIQT*SITLIV
Trigger: AACAATGAGTGTGATGCTCCATGTCTGAATTTCGTC...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR CAA 90 bp GTTCCACAGTTTTTGCTTGTTTATATATCTATGGTAACCCAAGTATaGGCTTCTGTACCACTTTGTAATGAGACAATTGCCTTTCCATTG +
Preference number: 2 (lower is better)
Translates to: VPQFLLVYISMVTQV*ASVPLCNETIAFPL
Trigger: CAATGGAAAGGCAATTGTCTCATTACAAAGTGGTACAGAAGCCAATACTTGGGTTACCATAGATATATAAACAAGCAAAAACTGTGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR TCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGATACTGTCTGGTTGGTaGCATAAAAATGCTCCACAA +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLILSGW*HKNAPQ
Trigger: TTGTGGAGCATTTTTATGTCACCAACCAGACAGTAT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGAAAAACTTCACTTCTaGAAAGTACAGTACATCCTT +
Preference number: 2 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNEKLHF*KVQYIL
Trigger: AAGGATGTACTGTACTTTGCAGAAGTGAAGTTTTTC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGAGCAATAACTGGAAGTaGAGACGAAATTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: NYIFISQLLPSKARIPFLSNNWK*RRNWSS
Trigger: TGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGATGGACGTAATCAATaGGTTGAAGTTGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINDGRNQ*VEVEME
Trigger: TTCCATCTCAACTTCAACCCATTGATTACGTCCATC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGACGAAATTCAGACATaGAGCATCACACTCATTGTT +
Preference number: 2 (lower is better)
Translates to: TRYTICQNLHSYRVSTINDEIQT*SITLIV
Trigger: AACAATGAGTGTGATGCTCCATGTCTGAATTTCGTC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CCA 72 bp CAAATGTCCCCGCCGTACCACCAGCTGTGCTGCCACTaGCTGAGGCTTCACTGGCATAGGTGGCCAATAAAT +
Preference number: 3 (lower is better)
Translates to: QMSPPYHQLCCH*LRLHWHRWPIN
Trigger: ATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGGCGGGGACATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCCTGACTGGTTCTGTCTaGGCCACATTTTGGGGCATT +
Preference number: 3 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSLTGSV*ATFWGI
Trigger: AATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAG...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR GCA 72 bp TCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTaGACCCAAGCCCCTGACTGCTCCATTACAGCCTTC +
Preference number: 3 (lower is better)
Translates to: SCKLIPSGFWES*TQAPDCSITAF
Trigger: GAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR CCA 72 bp TACCTGATTAGCTCTGGAGGTGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGTTGGGGAAGATGGCAA +
Preference number: 3 (lower is better)
Translates to: YLISSGGGHGIR*RGLGGSWGRWQ
Trigger: TTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCCAGAGCTAATCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAGCATGAGGAGGTGCTaGGGGATGGATGCCCCTATG +
Preference number: 3 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHSMRRC*GMDAPM
Trigger: CATAGGGGCATCCATCCCCAAGCACCTCCTCATGCT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp AGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCACTCAGATGGAGAGGACTaGGTGGTAGTTGGGGAAGAT +
Preference number: 3 (lower is better)
Translates to: SDNPLLQVDPIRFLGKLHSDGED*VVVGED
Trigger: ATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGA...GTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR TCA 72 bp AATCTGATGTGTAACTGGGGCACTCAACCCACTTTCTaGGGATTGGCAGCCCGAACTCCTTGCTCATATGTG +
Preference number: 3 (lower is better)
Translates to: NLMCNWGTQPTF*GLAARTPCSYV
Trigger: CACATATGAGCAAGGAGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGAGTGCCCCAGTTACACATCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR GCA 72 bp TGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTaGAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGC +
Preference number: 3 (lower is better)
Translates to: CSGSPLTVTTLS*KLIPSGFWESC
Trigger: GCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR CCA 72 bp AGGTTAACAGATGGTGTGTCAAATGGCCTGGACAGTTaGCACTCAGGAGAGGTACAGAAGAGGGTGACAGTT +
Preference number: 3 (lower is better)
Translates to: RLTDGVSNGLDS*HSGEVQKRVTV
Trigger: AACTGTCACCCTCTTCTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATTTGACACACCATCTGTTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CCA 72 bp TGGGCAAACTCAGAGGTTAACAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTCAGGAGAGGTACAGAA +
Preference number: 3 (lower is better)
Translates to: WANSEVNRWCVK*PGQLALRRGTE
Trigger: TTCTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATTTGACACACCATCTGTTAACCTCTGAGTTTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CCA 72 bp GGTCATGGGATCAGATGGAGAGGACTTGGTGGTAGTTaGGGAAGATGGCAATGTTTGTTTGATGCGATCTGG +
Preference number: 3 (lower is better)
Translates to: GHGIRWRGLGGS*GRWQCLFDAIW
Trigger: CCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAAGCATGAGGAGGTGCTaGGGGATGGATGCCCCTATG +
Preference number: 3 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQSMRRC*GMDAPM
Trigger: CATAGGGGCATCCATCCCCAAGCACCTCCTCATGCT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAGGAGATCCGGTTGGATaGGAATTTGCCACTGGACCT +
Preference number: 3 (lower is better)
Translates to: ANYRVLETALAASAMLQRGDPVG*EFATGP
Trigger: AGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCC...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR TCA 72 bp GCAGCTGCTGCAGCCAAAGCCCCTGTTGCTGCTGCTTaGCTGAGACCTAAACCTAAAGTGTTGAGATTATAT +
Preference number: 3 (lower is better)
Translates to: AAAAAKAPVAAA*LRPKPKVLRLY
Trigger: ATATAATCTCAACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAACAGGGGCTTTGGCTGCAGCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGTATTAGAAACTGCATaGGCTGCTAGCGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFVLETA*AASAML
Trigger: CAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATAC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGACAGTTGTTGGGTCTaGGGAACAAAGGCTTACTCT +
Preference number: 3 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFDSCWV*GTKAYS
Trigger: AGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGTC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTCTGACTGGTTCTGTCTaGGCCACATTTTGGGGCATT +
Preference number: 3 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVLTGSV*ATFWGI
Trigger: AATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAG...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR-3UTR CAA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTGATGGCAATGTTTGTTaGATGCGATCTGGATTAACG +
Preference number: 3 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVDGNVC*MRSGLT
Trigger: CGTTAATCCAGATCGCATCAAACAAACATTGCCATC...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTTACCTTCCGATTCCTaGTGCCAGGTACGAATTCTC +
Preference number: 3 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCLPSDS*CQVRIL
Trigger: GAGAATTCGTACCTGGCACAAGGAATCGGAAGGTAA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 72 bp AATGTTTGTTTGATGCGATCTGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACTGGTTCTGTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: NVCLMRSGLTVV*GCRMLTGSVLA
Trigger: GGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 72 bp CTTCAGCAGTGTTTGCATAAGGAGATCCGGTTGGATTaGAATTTGCCACTGGACCTGTCACATTGGCATAAC +
Preference number: 3 (lower is better)
Translates to: LQQCLHKEIRLD*NLPLDLSHWHN
Trigger: GTTATGCCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCCTTATGCAAACACTGCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 72 bp TTTACTTGTTTGATGCGATCTGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACTGGTTCTGTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: FTCLMRSGLTVV*GCRMLTGSVLA
Trigger: GGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546546.1
3UTR-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAGGAGCATCACACTCATaGTTCTTTAATTGGTTGCAC +
Preference number: 3 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPGASHS*FFNWLH
Trigger: GTGCAACCAATTAAAGAACAATGAGTGTGATGCTCC...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGACAGTTGTTGGGTCTaGGGAACAAAGGCTTACTCT +
Preference number: 3 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKDSCWV*GTKAYS
Trigger: AGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGTC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGACCCTCTCTTGCAAGTaGATCCCATCAGGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLTLSCK*IPSGFW
Trigger: CCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGT...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAG +
Preference number: 3 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPTLWIL*YLLDDK
Trigger: CTTATCATCCAGAAGATACAAGAGGATCCACAAAGT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCACCCCAATCTTTGCCTTaGTTCACTGCTGACTCTGAG +
Preference number: 3 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPPQSLP*FTADSE
Trigger: CTCAGAGTCAGCAGTGAACAAAGGCAAAGATTGGGG...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATTCTTTTGTAATTCAGTaGCTCAGCCAGATGATCCAG +
Preference number: 3 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHSFVIQ*LSQMIQ
Trigger: CTGGATCATCTGGCTGAGCAACTGAATTACAAAAGA...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAAGACCTGCTGTGCTGTaGGGAACTATAATCTTTACC +
Preference number: 3 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKRPAVL*GTIIFT
Trigger: GGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR TCA 72 bp CAGAATGCATTAAAAAGACATAGAAAGCTGCAGAACTaGGGTAATTCGTATTCAGCGTGTTCACCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: QNALKRHRKLQN*GNSYSACSPAS
Trigger: GGAGGCTGGTGAACACGCTGAATACGAATTACCTCAGTTCTGCAGCTTTCTATGTCTTTTTAATGCATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGCAGCATTATTTCCATaGTCTAGTTCAGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLAALFP*SSSDGE
Trigger: TTCTCCATCTGAACTAGACAATGGAAATAATGCTGC...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGGAGCATCACACTCATaGTTCTTTAATTGGTTGCAC +
Preference number: 3 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKGASHS*FFNWLH
Trigger: GTGCAACCAATTAAAGAACAATGAGTGTGATGCTCC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR TCA 72 bp CCTTGCTCATATGTGATCCTTTGTGTAATTAAATATTaGGCAGCCTGTGTTGCAGCTGGTGTTCCAGTAATG +
Preference number: 3 (lower is better)
Translates to: PCSYVILCVIKY*AACVAAGVPVM
Trigger: CATTACTGGAACACCAGCTGCAACACAGGCTGCTCAATATTTAATTACACAAAGGATCACATATGAGCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR GCA 72 bp ATTGAAAGTCCTACAGGTAATAGCAATAACTGGAAGTaGAGACGAAATTGGTCTTCAGTGCAAAGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: IESPTGNSNNWK*RRNWSSVQRGR
Trigger: CCTTCCTCTTTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGGACTTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGTATTAGAAACTGCATaGGCTGCTAGCGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: TRYTICQNLHSYRVSTINVLETA*AASAML
Trigger: CAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATAC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGAGTGACAACCCTCTCTaGCAAGTTGATCCCATCAGG +
Preference number: 3 (lower is better)
Translates to: NYIFISQLLPSKARIPFLSDNPL*QVDPIR
Trigger: CCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGCGGTTGGATTGGAATTaGCCACTGGACCTGTCACAT +
Preference number: 3 (lower is better)
Translates to: NYIFISQLLPSKARIPFLRLDWN*PLDLSH
Trigger: ATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCG...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAACGAATTCTCCTTTTTaGGAGATCTGTATCCTTGCA +
Preference number: 3 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKTNSPF*EICILA
Trigger: TGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATTTACAGGACAGTGCTTaGGCCTCACTCCATTTTAGG +
Preference number: 3 (lower is better)
Translates to: TRYTICQNLHSYRVSTINLQDSA*ASLHFR
Trigger: CCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTAA...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTTACAGGACAGTGCTTaGGCCTCACTCCATTTTAGG +
Preference number: 3 (lower is better)
Translates to: NYIFISQLLPSKARIPFLLQDSA*ASLHFR
Trigger: CCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTAA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTGGAAGATGGCAATGTTaGTTTGATGCGATCTGGATT +
Preference number: 3 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFGRWQC*FDAIWI
Trigger: AATCCAGATCGCATCAAACAAACATTGCCATCTTCC...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 72 bp ATTGGCATAACTGATATTGAGACAGCTGCCACTTTGTaGATCCTCTTGTATCTTCTGGATGATAAGTTCAAC +
Preference number: 3 (lower is better)
Translates to: IGITDIETAATL*ILLYLLDDKFN
Trigger: GTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CCA 72 bp AGTAGGATTGAAAGTCCTACAGGTAATAGCAATAACTaGAAGTGCAGACGAAATTGGTCTTCAGTGCAAAGA +
Preference number: 3 (lower is better)
Translates to: SRIESPTGNSNN*KCRRNWSSVQR
Trigger: TCTTTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGGACTTTCAATCCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGCAGCATTATTTCCATaGTCTAGTTCAGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNAALFP*SSSDGE
Trigger: TTCTCCATCTGAACTAGACAATGGAAATAATGCTGC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGTTGTTCTTTAATTGGTaGCACAGAAAGGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWLFFNW*HRKEQL
Trigger: CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAA...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGCAGCATTATTTCCATaGTCTAGTTCAGATGGAGAA +
Preference number: 3 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWAALFP*SSSDGE
Trigger: TTCTCCATCTGAACTAGACAATGGAAATAATGCTGC...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATCACGAGATACACTATTaGTCAAAACTTACACAGCTA +
Preference number: 3 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNHEIHY*SKLTQL
Trigger: TAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGTG...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATATTTCAACTACATCCTaGGATCCATCTGTGGACTTT +
Preference number: 3 (lower is better)
Translates to: TRYTICQNLHSYRVSTINISTTS*DPSVDF
Trigger: AAAGTCCACAGATGGATCCAAGGATGTAGTTGAAAT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCACGAGATACACTATTaGTCAAAACTTACACAGCTA +
Preference number: 3 (lower is better)
Translates to: TRYTICQNLHSYRVSTINHEIHY*SKLTQL
Trigger: TAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGTG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCCCGTACCACCAGCTGTaGTGCCACTGGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSPYHQL*CHWLRL
Trigger: AAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGG...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGGGGAAGGAGGTGGATaGCGAGAGAGGAGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKGEGGG*RERSER
Trigger: CCGCTCGCTCCTCTCTCGGCATCCACCTCCTTCCCC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCCGTCTTCGCCCGTATTaGTCCTCTTGGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSRLRPY*SSWCCR
Trigger: CCGGCAGCACCAAGAGGACCAATACGGGCGAAGACG...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGGATGGATGCCCCTATaGGTGGCCTTGAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSGWMPL*VALSGQ
Trigger: TTGCCCACTCAAGGCCACTCATAGGGGCATCCATCC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCACTGCATGCACAGCATaGGGAGGTGCTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSTACTA*GGAWGW
Trigger: CCATCCCCAAGCACCTCCTCATGCTGTGCATGCAGT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTTGGGTCCCGTTCTGCTaGATGGGAGCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVWVPFC*MGAAAI
Trigger: GATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCA...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACCGTATTGGTCCTCTTaGTGCTGCCGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKPYWSS*CCRLQG
Trigger: CCCCTGAAGCCGGCAGCACCAAGAGGACCAATACGG...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCACCTGCTGCTGCTGGGTTaGCACTGGCAGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SDNPLLQVDPIRFLGKLHLLLLG*HWQLLQ
Trigger: CTGCAGCAGCTGCCAGTGCCAACCCAGCAGCAGCAG...GTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCAGTTGCTCAGCCAGATaGTCCAGAGGTAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSSCSAR*SRGSQH
Trigger: ATGCTGGCTACCTCTGGATCATCTGGCTGAGCAACT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGTGTGGGTCCCGTTCTaGTGGATGGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCVWVPF*WMGAAA
Trigger: GGCGGCAGCTCCCATCCAGCAGAACGGGACCCACAC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGGTTTCTGGGAAAGCTaGACCCAAGCCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKGFWES*TQAPDC
Trigger: GCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ATGAACTGCATTCAGTGCTTCAACCGTTCCCTGGATCAAGCACACTCGCTCAGTATTGGCTGCTGCTGCTaGTGGGTTGGCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MNCIQCFNRSLDQAHSLSIGCCC*WVGTGS
Trigger: GCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCCAAT...ACTGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCCTGCTAGCGCCATGCTaGAAAGACTCCATCATGGGA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSLLAPC*KDSIMG
Trigger: TCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAG...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAATCCCGTTCTGCTGGATaGGAGCTGCCGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKSRSAG*ELPPSC
Trigger: ACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGA...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAATGGGAACCCCAGTGTaGGTCCCGTTCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKMGTPV*VPFCWM
Trigger: CATCCAGCAGAACGGGACCCACACTGGGGTTCCCAT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGCTTCAACCGTTCCCTaGATCAAGCACACTCGCTCA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSASTVP*IKHTRS
Trigger: TGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGAGGTGGTCATGGGATCAGATGGAGAGGACTTGGTGGTAGTTGGGGAAGATGGGCTTCAACCGTTCCCTaGATCAAGCACACTCGCTCA +
Preference number: 4 (lower is better)
Translates to: GGGHGIRWRGLGGSWGRWASTVP*IKHTRS
Trigger: TGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGC...CCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGGCTGCTGCTGCTGCTaGGTTGGCACTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCGCCCC*VGTGSC
Trigger: GCAGCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGTGTGTCAAATGGCCTaGACAGTTGGCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSVCQMA*TVGTQE
Trigger: CTCCTGAGTGCCAACTGTCCAGGCCATTTGACACAC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCCCAGGTCATTGCCTGTaGAGCCAGATAAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSPGHCL*SQIKLL
Trigger: CAGCAGTTTTATCTGGCTTCACAGGCAATGACCTGG...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAATGCCGCCATCATGTTTaGAGTTCCTGCCGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKCRHHV*SSCRCY
Trigger: GTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCA...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGGCACTGGCAGCTGCTaGAGCCAAAGCCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFGTGSC*SQSPCC
Trigger: GCAACAGGGGCTTTGGCTGCAGCAGCTGCCAGTGCC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTTACCACCAGCTGTGCTaGCACTGGCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVYHQLC*HWLRLH
Trigger: GTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTA...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGCCGTACCACCAGCTGTaGTGCCACTGGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKPYHQL*CHWLRL
Trigger: AAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGG...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGCCGTACCACCAGCTGTaGTGCCACTGGCTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQPYHQL*CHWLRL
Trigger: AAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTACGG...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGACTGCATGCACAGCATaGGGAGGTGCTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKTACTA*GGAWGW
Trigger: CCATCCCCAAGCACCTCCTCATGCTGTGCATGCAGT...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAAGTTGCTCAGCCAGATaGTCCAGAGGTAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKSCSAR*SRGSQH
Trigger: ATGCTGGCTACCTCTGGATCATCTGGCTGAGCAACT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAGTGTGGGTCCCGTTCTaGTGGATGGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQVWVPF*WMGAAA
Trigger: GGCGGCAGCTCCCATCCAGCAGAACGGGACCCACAC...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGTGACAACCCTCTCTTaGAAGTTGATCCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSVTTLS*KLIPSG
Trigger: ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCAC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGAGCCAAAGCCCCTGTTaGTGCTGCTTGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLSQSPC*CCLTET
Trigger: GGTCTCAGTCAAGCAGCAGCAACAGGGGCTTTGGCT...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCTTGAGCAGCCTGTGTTaGAGCTGGTGTTCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSLSSLC*SWCSSN
Trigger: ATTACTGGAACACCAGCTGCAACACAGGCTGCTCAA...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAACGTCTTCGCCCGTATTaGTCCTCTTGGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQRLRPY*SSWCCR
Trigger: CCGGCAGCACCAAGAGGACCAATACGGGCGAAGACG...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCGTCTTCGCCCGTATTaGTCCTCTTGGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCRLRPY*SSWCCR
Trigger: CCGGCAGCACCAAGAGGACCAATACGGGCGAAGACG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSGLTVV*GCRMLT
Trigger: AGTCAGCATTCTACAACCCCAGACCACCGTTAATCC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATCTGCTGCTGCTGGGTTaGCACTGGCAGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHLLLLG*HWQLLQ
Trigger: CTGCAGCAGCTGCCAGTGCCAACCCAGCAGCAGCAG...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGGCTGCTGCTGCTGCTaGGTTGGCACTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKGCCCC*VGTGSC
Trigger: GCAGCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACCACTTTCTGAGGATTaGCAGCCCGAACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKPLSED*QPELLA
Trigger: AGCAAGGAGTTCGGGCTGCCAATCCTCAGAAAGTGG...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCACAAATGATGAAGAATaGGCCATGGCCAGCATGCAG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSTNDEE*AMASMQ
Trigger: CTGCATGCTGGCCATGGCCCATTCTTCATCATTTGT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCCCTCTCTTGCAAGTTaGTCCCATCAGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLPSLAS*SHQVSG
Trigger: CCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGG...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCAAATGTACAAACCTCTaGAGAGGTGGGACTCCATGT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSKCTNL*RGGTPC
Trigger: ACATGGAGTCCCACCTCTTCAGAGGTTTGTACATTT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGGAGTGGGGTGGGTaGAGTGAAGTAGGATTGAAA +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKQEWGG*SEVGLK
Trigger: TTTCAATCCTACTTCACTTCACCCACCCCACTCCTG...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGGTTTCTGGGAAAGCTaGACCCAAGCCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFGFWES*TQAPDC
Trigger: GCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGTGCCGCCATCATGTTTaGAGTTCCTGCCGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQCRHHV*SSCRCY
Trigger: GTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCA...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGATTGGCTGCTGCTGCTaGTGGGTTGGCACTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLIGCCC*WVGTGS
Trigger: GCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCCAAT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCAAAATATCCATTGGTTaGAGCAGTAGCAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSKISIG*SSSSSQ
Trigger: CTGGCTGCTGCTACTGCTGCAACCAATGGATATTTT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTCCCGTTCTGCTGGATaGGAGCTGCCGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCSRSAG*ELPPSC
Trigger: ACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATGGGTCCCGTTCTGCTaGATGGGAGCTGCCGCCATC +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKWVPFC*MGAAAI
Trigger: GATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCATAAGGAGATCCGGTTaGATTGGAATTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSIRRSG*IGICHW
Trigger: CCAGTGGCAAATTCCAATCCAACCGGATCTCCTTAT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCCAGCTGTGCTGCCACTaGCTGAGGCTTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFQLCCH*LRLHWH
Trigger: ATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTG...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAATTTCTGTTCCTAGAATaGCACTGGCAGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKFLFLE*HWQLGE
Trigger: CTCCCCTAGCTGCCAGTGCCATTCTAGGAACAGAAA...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCTCAGAGGTTAACAGATaGTGTGTCAAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSSEVNR*CVKWPG
Trigger: TCCAGGCCATTTGACACACCATCTGTTAACCTCTGA...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGAGGTGGTCATGGGATCAGATGGAGAGGACTTGGTGGTAGTTGGGGAAGATGGAGTTCAGAGAGAGGCTaGACGAAATTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: GGGHGIRWRGLGGSWGRWSSERG*TKFRHG
Trigger: TCCATGTCTGAATTTCGTCCAGCCTCTCTCTGAACT...CCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 72 bp GAGGTTAACAGATGGTGTGTCAAATGGCCTGGACAGTaGGCACTCAGGAGAGGTACAGAAGAGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: EVNRWCVKWPGQ*ALRRGTEEGDS
Trigger: ACTGTCACCCTCTTCTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATTTGACACACCATCTGTTAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGCTGCACCCAAGCCCCTaGCTGCTCCATTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLLHPSP*LLHYSL
Trigger: AAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAG...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGACTCAACCCACTTTCTaGGGATTGGCAGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQTQPTF*GLAART
Trigger: AGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGAGT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCAGGTGGGACTCCATGTaGGAACTTTTGTTGAACTTA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSRWDSM*ELLLNL
Trigger: TAAGTTCAACAAAAGTTCTCACATGGAGTCCCACCT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGTGTGGGTCCCGTTCTaGTGGATGGGAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNVWVPF*WMGAAA
Trigger: GGCGGCAGCTCCCATCCAGCAGAACGGGACCCACAC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAACCCAAGCCCCTGACTaGTCCATTACAGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPTQAPD*SITAFT
Trigger: TGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CAGCTGCCACTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTGGTTTCTGGGAAAGCTaGACCCAAGCCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: QLPLCGSSCIFWMISSTAGFWES*TQAPDC
Trigger: GCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACC...AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCATGTTTGCAGTTCCTaGCGCTGCTACCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCHVCSS*RCYREK
Trigger: CTTCTCCCGGTAGCAGCGGCAGGAACTGCAAACATG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAAGCCAAAGCCCCTGTTaGTGCTGCTTGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRSQSPC*CCLTET
Trigger: GGTCTCAGTCAAGCAGCAGCAACAGGGGCTTTGGCT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGCCAAAGCCCCTGTTaGTGCTGCTTGACTGAGACC +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCSQSPC*CCLTET
Trigger: GGTCTCAGTCAAGCAGCAGCAACAGGGGCTTTGGCT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGGGCACTGGCAGCTGCTaGAGCCAAAGCCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLGTGSC*SQSPCC
Trigger: GCAACAGGGGCTTTGGCTGCAGCAGCTGCCAGTGCC...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGGCACTGGCAGCTGCTaGAGCCAAAGCCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPGTGSC*SQSPCC
Trigger: GCAACAGGGGCTTTGGCTGCAGCAGCTGCCAGTGCC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTACCACCAGCTGTGCTaGCACTGGCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLYHQLC*HWLRLH
Trigger: GTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCTTTCCTACTTCACTGTaGCCTAAGCAGGAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSFPTSL*PKQEVR
Trigger: TCTTACTTCCTGCTTAGGGCACAGTGAAGTAGGAAA...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGTGGGGCCCCAATCTTTaGCTTTGTTCACTGCTGACT +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLWGPNL*LCSLLT
Trigger: AGTCAGCAGTGAACAAAGGCAAAGATTGGGGCCCCA...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATATGGGAACCCCAGTGTaGGTCCCGTTCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHMGTPV*VPFCWM
Trigger: CATCCAGCAGAACGGGACCCACACTGGGGTTCCCAT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTTTCTGGCACTGCTATTTCAACTACATCCTTGGATCCATCTGTGGACTTTTCCCGTATTGGTCCTCTTaGTGCTGCCGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFWHCYFNYILGSICGLFPYWSS*CCRLQG
Trigger: CCCCTGAAGCCGGCAGCACCAAGAGGACCAATACGG...GAAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAATAGCAGTGCCAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACCGTATTGGTCCTCTTaGTGCTGCCGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKPYWSS*CCRLQG
Trigger: CCCCTGAAGCCGGCAGCACCAAGAGGACCAATACGG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGCTGCTGCTGCTGCTaGGTTGGCACTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGCCCC*VGTGSC
Trigger: GCAGCTGCCAGTGCCAACCCAGCAGCAGCAGCAGCC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACTTCACTGGCATAGGTaGCCAATAAATTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKLHWHR*PINWLL
Trigger: CAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAG...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAATGGCTGAGGCTTCACTaGCATAGGTGGCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKWLRLH*HRWPIN
Trigger: ATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCA...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTCAGCTGTGCTGCCACTaGCTGAGGCTTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVQLCCH*LRLHWH
Trigger: ATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTG...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGCAGCTGTGCTGCCACTaGCTGAGGCTTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLQLCCH*LRLHWH
Trigger: ATGCCAGTGAAGCCTCAGCCAGTGGCAGCACAGCTG...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTTTTCTGTTCCTAGAATaGCACTGGCAGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVFLFLE*HWQLGE
Trigger: CTCCCCTAGCTGCCAGTGCCATTCTAGGAACAGAAA...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GGAGGTGGTCATGGGATCAGATGGAGAGGACTTGGTGGTAGTTGGGGAAGATGGGCACCAGTCAACTCCTaGTATTCCACTAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: GGGHGIRWRGLGGSWGRWAPVNS*YSTNVF
Trigger: GAAAACATTAGTGGAATACCAGGAGTTGACTGGTGC...CCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGCACCAGTCAACTCCTaGTATTCCACTAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSAPVNS*YSTNVF
Trigger: GAAAACATTAGTGGAATACCAGGAGTTGACTGGTGC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAAGCCTGTGTTGCAGCTaGTGTTCCAGTAATGGTTAC +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKSLCCS*CSSNGY
Trigger: GTAACCATTACTGGAACACCAGCTGCAACACAGGCT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGCAAAGACTCCATCATaGGAGCAAACAGCTAAATCA +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSAKTPS*EQTAKS
Trigger: TGATTTAGCTGTTTGCTCCCATGATGGAGTCTTTGC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCACGAGGGTGACAGTTGTTaGGTCTTGGGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: SDNPLLQVDPIRFLGKLHEGDSC*VLGTKA
Trigger: AGCCTTTGTTCCCAAGACCCAACAACTGTCACCCTC...GTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAAGGAGGGGAAGGAGGTaGATGCCGAGAGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKRRGRR*MPREER
Trigger: TCGCTCCTCTCTCGGCATCCACCTCCTTCCCCTCCT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539517.7
CDS-3UTR TCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGGGGTTGTAGAATGCTaGCTGGTTCTGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFGVVEC*LVLSWP
Trigger: TGGCCAAGACAGAACCAGTCAGCATTCTACAACCCC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGGGGTTGTAGAATGCTaGCTGGTTCTGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCGVVEC*LVLSWP
Trigger: TGGCCAAGACAGAACCAGTCAGCATTCTACAACCCC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCGGGGTTGTAGAATGCTaGCTGGTTCTGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLGVVEC*LVLSWP
Trigger: TGGCCAAGACAGAACCAGTCAGCATTCTACAACCCC...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCCCTCTCTTGCAAGTTaGTCCCATCAGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCPSLAS*SHQVSG
Trigger: CCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAGTTCTCCACTCACAGTaGCAACCCTCTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPVLHSQ*QPSLAS
Trigger: ACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAAC...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTCCTGTTGCTGCTGCTTaGCTGAGACCTAAACCTAAA +
Preference number: 4 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGPVAAA*LRPKPK
Trigger: TTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAACAGG...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCACTCAACCCACTTTCTaGGGATTGGCAGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCTQPTF*GLAART
Trigger: AGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGAGT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTCCATTTTAGGTCACTaGCCCCACCATACTCAACCT +
Preference number: 4 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGSILGH*PHHTQP
Trigger: AGGTTGAGTATGGTGGGGTCAGTGACCTAAAATGGA...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGGTACAGAAGAGGGTaGCAGTTGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFRYRRG*QLLGLG
Trigger: CCCAAGACCCAACAACTGTCACCCTCTTCTGTACCT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGGTACAGAAGAGGGTaGCAGTTGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCRYRRG*QLLGLG
Trigger: CCCAAGACCCAACAACTGTCACCCTCTTCTGTACCT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATCCCTATGAGTGGCCTTaGGTGGGCAAACTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHPYEWP*VGKLRG
Trigger: ACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGG...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGAGGGAGAGGGGCGAGTaGATGAGCGGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWRERGE*MSGRRG
Trigger: TCCCCTCCTCCCGCTCATTCACTCGCCCCTCTCCCT...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539517.7
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCAATGAATCCATGAACTaGATTCAGTGCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSNESMN*IQCFNR
Trigger: ACGGTTGAAGCACTGAATGCAGTTCATGGATTCATT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCACCCAAGCCCCTGACTaGTCCATTACAGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCTQAPD*SITAFT
Trigger: TGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCACCCAAGCCCCTGACTaGTCCATTACAGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFTQAPD*SITAFT
Trigger: TGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AGATCCGGTTGGATTGGAATTTGCCACTGGACCTGTCACATTGGCATAACTGATAACTGCTGGAAAGGCTaGAACGCCAGCAAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: RSGWIGICHWTCHIGITDNCWKG*NASKVS
Trigger: GCTAACCTTGCTGGCGTTGCAGCCTTTCCAGCAGTT...ATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGCTGCTGGATGGGAGCTaGCGCCATCATGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLLLDGS*RHHVCS
Trigger: ACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAG...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTCTGCTGGATGGGAGCTaGCGCCATCATGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVLLDGS*RHHVCS
Trigger: ACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAG...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGGGAGATCTGTATCCTTaGACCAGTCAACTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLGDLYP*TSQLLV
Trigger: TACCAGGAGTTGACTGGTGCAAGGATACAGATCTCC...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp ATTTGCCACTGGACCTGTCACATTGGCATAACTGATATTGAGACAGCTGCCACTCTGCTAGCGCCATGCTaGAAAGACTCCATCATGGGA +
Preference number: 4 (lower is better)
Translates to: ICHWTCHIGITDIETAATLLAPC*KDSIMG
Trigger: TCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAG...AGTGGCAGCTGTCTCAATATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTGGCTGCTAGCGCCATaGTGCAAAGACTCCATCATG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCWLLAP*CKDSIM
Trigger: CATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACACAGCATGAGGAGGTaGTTGGGGATGGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQHSMRR*LGMDAP
Trigger: AGGGGCATCCATCCCCAAGCACCTCCTCATGCTGTG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCATGGGGCCCCAATCTTTaGCTTTGTTCACTGCTGACT +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPWGPNL*LCSLLT
Trigger: AGTCAGCAGTGAACAAAGGCAAAGATTGGGGCCCCA...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ATGAACTGCATTCAGTGCTTCAACCGTTCCCTGGATCAAGCACACTCGCTCAGTGAAATTGGTCTTCAGTaGAAAGAGGAAGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: MNCIQCFNRSLDQAHSLSEIGLQ*KEEGSR
Trigger: ACGGCTGCCTTCCTCTTTGCACTGAAGACCAATTTC...ACTGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGAGGAGCAGCTGCAGTaGAGTGTCAGAAAGGAGACA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCEEQLQ*SVRKET
Trigger: TGTCTCCTTTCTGACACTGCACTGCAGCTGCTCCTC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539517.7
CDS-3UTR CCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAATGGGAACCCCAGTGTaGGTCCCGTTCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQMGTPV*VPFCWM
Trigger: CATCCAGCAGAACGGGACCCACACTGGGGTTCCCAT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGTCTTGGCCACATTTTaGGGCATTTCTCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSVLATF*GISRIF
Trigger: AAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGAC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCATCCCATCAGGTTTCTaGGAAAGCTGCACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFIPSGF*ESCTQA
Trigger: GGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGAT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATATCCCATCAGGTTTCTaGGAAAGCTGCACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SVLFRFSTHSDNPLLQVDIPSGF*ESCTQA
Trigger: GGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGAT...ATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCATCCCATCAGGTTTCTaGGAAAGCTGCACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLIPSGF*ESCTQA
Trigger: GGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGAT...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATCTGCTGCTGCTGGGTTaGCACTGGCAGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNLLLLG*HWQLLQ
Trigger: CTGCAGCAGCTGCCAGTGCCAACCCAGCAGCAGCAG...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTCTTCACTGGCATAGGTaGCCAATAAATTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGLHWHR*PINWLL
Trigger: CAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAG...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACCACTTTCTGAGGATTaGCAGCCCGAACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRPLSED*QPELLA
Trigger: AGCAAGGAGTTCGGGCTGCCAATCCTCAGAAAGTGG...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGACAAATGATGAAGAATaGGCCATGGCCAGCATGCAG +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLTNDEE*AMASMQ
Trigger: CTGCATGCTGGCCATGGCCCATTCTTCATCATTTGT...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 72 bp TTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTaGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LFRFSTHSDNPL*QVDPIRFLGKL
Trigger: CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGTTTCTTTTTGCAACTaGACAATTGTCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKVSFCN*TIVCPP
Trigger: GGGAGGACAGACAATTGTTCAGTTGCAAAAAGAAAC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTTGATGCGATCTGGATTAGGGGTTGTAGAATGCTaGCTGGTTCTGTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: DLVVVGEDGNVCLMRSGLGVVEC*LVLSWP
Trigger: TGGCCAAGACAGAACCAGTCAGCATTCTACAACCCC...TAATCCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTCTCCACTCACAGTaGCAACCCTCTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQVLHSQ*QPSLAS
Trigger: ACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAAC...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAACTATAATCTTTACCTaGTTAGCTCTGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKTIIFT*LALEVV
Trigger: GACCACCTCCAGAGCTAATCAGGTAAAGATTATAGT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGTCCATTTTAGGTCACTaGCCCCACCATACTCAACCT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQSILGH*PHHTQP
Trigger: AGGTTGAGTATGGTGGGGTCAGTGACCTAAAATGGA...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ATGAACTGCATTCAGTGCTTCAACCGTTCCCTGGATCAAGCACACTCGCTCAGTAGGCTTACTCTGAAATaGCCTGTCAAAAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: MNCIQCFNRSLDQAHSLSRLTLK*PVKKPD
Trigger: GTCAGGCTTTTTGACAGGTCATTTCAGAGTAAGCCT...ACTGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTCCCTATTATCAGACCTaGTGTGCTGTTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGPYYQT*CAVGNY
Trigger: ATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR GCA 90 bp TTTACTTGTTTGATGCGATCTGGATTAACGGTGGTCTGGGGTTGTAGAATGCTGACCCAAGCCCCTGACTaGTCCATTACAGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: FTCLMRSGLTVVWGCRMLTQAPD*SITAFT
Trigger: TGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGT...CAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546546.1
CDS-3UTR GCA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGGGTTTCTGGGAAAGCTaGACCCAAGCCCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLGFWES*TQAPDC
Trigger: GCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACC...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGGTGACAACCCTCTCTTaGAAGTTGATCCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKVTTLS*KLIPSG
Trigger: ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCAC...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR GCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCACACTTCAGCAGTGTTTaGATAAGGAGATCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPHFSSV*IRRSGW
Trigger: CCAACCGGATCTCCTTATGCAAACACTGCTGAAGTG...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAATGCCGCCATCATGTTTaGAGTTCCTGCCGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQCRHHV*SSCRCY
Trigger: GTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCA...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCATACCACCAGCTGTGCTaGCACTGGCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPYHQLC*HWLRLH
Trigger: GTGAAGCCTCAGCCAGTGGCAGCACAGCTGGTGGTA...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGGCAGCCCGAACTCCTTaGTCATATGTGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQAARTP*SYVILC
Trigger: ACAAAGGATCACATATGAGCAAGGAGTTCGGGCTGC...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAGCAGCCCGAACTCCTTaGTCATATGTGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPAARTP*SYVILC
Trigger: ACAAAGGATCACATATGAGCAAGGAGTTCGGGCTGC...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CAGCTGCCACTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTGCTTCAACCGTTCCCTaGATCAAGCACACTCGCTCA +
Preference number: 4 (lower is better)
Translates to: QLPLCGSSCIFWMISSTAASTVP*IKHTRS
Trigger: TGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGC...AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAGGACTTGGTGGTAGTTaGGGAAGATGGCAATGTTTG +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPGLGGS*GRWQCL
Trigger: CAAACATTGCCATCTTCCCCAACTACCACCAAGTCC...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCTCCTCTTGTATCTTCTaGATGATAAGTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSSSCIF*MISSTA
Trigger: AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGA...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAGAGATCCGGTTGGATTaGAATTTGCCACTGGACCTG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQREIRLD*NLPLDL
Trigger: CAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTC...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTTCCTAGAATGGCACTaGCAGCTAGGGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLFLEWH*QLGEKQ
Trigger: CTGCTTCTCCCCTAGCTGCCAGTGCCATTCTAGGAA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTTTCTGTTCCTAGAATaGCACTGGCAGCTAGGGGAG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCFLFLE*HWQLGE
Trigger: CTCCCCTAGCTGCCAGTGCCATTCTAGGAACAGAAA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGAGGGTGACAGTTGTTaGGTCTTGGGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCEGDSC*VLGTKA
Trigger: AGCCTTTGTTCCCAAGACCCAACAACTGTCACCCTC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGAATGGCCTGGACAGTTaGCACTCAGGAGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLNGLDS*HSGEVQ
Trigger: CTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCRWCVK*PGQLAL
Trigger: GAGTGCCAACTGTCCAGGCCATTTGACACACCATCT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAATGAGTGGCCTTGAGTaGGCAAACTCAGAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPMSGLE*ANSEVN
Trigger: GTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCAT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCACCTGCAGATGGCACAGTaGAGAAATACCTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: SDNPLLQVDPIRFLGKLHLQMAQ*RNTFCT
Trigger: TGTACAGAAGGTATTTCTCCACTGTGCCATCTGCAG...GTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTCTGCAGATGGCACAGTaGAGAAATACCTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGLQMAQ*RNTFCT
Trigger: TGTACAGAAGGTATTTCTCCACTGTGCCATCTGCAG...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp ATGAACTGCATTCAGTGCTTCAACCGTTCCCTGGATCAAGCACACTCGCTCAGTGTTTCACTCTGCAGATaGCACAGTGGAGAAATACCT +
Preference number: 4 (lower is better)
Translates to: MNCIQCFNRSLDQAHSLSVSLCR*HSGEIP
Trigger: AGGTATTTCTCCACTGTGCCATCTGCAGAGTGAAAC...ACTGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGCTGCACCCAAGCCCCTaGCTGCTCCATTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLLHPSP*LLHYSL
Trigger: AAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAG...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCATTGCTGCTGCTTGACTaGGACCTAAACCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPLLLLD*DLNLKC
Trigger: ACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAA...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCCTGTTGCTGCTGCTTaGCTGAGACCTAAACCTAAA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCPVAAA*LRPKPK
Trigger: TTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAACAGG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAACTCAACCCACTTTCTaGGGATTGGCAGCCCGAACT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKTQPTF*GLAART
Trigger: AGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGAGT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATACTGCATGCACAGCATaGGGAGGTGCTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNTACTA*GGAWGW
Trigger: CCATCCCCAAGCACCTCCTCATGCTGTGCATGCAGT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGGGCAATGCTAACCACTaGTTCCACGAGATACACTAT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQGNANH*FHEIHY
Trigger: ATAGTGTATCTCGTGGAATCAGTGGTTAGCATTGCC...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp AGATCCGGTTGGATTGGAATTTGCCACTGGACCTGTCACATTGGCATAACTGATGACAGCTCCCAGTGTTaGGGAAAAGATCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: RSGWIGICHWTCHIGITDDSSQC*GKDLGS
Trigger: AGATCCAAGATCTTTTCCTCAACACTGGGAGCTGTC...ATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGACAGCTCCCAGTGTTaGGGAAAAGATCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCDSSQC*GKDLGS
Trigger: AGATCCAAGATCTTTTCCTCAACACTGGGAGCTGTC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGGGTTGGATTGGAATTTaGCACTGGACCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKGWIGI*HWTCHI
Trigger: AATGTGACAGGTCCAGTGGCAAATTCCAATCCAACC...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCCTTCCGATTCCTTGTaGCAGGTACGAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCPSDSL*QVRILL
Trigger: AAGGAGAATTCGTACCTGGCACAAGGAATCGGAAGG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTTGAGCAGCCTGTGTTaGAGCTGGTGTTCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCLSSLC*SWCSSN
Trigger: ATTACTGGAACACCAGCTGCAACACAGGCTGCTCAA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGAAAAACTTCACTTCTaGAAAGTACAGTACATCCTT +
Preference number: 4 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSEKLHF*KVQYIL
Trigger: AAGGATGTACTGTACTTTGCAGAAGTGAAGTTTTTC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGAGACTTACAGGACAGTaGTTTGGCCTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQRLTGQ*FGLTPF
Trigger: AAATGGAGTGAGGCCAAAGCACTGTCCTGTAAGTCT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACTGCTAGCGCCATGCTaGAAAGACTCCATCATGGGA +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQLLAPC*KDSIMG
Trigger: TCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAATGGCTGCTAGCGCCATaGTGCAAAGACTCCATCATG +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQWLLAP*CKDSIM
Trigger: CATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCA...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGCACAGCATGAGGAGGTaGTTGGGGATGGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLHSMRR*LGMDAP
Trigger: AGGGGCATCCATCCCCAAGCACCTCCTCATGCTGTG...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGATGTACAATTTCTTCTaGAGCTGTCAGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQMYNFF*SCQHLG
Trigger: ACCCAGGTGCTGACAGCTGCAGAAGAAATTGTACAT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGAAATTGGTCTTCAGTaGAAAGAGGAAGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFEIGLQ*KEEGSR
Trigger: ACGGCTGCCTTCCTCTTTGCACTGAAGACCAATTTC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAAGCAATAACTGGAAGTaGAGACGAAATTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKSNNWK*RRNWSS
Trigger: TGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAATCATCTCTCAATTGCTaGCTTCGAAAGCAAGAATTC +
Preference number: 4 (lower is better)
Translates to: ETALAASAMLQRLHHGSKSSLNC*LRKQEF
Trigger: GAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGA...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTCCCGTTCTGCTGGATaGGAGCTGCCGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFSRSAG*ELPPSC
Trigger: ACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGA...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGACCTTTAGAAAATACTaGCCGTCTTCGCCCGTATTG +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQTFRKY*PSSPVL
Trigger: CAATACGGGCGAAGACGGCCAGTATTTTCTAAAGGT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGCTTCAACCGTTCCCTaGATCAAGCACACTCGCTCA +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKASTVP*IKHTRS
Trigger: TGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAATTGTTTGATGCGATCTaGATTAACGGTGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQLFDAI*INGGLG
Trigger: CCCCAGACCACCGTTAATCCAGATCGCATCAAACAA...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGATTGTTTGATGCGATCTaGATTAACGGTGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRLFDAI*INGGLG
Trigger: CCCCAGACCACCGTTAATCCAGATCGCATCAAACAA...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVGHGIR*RGLGGS
Trigger: ACTACCACCAAGTCCTCTCCATCTGATCCCATGACC...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAATCCCATCAGGTTTCTaGGAAAGCTGCACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKIPSGF*ESCTQA
Trigger: GGCTTGGGTGCAGCTTTCCCAGAAACCTGATGGGAT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCCTTCACTGGCATAGGTaGCCAATAAATTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFLHWHR*PINWLL
Trigger: CAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAG...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGATGGCTGAGGCTTCACTaGCATAGGTGGCCAATAAAT +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRWLRLH*HRWPIN
Trigger: ATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCA...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTTTCTGGCACTGCTATTTCAACTACATCCTTGGATCCATCTGTGGACTTTTCTTCCTAGAATGGCACTaGCAGCTAGGGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VFWHCYFNYILGSICGLFFLEWH*QLGEKQ
Trigger: CTGCTTCTCCCCTAGCTGCCAGTGCCATTCTAGGAA...GAAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAATAGCAGTGCCAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCCTTGGATCCATCTGTaGACTTTTCTGTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLPWIHL*TFLFLE
Trigger: TTCTAGGAACAGAAAAGTCCACAGATGGATCCAAGG...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACCACTTTCTGAGGATTaGCAGCCCGAACTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKPLSED*QPELLA
Trigger: AGCAAGGAGTTCGGGCTGCCAATCCTCAGAAAGTGG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAAATGGCCTGGACAGTTaGCACTCAGGAGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQNGLDS*HSGEVQ
Trigger: CTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAATGAGTGGCCTTGAGTaGGCAAACTCAGAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRMSGLE*ANSEVN
Trigger: GTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCAT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGGCATGGGCTCCACAGTaGACTACTGGAATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKAWAPQ*TTGILK
Trigger: TTTCAAAATTCCAGTAGTCCACTGTGGAGCCCATGC...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGTTACATGCCTACCTGTaGCAGTTTGAAGCCATACTA +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLLHAYL*QFEAIL
Trigger: TAGTATGGCTTCAAACTGCCACAGGTAGGCATGTAA...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGATGTGATGGGAAGCTaGAAGGAGTCGAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQDVMGS*KESNKQ
Trigger: CTGCTTATTCGACTCCTTCCAGCTTCCCATCACATC...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 72 bp GTAACACTTCAGCAGTGTTTGCATAAGGAGATCCGGTaGGATTGGAATTTGCCACTGGACCTGTCACATTGG +
Preference number: 4 (lower is better)
Translates to: VTLQQCLHKEIR*DWNLPLDLSHW
Trigger: CCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCCTTATGCAAACACTGCTGAAGTGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 72 bp TTCCGATTCCTTGTGCCAGGTACGAATTCTCCTTTTTaGGAGATCTGTATCCTTGCACCAGTCAACTCCTGG +
Preference number: 4 (lower is better)
Translates to: FRFLVPGTNSPF*EICILAPVNSW
Trigger: CCAGGAGTTGACTGGTGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGTACCTGGCACAAGGAATCGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGATTGCTGCTGCTTGACTaGGACCTAAACCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRLLLLD*DLNLKC
Trigger: ACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAA...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCACAGTACATCCTTCTTaGAAATGGGGTAAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFTVHPS*KWGKGG
Trigger: CCCTCCTTTACCCCATTTTCAAGAAGGATGTACTGT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAACAGTACATCCTTCTTaGAAATGGGGTAAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRTVHPS*KWGKGG
Trigger: CCCTCCTTTACCCCATTTTCAAGAAGGATGTACTGT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAAGGTGGGACTCCATGTaGGAACTTTTGTTGAACTTA +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPRWDSM*ELLLNL
Trigger: TAAGTTCAACAAAAGTTCTCACATGGAGTCCCACCT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAAATGTACAAACCTCTaGAGAGGTGGGACTCCATGT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCKCTNL*RGGTPC
Trigger: ACATGGAGTCCCACCTCTTCAGAGGTTTGTACATTT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTCCCTATGAGTGGCCTTaGGTGGGCAAACTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFPYEWP*VGKLRG
Trigger: ACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGG...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp AGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCACCTACCTGTGGCAGTTTaGAGCCATACTAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: SDNPLLQVDPIRFLGKLHLPVAV*SHTNFL
Trigger: AAGAAAATTAGTATGGCTTCAAACTGCCACAGGTAG...GTGCAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGAAAGCTGCAGAACTaGGGTAATTCGTATTCAGCG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCRKLQN*GNSYSA
Trigger: CGCTGAATACGAATTACCTCAGTTCTGCAGCTTTCT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTATCTATTGTAAGCAATaGGTCGAAATGAGCCGTTAC +
Preference number: 4 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVIYCKQ*VEMSRY
Trigger: GTAACGGCTCATTTCGACTCATTGCTTACAATAGAT...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAATGAACTGCATTCAGTaGTTCAACCGTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRMNCIQ*FNRSLD
Trigger: ATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCCCCTATTATCAGACCTaGTGTGCTGTTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFPYYQT*CAVGNY
Trigger: ATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAGGTTGGATTGGAATTTaGCACTGGACCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRGWIGI*HWTCHI
Trigger: AATGTGACAGGTCCAGTGGCAAATTCCAATCCAACC...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAAAAATATCCATTGGTTaGAGCAGTAGCAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRKISIG*SSSSSQ
Trigger: CTGGCTGCTGCTACTGCTGCAACCAATGGATATTTT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGAGATCTGTATCCTTaGACCAGTCAACTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLGDLYP*TSQLLV
Trigger: TACCAGGAGTTGACTGGTGCAAGGATACAGATCTCC...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAAAATTCCAGATGAAATaGATGGGCTCCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRKFQMK*MGSTVD
Trigger: GTCCACTGTGGAGCCCATGCATTTCATCTGGAATTT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGATCCGGTTGGATTGGAATTTGCCACTGGACCTGTCACATTGGCATAACTGATACCTTTAGAAAATACTaGCCGTCTTCGCCCGTATTG +
Preference number: 4 (lower is better)
Translates to: RSGWIGICHWTCHIGITDTFRKY*PSSPVL
Trigger: CAATACGGGCGAAGACGGCCAGTATTTTCTAAAGGT...ATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAGGTAGTTGGGGAAGATaGCAATGTTTGTTTGATGCG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRGSWGR*QCLFDA
Trigger: CGCATCAAACAAACATTGCCATCTTCCCCAACTACC...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAATAAGGAGATCCGGTTaGATTGGAATTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRIRRSG*IGICHW
Trigger: CCAGTGGCAAATTCCAATCCAACCGGATCTCCTTAT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAATACAGGACAGTGCTTTaGCCTCACTCCATTTTAGGT +
Preference number: 4 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQYRTVL*PHSILG
Trigger: ACCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTA...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCATGAAGAATGGGCCATaGCCAGCATGCAGCATTATT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFMKNGP*PACSII
Trigger: AATAATGCTGCATGCTGGCCATGGCCCATTCTTCAT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATTCAGAGGTTAACAGATaGTGTGTCAAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SVLFRFSTHSDNPLLQVDSEVNR*CVKWPG
Trigger: TCCAGGCCATTTGACACACCATCTGTTAACCTCTGA...ATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGTTCAGAGAGAGGCTaGACGAAATTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCSSERG*TKFRHG
Trigger: TCCATGTCTGAATTTCGTCCAGCCTCTCTCTGAACT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGCAGCTGTCAGCACCTaGGTAAAAATCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFAAVST*VKIFGL
Trigger: AAGTCCAAAGATTTTTACCCAGGTGCTGACAGCTGC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATGCAGCTGTCAGCACCTaGGTAAAAATCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SVLFRFSTHSDNPLLQVDAAVST*VKIFGL
Trigger: AAGTCCAAAGATTTTTACCCAGGTGCTGACAGCTGC...ATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCACTTTTTCAAACTAAGTaGGGCCCCAATCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPLFQTK*GPNLCL
Trigger: AAGGCAAAGATTGGGGCCCCACTTAGTTTGAAAAAG...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGCATGGGCTCCACAGTaGACTACTGGAATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFAWAPQ*TTGILK
Trigger: TTTCAAAATTCCAGTAGTCCACTGTGGAGCCCATGC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGAAGTGCAGACGAAATTaGTCTTCAGTGCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQKCRRN*SSVQRG
Trigger: TCCTCTTTGCACTGAAGACCAATTTCGTCTGCACTT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCTCTGCAATGAATCCATaGACTGCATTCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFSAMNP*TAFSAS
Trigger: TGAAGCACTGAATGCAGTTCATGGATTCATTGCAGA...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTCCCTCTCTTGCAAGTTaGTCCCATCAGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFPSLAS*SHQVSG
Trigger: CCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGG...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGTGTGTAATTAAATATTaGGCAGCCTGTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQCVIKY*AACVAA
Trigger: AGCTGCAACACAGGCTGCTCAATATTTAATTACACA...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCAGGTGGGACTCCATGTaGGAACTTTTGTTGAACTTA +
Preference number: 4 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLRWDSM*ELLLNL
Trigger: TAAGTTCAACAAAAGTTCTCACATGGAGTCCCACCT...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTTGATGCGATCTGGATTAGGCAATGCTAACCACTaGTTCCACGAGATACACTAT +
Preference number: 4 (lower is better)
Translates to: DLVVVGEDGNVCLMRSGLGNANH*FHEIHY
Trigger: ATAGTGTATCTCGTGGAATCAGTGGTTAGCATTGCC...TAATCCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATTTGGATCAGTACAGCTaGACAGCCATTGTTACATGC +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHLDQYS*TAIVTC
Trigger: GCATGTAACAATGGCTGTTCAGCTGTACTGATCCAA...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTTGATGCGATCTGGATTAAGAAAGCTGCAGAACTaGGGTAATTCGTATTCAGCG +
Preference number: 4 (lower is better)
Translates to: DLVVVGEDGNVCLMRSGLRKLQN*GNSYSA
Trigger: CGCTGAATACGAATTACCTCAGTTCTGCAGCTTTCT...TAATCCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTAGTTTGTTACAGATGTaGTGGGAAGCTGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVSLLQM*WEAGRS
Trigger: ACTCCTTCCAGCTTCCCATCACATCTGTAACAAACT...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTATGAACTGCATTCAGTaGTTCAACCGTTCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVMNCIQ*FNRSLD
Trigger: ATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCAT...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATAACTGCTGGAAAGGCTaGAACGCCAGCAAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNNCWKG*NASKVS
Trigger: GCTAACCTTGCTGGCGTTGCAGCCTTTCCAGCAGTT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACCTTCCGATTCCTTGTaGCAGGTACGAATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKPSDSL*QVRILL
Trigger: AAGGAGAATTCGTACCTGGCACAAGGAATCGGAAGG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTGGCTGCTAGCGCCATaGTGCAAAGACTCCATCATG +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNWLLAP*CKDSIM
Trigger: CATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCACAGCATGAGGAGGTaGTTGGGGATGGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINHSMRR*LGMDAP
Trigger: AGGGGCATCCATCCCCAAGCACCTCCTCATGCTGTG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTGTTCTTTAATTGGTTaGACAGAAAGGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCCSLIG*TERSSW
Trigger: CCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGTCGCTCAGTAGTACCTaGGTAAAAATCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQSLSST*VKIFGL
Trigger: AAGTCCAAAGATTTTTACCCAGGTACTACTGAGCGA...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465357.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKGLTVV*GCRMLT
Trigger: AGTCAGCATTCTACAACCCCAGACCACCGTTAATCC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGTCCTCTTGTATCTTCTaGATGATAAGTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLSSCIF*MISSTA
Trigger: AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGA...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCATTGGAATTTGCCACTaGACCTGTCACATTGGCATA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCIGICH*TCHIGI
Trigger: TATGCCAATGTGACAGGTCCAGTGGCAAATTCCAAT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGAGATCCGGTTGGATTaGAATTTGCCACTGGACCTG +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPEIRLD*NLPLDL
Trigger: CAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCCTTGGATCCATCTGTaGACTTTTCTGTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCPWIHL*TFLFLE
Trigger: TTCTAGGAACAGAAAAGTCCACAGATGGATCCAAGG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAATCTGATGTGTAACTaGGGCACTCAACCCACTTTC +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHNLMCN*GTQPTF
Trigger: GAAAGTGGGTTGAGTGCCCCAGTTACACATCAGATT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATTACAGGACAGTGCTTTaGCCTCACTCCATTTTAGGT +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHYRTVL*PHSILG
Trigger: ACCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTA...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTAATGGCCTGGACAGTTaGCACTCAGGAGAGGTACAG +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFNGLDS*HSGEVQ
Trigger: CTGTACCTCTCCTGAGTGCCAACTGTCCAGGCCATT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTGTGTGTCAAATGGCCTaGACAGTTGGCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFVCQMA*TVGTQE
Trigger: CTCCTGAGTGCCAACTGTCCAGGCCATTTGACACAC...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGAGTTCAGAGAGAGGCTaGACGAAATTCAGACATGGA +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLSSERG*TKFRHG
Trigger: TCCATGTCTGAATTTCGTCCAGCCTCTCTCTGAACT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATGTTTCACTCTGCAGATaGCACAGTGGAGAAATACCT +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHVSLCR*HSGEIP
Trigger: AGGTATTTCTCCACTGTGCCATCTGCAGAGTGAAAC...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCTTTTTCAAACTAAGTaGGGCCCCAATCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCLFQTK*GPNLCL
Trigger: AAGGCAAAGATTGGGGCCCCACTTAGTTTGAAAAAG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGAAGGAGACAGGGGAATaGAGGGGGTGTGAGAGACGG +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLKETGE*RGCERR
Trigger: CCGTCTCTCACACCCCCTCCATTCCCCTGTCTCCTT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539517.7
3UTR CAA 72 bp AGACATGGAGCATCACACTCATTGTTCTTTAATTGGTaGCACAGAAAGGAGCAGCTGGGATGCCATTTAGCT +
Preference number: 4 (lower is better)
Translates to: RHGASHSLFFNW*HRKEQLGCHLA
Trigger: AGCTAAATGGCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGCCCTCTCTTGCAAGTTaGTCCCATCAGGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWPSLAS*SHQVSG
Trigger: CCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGG...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGACTATAATCTTTACCTaGTTAGCTCTGGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLTIIFT*LALEVV
Trigger: GACCACCTCCAGAGCTAATCAGGTAAAGATTATAGT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCCCTATGAGTGGCCTTaGGTGGGCAAACTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINPYEWP*VGKLRG
Trigger: ACCTCTGAGTTTGCCCACTCAAGGCCACTCATAGGG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAATTGGATCAGTACAGCTaGACAGCCATTGTTACATGC +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQLDQYS*TAIVTC
Trigger: GCATGTAACAATGGCTGTTCAGCTGTACTGATCCAA...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATCAGGAGTGGGGTGGGTaGAGTGAAGTAGGATTGAAA +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNQEWGG*SEVGLK
Trigger: TTTCAATCCTACTTCACTTCACCCACCCCACTCCTG...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACCCTATTATCAGACCTaGTGTGCTGTTGGGAACTAT +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQPYYQT*CAVGNY
Trigger: ATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGGTTGGATTGGAATTTaGCACTGGACCTGTCACATT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKGWIGI*HWTCHI
Trigger: AATGTGACAGGTCCAGTGGCAAATTCCAATCCAACC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGAACTGCTGGAAAGGCTaGAACGCCAGCAAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWNCWKG*NASKVS
Trigger: GCTAACCTTGCTGGCGTTGCAGCCTTTCCAGCAGTT...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGCTGCTGGATGGGAGCTaGCGCCATCATGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLLLDGS*RHHVCS
Trigger: ACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAG...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTTTCCTACTTCACTGTaGCCTAAGCAGGAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLFPTSL*PKQEVR
Trigger: TCTTACTTCCTGCTTAGGGCACAGTGAAGTAGGAAA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGGCCATGGCCAGCATaGAGCATTATTTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGPWPA*SIISIV
Trigger: GACAATGGAAATAATGCTGCATGCTGGCCATGGCCC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTGGGCCATGGCCAGCATaGAGCATTATTTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFGPWPA*SIISIV
Trigger: GACAATGGAAATAATGCTGCATGCTGGCCATGGCCC...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTTAAAAAGTCTAGGTaGAATGTTGTGGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGFKKSR*NVVVLK
Trigger: TTTCAGCACCACAACATTGCACCTAGACTTTTTAAA...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAGTCTTGGCCACATTTTaGGGCATTTCTCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRVLATF*GISRIF
Trigger: AAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGAC...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCGTCTTGGCCACATTTTaGGGCATTTCTCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLVLATF*GISRIF
Trigger: AAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGAC...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGHGIR*RGLGGS
Trigger: ACTACCACCAAGTCCTCTCCATCTGATCCCATGACC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATATTGGAATTTGCCACTaGACCTGTCACATTGGCATA +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHIGICH*TCHIGI
Trigger: TATGCCAATGTGACAGGTCCAGTGGCAAATTCCAAT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATACAGGACAGTGCTTTaGCCTCACTCCATTTTAGGT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKYRTVL*PHSILG
Trigger: ACCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAACAAATGATGAAGAATaGGCCATGGCCAGCATGCAG +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPTNDEE*AMASMQ
Trigger: CTGCATGCTGGCCATGGCCCATTCTTCATCATTTGT...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATGCAAAGACTCCATCATaGGAGCAAACAGCTAAATCA +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHAKTPS*EQTAKS
Trigger: TGATTTAGCTGTTTGCTCCCATGATGGAGTCTTTGC...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAACAGTTGTTGGGTCTTaGGAACAAAGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKTVVGS*EQRLTL
Trigger: CAGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGAGGGTGACAGTTGTTaGGTCTTGGGAACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNEGDSC*VLGTKA
Trigger: AGCCTTTGTTCCCAAGACCCAACAACTGTCACCCTC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLRWCVK*PGQLAL
Trigger: GAGTGCCAACTGTCCAGGCCATTTGACACACCATCT...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGACGAAATTCAGACATaGAGCATCACACTCATTGTT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCDEIQT*SITLIV
Trigger: AACAATGAGTGTGATGCTCCATGTCTGAATTTCGTC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCGACGAAATTCAGACATaGAGCATCACACTCATTGTT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFDEIQT*SITLIV
Trigger: AACAATGAGTGTGATGCTCCATGTCTGAATTTCGTC...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTTTCTGGGAAAGCTGCAAGAATTCCCTTCTTaGAGAAGACTTACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: HSDNPLLQVDPIRFLGKLQEFPS*RRLTVN
Trigger: ATTTACTGTAAGTCTTCTCCAAGAAGGGAATTCTTG...CAGCTTTCCCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 72 bp ACAAAACATGCAAATTACCGAGTATTAGAAACTGCATaGGCTGCTAGCGCCATGCTGCAAAGACTCCATCAT +
Preference number: 4 (lower is better)
Translates to: TKHANYRVLETA*AASAMLQRLHH
Trigger: ATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGCATGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
3UTR CAA 72 bp TATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTaGTTCAGGTTCTCCACTCACAGTGACAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: YLLDDKFNSFSV*FRFSTHSDNPL
Trigger: GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
3UTR CAA 72 bp TTTTCTCCATTTTGGATCAGTACAGCTGAACAGCCATaGTTACATGCCTACCTGTGGCAGTTTGAAGCCATA +
Preference number: 4 (lower is better)
Translates to: FSPFWISTAEQP*LHAYLWQFEAI
Trigger: TATGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGATCCAAAATGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGTTTCTTTTTGCAACTaGACAATTGTCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKVSFCN*TIVCPP
Trigger: GGGAGGACAGACAATTGTTCAGTTGCAAAAAGAAAC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGCCAGGTCATTGCCTGTaGAGCCAGATAAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWPGHCL*SQIKLL
Trigger: CAGCAGTTTTATCTGGCTTCACAGGCAATGACCTGG...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTAAACCTAAAGTGTTaGGATTATATCCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANYRVLETALAASAMLQRLNLKC*DYIHSW
Trigger: CCAGCTATGGATATAATCTCAACACTTTAGGTTTAG...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTGTGTAATTAAATATTaGGCAGCCTGTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLCVIKY*AACVAA
Trigger: AGCTGCAACACAGGCTGCTCAATATTTAATTACACA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGATCTATTGTAAGCAATaGGTCGAAATGAGCCGTTAC +
Preference number: 4 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLIYCKQ*VEMSRY
Trigger: GTAACGGCTCATTTCGACTCATTGCTTACAATAGAT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGAGATCTGTATCCTTaGACCAGTCAACTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGDLYP*TSQLLV
Trigger: TACCAGGAGTTGACTGGTGCAAGGATACAGATCTCC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGCAGCCCGAACTCCTTaGTCATATGTGATCCTTTGT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNAARTP*SYVILC
Trigger: ACAAAGGATCACATATGAGCAAGGAGTTCGGGCTGC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAAGACTTACAGGACAGTaGTTTGGCCTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPRLTGQ*FGLTPF
Trigger: AAATGGAGTGAGGCCAAAGCACTGTCCTGTAAGTCT...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATGTTCTTTAATTGGTTaGACAGAAAGGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKCSLIG*TERSSW
Trigger: CCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAATTTTCATCTCTCAATTaGTGCCTTCGAAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQFSSLN*CLRKQE
Trigger: TTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAA...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATTCGCTCAGTAGTACCTaGGTAAAAATCTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHSLSST*VKIFGL
Trigger: AAGTCCAAAGATTTTTACCCAGGTACTACTGAGCGA...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465357.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACT +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFGLTVV*GCRMLT
Trigger: AGTCAGCATTCTACAACCCCAGACCACCGTTAATCC...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTTGTTTGATGCGATCTaGATTAACGGTGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNLFDAI*INGGLG
Trigger: CCCCAGACCACCGTTAATCCAGATCGCATCAAACAA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CCCTATTATCAGACCTGCTGTGCTGTTGGGAACTATAATCTTTACTTGTTTGATTTGTTTGATGCGATCTaGATTAACGGTGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PYYQTCCAVGNYNLYLFDLFDAI*INGGLG
Trigger: CCCCAGACCACCGTTAATCCAGATCGCATCAAACAA...ATCAAACAAGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546546.1
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTGGACTTGGTGGTAGTTaGGGAAGATGGCAATGTTTG +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFGLGGS*GRWQCL
Trigger: CAAACATTGCCATCTTCCCCAACTACCACCAAGTCC...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTCCTCTTGTATCTTCTaGATGATAAGTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCSSCIF*MISSTA
Trigger: AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTTCCTAGAATGGCACTaGCAGCTAGGGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLFLEWH*QLGEKQ
Trigger: CTGCTTCTCCCCTAGCTGCCAGTGCCATTCTAGGAA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCTTTCAACTACATCCTTaGATCCATCTGTGGACTTTT +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFFQLHP*IHLWTF
Trigger: AAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAA...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTAGCCTGTGTTGCAGCTaGTGTTCCAGTAATGGTTAC +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFSLCCS*CSSNGY
Trigger: GTAACCATTACTGGAACACCAGCTGCAACACAGGCT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGTGTGTCAAATGGCCTaGACAGTTGGCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLVCQMA*TVGTQE
Trigger: CTCCTGAGTGCCAACTGTCCAGGCCATTTGACACAC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTATGAGTGGCCTTGAGTaGGCAAACTCAGAGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFMSGLE*ANSEVN
Trigger: GTTAACCTCTGAGTTTGCCCACTCAAGGCCACTCAT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATTACATGCCTACCTGTaGCAGTTTGAAGCCATACTA +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKLHAYL*QFEAIL
Trigger: TAGTATGGCTTCAAACTGCCACAGGTAGGCATGTAA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGGTAATAGCAATAACTaGAAGTGCAGACGAAATTGG +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVGNSNN*KCRRNW
Trigger: CCAATTTCGTCTGCACTTCCAGTTATTGCTATTACC...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGATGTGATGGGAAGCTaGAAGGAGTCGAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNDVMGS*KESNKQ
Trigger: CTGCTTATTCGACTCCTTCCAGCTTCCCATCACATC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
3UTR CAA 72 bp ACTGATATTGAGACAGCTGCCACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAGTTCAACAGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: TDIETAATLWIL*YLLDDKFNSFS
Trigger: CGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
3UTR CAA 72 bp CACATTGGCATAACTGATATTGAGACAGCTGCCACTTaGTGGATCCTCTTGTATCTTCTGGATGATAAGTTC +
Preference number: 4 (lower is better)
Translates to: HIGITDIETAAT*WILLYLLDDKF
Trigger: GAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAATGTG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGTTCTCCACTCACAGTaGCAACCCTCTCTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLVLHSQ*QPSLAS
Trigger: ACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAAC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTTGCTGCTGCTTGACTaGGACCTAAACCTAAAGTGT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNLLLLD*DLNLKC
Trigger: ACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAATGTGTAATTAAATATTaGGCAGCCTGTGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQCVIKY*AACVAA
Trigger: AGCTGCAACACAGGCTGCTCAATATTTAATTACACA...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAAATGAATCCATGAACTaGATTCAGTGCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQNESMN*IQCFNR
Trigger: ACGGTTGAAGCACTGAATGCAGTTCATGGATTCATT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGTGTTCTTTAATTGGTTaGACAGAAAGGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLCSLIG*TERSSW
Trigger: CCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACA...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR GCA 90 bp CCCTATTATCAGACCTGCTGTGCTGTTGGGAACTATAATCTTTACTTGTTTGATATGTACAATTTCTTCTaGAGCTGTCAGCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: PYYQTCCAVGNYNLYLFDMYNFF*SCQHLG
Trigger: ACCCAGGTGCTGACAGCTGCAGAAGAAATTGTACAT...ATCAAACAAGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCTGATAATAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546546.1
CDS-3UTR GCA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCTTTAAAAAGTCTAGGTaGAATGTTGTGGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFFKKSR*NVVVLK
Trigger: TTTCAGCACCACAACATTGCACCTAGACTTTTTAAA...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGAGATCCGGTTGGATTaGAATTTGCCACTGGACCTG +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINEIRLD*NLPLDL
Trigger: CAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTTTTCAACTACATCCTTaGATCCATCTGTGGACTTTT +
Preference number: 4 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVFQLHP*IHLWTF
Trigger: AAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAA...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATAATCTGATGTGTAACTaGGGCACTCAACCCACTTTC +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNNLMCN*GTQPTF
Trigger: GAAAGTGGGTTGAGTGCCCCAGTTACACATCAGATT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTATGAAGAATGGGCCATaGCCAGCATGCAGCATTATT +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFMKNGP*PACSII
Trigger: AATAATGCTGCATGCTGGCCATGGCCCATTCTTCAT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATACAGTTGTTGGGTCTTaGGAACAAAGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNTVVGS*EQRLTL
Trigger: CAGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATAGATGGTGTGTCAAATaGCCTGGACAGTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINRWCVK*PGQLAL
Trigger: GAGTGCCAACTGTCCAGGCCATTTGACACACCATCT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCTTGTGCATGGTGGTGTaGCAATATCATTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCLCMVV*QYHFKS
Trigger: ACTTTTAAAATGATATTGCCACACCACCATGCACAA...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAAAAAAGCAATGTTGCTaGTTTGTTCTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPKKQCC*FVLTGE
Trigger: CTCCCCAGTGAGAACAAACCAGCAACATTGCTTTTT...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539517.7
CDS-3UTR TCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTCTGCAATGAATCCATaGACTGCATTCAGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFSAMNP*TAFSAS
Trigger: TGAAGCACTGAATGCAGTTCATGGATTCATTGCAGA...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCCTGTTGCTGCTGCTTaGCTGAGACCTAAACCTAAA +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINPVAAA*LRPKPK
Trigger: TTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAACAGG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTCCATTTTAGGTCACTaGCCCCACCATACTCAACCT +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLSILGH*PHHTQP
Trigger: AGGTTGAGTATGGTGGGGTCAGTGACCTAAAATGGA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CCTGCTGTGCTGTTGGGAACTATAATCTTTACTTGTTTGATGCGATCTGGATTAAATGAATCCATGAACTaGATTCAGTGCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: PAVLLGTIIFTCLMRSGLNESMN*IQCFNR
Trigger: ACGGTTGAAGCACTGAATGCAGTTCATGGATTCATT...TAATCCAGATCGCATCAAACAAGTAAAGATTATAGTTCCCAACAGCACAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546546.1
CDS-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGTGACAACCCTCTCTTaGAAGTTGATCCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLVTTLS*KLIPSG
Trigger: ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCAC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCACTTCAGCAGTGTTTaGATAAGGAGATCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINHFSSV*IRRSGW
Trigger: CCAACCGGATCTCCTTATGCAAACACTGCTGAAGTG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATTTGAGCAGCCTGTGTTaGAGCTGGTGTTCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINLSSLC*SWCSSN
Trigger: ATTACTGGAACACCAGCTGCAACACAGGCTGCTCAA...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp CAGCTGCCACTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTGAAAAACTTCACTTCTaGAAAGTACAGTACATCCTT +
Preference number: 4 (lower is better)
Translates to: QLPLCGSSCIFWMISSTAEKLHF*KVQYIL
Trigger: AAGGATGTACTGTACTTTGCAGAAGTGAAGTTTTTC...AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINGLTVV*GCRMLT
Trigger: AGTCAGCATTCTACAACCCCAGACCACCGTTAATCC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGCACCAGTCAACTCCTaGTATTCCACTAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNAPVNS*YSTNVF
Trigger: GAAAACATTAGTGGAATACCAGGAGTTGACTGGTGC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATAGCCTGTGTTGCAGCTaGTGTTCCAGTAATGGTTAC +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINSLCCS*CSSNGY
Trigger: GTAACCATTACTGGAACACCAGCTGCAACACAGGCT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGATGAAGAATGGGCCATaGCCAGCATGCAGCATTATT +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWMKNGP*PACSII
Trigger: AATAATGCTGCATGCTGGCCATGGCCCATTCTTCAT...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGATGGACGTAATCAATaGGTTGAAGTTGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPDGRNQ*VEVEME
Trigger: TTCCATCTCAACTTCAACCCATTGATTACGTCCATC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGAAGTGCAGACGAAATTaGTCTTCAGTGCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLKCRRN*SSVQRG
Trigger: TCCTCTTTGCACTGAAGACCAATTTCGTCTGCACTT...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGTTTATATAGACCAGTaGAATGACATCCTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKVYIDQ*NDILSS
Trigger: ACTAGACAGGATGTCATTCCACTGGTCTATATAAAC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTATACTGTCTGGTTGGTaGCATAAAAATGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFILSGW*HKNAPQ
Trigger: TTGTGGAGCATTTTTATGTCACCAACCAGACAGTAT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATAGGCTTACTCTGAAATaGCCTGTCAAAAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINRLTLK*PVKKPD
Trigger: GTCAGGCTTTTTGACAGGTCATTTCAGAGTAAGCCT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGGCAATGCTAACCACTaGTTCCACGAGATACACTAT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINGNANH*FHEIHY
Trigger: ATAGTGTATCTCGTGGAATCAGTGGTTAGCATTGCC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATAGTTTGTTACAGATGTaGTGGGAAGCTGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINSLLQM*WEAGRS
Trigger: ACTCCTTCCAGCTTCCCATCACATCTGTAACAAACT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATAATGAATCCATGAACTaGATTCAGTGCTTCAACCGT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNNESMN*IQCFNR
Trigger: ACGGTTGAAGCACTGAATGCAGTTCATGGATTCATT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGAAAATATCCATTGGTTaGAGCAGTAGCAGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLKISIG*SSSSSQ
Trigger: CTGGCTGCTGCTACTGCTGCAACCAATGGATATTTT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATAGACTTACAGGACAGTaGTTTGGCCTCACTCCATTT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINRLTGQ*FGLTPF
Trigger: AAATGGAGTGAGGCCAAAGCACTGTCCTGTAAGTCT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGAAATTCCAGATGAAATaGATGGGCTCCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLKFQMK*MGSTVD
Trigger: GTCCACTGTGGAGCCCATGCATTTCATCTGGAATTT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATAGCAATAACTGGAAGTaGAGACGAAATTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNSNNWK*RRNWSS
Trigger: TGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCATTTTCATCTCTCAATTaGTGCCTTCGAAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPFSSLN*CLRKQE
Trigger: TTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAA...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGTCTTGGCCACATTTTaGGGCATTTCTCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNVLATF*GISRIF
Trigger: AAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGAC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGTAGTTGGGGAAGATaGCAATGTTTGTTTGATGCG +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLGSWGR*QCLFDA
Trigger: CGCATCAAACAAACATTGCCATCTTCCCCAACTACC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATATAAGGAGATCCGGTTaGATTGGAATTTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINIRRSG*IGICHW
Trigger: CCAGTGGCAAATTCCAATCCAACCGGATCTCCTTAT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGCCTTGGATCCATCTGTaGACTTTTCTGTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWPWIHL*TFLFLE
Trigger: TTCTAGGAACAGAAAAGTCCACAGATGGATCCAAGG...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATACAGTTGTTGGGTCTTaGGAACAAAGGCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINTVVGS*EQRLTL
Trigger: CAGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATTCAGAGGTTAACAGATaGTGTGTCAAATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINSEVNR*CVKWPG
Trigger: TCCAGGCCATTTGACACACCATCTGTTAACCTCTGA...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp GTTTTCTGGCACTGCTATTTCAACTACATCCTTGGATCCATCTGTGGACTTTTCTTGTGCATGGTGGTGTaGCAATATCATTTTAAAAGT +
Preference number: 4 (lower is better)
Translates to: VFWHCYFNYILGSICGLFLCMVV*QYHFKS
Trigger: ACTTTTAAAATGATATTGCCACACCACCATGCACAA...GAAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAATAGCAGTGCCAGAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGTTTCTTTTTGCAACTaGACAATTGTCTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINVSFCN*TIVCPP
Trigger: GGGAGGACAGACAATTGTTCAGTTGCAAAAAGAAAC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGCTAAACCTAAAGTGTTaGGATTATATCCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLLNLKC*DYIHSW
Trigger: CCAGCTATGGATATAATCTCAACACTTTAGGTTTAG...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CCA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTCCTCTTGTATCTTCTaGATGATAAGTTCAACAGCT +
Preference number: 4 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNSSCIF*MISSTA
Trigger: AGCTGTTGAACTTATCATCCAGAAGATACAAGAGGA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGATTGGAATTTGCCACTaGACCTGTCACATTGGCATA +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLIGICH*TCHIGI
Trigger: TATGCCAATGTGACAGGTCCAGTGGCAAATTCCAAT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGATGGACGTAATCAATaGGTTGAAGTTGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWDGRNQ*VEVEME
Trigger: TTCCATCTCAACTTCAACCCATTGATTACGTCCATC...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTGTTTATATAGACCAGTaGAATGACATCCTGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFVYIDQ*NDILSS
Trigger: ACTAGACAGGATGTCATTCCACTGGTCTATATAAAC...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATATACTGTCTGGTTGGTaGCATAAAAATGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINILSGW*HKNAPQ
Trigger: TTGTGGAGCATTTTTATGTCACCAACCAGACAGTAT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR TCA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCTACCTGTGGCAGTTTaGAGCCATACTAATTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRYTICQNLHSYRVSTINLPVAV*SHTNFL
Trigger: AAGAAAATTAGTATGGCTTCAAACTGCCACAGGTAG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTCATCTCTCAATTGCTaGCTTCGAAAGCAAGAATTC +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLSSLNC*LRKQEF
Trigger: GAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGTAATAGCAATAACTaGAAGTGCAGACGAAATTGG +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLGNSNN*KCRRNW
Trigger: CCAATTTCGTCTGCACTTCCAGTTATTGCTATTACC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR GCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGAAAAACTTCACTTCTaGAAAGTACAGTACATCCTT +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLEKLHF*KVQYIL
Trigger: AAGGATGTACTGTACTTTGCAGAAGTGAAGTTTTTC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CCA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGCAAGAATTCCCTTCTTaGAGAAGACTTACAGTAAAT +
Preference number: 4 (lower is better)
Translates to: NYIFISQLLPSKARIPFLQEFPS*RRLTVN
Trigger: ATTTACTGTAAGTCTTCTCCAAGAAGGGAATTCTTG...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS CCA 90 bp GGGCTTCCAGCGGCCTTTTCCGCGAGTCCGGCGGGTCCAGGTCTATaGGAACCCCAGTGTGGGTCCCGTTCTGCTGGATGGGAGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GLPAAFSASPAGPGL*EPQCGSRSAGWELP
Trigger: CGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCCGGACTCGCGGAAAAGGCCGCTGGAAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344429.9
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS GCA 90 bp TCCGGCGGGTCCAGGTCTATGGGAACCCCAGTGTGGGTCCCGTTCTaGTGGATGGGAGCTGCCGCCATCATGTTTGCAGTTCCTGCCGCT +
Preference number: 5 (lower is better)
Translates to: SGGSRSMGTPVWVPF*WMGAAAIMFAVPAA
Trigger: AGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS CCA 90 bp GGCGGGTCCAGGTCTATGGGAACCCCAGTGTGGGTCCCGTTCTGCTaGATGGGAGCTGCCGCCATCATGTTTGCAGTTCCTGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GGSRSMGTPVWVPFC*MGAAAIMFAVPAAA
Trigger: AGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS CCA 90 bp GGTCCAGGTCTATGGGAACCCCAGTGTGGGTCCCGTTCTGCTGGATaGGAGCTGCCGCCATCATGTTTGCAGTTCCTGCCGCTGCTACCG +
Preference number: 5 (lower is better)
Translates to: GPGLWEPQCGSRSAG*ELPPSCLQFLPLLP
Trigger: CGGTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
CDS CCA 90 bp CTTTTCCGCGAGTCCGGCGGGTCCAGGTCTATGGGAACCCCAGTGTaGGTCCCGTTCTGCTGGATGGGAGCTGCCGCCATCATGTTTGCA +
Preference number: 5 (lower is better)
Translates to: LFRESGGSRSMGTPV*VPFCWMGAAAIMFA
Trigger: TGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCCGGACTCGCGGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS GCA 90 bp GTCTATGGGAACCCCAGTGTGGGTCCCGTTCTGCTGGATGGGAGCTaGCGCCATCATGTTTGCAGTTCCTGCCGCTGCTACCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VYGNPSVGPVLLDGS*RHHVCSSCRCYREK
Trigger: CTTCTCCCGGTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
CDS GCA 90 bp AGTGTGGGTCCCGTTCTGCTGGATGGGAGCTGCCGCCATCATGTTTaGAGTTCCTGCCGCTGCTACCGGGAGAAGGTTCTCCCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: SVGPVLLDGSCRHHV*SSCRCYREKVLPFV
Trigger: AACAAAAGGGAGAACCTTCTCCCGGTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
CDS CCA 90 bp GCGGCCATCACCTCACTCCGGGGTCATCCTCCTCCTCCTCCTGAATaGACCTTCTTGCCCAGGTCTAGGATATTTACATGGTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: AAITSLRGHPPPPPE*TFLPRSRIFTWSTS
Trigger: AGAGGTTGACCATGTAAATATCCTAGACCTGGGCAAGAAGGTCCATTCAGGAGGAGGAGGAGGATGACCCCGGAGTGAGGTGATGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS-3UTR CAA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAAGCATGAGGAGGTGCTaGGGGATGGATGCCCCTATG +
Preference number: 5 (lower is better)
Translates to: ETALAASAMLQRLHHGSKSMRRC*GMDAPM
Trigger: CATAGGGGCATCCATCCCCAAGCACCTCCTCATGCT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS GCA 90 bp CCTCACTCCGGGGTCATCCTCCTCCTCCTCCTGAATGGACCTTCTTaGCCAGGTCTAGGATATTTACATGGTCAACCTCTGGACCGATTA +
Preference number: 5 (lower is better)
Translates to: PHSGVILLLLLNGPS*PGLGYLHGQPLDRL
Trigger: TAATCGGTCCAGAGGTTGACCATGTAAATATCCTAGACCTGGGCAAGAAGGTCCATTCAGGAGGAGGAGGAGGATGACCCCGGAGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGGACAGCTCCCAGTGTaGAGGAAAAGATCTTGGATC +
Preference number: 5 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSGQLPV*RKRSWI
Trigger: GATCCAAGATCTTTTCCTCAACACTGGGAGCTGTCC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGAGACAGCTGCCACTTaGTGGATCCTCTTGTATCTT +
Preference number: 5 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSETAAT*WILLYL
Trigger: AAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS CCA 90 bp AGTGCGGTAAGGGCATGCACTCATCAAGATTTTGCATACTACTTGTaGCCCAAAGCAAGAGGATGGAGAGAGGAAAAACTCTCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: SAVRACTHQDFAYYL*PKARGWREEKLSGA
Trigger: GGCGCCGGAGAGTTTTTCCTCTCTCCATCCTCTTGCTTTGGGCCACAAGTAGTATGCAAAATCTTGATGAGTGCATGCCCTTACCGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS-3UTR CAA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACCCGTATTGGTCCTCTaGGTGCTGCCGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQPVLVL*VLPASG
Trigger: CCCTGAAGCCGGCAGCACCAAGAGGACCAATACGGG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACCGTCTTCGCCCGTATaGGTCCTCTTGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKPSSPV*VLLVLP
Trigger: CGGCAGCACCAAGAGGACCAATACGGGCGAAGACGG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGTATTAGAAACTGCATaGGCTGCTAGCGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: ETALAASAMLQRLHHGSKVLETA*AASAML
Trigger: CAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATAC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AGATCCGGTTGGATTGGAATTTGCCACTGGACCTGTCACATTGGCATAACTGATAGCATGAGGAGGTGCTaGGGGATGGATGCCCCTATG +
Preference number: 5 (lower is better)
Translates to: RSGWIGICHWTCHIGITDSMRRC*GMDAPM
Trigger: CATAGGGGCATCCATCCCCAAGCACCTCCTCATGCT...ATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAAGCATGAGGAGGTGCTaGGGGATGGATGCCCCTATG +
Preference number: 5 (lower is better)
Translates to: ANYRVLETALAASAMLQRSMRRC*GMDAPM
Trigger: CATAGGGGCATCCATCCCCAAGCACCTCCTCATGCT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCACCCGTATTGGTCCTCTaGGTGCTGCCGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPPVLVL*VLPASG
Trigger: CCCTGAAGCCGGCAGCACCAAGAGGACCAATACGGG...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GGAGGTGGTCATGGGATCAGATGGAGAGGACTTGGTGGTAGTTGGGGAAGATGGGATGGCAATGTTTGTTaGATGCGATCTGGATTAACG +
Preference number: 5 (lower is better)
Translates to: GGGHGIRWRGLGGSWGRWDGNVC*MRSGLT
Trigger: CGTTAATCCAGATCGCATCAAACAAACATTGCCATC...CCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTCGGTTGGATTGGAATTaGCCACTGGACCTGTCACAT +
Preference number: 5 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVRLDWN*PLDLSH
Trigger: ATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCG...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCACAGCTGCTGCAGCAGTaGGTAACACTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPQLLQQ*VTLQQC
Trigger: ACACTGCTGAAGTGTTACCAACTGCTGCAGCAGCTG...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGGGCAGCCCGAACTCCTaGCTCATATGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQGSPNS*LICDPL
Trigger: CAAAGGATCACATATGAGCAAGGAGTTCGGGCTGCC...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAGAAGTGCAGACGAAATaGGTCTTCAGTGCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: ETALAASAMLQRLHHGSKEVQTK*VFSAKR
Trigger: CCTCTTTGCACTGAAGACCAATTTCGTCTGCACTTC...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCATGGTAACCCAAGTATaGGCTTCTGTACCACTTTGT +
Preference number: 5 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSMVTQV*ASVPLC
Trigger: ACAAAGTGGTACAGAAGCCAATACTTGGGTTACCAT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAAGCAATGTTGCTGGTTaGTTCTCACTGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: ANYRVLETALAASAMLQRSNVAG*FSLGRG
Trigger: CCCCCTCCCCAGTGAGAACAAACCAGCAACATTGCT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539517.7
CDS-3UTR CAA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGACCCTCTCTTGCAAGTaGATCCCATCAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQTLSCK*IPSGFW
Trigger: CCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGACCCTCTCTTGCAAGTaGATCCCATCAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: AFRFCSGSPLTVTTLSCKTLSCK*IPSGFW
Trigger: CCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGT...CTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGGAGATCCGGTTGGATaGGAATTTGCCACTGGACCT +
Preference number: 5 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCGDPVG*EFATGP
Trigger: AGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AGTGAGGATGTTAATGGAGTAATGACTGTTCTACTGGCCAGGCGATGGGATCAGATGGCCACCAGGTCATaGCCTGTGAAGCCAGATAAA +
Preference number: 5 (lower is better)
Translates to: SEDVNGVMTVLLARRWDQMATRS*PVKPDK
Trigger: TTTATCTGGCTTCACAGGCAATGACCTGGTGGCCAT...CTGATCCCATCGCCTGGCCAGTAGAACAGTCATTACTCCATTAACATCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCACGAATTCTCCTTTTTaGGAGATCTGTATCCTTGCA +
Preference number: 5 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSTNSPF*EICILA
Trigger: TGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGT...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AGATCCGGTTGGATTGGAATTTGCCACTGGACCTGTCACATTGGCATAACTGATGGCAGCCCGAACTCCTaGCTCATATGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: RSGWIGICHWTCHIGITDGSPNS*LICDPL
Trigger: CAAAGGATCACATATGAGCAAGGAGTTCGGGCTGCC...ATCAGTTATGCCAATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCGCAGCATTATTTCCATaGTCTAGTTCAGATGGAGAA +
Preference number: 5 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSAALFP*SSSDGE
Trigger: TTCTCCATCTGAACTAGACAATGGAAATAATGCTGC...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTTGATGCGATCTGGATTAGTGGGGCCCCAATCTTaGCCTTTGTTCACTGCTGAC +
Preference number: 5 (lower is better)
Translates to: DLVVVGEDGNVCLMRSGLVGPQS*PLFTAD
Trigger: GTCAGCAGTGAACAAAGGCAAAGATTGGGGCCCCAC...TAATCCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAACAGCTGAACAGCCATaGTTACATGCCTACCTGTGG +
Preference number: 5 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPTAEQP*LHAYLW
Trigger: CCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCAGTGACAACCCTCTCTaGCAAGTTGATCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCSDNPL*QVDPIR
Trigger: CCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCAGTGACAACCCTCTCTaGCAAGTTGATCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLSDNPL*QVDPIR
Trigger: CCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp GACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTTGATGCGATCTGGATTAGGAGATCCGGTTGGATaGGAATTTGCCACTGGACCT +
Preference number: 5 (lower is better)
Translates to: DLVVVGEDGNVCLMRSGLGDPVG*EFATGP
Trigger: AGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCC...TAATCCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACTCCTTTGCCAAGTATaGCACCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: ETALAASAMLQRLHHGSKLLCQV*HQLSFL
Trigger: CAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAG...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCATTACAGGACAGTGCTTaGGCCTCACTCCATTTTAGG +
Preference number: 5 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPLQDSA*ASLHFR
Trigger: CCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTAA...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAGACAGTTGTTGGGTCTaGGGAACAAAGGCTTACTCT +
Preference number: 5 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPDSCWV*GTKAYS
Trigger: AGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGTC...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAACAGCCACGAGATACACTATTaGTCAAAACTTACACAGCTA +
Preference number: 5 (lower is better)
Translates to: LHWLLAPCCKDSIMGANSHEIHY*SKLTQL
Trigger: TAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGTG...GCTGTTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCCCCAATCTTTGCCTTaGTTCACTGCTGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCPQSLP*FTADSE
Trigger: CTCAGAGTCAGCAGTGAACAAAGGCAAAGATTGGGG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAACAGCTGAACAGCCATaGTTACATGCCTACCTGTGG +
Preference number: 5 (lower is better)
Translates to: SFSVLFRFSTHSDNPLLQTAEQP*LHAYLW
Trigger: CCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGT...TTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAGGACAGCTCCCAGTGTaGAGGAAAAGATCTTGGATC +
Preference number: 5 (lower is better)
Translates to: ANYRVLETALAASAMLQRGQLPV*RKRSWI
Trigger: GATCCAAGATCTTTTCCTCAACACTGGGAGCTGTCC...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS GCA 90 bp CACCGACAATCTAAGTGCGGTAAGGGCATGCACTCATCAAGATTTTaGATACTACTTGTGGCCCAAAGCAAGAGGATGGAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: HRQSKCGKGMHSSRF*ILLVAQSKRMERGK
Trigger: TTTTCCTCTCTCCATCCTCTTGCTTTGGGCCACAAGTAGTATGCAAAATCTTGATGAGTGCATGCCCTTACCGCACTTAGATTGTCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS CCA 90 bp ATGATACTGTACCTGATTAGCTCTGGAGGTGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: MILYLISSGGGHGIR*RGLGGSWGRWQCLF
Trigger: AAACAAACATTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCCAGAGCTAATCAGGTACAGTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547619.5
CDS CCA 90 bp CCTCCTCCTGAATGGACCTTCTTGCCCAGGTCTAGGATATTTACATaGTCAACCTCTGGACCGATTAAATGGAAAGATAGGTCTATTCCG +
Preference number: 5 (lower is better)
Translates to: PPPEWTFLPRSRIFT*STSGPIKWKDRSIP
Trigger: CGGAATAGACCTATCTTTCCATTTAATCGGTCCAGAGGTTGACCATGTAAATATCCTAGACCTGGGCAAGAAGGTCCATTCAGGAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCCCGTATTGGTCCTCTaGGTGCTGCCGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINPVLVL*VLPASG
Trigger: CCCTGAAGCCGGCAGCACCAAGAGGACCAATACGGG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCCGTCTTCGCCCGTATaGGTCCTCTTGGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINPSSPV*VLLVLP
Trigger: CGGCAGCACCAAGAGGACCAATACGGGCGAAGACGG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATCTGACTGGTTCTGTCTaGGCCACATTTTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHLTGSV*ATFWGI
Trigger: AATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAG...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATACCCTCTCTTGCAAGTaGATCCCATCAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHTLSCK*IPSGFW
Trigger: CCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCCATAAGGAGATCCGGTaGGATTGGAATTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCHKEIR*DWNLPL
Trigger: CAGTGGCAAATTCCAATCCAACCGGATCTCCTTATG...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCACACTTCAGCAGTGTTaGCATAAGGAGATCCGGTTG +
Preference number: 5 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFTLQQC*HKEIRL
Trigger: CAACCGGATCTCCTTATGCAAACACTGCTGAAGTGT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACAGCTGCTGCAGCAGTaGGTAACACTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKQLLQQ*VTLQQC
Trigger: ACACTGCTGAAGTGTTACCAACTGCTGCAGCAGCTG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATATGGCCACCAGGTCATaGCCTGTGAAGCCAGATAAA +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHMATRS*PVKPDK
Trigger: TTTATCTGGCTTCACAGGCAATGACCTGGTGGCCAT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCTTACCTTCCGATTCCTaGTGCCAGGTACGAATTCTC +
Preference number: 5 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFLPSDS*CQVRIL
Trigger: GAGAATTCGTACCTGGCACAAGGAATCGGAAGGTAA...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTCAACAGCTTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTACAGGACAGTGCTTaGGCCTCACTCCATTTTAGG +
Preference number: 5 (lower is better)
Translates to: FNSFSVLFRFSTHSDNPLLQDSA*ASLHFR
Trigger: CCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTAA...GAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGCCCCAATCTTTGCCTTaGTTCACTGCTGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLPQSLP*FTADSE
Trigger: CTCAGAGTCAGCAGTGAACAAAGGCAAAGATTGGGG...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGTGGGGCCCCAATCTTaGCCTTTGTTCACTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPVGPQS*PLFTAD
Trigger: GTCAGCAGTGAACAAAGGCAAAGATTGGGGCCCCAC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCATCATGGGAGCAAAATTTTGTATGGCTGTTaGCCTCAGTTAAGTAACGTG +
Preference number: 5 (lower is better)
Translates to: ETALAASAMLQRLHHGSKILYGC*PQLSNV
Trigger: CACGTTACTTAACTGAGGCAAACAGCCATACAAAAT...TTTGCTCCCATGATGGAGTCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS CCA 90 bp GATATTATGCTTCTGATTAGCTCTGGAGGTGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGTTGGGGAAGATGGCAATGTTTGTTT +
Preference number: 5 (lower is better)
Translates to: DIMLLISSGGGHGIR*RGLGGSWGRWQCLF
Trigger: AAACAAACATTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCCAGAGCTAATCAGAAGCATAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344429.9
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACTGACTGGTTCTGTCTaGGCCACATTTTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKLTGSV*ATFWGI
Trigger: AATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATCAGATGGAGAGGACTaGGTGGTAGTTGGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKSDGED*VVVGED
Trigger: ATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GTTTTCTGGCACTGCTATTTCAACTACATCCTTGGATCCATCTGTGGACTTTTCACCCTCTCTTGCAAGTaGATCCCATCAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: VFWHCYFNYILGSICGLFTLSCK*IPSGFW
Trigger: CCAGAAACCTGATGGGATCAACTTGCAAGAGAGGGT...GAAAAGTCCACAGATGGATCCAAGGATGTAGTTGAAATAGCAGTGCCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAAGTGACAACCCTCTCTaGCAAGTTGATCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKSDNPL*QVDPIR
Trigger: CCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAAACAGCTTTTCGGTTTaGTTCAGGTTCTCCACTCAC +
Preference number: 5 (lower is better)
Translates to: ANYRVLETALAASAMLQRNSFSV*FRFSTH
Trigger: GTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAG +
Preference number: 5 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVTLWIL*YLLDDK
Trigger: CTTATCATCCAGAAGATACAAGAGGATCCACAAAGT...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACGGTTGGATTGGAATTaGCCACTGGACCTGTCACAT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKRLDWN*PLDLSH
Trigger: ATGTGACAGGTCCAGTGGCAAATTCCAATCCAACCG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAATGGAGATCTGTATCCTaGCACCAGTCAACTCCTGGT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKWRSVS*HQSTPG
Trigger: ACCAGGAGTTGACTGGTGCAAGGATACAGATCTCCA...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGGCAGCCCGAACTCCTaGCTCATATGTGATCCTTTG +
Preference number: 5 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPGSPNS*LICDPL
Trigger: CAAAGGATCACATATGAGCAAGGAGTTCGGGCTGCC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATTTACAGGACAGTGCTTaGGCCTCACTCCATTTTAGG +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHLQDSA*ASLHFR
Trigger: CCTAAAATGGAGTGAGGCCAAAGCACTGTCCTGTAA...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATCCCATCAGGTATTTTGTATGGCTGTTaGCCTCAGTTAAGTAACGTG +
Preference number: 5 (lower is better)
Translates to: SGSPLTVTTLSCKLIPSGILYGC*PQLSNV
Trigger: CACGTTACTTAACTGAGGCAAACAGCCATACAAAAT...ACCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGTCAGATGGAGAGGACTaGGTGGTAGTTGGGGAAGAT +
Preference number: 5 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLSDGED*VVVGED
Trigger: ATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGA...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAACAGCTTTTCGGTTTaGTTCAGGTTCTCCACTCAC +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHNSFSV*FRFSTH
Trigger: GTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTTACTTGTTTGATGCGATCTGGATTAACGGTGGTCTGGGGTTGTAGAATGCTGAACAGCTTTTCGGTTTaGTTCAGGTTCTCCACTCAC +
Preference number: 5 (lower is better)
Translates to: FTCLMRSGLTVVWGCRMLNSFSV*FRFSTH
Trigger: GTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTT...CAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546546.1
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAGAGACAGCTGCCACTTaGTGGATCCTCTTGTATCTT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKETAAT*WILLYL
Trigger: AAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTC...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATAGACCTGCTGTGCTGTaGGGAACTATAATCTTTACC +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHRPAVL*GTIIFT
Trigger: GGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAAACACTTCAGCAGTGTTaGCATAAGGAGATCCGGTTG +
Preference number: 5 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQTLQQC*HKEIRL
Trigger: CAACCGGATCTCCTTATGCAAACACTGCTGAAGTGT...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TCAGTACAGCTGAACAGCCATTGTTACATGCCTACCTGTGGCAGTTTGAAGCCAATTTCAACTACATCCTaGGATCCATCTGTGGACTTT +
Preference number: 5 (lower is better)
Translates to: SVQLNSHCYMPTCGSLKPISTTS*DPSVDF
Trigger: AAAGTCCACAGATGGATCCAAGGATGTAGTTGAAAT...TGGCTTCAAACTGCCACAGGTAGGCATGTAACAATGGCTGTTCAGCTGTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGACTCCTTTGCCAAGTATaGCACCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: ANYRVLETALAASAMLQRLLCQV*HQLSFL
Trigger: CAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAG...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCTCTTTTGTAATTCAGTaGCTCAGCCAGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFSFVIQ*LSQMIQ
Trigger: CTGGATCATCTGGCTGAGCAACTGAATTACAAAAGA...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGGGATGCGGAGCATCACACTCATaGTTCTTTAATTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: ASHSLFFNWLHRKEQLGCGASHS*FFNWLH
Trigger: GTGCAACCAATTAAAGAACAATGAGTGTGATGCTCC...GCATCCCAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TACAGCCTTCACAGTAGCACCTCCCTTCCCTATTATCAGACCTGCTGTGCTGTTCATTTCATAAGATGTTaGGCCCTTGTATCATCAGTT +
Preference number: 5 (lower is better)
Translates to: YSLHSSTSLPYYQTCCAVHFIRC*ALVSSV
Trigger: AACTGATGATACAAGGGCCAAACATCTTATGAAATG...AACAGCACAGCAGGTCTGATAATAGGGAAGGGAGGTGCTACTGTGAAGGCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GGGAAAGTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCATGGTAACCCAAGTATaGGCTTCTGTACCACTTTGT +
Preference number: 5 (lower is better)
Translates to: GKVHEDKDHSSERGWTKFMVTQV*ASVPLC
Trigger: ACAAAGTGGTACAGAAGCCAATACTTGGGTTACCAT...GAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAACTTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTCTGACTGGTTCTGTCTaGGCCACATTTTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFLTGSV*ATFWGI
Trigger: AATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAG...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGCTGACTGGTTCTGTCTaGGCCACATTTTGGGGCATT +
Preference number: 5 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLLTGSV*ATFWGI
Trigger: AATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAG...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp TTTACTTGTTTGATGCGATCTGGATTAACGGTGGTCTGGGGTTGTAGAATGCTGAGACCTGCTGTGCTGTaGGGAACTATAATCTTTACT +
Preference number: 5 (lower is better)
Translates to: FTCLMRSGLTVVWGCRMLRPAVL*GTIIFT
Trigger: AGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCT...CAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546546.1
CDS-3UTR CAA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTAGTGACAACCCTCTCTaGCAAGTTGATCCCATCAGG +
Preference number: 5 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFSDNPL*QVDPIR
Trigger: CCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTGGAGATCTGTATCCTaGCACCAGTCAACTCCTGGT +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNWRSVS*HQSTPG
Trigger: ACCAGGAGTTGACTGGTGCAAGGATACAGATCTCCA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GCAAATTACCGAGTATTAGAAACTGCATTGGCTGCTAGCGCCATGCTGCAAAGAACGAATTCTCCTTTTTaGGAGATCTGTATCCTTGCA +
Preference number: 5 (lower is better)
Translates to: ANYRVLETALAASAMLQRTNSPF*EICILA
Trigger: TGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGT...TCTTTGCAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATACTCGGTAATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGTCTTTTGTAATTCAGTaGCTCAGCCAGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLSFVIQ*LSQMIQ
Trigger: CTGGATCATCTGGCTGAGCAACTGAATTACAAAAGA...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTACCACCATTAAAATTTCCAAGGAAACATAGGGCCTGTAACGTAGGGATTCCAGAAGTGCAGACGAAATaGGTCTTCAGTGCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LPPLKFPRKHRACNVGIPEVQTK*VFSAKR
Trigger: CCTCTTTGCACTGAAGACCAATTTCGTCTGCACTTC...TGGAATCCCTACGTTACAGGCCCTATGTTTCCTTGGAAATTTTAATGGTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATGCAAGAATTCCCTTCTaGGAGAAGACTTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: SVLFRFSTHSDNPLLQVDARIPF*EKTYSK
Trigger: TTTACTGTAAGTCTTCTCCAAGAAGGGAATTCTTGC...ATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp TCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGATTTGCACTCAAAATTATaGTGTATAGCCATGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SVLFRFSTHSDNPLLQVDLHSKL*CIAMLA
Trigger: GGCAAGCATGGCTATACACAATAATTTTGAGTGCAA...ATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS TCA 90 bp ACCGTTCCCTGGATCAAGCACACTCGCTCAGTAGTACCTTATTTCTaGAATGGTTATAATAGACGTATATATTTCCAGGGTAGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: TVPWIKHTRSVVPYF*NGYNRRIYFQGSWV
Trigger: TACCCAGCTACCCTGGAAATATATACGTCTATTATAACCATTTCAGAAATAAGGTACTACTGAGCGAGTGTGCTTGATCCAGGGAACGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347476.10
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAG +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHTLWIL*YLLDDK
Trigger: CTTATCATCCAGAAGATACAAGAGGATCCACAAAGT...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGAGACAGCTGCCACTTaGTGGATCCTCTTGTATCTT +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNETAAT*WILLYL
Trigger: AAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATACACTTCAGCAGTGTTaGCATAAGGAGATCCGGTTG +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNTLQQC*HKEIRL
Trigger: CAACCGGATCTCCTTATGCAAACACTGCTGAAGTGT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCAGCTGCTGCAGCAGTaGGTAACACTTCAGCAGTGT +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINQLLQQ*VTLQQC
Trigger: ACACTGCTGAAGTGTTACCAACTGCTGCAGCAGCTG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGATTTCAACTACATCCTaGGATCCATCTGTGGACTTT +
Preference number: 5 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLISTTS*DPSVDF
Trigger: AAAGTCCACAGATGGATCCAAGGATGTAGTTGAAAT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAACTCCTTTGCCAAGTATaGCACCAACTAAGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKLLCQV*HQLSFL
Trigger: CAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAG...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGTGGAGATCTGTATCCTaGCACCAGTCAACTCCTGGT +
Preference number: 5 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWWRSVS*HQSTPG
Trigger: ACCAGGAGTTGACTGGTGCAAGGATACAGATCTCCA...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CATGGAGCATCACACTCATTGTTCTTTAATTGGTTGCACAGAAAGGAGCAGCTGACGAATTCTCCTTTTTaGGAGATCTGTATCCTTGCA +
Preference number: 5 (lower is better)
Translates to: HGASHSLFFNWLHRKEQLTNSPF*EICILA
Trigger: TGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGT...CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAATGAGTGTGATGCTCCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTTTCGGTTTTGTTCAGGTTCTCCACTCACAGTGACAACCCTCTCTTGCAAGTTGCAGCATTATTTCCATaGTCTAGTTCAGATGGAGAA +
Preference number: 5 (lower is better)
Translates to: FSVLFRFSTHSDNPLLQVAALFP*SSSDGE
Trigger: TTCTCCATCTGAACTAGACAATGGAAATAATGCTGC...AACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GTTCATGAGGACAAAGATCACAGTTCAGAGAGAGGCTGGACGAAATTCAGACATGCAGCATTATTTCCATaGTCTAGTTCAGATGGAGAA +
Preference number: 5 (lower is better)
Translates to: VHEDKDHSSERGWTKFRHAALFP*SSSDGE
Trigger: TTCTCCATCTGAACTAGACAATGGAAATAATGCTGC...ATGTCTGAATTTCGTCCAGCCTCTCTCTGAACTGTGATCTTTGTCCTCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGGTATTAGAAACTGCATaGGCTGCTAGCGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWVLETA*AASAML
Trigger: CAGCATGGCGCTAGCAGCCAATGCAGTTTCTAATAC...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAATTGTTCTTTAATTGGTaGCACAGAAAGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQLFFNW*HRKEQL
Trigger: CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAA...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGGGAAGATGGCAATGTTaGTTTGATGCGATCTGGATT +
Preference number: 5 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLGRWQC*FDAIWI
Trigger: AATCCAGATCGCATCAAACAAACATTGCCATCTTCC...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp CTTTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTAACAGCTTTTCGGTTTaGTTCAGGTTCTCCACTCAC +
Preference number: 5 (lower is better)
Translates to: LCGSSCIFWMISSTAFRFNSFSV*FRFSTH
Trigger: GTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTT...AAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000546546.1
CDS-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGATGGCCACCAGGTCATaGCCTGTGAAGCCAGATAAA +
Preference number: 5 (lower is better)
Translates to: NYIFISQLLPSKARIPFLMATRS*PVKPDK
Trigger: TTTATCTGGCTTCACAGGCAATGACCTGGTGGCCAT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TGTTCTACTGGCCAGGCGATGGGATCAGTAGTGAATTCAGTGCTTAAAAACAAAATTTCAACTACATCCTaGGATCCATCTGTGGACTTT +
Preference number: 5 (lower is better)
Translates to: CSTGQAMGSVVNSVLKNKISTTS*DPSVDF
Trigger: AAAGTCCACAGATGGATCCAAGGATGTAGTTGAAAT...TTTGTTTTTAAGCACTGAATTCACTACTGATCCCATCGCCTGGCCAGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATAGACCTGCTGTGCTGTaGGGAACTATAATCTTTACT +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNRPAVL*GTIIFT
Trigger: AGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCT...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465357.6
CDS-3UTR CAA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAG +
Preference number: 5 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLTLWIL*YLLDDK
Trigger: CTTATCATCCAGAAGATACAAGAGGATCCACAAAGT...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGCATAAGGAGATCCGGTaGGATTGGAATTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: NYIFISQLLPSKARIPFLHKEIR*DWNLPL
Trigger: CAGTGGCAAATTCCAATCCAACCGGATCTCCTTATG...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGACAGTTGTTGGGTCTaGGGAACAAAGGCTTACTCT +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINDSCWV*GTKAYS
Trigger: AGAGTAAGCCTTTGTTCCCAAGACCCAACAACTGTC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGTCTTTTGTAATTCAGTaGCTCAGCCAGATGATCCAG +
Preference number: 5 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLSFVIQ*LSQMIQ
Trigger: CTGGATCATCTGGCTGAGCAACTGAATTACAAAAGA...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTTGTTCTTTAATTGGTaGCACAGAAAGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNLFFNW*HRKEQL
Trigger: CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATGGAGCATCACACTCATaGTTCTTTAATTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNGASHS*FFNWLH
Trigger: GTGCAACCAATTAAAGAACAATGAGTGTGATGCTCC...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp TTGTGGATCCTCTTGTATCTTCTGGATGATAAGTTCAACAGCTTTTCGGTTTTGGGAGCATCACACTCATaGTTCTTTAATTGGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LWILLYLLDDKFNSFSVLGASHS*FFNWLH
Trigger: GTGCAACCAATTAAAGAACAATGAGTGTGATGCTCC...CAAAACCGAAAAGCTGTTGAACTTATCATCCAGAAGATACAAGAGGATCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp CCTACAGGTAATAGCAATAACTGGAAGTGCAGACGAAATTGGTCTTCAGTGCAACACGAGATACACTATTaGTCAAAACTTACACAGCTA +
Preference number: 5 (lower is better)
Translates to: PTGNSNNWKCRRNWSSVQHEIHY*SKLTQL
Trigger: TAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGTG...TTGCACTGAAGACCAATTTCGTCTGCACTTCCAGTTATTGCTATTACCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp CCAAGTATTGCACCAACTAAGTTTTCTGGCACTGCTATTTCAACTACATCCTTGATTTTCATCTCTCAATaGCTGCCTTCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: PSIAPTKFSGTAISTTSLIFISQ*LPSKAR
Trigger: TCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAAT...CAAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483536.6
CDS-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGAGACCTGCTGTGCTGTaGGGAACTATAATCTTTACC +
Preference number: 5 (lower is better)
Translates to: NYIFISQLLPSKARIPFLRPAVL*GTIIFT
Trigger: GGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCT...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp GATAACACTACCTCTCAAGATAAGCTGCCTCTTCTAAATAAGCATGCAGGAAATTTGCACTCAAAATTATaGTGTATAGCCATGCTTGCC +
Preference number: 5 (lower is better)
Translates to: DNTTSQDKLPLLNKHAGNLHSKL*CIAMLA
Trigger: GGCAAGCATGGCTATACACAATAATTTTGAGTGCAA...ATTTCCTGCATGCTTATTTAGAAGAGGCAGCTTATCTTGAGAGGTAGTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGATGGCAATGTTTGTTaGATGCGATCTGGATTAACG +
Preference number: 5 (lower is better)
Translates to: NYIFISQLLPSKARIPFLDGNVC*MRSGLT
Trigger: CGTTAATCCAGATCGCATCAAACAAACATTGCCATC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATGGAAGATGGCAATGTTaGTTTGATGCGATCTGGATT +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINGRWQC*FDAIWI
Trigger: AATCCAGATCGCATCAAACAAACATTGCCATCTTCC...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGACTTTGTGGATCCTCTaGTATCTTCTGGATGATAAG +
Preference number: 5 (lower is better)
Translates to: IIFSSLNCCLRKQEFPSWTLWIL*YLLDDK
Trigger: CTTATCATCCAGAAGATACAAGAGGATCCACAAAGT...CCAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGTTGTTCTTTAATTGGTaGCACAGAAAGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: NYIFISQLLPSKARIPFLLFFNW*HRKEQL
Trigger: CAGCTGCTCCTTTCTGTGCAACCAATTAAAGAACAA...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS CCA 90 bp ACACTTTTAGATGATGTTTCCCAGTTATTTGTTATTTTCTCTTATTaGGCTTTCCAGTCTAGGGCAGGTACACAAGAAACTTACAGTCTA +
Preference number: 5 (lower is better)
Translates to: TLLDDVSQLFVIFSY*AFQSRAGTQETYSL
Trigger: TAGACTGTAAGTTTCTTGTGTACCTGCCCTAGACTGGAAAGCCCAATAAGAGAAAATAACAAATAACTGGGAAACATCATCTAAAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547415.1
CDS-3UTR CAA 90 bp AATTATATTTTCATCTCTCAATTGCTGCCTTCGAAAGCAAGAATTCCCTTCTTGGCAAGAATTCCCTTCTaGGAGAAGACTTACAGTAAA +
Preference number: 5 (lower is better)
Translates to: NYIFISQLLPSKARIPFLARIPF*EKTYSK
Trigger: TTTACTGTAAGTCTTCTCCAAGAAGGGAATTCTTGC...CAAGAAGGGAATTCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAATATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATATTTTCATCTCTCAATaGCTGCCTTCGAAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINIFISQ*LPSKAR
Trigger: TCTTGCTTTCGAAGGCAGCAATTGAGAGATGAAAAT...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS-3UTR CAA 90 bp ACGAGATACACTATTTGTCAAAACTTACACAGCTACAGAGTATCGACGATAAATCATTTCATAAGATGTTaGGCCCTTGTATCATCAGTT +
Preference number: 5 (lower is better)
Translates to: TRYTICQNLHSYRVSTINHFIRC*ALVSSV
Trigger: AACTGATGATACAAGGGCCAAACATCTTATGAAATG...ATTTATCGTCGATACTCTGTAGCTGTGTAAGTTTTGACAAATAGTGTATCTCGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483536.6
ENST00000539517.7
CDS CCA 72 bp GAGTCCGGCGGGTCCAGGTCTATGGGAACCCCAGTGTaGGTCCCGTTCTGCTGGATGGGAGCTGCCGCCATC +
Preference number: 6 (lower is better)
Translates to: ESGGSRSMGTPV*VPFCWMGAAAI
Trigger: GATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCCGGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344429.9
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS GCA 72 bp CCCGTTCTGCTGGATGGGAGCTGCCGCCATCATGTTTaGAGTTCCTGCCGCTGCTACCGGGAGAAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: PVLLDGSCRHHV*SSCRCYREKVL
Trigger: GAGAACCTTCTCCCGGTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
CDS CCA 72 bp CTATGGGAACCCCAGTGTGGGTCCCGTTCTGCTGGATaGGAGCTGCCGCCATCATGTTTGCAGTTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: LWEPQCGSRSAG*ELPPSCLQFLP
Trigger: CGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS CAA 90 bp CAGTGTGGGTCCCGTTCTGCTGGATGGGAGCTGCCGCCATCATGTTaGCAGTTCCTGCCGCTGCTACCGGGAGAAGGTTCTCCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: QCGSRSAGWELPPSC*QFLPLLPGEGSPFC
Trigger: ACAAAAGGGAGAACCTTCTCCCGGTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
CDS GCA 72 bp TCCAGGTCTATGGGAACCCCAGTGTGGGTCCCGTTCTaGTGGATGGGAGCTGCCGCCATCATGTTTGCAGTT +
Preference number: 6 (lower is better)
Translates to: SRSMGTPVWVPF*WMGAAAIMFAV
Trigger: AACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS CCA 72 bp AGGTCTATGGGAACCCCAGTGTGGGTCCCGTTCTGCTaGATGGGAGCTGCCGCCATCATGTTTGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: RSMGTPVWVPFC*MGAAAIMFAVP
Trigger: AGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
ENST00000574031.1
CDS GCA 72 bp CTGGATGGGAGCTGCCGCCATCATGTTTGCAGTTCCTaGCGCTGCTACCGGGAGAAGGTTCTCCCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: LDGSCRHHVCSS*RCYREKVLPFV
Trigger: AACAAAAGGGAGAACCTTCTCCCGGTAGCAGCGGCAGGAACTGCAAACATGATGGCGGCAGCTCCCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465357.6
ENST00000483536.6
ENST00000539517.7
ENST00000547619.5
CDS CAA 90 bp ACCTCACTCCGGGGTCATCCTCCTCCTCCTCCTGAATGGACCTTCTaGCCCAGGTCTAGGATATTTACATGGTCAACCTCTGGACCGATT +
Preference number: 6 (lower is better)
Translates to: TSLRGHPPPPPEWTF*PRSRIFTWSTSGPI
Trigger: AATCGGTCCAGAGGTTGACCATGTAAATATCCTAGACCTGGGCAAGAAGGTCCATTCAGGAGGAGGAGGAGGATGACCCCGGAGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS GCA 72 bp GGGGTCATCCTCCTCCTCCTCCTGAATGGACCTTCTTaGCCAGGTCTAGGATATTTACATGGTCAACCTCTG +
Preference number: 6 (lower is better)
Translates to: GVILLLLLNGPS*PGLGYLHGQPL
Trigger: CAGAGGTTGACCATGTAAATATCCTAGACCTGGGCAAGAAGGTCCATTCAGGAGGAGGAGGAGGATGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS CCA 72 bp CTTCTGATTAGCTCTGGAGGTGGTCATGGGATCAGATaGAGAGGACTTGGTGGTAGTTGGGGAAGATGGCAA +
Preference number: 6 (lower is better)
Translates to: LLISSGGGHGIR*RGLGGSWGRWQ
Trigger: TTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTGATCCCATGACCACCTCCAGAGCTAATCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344429.9
CDS CCA 72 bp CTCACTTGTTTGATGCGATCTGGATTAACGGTGGTCTaGGGTTGTAGAATGCTGACTGGTTCTGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LTCLMRSGLTVV*GCRMLTGSVLA
Trigger: GGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGCATCAAACAAGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574031.1
CDS CAA 90 bp CTAAGTGCGGTAAGGGCATGCACTCATCAAGATTTTGCATACTACTaGTGGCCCAAAGCAAGAGGATGGAGAGAGGAAAAACTCTCCGGC +
Preference number: 6 (lower is better)
Translates to: LSAVRACTHQDFAYY*WPKARGWREEKLSG
Trigger: GCCGGAGAGTTTTTCCTCTCTCCATCCTCTTGCTTTGGGCCACAAGTAGTATGCAAAATCTTGATGAGTGCATGCCCTTACCGCACTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS GCA 72 bp TCTAAGTGCGGTAAGGGCATGCACTCATCAAGATTTTaGATACTACTTGTGGCCCAAAGCAAGAGGATGGAG +
Preference number: 6 (lower is better)
Translates to: SKCGKGMHSSRF*ILLVAQSKRME
Trigger: CTCCATCCTCTTGCTTTGGGCCACAAGTAGTATGCAAAATCTTGATGAGTGCATGCCCTTACCGCACTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS CCA 72 bp GAATGGACCTTCTTGCCCAGGTCTAGGATATTTACATaGTCAACCTCTGGACCGATTAAATGGAAAGATAGG +
Preference number: 6 (lower is better)
Translates to: EWTFLPRSRIFT*STSGPIKWKDR
Trigger: CCTATCTTTCCATTTAATCGGTCCAGAGGTTGACCATGTAAATATCCTAGACCTGGGCAAGAAGGTCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS GCA 72 bp AAATACTGGCCGTCTTCTCTGCTTCGATGCATTGGGTaGATTGTTAAGATGATTCCAGTGCAAATGAAGAAG +
Preference number: 6 (lower is better)
Translates to: KYWPSSLLRCIG*IVKMIPVQMKK
Trigger: CTTCTTCATTTGCACTGGAATCATCTTAACAATGCACCCAATGCATCGAAGCAGAGAAGACGGCCAGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549571.5
CDS GCA 72 bp AAATACCTTCTGTACAGCACCATGTACAATTTCTTCTaGAGCTGTCAGCACCTGGGTAAAAATCTTTGGACT +
Preference number: 6 (lower is better)
Translates to: KYLLYSTMYNFF*SCQHLGKNLWT
Trigger: AGTCCAAAGATTTTTACCCAGGTGCTGACAGCTGCAGAAGAAATTGTACATGGTGCTGTACAGAAGGTATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483536.6
ENST00000546546.1
ENST00000547415.1
CDS CCA 72 bp AGGATATTTACATGGTCAACCTCTGGACCGATTAAATaGAAAGATAGGTCTATTCCGAAAAACTGGTCGCCA +
Preference number: 6 (lower is better)
Translates to: RIFTWSTSGPIK*KDRSIPKNWSP
Trigger: TGGCGACCAGTTTTTCGGAATAGACCTATCTTTCCATTTAATCGGTCCAGAGGTTGACCATGTAAATATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549571.5