RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOTCH2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134250

Ensembl transcript IDs: ENST00000256646.7, ENST00000478864.1, ENST00000479412.2, ENST00000493703.1, ENST00000579475.7, ENST00000602566.6, ENST00000640021.1, ENST00000650638.1, ENST00000652302.1

Found 942 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACTCAGGCACTGACAAAGCAAGGTCAAGTATCCCCTCTGGTCCCTaGTGGTACCTCCAGGACCCACCTGTGTATGGCAGCACACAGTGG +
Preference number: 1 (lower is better)
Translates to: DSGTDKARSSIPSGP*WYLQDPPVYGSTQW
Trigger: CCACTGTGTGCTGCCATACACAGGTGGGTCCTGGAGGTACCAGCAGGGACCAGAGGGGATACTTGACCTTGCTTTGTCAGTGCCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 90 bp AGGAGCATTACAGCCCCACAGACCTGGGCACTGAGACTCAGGCACTaGCAAAGCAAGGTCAAGTATCCCCTCTGGTCCCTGCTGGTACCT +
Preference number: 1 (lower is better)
Translates to: RSITAPQTWALRLRH*QSKVKYPLWSLLVP
Trigger: AGGTACCAGCAGGGACCAGAGGGGATACTTGACCTTGCTTTGTCAGTGCCTGAGTCTCAGTGCCCAGGTCTGTGGGGCTGTAATGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CCA 90 bp TCAGGCACTGACAAAGCAAGGTCAAGTATCCCCTCTGGTCCCTGCTaGTACCTCCAGGACCCACCTGTGTATGGCAGCACACAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: SGTDKARSSIPSGPC*YLQDPPVYGSTQWQ
Trigger: TTGCCACTGTGTGCTGCCATACACAGGTGGGTCCTGGAGGTACCAGCAGGGACCAGAGGGGATACTTGACCTTGCTTTGTCAGTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 90 bp GATGGGGTCCCTCGGGGCATATACAGCGGAAACCATTCACACCGTTaGTACATGTTGCACCCTTGCGACAGGGATTGGAGGCACACTCAT +
Preference number: 1 (lower is better)
Translates to: DGVPRGIYSGNHSHR*YMLHPCDRDWRHTH
Trigger: ATGAGTGTGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCGCTGTATATGCCCCGAGGGACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 90 bp TTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAACTaGGGAGTGAGCCCTCGGAGGAGCATTACAGCCCCACAGACCTGG +
Preference number: 1 (lower is better)
Translates to: FLKAQDPVSKGRKDN*GVSPRRSITAPQTW
Trigger: CCAGGTCTGTGGGGCTGTAATGCTCCTCCGAGGGCTCACTCCTCAGTTGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 90 bp CAATCTGGTCACTGCAGATGGCGCCCATGTACCCGGGATTGCAGATaGAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGC +
Preference number: 1 (lower is better)
Translates to: QSGHCRWRPCTRDCR*RCRNQYHPDTDHGG
Trigger: GCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCAATCCCGGGTACATGGGCGCCATCTGCAGTGACCAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 90 bp CACTCACAGTGGAAGGCGCCATCCGTGTTCACACATTTTCCTGCATaGTCACAAGGATTGCTATTGGCCATGGCACATTCATCCACATCT +
Preference number: 1 (lower is better)
Translates to: HSQWKAPSVFTHFPA*SQGLLLAMAHSSTS
Trigger: AGATGTGGATGAATGTGCCATGGCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCCTTCCACTGTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 90 bp ATTCATCAATCTGGTCACTGCAGATGGCGCCCATGTACCCGGGATTaGAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCAT +
Preference number: 1 (lower is better)
Translates to: IHQSGHCRWRPCTRD*RCRCRNQYHPDTDH
Trigger: ATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCAATCCCGGGTACATGGGCGCCATCTGCAGTGACCAGATTGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CCA 90 bp ACGCAGGGTTTCCATATGGGGCCACCGACAGACAAATCAGGTAAGTaGGAAGCACTGATGCATACTTGCAGCCATAGAAGGAATGAGAAC +
Preference number: 1 (lower is better)
Translates to: TQGFHMGPPTDKSGK*EALMHTCSHRRNEN
Trigger: GTTCTCATTCCTTCTATGGCTGCAAGTATGCATCAGTGCTTCCCACTTACCTGATTTGTCTGTCGGTGGCCCCATATGGAAACCCTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp GCTATAGCAACTACTTCGCATTTCCATTGGAAGGCACCTTGTCCCTaGGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAG +
Preference number: 1 (lower is better)
Translates to: AIATTSHFHWKAPCP*ATICLSPAMASAQK
Trigger: CTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAATGCGAAGTAGTTGCTATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp AGATTGGTGAGCAGGCCTTTAAGCAGCAAGATAATCAGTAGAGACTaGTCATCTGACAAACGGAAGACAACTGTCACTGGGTCCCTTGGG +
Preference number: 1 (lower is better)
Translates to: RLVSRPLSSKIISRD*SSDKRKTTVTGSLG
Trigger: CCCAAGGGACCCAGTGACAGTTGTCTTCCGTTTGTCAGATGATCAGTCTCTACTGATTATCTTGCTGCTTAAAGGCCTGCTCACCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 90 bp GGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATaGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTATT +
Preference number: 1 (lower is better)
Translates to: GRHLVPEQPSVCHQL*LVHRRVLSFVMFPI
Trigger: AATAGGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp TCCATATGGGGCCACCGACAGACAAATCAGGTAAGTGGGAAGCACTaGTGCATACTTGCAGCCATAGAAGGAATGAGAACTGTCATTCAA +
Preference number: 1 (lower is better)
Translates to: SIWGHRQTNQVSGKH*CILAAIEGMRTVIQ
Trigger: TTGAATGACAGTTCTCATTCCTTCTATGGCTGCAAGTATGCATCAGTGCTTCCCACTTACCTGATTTGTCTGTCGGTGGCCCCATATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 90 bp CATGGATATGGCAGAAGCCTGCAGGGCTTAAAATGCAGTCCAAGCTaGAAGAATGTCTGGGCTTCAATAAGCATCCATCTTATTCTCCAA +
Preference number: 1 (lower is better)
Translates to: HGYGRSLQGLKCSPS*KNVWASISIHLILQ
Trigger: TTGGAGAATAAGATGGATGCTTATTGAAGCCCAGACATTCTTGCAGCTTGGACTGCATTTTAAGCCCTGCAGGCTTCTGCCATATCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 90 bp AAGGCATTCATTTTTGTCCACTTCACAGTTGATGCCAACCCAGCCTaGATCACAGAGACACTTATATCCACTGAGACCTCCAGTACAGTT +
Preference number: 1 (lower is better)
Translates to: KAFIFVHFTVDANPA*ITETLISTETSSTV
Trigger: AACTGTACTGGAGGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAAAAATGAATGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 90 bp AATTCACCTGTTAATATCTACAAAATGCCCAGGCAGAACTTATTTTaGAGGTGTCATGGGCATCACAGCACTGGACGGAAGTTGCAGTGT +
Preference number: 1 (lower is better)
Translates to: NSPVNIYKMPRQNLF*RCHGHHSTGRKLQC
Trigger: ACACTGCAACTTCCGTCCAGTGCTGTGATGCCCATGACACCTGCAAAATAAGTTCTGCCTGGGCATTTTGTAGATATTAACAGGTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp AAAGGCTCAACAGTTAAGACTAGTTTCATATGCTGGGTGAGTGAGTaGAACAGGCCTAGAATGCTCAGATCTGGGACAAATGTGTTCCAT +
Preference number: 1 (lower is better)
Translates to: KGSTVKTSFICWVSE*NRPRMLRSGTNVFH
Trigger: ATGGAACACATTTGTCCCAGATCTGAGCATTCTAGGCCTGTTTCACTCACTCACCCAGCATATGAAACTAGTCTTAACTGTTGAGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp ATGAAAGGAAAGGCTCAACAGTTAAGACTAGTTTCATATGCTGGGTaGGTGAGTGAAACAGGCCTAGAATGCTCAGATCTGGGACAAATG +
Preference number: 1 (lower is better)
Translates to: MKGKAQQLRLVSYAG*VSETGLECSDLGQM
Trigger: CATTTGTCCCAGATCTGAGCATTCTAGGCCTGTTTCACTCACTCACCCAGCATATGAAACTAGTCTTAACTGTTGAGCCTTTCCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp GAGATCAGTAAAAAGTTTGAAAGGCAGTGTTGTCCTCCTCATCACTaGAACCTGTTGTCTGTAATGACAGCTTTCACATTCCCTTTCTCC +
Preference number: 1 (lower is better)
Translates to: EISKKFERQCCPPHH*NLLSVMTAFTFPFS
Trigger: GGAGAAAGGGAATGTGAAAGCTGTCATTACAGACAACAGGTTTCAGTGATGAGGAGGACAACACTGCCTTTCAAACTTTTTACTGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 90 bp CAACAAACTCACACCCTTCTTCCTGGTAAAGTTTATATGAAGACCTaGACACAGACAAGAAAAATTAAGGTGCAGCCTCTTGAAGGGATC +
Preference number: 1 (lower is better)
Translates to: QQTHTLLPGKVYMKT*TQTRKIKVQPLEGI
Trigger: GATCCCTTCAAGAGGCTGCACCTTAATTTTTCTTGTCTGTGTGCAGGTCTTCATATAAACTTTACCAGGAAGAAGGGTGTGAGTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 90 bp GTGACTCTAGGAAAGGAAAATGTTCTGTTGAGTTTCTACGTTAGTTaGCAAAGGGAATGTCATGGCCGCTTCAGAGGAAAAGAAATGGTA +
Preference number: 1 (lower is better)
Translates to: VTLGKENVLLSFYVS*QRECHGRFRGKEMV
Trigger: TACCATTTCTTTTCCTCTGAAGCGGCCATGACATTCCCTTTGGCAACTAACGTAGAAACTCAACAGAACATTTTCCTTTCCTAGAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 90 bp GTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTaGGTACATAAATGTGTCCTCCCAAATAGTCATCATACATTCAAT +
Preference number: 1 (lower is better)
Translates to: VHKEVTIVPLISGGL*VHKCVLPNSHHTFN
Trigger: ATTGAATGTATGATGACTATTTGGGAGGACACATTTATGTACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp GTATGTCCATTTTCCAAAGAAACAACATACTTGAAAGGTTTGTGCTaGGAACCATACCAAAGTAAACCTTGTGAGACTCCAAGGGATACC +
Preference number: 1 (lower is better)
Translates to: VCPFSKETTYLKGLC*EPYQSKPCETPRDT
Trigger: GGTATCCCTTGGAGTCTCACAAGGTTTACTTTGGTATGGTTCTCAGCACAAACCTTTCAAGTATGTTGTTTCTTTGGAAAATGGACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp CAGAAAAACAACAAACTCACACCCTTCTTCCTGGTAAAGTTTATATaGAGACCTGCACACAGACAAGAAAAATTAAGGTGCAGCCTCTTG +
Preference number: 1 (lower is better)
Translates to: QKNNKLTPFFLVKFI*RPAHRQEKLRCSLL
Trigger: CAAGAGGCTGCACCTTAATTTTTCTTGTCTGTGTGCAGGTCTTCATATAAACTTTACCAGGAAGAAGGGTGTGAGTTTGTTGTTTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 90 bp TATGACATGATACTAAACCATACAGTCAGTCAGCCAATATATATTTaGGGGCCTAGTATATACTGGGCACTGTTTGTAGGTGTTTGGGTT +
Preference number: 1 (lower is better)
Translates to: YDMILNHTVSQPIYI*GPSIYWALFVGVWV
Trigger: AACCCAAACACCTACAAACAGTGCCCAGTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTATCATGTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR GCA 90 bp AACAGCATAATTAATATTATGACTTATATCCCAGTTCCCAATTCTTaGTATAGCAACTACTTCGCATTTCCATTGGAAGGCACCTTGTCC +
Preference number: 1 (lower is better)
Translates to: NSIINIMTYIPVPNS*YSNYFAFPLEGTLS
Trigger: GGACAAGGTGCCTTCCAATGGAAATGCGAAGTAGTTGCTATAGCAAGAATTGGGAACTGGGATATAAGTCATAATATTAATTATGCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 90 bp GTTTTGGATCATAGAAAACAAGTCCAACTTTCCAATTCCTGCACTTaGACATATAAAGTCCATGTCTTCAGTGAGAACATACTGGGTATA +
Preference number: 1 (lower is better)
Translates to: VLDHRKQVQLSNSCT*TYKVHVFSENILGI
Trigger: TATACCCAGTATGTTCTCACTGAAGACATGGACTTTATATGTTCAAGTGCAGGAATTGGAAAGTTGGACTTGTTTTCTATGATCCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 90 bp TACATAAATGTGTCCTCCCAAATAGTCATCATACATTCAATGTATTaGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTAC +
Preference number: 1 (lower is better)
Translates to: YINVSSQIVIIHSMY*LGPKSLNHLSTKHY
Trigger: GTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGTATGATGACTATTTGGGAGGACACATTTATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCACTTGAAGGGATCTCCTaGCCCCAAAATTTGTTGAAG +
Preference number: 2 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHALEGIS*PQNLLK
Trigger: CTTCAACAAATTTTGGGGGCAGGAGATCCCTTCAAG...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCACATACAGGCAGTCAATaGAATGCTTGGCAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAHTGSQ*NAWQEV
Trigger: TACTTCCTGCCAAGCATTCCATTGACTGCCTGTATG...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp CCATGTACCCGGGATTGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTAGGCCACACGGTCGATaGAGGTGGAGCCTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: PCTRDCRCRCRNQYHPDTRPHGR*RWSLEY
Trigger: GTACTCCAGGCTCCACCTGCATCGACCGTGTGGCCT...AGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCAATCCCGGGTACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTACAGGTAGCATCATTCTaGCAGGGGTCTGAATGGCAC +
Preference number: 2 (lower is better)
Translates to: VAIDQVNAATIVQARAAVQVASF*QGSEWH
Trigger: GTGCCATTCAGACCCCTGCCAGAATGATGCTACCTG...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACACCTGTGAGTAGCAGCTaGGGTGATGGGGTCCCTCGG +
Preference number: 2 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTPVSSS*GDGVPR
Trigger: CCGAGGGACCCCATCACCCCAGCTGCTACTCACAGG...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR TCA 90 bp CGGAAACCATTCACACCGTTGATACATGTTGCACCCTTGCGACAGGGATTGGAGTGCACTGGTAGCCATTaGCCAGGTCAATGCAGCGAC +
Preference number: 2 (lower is better)
Translates to: RKPFTPLIHVAPLRQGLECTGSH*PGQCSD
Trigger: GTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCA...CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCCATGTACCCGGGATTaGAGATGCAGGTGTAGGAAT +
Preference number: 2 (lower is better)
Translates to: WLAVALVAIDQVNAATIVPCTRD*RCRCRN
Trigger: ATTCCTACACCTGCATCTGCAATCCCGGGTACATGG...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp ACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTCAATGTTAGCCTCCATTGCGGTTaGCACAGGTGCCCCCATTTT +
Preference number: 2 (lower is better)
Translates to: TILTLTMVARIGVTVVNVSLHCG*HRCPHF
Trigger: AAAATGGGGGCACCTGTGCCAACCGCAATGGAGGCT...AACATTGACAACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR TCA 90 bp ACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAGACCCTCCACTCCAGCCGTTaGCACATACACAGCCATAGC +
Preference number: 2 (lower is better)
Translates to: TVDANPACITETLISTETLHSSR*HIHSHS
Trigger: GCTATGGCTGTGTATGTGTCAACGGCTGGAGTGGAG...GGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAATGACACAGGAGACCTaGCTTCCCCTCTGGGCACAT +
Preference number: 2 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTMTQET*LPLWAH
Trigger: ATGTGCCCAGAGGGGAAGGCAGGTCTCCTGTGTCAT...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAGGGGGACCTGTGGGTaGGTAACTGGCTCTTGCACG +
Preference number: 2 (lower is better)
Translates to: NILGIPVTRTTRCERKIGRGTCG*VTGSCT
Trigger: CGTGCAAGAGCCAGTTACCCACCCACAGGTCCCCCT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCACAAGGATTGCTATTaGCCATGGCACATTCATCCA +
Preference number: 2 (lower is better)
Translates to: WLAVALVAIDQVNAATIVHKDCY*PWHIHP
Trigger: TGGATGAATGTGCCATGGCCAATAGCAATCCTTGTG...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp ACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTCAATGTTATCAATCTGGCAAACTaGCCCAGTGAAACCAGGAGG +
Preference number: 2 (lower is better)
Translates to: TILTLTMVARIGVTVVNVINLAN*PSETRR
Trigger: CCTCCTGGTTTCACTGGGCCAGTTTGCCAGATTGAT...AACATTGACAACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGTTTCATATGCTGGGTaGGTGAGTGAAACAGGCCTA +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLVSYAG*VSETGL
Trigger: TAGGCCTGTTTCACTCACTCACCCAGCATATGAAAC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAGAGAGTGGATTCAGGTaGGGGGCAATCAGTCTGAAC +
Preference number: 2 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLESGFR*GAISLN
Trigger: GTTCAGACTGATTGCCCCTCACCTGAATCCACTCTC...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGCATGCACAGACATGTaGAGCCTCCAATCTTATCCA +
Preference number: 2 (lower is better)
Translates to: GINTILTLTMVARIGVTVACTDM*SLQSYP
Trigger: TGGATAAGATTGGAGGCTTCACATGTCTGTGCATGC...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR TCA 90 bp TGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGGCACTGGAAACGATTaGCTTTATCCACACACTGCC +
Preference number: 2 (lower is better)
Translates to: CRCRCRNQYHPDTDHGGKGTGND*LYPHTA
Trigger: GGCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCC...CTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACCAAGGAGGAGGAGATaGGTAGGTCAATTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTPRRRR*VGQFRQ
Trigger: CTGCCTGAATTGACCTACGCATCTCCTCCTCCTTGG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTCCATGTCTTCAGTaGGAACATACTGGGTATACC +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLSPCLQ*EHTGYT
Trigger: GGTATACCCAGTATGTTCTCACTGAAGACATGGACT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCCTGCAGGGCTTAAAATaGAGTCCAAGCTGCAAGAAT +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLLQGLK*SPSCKN
Trigger: ATTCTTGCAGCTTGGACTGCATTTTAAGCCCTGCAG...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGCACTGGACGGAAGTTaGAGTGTAGCCATGGACCAA +
Preference number: 2 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSALDGS*SVAMDQ
Trigger: TTGGTCCATGGCTACACTGCAACTTCCGTCCAGTGC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp ACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAGACCCAACCATCATCTATGTaGCTGGTTCCAGCCACATAC +
Preference number: 2 (lower is better)
Translates to: TVDANPACITETLISTETQPSSM*LVPATY
Trigger: GTATGTGGCTGGAACCAGGCACATAGATGATGGTTG...GGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACACATCCACATCTTCTGTaGAGTCAGCCCCTTTGTAGC +
Preference number: 2 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTHPHLL*SQPLCS
Trigger: GCTACAAAGGGGCTGACTGCACAGAAGATGTGGATG...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp ACTTCACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGCTCACAACGAGGTCCTaGATAACCCTTCAGACACTC +
Preference number: 2 (lower is better)
Translates to: TSQLMPTQPASQRHLYPLLTTRS*ITLQTL
Trigger: GAGTGTCTGAAGGGTTATGCAGGACCTCGTTGTGAG...CAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CAA 90 bp CCAAAGTTGCTTTCATGGGCCAGAATGATCAAAAGCACAAAGGTCTaGCCCTATAACATGCTGGTAGGGCTACAATCACGGAGAGGTGCA +
Preference number: 2 (lower is better)
Translates to: PKLLSWARMIKSTKV*PYNMLVGLQSRRGA
Trigger: TGCACCTCTCCGTGATTGTAGCCCTACCAGCATGTTATAGGGCAAGACCTTTGTGCTTTTGATCATTCTGGCCCATGAAAGCAACTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTTTCATGGGCCAGAATaGTCAAAAGCACAAAGGTCT +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLFHGPE*SKAQRS
Trigger: AGACCTTTGTGCTTTTGATCATTCTGGCCCATGAAA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTGTCTTCTGTGGATATaGAAGGAAAGGCTCAACAGT +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLCLLWI*KERLNS
Trigger: ACTGTTGAGCCTTTCCTTTCATATCCACAGAAGACA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp ACTTCACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAACCATTCACACCGTTaGTACATGTTGCACCCTTGC +
Preference number: 2 (lower is better)
Translates to: TSQLMPTQPASQRHLYPLNHSHR*YMLHPC
Trigger: GCAAGGGTGCAACATGTATCAACGGTGTGAATGGTT...CAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp CGGAAACCATTCACACCGTTGATACATGTTGCACCCTTGCGACAGGGATTGGAGAGCCTTGTGGGCAGGTaGAAATATATTGCCCATTTA +
Preference number: 2 (lower is better)
Translates to: RKPFTPLIHVAPLRQGLESLVGR*KYIAHL
Trigger: TAAATGGGCAATATATTTGCACCTGCCCACAAGGCT...CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp ACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAGACCCATGCTCACAAGGATTaGTATTGGCCATGGCACATT +
Preference number: 2 (lower is better)
Translates to: TVDANPACITETLISTETHAHKD*YWPWHI
Trigger: AATGTGCCATGGCCAATAGCAATCCTTGTGAGCATG...GGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp ACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTCAATGTTGTTCACACATTTTCCTaGATGCTCACAAGGATTGCT +
Preference number: 2 (lower is better)
Translates to: TILTLTMVARIGVTVVNVVHTFS*MLTRIA
Trigger: AGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAAC...AACATTGACAACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAATCTTCTCATGGATATaGCAGAAGCCTGCAGGGCTT +
Preference number: 2 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTIFSWI*QKPAGL
Trigger: AAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGAT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTGTCACTGGGTCCCTTaGGCTAAGGAAAGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSCHWVP*AKESSV
Trigger: GACTGAACTTTCCTTAGCCCAAGGGACCCAGTGACA...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGACAAATCAGGTAAGTaGGAAGCACTGATGCATACT +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLDKSGK*EALMHT
Trigger: AGTATGCATCAGTGCTTCCCACTTACCTGATTTGTC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTCTGTGAATAATAAATaGGTCCAAGGGCAGAGAGTC +
Preference number: 2 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLSVNNK*VQGQRV
Trigger: GACTCTCTGCCCTTGGACCCATTTATTATTCACAGA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGTAAGTGGGAAGCACTaGTGCATACTTGCAGCCATA +
Preference number: 2 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSVSGKH*CILAAI
Trigger: TATGGCTGCAAGTATGCATCAGTGCTTCCCACTTAC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGGCTGGATCAGTAGCTaGTACTTTCAGAAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFGWISS*YFQKWG
Trigger: GCCCCACTTCTGAAAGTATCAGCTACTGATCCAGCC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp TTCCATGGATGCAGGGATTGCTCAGGCATTCGTTCACCTGTGAGTAGCAGCTGGATTTCTAATTCACAATaGACACCTTTGAAACCTGGC +
Preference number: 2 (lower is better)
Translates to: FHGCRDCSGIRSPVSSSWISNSQ*TPLKPG
Trigger: GCCAGGTTTCAAAGGTGTGCATTGTGAATTAGAAAT...CCAGCTGCTACTCACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR GCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACACGTTCAGGCAAGGGCTaGTGTAACATTCATCAATCT +
Preference number: 2 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTRSGKG*CNIHQS
Trigger: AGATTGATGAATGTTACAGCAGCCCTTGCCTGAACG...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACTGTGGGTGGGTAACTaGCTCTTGCACGAGTTAACT +
Preference number: 2 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVLWVGN*LLHELT
Trigger: AGTTAACTCGTGCAAGAGCCAGTTACCCACCCACAG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGAAGACAACTGTCACTaGGTCCCTTGGGCTAAGGAA +
Preference number: 2 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVEDNCH*VPWAKE
Trigger: TTCCTTAGCCCAAGGGACCCAGTGACAGTTGTCTTC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp TGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATTGCTATTGGCCATaGCACATTCATCCACATCTT +
Preference number: 2 (lower is better)
Translates to: CRCRCRNQYHPDTDHGGKDCYWP*HIHPHL
Trigger: AAGATGTGGATGAATGTGCCATGGCCAATAGCAATC...CTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp CGGAAACCATTCACACCGTTGATACATGTTGCACCCTTGCGACAGGGATTGGAGTCCATACAGATTCCATaGATACAAGGGTTACTTGCA +
Preference number: 2 (lower is better)
Translates to: RKPFTPLIHVAPLRQGLESIQIP*IQGLLA
Trigger: TGCAAGTAACCCTTGTATCCATGGAATCTGTATGGA...CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CAA 90 bp TTCTGGCATGGATTCGAAAGGCATTCATTTTTGTCCACTTCACAGTaGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTG +
Preference number: 2 (lower is better)
Translates to: FWHGFERHSFLSTSQ*MPTQPASQRHLYPL
Trigger: CAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAAAAATGAATGCCTTTCGAATCCATGCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGATAAAACTTTACACTaGCCAGGCCCATACACAGAA +
Preference number: 2 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQDKTLH*PGPYTE
Trigger: TTCTGTGTATGGGCCTGGTCAGTGTAAAGTTTTATC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp GCCTTTAAAGCCCTTCTTGCAAGTACACCTGTATCCATTCACCAGATTGTCACAACCGTTGATACATGTTaGACCCTTGCGACAGGGATT +
Preference number: 2 (lower is better)
Translates to: AFKALLASTPVSIHQIVTTVDTC*TLATGI
Trigger: AATCCCTGTCGCAAGGGTGCAACATGTATCAACGGT...TGTGACAATCTGGTGAATGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACATGTAGAATCTTCTCATaGATATGGCAGAAGCCTGCA +
Preference number: 2 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTCRIFS*IWQKPA
Trigger: TGCAGGCTTCTGCCATATCCATGAGAAGATTCTACA...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATCCAATTCCTGCACTTaGACATATAAAGTCCATGTC +
Preference number: 2 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLSNSCT*TYKVHV
Trigger: GACATGGACTTTATATGTTCAAGTGCAGGAATTGGA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGTTTCTACGTTAGTTaGCAAAGGGAATGTCATGGC +
Preference number: 2 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSSFYVS*QRECHG
Trigger: GCCATGACATTCCCTTTGGCAACTAACGTAGAAACT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAGGCAGAACTTATTTTaGAGGTGTCATGGGCATCAC +
Preference number: 2 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVRQNLF*RCHGHH
Trigger: GTGATGCCCATGACACCTGCAAAATAAGTTCTGCCT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp ACTTCACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGACACATTTTCCTGCATaGTCACAAGGATTGCTATTG +
Preference number: 2 (lower is better)
Translates to: TSQLMPTQPASQRHLYPLTHFPA*SQGLLL
Trigger: CAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGT...CAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CAA 90 bp AATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTaGCACACTATGAAAGAGGCTGACAGAATGTTGCCACATGGAGAG +
Preference number: 2 (lower is better)
Translates to: NGSKGRESPFRMIKC*HTMKEADRMLPHGE
Trigger: CTCTCCATGTGGCAACATTCTGTCAGCCTCTTTCATAGTGTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCATAATCAGTAGAGACTaGTCATCTGACAAACGGAAG +
Preference number: 2 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSIISRD*SSDKRK
Trigger: CTTCCGTTTGTCAGATGATCAGTCTCTACTGATTAT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAATAATCAATAAGCCTTaGAGATACCCAGTGAAACTG +
Preference number: 2 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTIINKP*RYPVKL
Trigger: CAGTTTCACTGGGTATCTGCAAGGCTTATTGATTAT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAAGTCAATGGAATGCTTaGCAGGAAGTAGGGGGACCT +
Preference number: 2 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTSQWNA*QEVGGP
Trigger: AGGTCCCCCTACTTCCTGCCAAGCATTCCATTGACT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAAATTGCCAAGAGCATaGATACAGAGAGTGGATTCA +
Preference number: 2 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVKLPRA*IQRVDS
Trigger: TGAATCCACTCTCTGTATTCATGCTCTTGGCAATTT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCCCAAAGTTGCTTTCATaGGCCAGAATGATCAAAAGC +
Preference number: 2 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFPKLLS*ARMIKS
Trigger: GCTTTTGATCATTCTGGCCCATGAAAGCAACTTTGG...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CAA 90 bp CTTTCAAATACTAAAGTACAATGTAGGCAAATGACTGTCCACCACTaGCATCTTAGGAGGCCACAATGTTTCCTCAAAGCTCAAGATCCA +
Preference number: 2 (lower is better)
Translates to: LSNTKVQCRQMTVHH*HLRRPQCFLKAQDP
Trigger: TGGATCTTGAGCTTTGAGGAAACATTGTGGCCTCCTAAGATGCAAGTGGTGGACAGTCATTTGCCTACATTGTACTTTAGTATTTGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTAAGAAACAACATACTTaGAAGGTTTGTGCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: ENILGIPVTRTTRCERKIKKQHT*KVCAEN
Trigger: GTTCTCAGCACAAACCTTTCAAGTATGTTGTTTCTT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp CTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCTCCTCATTTTTATAAGGAGTTaGATGAATTGGCCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: LQLLVFCSQSKFLVFSLLIFIRS*MNWPGL
Trigger: CAAGCCTGGCCAATTCATTCAACTCCTTATAAAAAT...GAGGAGGCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
3UTR-3UTR CCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCCTACCTCTAGAAGCTaGCTCCAGAGATTTCTTCAT +
Preference number: 2 (lower is better)
Translates to: INGSKGRESPFRMIKCLHPTSRS*LQRFLH
Trigger: ATGAAGAAATCTCTGGAGCCAGCTTCTAGAGGTAGG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGAGGGGCAATCAGTCTaGACAATGAGCAAGTCTATA +
Preference number: 2 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVEGQSV*TMSKSI
Trigger: TATAGACTTGCTCATTGTTCAGACTGATTGCCCCTC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR TCA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCATTTTTATAAGGAGTTaGATGAATTGGCCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSIFIRS*MNWPGL
Trigger: CAAGCCTGGCCAATTCATTCAACTCCTTATAAAAAT...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
3UTR-3UTR GCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGGCTTGTATTCATCTTaGATTTCCACAAACTTGTCT +
Preference number: 2 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFGLYSS*ISTNLS
Trigger: AGACAAGTTTGTGGAAATGCAAGATGAATACAAGCC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCACAATCACGGAGAGGTaGAAAACCAAAAGCACCAAA +
Preference number: 2 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSTITER*KTKSTK
Trigger: TTTGGTGCTTTTGGTTTTGCACCTCTCCGTGATTGT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGAAACAGGCCTAGAATaGTCAGATCTGGGACAAATG +
Preference number: 2 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVETGLE*SDLGQM
Trigger: CATTTGTCCCAGATCTGAGCATTCTAGGCCTGTTTC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR GCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACGCTTTGAAAATAAACTaGCTCGGTTTCAGGACCCAG +
Preference number: 2 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYALKIN*LGFRTQ
Trigger: CTGGGTCCTGAAACCGAGGCAGTTTATTTTCAAAGC...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR-3UTR TCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACTCATGTGGGAAGACTTaGAAAATAATACCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYSCGKT*KIIPGP
Trigger: GGGACCAGGTATTATTTTTCAAGTCTTCCCACATGA...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGAGGCTGACAGAATGTTaGCACATGGAGAGAATAAAG +
Preference number: 2 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVRLTEC*HMERIK
Trigger: CTTTATTCTCTCCATGTGGCAACATTCTGTCAGCCT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACTTATAGGGCTGTTTTaGATCATAGAAAACAAGTCC +
Preference number: 2 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTLIGLF*IIENKS
Trigger: GGACTTGTTTTCTATGATCCAAAACAGCCCTATAAG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CAA 90 bp GTACATAAATGTGTCCTCCCAAATAGTCATCATACATTCAATGTATaGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTA +
Preference number: 2 (lower is better)
Translates to: VHKCVLPNSHHTFNV*VRAKIPKPPLNKTL
Trigger: TAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGTATGATGACTATTTGGGAGGACACATTTATGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp CTGACGTGCCTGGCTGGCAGTTGCACTGGTAGCCATTaGCCAGGTCAATGCAGCGACCATCGTTCAGGCAAG +
Preference number: 3 (lower is better)
Translates to: LTCLAGSCTGSH*PGQCSDHRSGK
Trigger: CTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCAGGCACGTCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 72 bp ACAGCCCCACAGACCTGGGCACTGAGACTCAGGCACTaGCAAAGCAAGGTCAAGTATCCCCTCTGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: TAPQTWALRLRH*QSKVKYPLWSL
Trigger: CAGGGACCAGAGGGGATACTTGACCTTGCTTTGTCAGTGCCTGAGTCTCAGTGCCCAGGTCTGTGGGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 72 bp ATCCAGTCAGTAAAGGCAGGAAGGACAACTGAGGAGTaGGCCCTCGGAGGAGCATTACAGCCCCACAGACCT +
Preference number: 3 (lower is better)
Translates to: IQSVKAGRTTEE*ALGGALQPHRP
Trigger: AGGTCTGTGGGGCTGTAATGCTCCTCCGAGGGCTCACTCCTCAGTTGTCCTTCCTGCCTTTACTGACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 72 bp GCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAACTaGGGAGTGAGCCCTCGGAGGAGCATTACAGCCCCA +
Preference number: 3 (lower is better)
Translates to: AQDPVSKGRKDN*GVSPRRSITAP
Trigger: TGGGGCTGTAATGCTCCTCCGAGGGCTCACTCCTCAGTTGTCCTTCCTGCCTTTACTGACTGGATCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 72 bp GGCAAGGGCTGCTGTAACATTCATCAATCTGGTCACTaGAGATGGCGCCCATGTACCCGGGATTGCAGATGC +
Preference number: 3 (lower is better)
Translates to: GKGCCNIHQSGH*RWRPCTRDCRC
Trigger: GCATCTGCAATCCCGGGTACATGGGCGCCATCTGCAGTGACCAGATTGATGAATGTTACAGCAGCCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 72 bp CCTCGGGGCATATACAGCGGAAACCATTCACACCGTTaGTACATGTTGCACCCTTGCGACAGGGATTGGAGG +
Preference number: 3 (lower is better)
Translates to: PRGIYSGNHSHR*YMLHPCDRDWR
Trigger: CCTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCGCTGTATATGCCCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 72 bp ATGGCACTCATTGATGTCCATCTCACAACGAGGTCCTaGATAACCCTTCAGACACTCACAGTGGAAGGCGCC +
Preference number: 3 (lower is better)
Translates to: MALIDVHLTTRS*ITLQTLTVEGA
Trigger: GGCGCCTTCCACTGTGAGTGTCTGAAGGGTTATGCAGGACCTCGTTGTGAGATGGACATCAATGAGTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 72 bp CCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTaGTGTAACATTCATCAATCTGGTCACTGCAGATGG +
Preference number: 3 (lower is better)
Translates to: PGQCSDHRSGKG*CNIHQSGHCRW
Trigger: CCATCTGCAGTGACCAGATTGATGAATGTTACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATTAAGGTGCAGCCTCTaGAAGGGATCTCCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLLRCSL*KGSPAP
Trigger: GGGGGCAGGAGATCCCTTCAAGAGGCTGCACCTTAA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAGACCTCCACACACTGCCCATaGTTCACACAAGGGTTGCTC +
Preference number: 3 (lower is better)
Translates to: TVDANPACITETLISTETSTHCP*FTQGLL
Trigger: GAGCAACCCTTGTGTGAACAATGGGCAGTGTGTGGA...GGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 72 bp ACAGTGGAAGGCGCCATCCGTGTTCACACATTTTCCTaGATGCTCACAAGGATTGCTATTGGCCATGGCACA +
Preference number: 3 (lower is better)
Translates to: TVEGAIRVHTFS*MLTRIAIGHGT
Trigger: TGTGCCATGGCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCCTTCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CCA 72 bp AGATCTGGGACAAATGTGTTCCATACAGGCAGTCAATaGAATGCTTGGCAGGAAGTAGGGGGACCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: RSGTNVFHTGSQ*NAWQEVGGPVG
Trigger: ACCCACAGGTCCCCCTACTTCCTGCCAAGCATTCCATTGACTGCCTGTATGGAACACATTTGTCCCAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTCAATGTTTCACAATGCACACCTTaGAAACCTGGCATGCACAGA +
Preference number: 3 (lower is better)
Translates to: TILTLTMVARIGVTVVNVSQCTP*KPGMHR
Trigger: TCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTGA...AACATTGACAACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 72 bp GGAGGATATAAAATATCCAGTGGCTGGATCAGTAGCTaGTACTTTCAGAAGTGGGGCTGGAGCAGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: GGYKISSGWISS*YFQKWGWSRRA
Trigger: TGCCCTCCTGCTCCAGCCCCACTTCTGAAAGTATCAGCTACTGATCCAGCCACTGGATATTTTATATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 72 bp TGGAAGGCGCCATCCGTGTTCACACATTTTCCTGCATaGTCACAAGGATTGCTATTGGCCATGGCACATTCA +
Preference number: 3 (lower is better)
Translates to: WKAPSVFTHFPA*SQGLLLAMAHS
Trigger: TGAATGTGCCATGGCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CCA 72 bp TTCCATATGGGGCCACCGACAGACAAATCAGGTAAGTaGGAAGCACTGATGCATACTTGCAGCCATAGAAGG +
Preference number: 3 (lower is better)
Translates to: FHMGPPTDKSGK*EALMHTCSHRR
Trigger: CCTTCTATGGCTGCAAGTATGCATCAGTGCTTCCCACTTACCTGATTTGTCTGTCGGTGGCCCCATATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp GGCCACCGACAGACAAATCAGGTAAGTGGGAAGCACTaGTGCATACTTGCAGCCATAGAAGGAATGAGAACT +
Preference number: 3 (lower is better)
Translates to: GHRQTNQVSGKH*CILAAIEGMRT
Trigger: AGTTCTCATTCCTTCTATGGCTGCAAGTATGCATCAGTGCTTCCCACTTACCTGATTTGTCTGTCGGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp ACTACTTCGCATTTCCATTGGAAGGCACCTTGTCCCTaGGCAACCATCTGTTTGTCACCAGCTATGGCTAGT +
Preference number: 3 (lower is better)
Translates to: TTSHFHWKAPCP*ATICLSPAMAS
Trigger: ACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAATGCGAAGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 72 bp AAACTATTATGCCAACAGACACGCAGGGTTTCCATATaGGGCCACCGACAGACAAATCAGGTAAGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: KLLCQQTRRVSI*GHRQTNQVSGK
Trigger: CTTCCCACTTACCTGATTTGTCTGTCGGTGGCCCCATATGGAAACCCTGCGTGTCTGTTGGCATAATAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 72 bp AAGCCTCCAATCTTATCCAGACAGGTAGCATCATTCTaGCAGGGGTCTGAATGGCACTCATTGATGTCCATC +
Preference number: 3 (lower is better)
Translates to: KPPILSRQVASF*QGSEWHSLMSI
Trigger: GATGGACATCAATGAGTGCCATTCAGACCCCTGCCAGAATGATGCTACCTGTCTGGATAAGATTGGAGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CCA 72 bp CACTTATATCCACTGAGACCTCCAGTACAGTTTCCATaGATGCAGGGATTGCTCAGGCATTCGTTCACCTGT +
Preference number: 3 (lower is better)
Translates to: HLYPLRPPVQFP*MQGLLRHSFTC
Trigger: ACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAAACTGTACTGGAGGTCTCAGTGGATATAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTACCGGATGACCTTCATTaGTTCCTCAGCAGCATTTAC +
Preference number: 3 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLPDDLH*FLSSIY
Trigger: GTAAATGCTGCTGAGGAACAAATGAAGGTCATCCGG...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ACTTCACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAAACCATTCACACCGTaGATACATGTTGCACCCTTG +
Preference number: 3 (lower is better)
Translates to: TSQLMPTQPASQRHLYPLKPFTP*IHVAPL
Trigger: CAAGGGTGCAACATGTATCAACGGTGTGAATGGTTT...CAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR GCA 72 bp ATTTTTGTCCACTTCACAGTTGATGCCAACCCAGCCTaGATCACAGAGACACTTATATCCACTGAGACCTCC +
Preference number: 3 (lower is better)
Translates to: IFVHFTVDANPA*ITETLISTETS
Trigger: GGAGGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCACATGGACCCAAGGCTaGTATTCATCTTGCATTTCC +
Preference number: 3 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSTWTQG*YSSCIS
Trigger: GGAAATGCAAGATGAATACAAGCCTTGGGTCCATGT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCTTGCACGAGTTAACTaGTCTCTTGGTCATTCCAAC +
Preference number: 3 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSLARVN*SLGHSN
Trigger: GTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCAGTCAATGGAATGCTaGGCAGGAAGTAGGGGGACC +
Preference number: 3 (lower is better)
Translates to: INGSKGRESPFRMIKCLHQSMEC*AGSRGT
Trigger: GGTCCCCCTACTTCCTGCCAAGCATTCCATTGACTG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGAGGATGCAATGGATTaGAGCATCACAGCCAATTGC +
Preference number: 3 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVEDAMD*SITANC
Trigger: GCAATTGGCTGTGATGCTCAAATCCATTGCATCCTC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp GCCTTTAAAGCCCTTCTTGCAAGTACACCTGTATCCATTCACCAGATTGTCACATCACAAGGATTGCTATaGGCCATGGCACATTCATCC +
Preference number: 3 (lower is better)
Translates to: AFKALLASTPVSIHQIVTSQGLL*AMAHSS
Trigger: GGATGAATGTGCCATGGCCAATAGCAATCCTTGTGA...TGTGACAATCTGGTGAATGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR TCA 72 bp GGGAAAGGAGACCAAAGTTGCTTTCATGGGCCAGAATaGTCAAAAGCACAAAGGTCTTGCCCTATAACATGC +
Preference number: 3 (lower is better)
Translates to: GKGDQSCFHGPE*SKAQRSCPITC
Trigger: GCATGTTATAGGGCAAGACCTTTGTGCTTTTGATCATTCTGGCCCATGAAAGCAACTTTGGTCTCCTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp AAGGCTCAACAGTTAAGACTAGTTTCATATGCTGGGTaGGTGAGTGAAACAGGCCTAGAATGCTCAGATCTG +
Preference number: 3 (lower is better)
Translates to: KAQQLRLVSYAG*VSETGLECSDL
Trigger: CAGATCTGAGCATTCTAGGCCTGTTTCACTCACTCACCCAGCATATGAAACTAGTCTTAACTGTTGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp GATTCGAAAGGCATTCATTTTTGTCCACTTCACAGTTaGTGCCAACCCAGCCTGCATCACAGAGACACTTAT +
Preference number: 3 (lower is better)
Translates to: DSKGIHFCPLHS*CQPSLHHRDTY
Trigger: ATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAAAAATGAATGCCTTTCGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAAAAGCACAAAGGTCTaGCCCTATAACATGCTGGTA +
Preference number: 3 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVKSTKV*PYNMLV
Trigger: TACCAGCATGTTATAGGGCAAGACCTTTGTGCTTTT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACGTGGGTAACTGGCTCTaGCACGAGTTAACTTGTCTC +
Preference number: 3 (lower is better)
Translates to: INGSKGRESPFRMIKCLHVGNWL*HELTCL
Trigger: GAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCAC...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp ACAGTTAAGACTAGTTTCATATGCTGGGTGAGTGAGTaGAACAGGCCTAGAATGCTCAGATCTGGGACAAAT +
Preference number: 3 (lower is better)
Translates to: TVKTSFICWVSE*NRPRMLRSGTN
Trigger: ATTTGTCCCAGATCTGAGCATTCTAGGCCTGTTTCACTCACTCACCCAGCATATGAAACTAGTCTTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 72 bp GAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTaGGTACATAAATGTGTCCTCCCAAATAGTCATCAT +
Preference number: 3 (lower is better)
Translates to: EVTIVPLISGGL*VHKCVLPNSHH
Trigger: ATGATGACTATTTGGGAGGACACATTTATGTACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAGGCTTGTATTCATCTaGCATTTCCACAAACTTGTC +
Preference number: 3 (lower is better)
Translates to: NILGIPVTRTTRCERKIGRLVFI*HFHKLV
Trigger: GACAAGTTTGTGGAAATGCAAGATGAATACAAGCCT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGAAAGGAGACCAAAGTaGCTTTCATGGGCCAGAATG +
Preference number: 3 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTERRPK*LSWARM
Trigger: CATTCTGGCCCATGAAAGCAACTTTGGTCTCCTTTC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGAGTTAACTTGTCTCTaGGTCATTCCAACATTCCAA +
Preference number: 3 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVELTCL*VIPTFQ
Trigger: TTGGAATGTTGGAATGACCAAGAGACAAGTTAACTC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp ATACAGAGAGTGGATTCAGGTGAGGGGCAATCAGTCTaGACAATGAGCAAGTCTATAGTTGTCCATTATCAT +
Preference number: 3 (lower is better)
Translates to: IQRVDSGEGQSV*TMSKSIVVHYH
Trigger: ATGATAATGGACAACTATAGACTTGCTCATTGTTCAGACTGATTGCCCCTCACCTGAATCCACTCTCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp AAAGAAAATTTGCTCTCTCAGCAAATTATGACATCATaGGGTAACACTGCCAGGCCATGGATGCAGTATTGG +
Preference number: 3 (lower is better)
Translates to: KENLLSQQIMTS*GNTARPWMQYW
Trigger: CCAATACTGCATCCATGGCCTGGCAGTGTTACCTCATGATGTCATAATTTGCTGAGAGAGCAAATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp CAGAAAGAAAAGAAAATTTGCTCTCTCAGCAAATTATaGCATCATGAGGTAACACTGCCAGGCCATGGATGC +
Preference number: 3 (lower is better)
Translates to: QKEKKICSLSKL*HHEVTLPGHGC
Trigger: GCATCCATGGCCTGGCAGTGTTACCTCATGATGTCATAATTTGCTGAGAGAGCAAATTTTCTTTTCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 72 bp CACACCCTTCTTCCTGGTAAAGTTTATATGAAGACCTaGACACAGACAAGAAAAATTAAGGTGCAGCCTCTT +
Preference number: 3 (lower is better)
Translates to: HTLLPGKVYMKT*TQTRKIKVQPL
Trigger: AAGAGGCTGCACCTTAATTTTTCTTGTCTGTGTGCAGGTCTTCATATAAACTTTACCAGGAAGAAGGGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 72 bp AGGACCCAGCCTAACCACATATTAGCTGTACAACTTTaGGTGAATCACTTAACATCTCCAAACTTCAGTTAC +
Preference number: 3 (lower is better)
Translates to: RTQPNHILAVQL*VNHLTSPNFSY
Trigger: GTAACTGAAGTTTGGAGATGTTAAGTGATTCACCCAAAGTTGTACAGCTAATATGTGGTTAGGCTGGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCAGGCAGAACTTATTTaGCAGGTGTCATGGGCATCA +
Preference number: 3 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVQAELI*QVSWAS
Trigger: TGATGCCCATGACACCTGCAAAATAAGTTCTGCCTG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACAATTTGGTCTGACATaGTGCTTAAGGAAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTQFGLT*CLRKRE
Trigger: CTCCCTTTTCCTTAAGCACAATGTCAGACCAAATTG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR-3UTR CAA 90 bp TCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCTCATTTTTATAAGGAGTaGAATGAATTGGCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: SAPAACILFPIKILGFQPHFYKE*NELARL
Trigger: AAGCCTGGCCAATTCATTCAACTCCTTATAAAAATG...AGGCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
3UTR-3UTR CAA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCATTTTTATAAGGAGTaGAATGAATTGGCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSHFYKE*NELARL
Trigger: AAGCCTGGCCAATTCATTCAACTCCTTATAAAAATG...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
3UTR GCA 72 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTaGGGGCCTAGTATATACTGGGCACTGTTTGTAGGT +
Preference number: 3 (lower is better)
Translates to: ILNHTVSQPIYI*GPSIYWALFVG
Trigger: ACCTACAAACAGTGCCCAGTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR-3UTR CAA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACCACAAAGCAAAGGCTTaGAAAATAAACTGCCTCGGT +
Preference number: 3 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYHKAKA*KINCLG
Trigger: ACCGAGGCAGTTTATTTTCAAAGCCTTTGCTTTGTG...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR TCA 72 bp AACAAACTCACACCCTTCTTCCTGGTAAAGTTTATATaGAGACCTGCACACAGACAAGAAAAATTAAGGTGC +
Preference number: 3 (lower is better)
Translates to: NKLTPFFLVKFI*RPAHRQEKLRC
Trigger: GCACCTTAATTTTTCTTGTCTGTGTGCAGGTCTTCATATAAACTTTACCAGGAAGAAGGGTGTGAGTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp AATTTCTTTCAAATACTAAAGTACAATGTAGGCAAATaGCTGTCCACCACTTGCATCTTAGGAGGCCACAAT +
Preference number: 3 (lower is better)
Translates to: NFFQILKYNVGK*LSTTCILGGHN
Trigger: ATTGTGGCCTCCTAAGATGCAAGTGGTGGACAGTCATTTGCCTACATTGTACTTTAGTATTTGAAAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGAAGGAAAATGTTCTGTaGAGTTTCTACGTTAGTTGC +
Preference number: 3 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVKENVL*SFYVSC
Trigger: GCAACTAACGTAGAAACTCAACAGAACATTTTCCTT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR TCA 72 bp AAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTaGTTATCCATCTTACCTTCCCTTTTATTAGATACC +
Preference number: 3 (lower is better)
Translates to: KLSLQFRTQMRK*LSILPSLLLDT
Trigger: GGTATCTAATAAAAGGGAAGGTAAGATGGATAATCACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR GCA 72 bp ATTAATATTATGACTTATATCCCAGTTCCCAATTCTTaGTATAGCAACTACTTCGCATTTCCATTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: INIMTYIPVPNS*YSNYFAFPLEG
Trigger: GCCTTCCAATGGAAATGCGAAGTAGTTGCTATAGCAAGAATTGGGAACTGGGATATAAGTCATAATATTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CCA 72 bp AATCACTTAACATCTCCAAACTTCAGTTACTTCATGTaGGAAGACTTGAAAAATAATACCTGGTCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: NHLTSPNFSYFM*EDLKNNTWSQD
Trigger: ATCTTGGGACCAGGTATTATTTTTCAAGTCTTCCCACATGAAGTAACTGAAGTTTGGAGATGTTAAGTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAGCTGGGAGAATGGTCTaGGCTACCTGCCCGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAAGRMV*ATCPSC
Trigger: GCAGGACGGGCAGGTAGCTCAGACCATTCTCCCAGC...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAATCCCAGCAGGGAAGTaGGGAGGAGCAGTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAIPAGK*GGAVGP
Trigger: TGGGCCAACTGCTCCTCCCCACTTCCCTGCTGGGAT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAAATAGGGGTACACCATaGGTTCCCCCTGGGAGTCCC +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHANRGTP*VPPGSP
Trigger: GGGACTCCCAGGGGGAACTCATGGTGTACCCCTATT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAGCATTCGTTCACCTGTaGGTAGCAGCTGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAAFVHL*VAAGVM
Trigger: CATCACCCCAGCTGCTACTCACAGGTGAACGAATGC...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCATGGAGAGGCACTCGTTaGTGTCTCCCTCACAACGCT +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAWRGTR*CLPHNA
Trigger: AGCGTTGTGAGGGAGACATCAACGAGTGCCTCTCCA...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAAGCACTGCCACTGCCTaGAGACACAATGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHASTATA*RHNVVV
Trigger: CACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAGGCAGTTGTAAGTGTTaGCCCCATCCACACAAACCC +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAGSCKC*PHPHKP
Trigger: GGGTTTGTGTGGATGGGGTCAACACTTACAACTGCC...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACGCAGTCCCGGGGACTaGGGCAGAAGCAGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTRSPGD*GRSSGV
Trigger: GACCCCGCTGCTTCTGCCCCAGTCCCCGGGACTGCG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AGCCTCCATTGCGGTTGGCACAGGTGCCCCCATTTTGACAGGCATTGGGCTGCATTCACAATTAACCCCTaGCGTGCCTGGCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLHCGWHRCPHFDRHWAAFTINP*RAWLAV
Trigger: AACTGCCAGCCAGGCACGTCAGGGGTTAATTGTGAA...TGCAGCCCAATGCCTGTCAAAATGGGGGCACCTGTGCCAACCGCAATGGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAATCCTATCCATGCACTaGCCACCATTAAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAILSMH*PPLRQW
Trigger: CCATTGCCTTAATGGTGGTCAGTGCATGGATAGGAT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAGATGCCAACCCAGCCTaGATCACAGAGACACTTATA +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHADANPA*ITETLI
Trigger: TATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATC...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGCTGAGGGTGGCAGCTaGCCCCGTGCTGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGAEGGS*PRAGRG
Trigger: GCCCCTGCCAGCACGGGGGCAGCTGCCACCCTCAGC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAATGGCCGTCGATCAATaGGGTCATCTTCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAMAVDQ*GHLLLR
Trigger: TCTCAGAAGAAGATGACCCCATTGATCGACGGCCAT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAAGGGGATGTAATCATTaGAGAGGATGTGGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHARGCNH*RGCGVG
Trigger: TCCGACACCACATCCTCTCCAATGATTACATCCCCT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAGGGGCCCGCAACAGCTaGAGGGCAGGTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLGARNS*RAGGLR
Trigger: CCTCAGTCCACCTGCCCTCCAGCTGTTGCGGGCCCC...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGGCAAACTGGCCCAGTaGAACCAGGAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVGKLAQ*NQEDTG
Trigger: GCCTGTGTCCTCCTGGTTTCACTGGGCCAGTTTGCC...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCCCTGTGAATCCTGGTaGGCAGACACAACTGTAGCG +
Preference number: 4 (lower is better)
Translates to: WLAVALVAIDQVNAATIVPCESW*ADTTVA
Trigger: CGCTACAGTTGTGTCTGCTCACCAGGATTCACAGGG...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGACCTCCTGCTCTGCCTaGGGAGGGGTGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQTSCSA*GGVRAS
Trigger: GCTGGCTCTCACCCCTCCTCAGGCAGAGCAGGAGGT...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CACTCACAGTGGAAGGCGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAAAGCCATAGCCTCCATTaGGGTTGGCACAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HSQWKAPSVFTHFPACSQSHSLH*GWHRCP
Trigger: GGGGCACCTGTGCCAACCGCAATGGAGGCTATGGCT...TTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCCTTCCACTGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAGAAACAGGCCTAGAATaGTCAGATCTGGGACAAATG +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAETGLE*SDLGQM
Trigger: CATTTGTCCCAGATCTGAGCATTCTAGGCCTGTTTC...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CGGAAACCATTCACACCGTTGATACATGTTGCACCCTTGCGACAGGGATTGGAGATCCCCTCTGGTCCCTaGTGGTACCTCCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: RKPFTPLIHVAPLRQGLEIPSGP*WYLQDP
Trigger: TGGGTCCTGGAGGTACCAGCAGGGACCAGAGGGGAT...CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTAAGCCTCCATTGCGGTTaGCACAGGTGCCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: VAIDQVNAATIVQARAAVSLHCG*HRCPHF
Trigger: AAAATGGGGGCACCTGTGCCAACCGCAATGGAGGCT...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TTCCATGGATGCAGGGATTGCTCAGGCATTCGTTCACCTGTGAGTAGCAGCTGGTCTGGTCACTGCAGATaGCGCCCATGTACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: FHGCRDCSGIRSPVSSSWSGHCR*RPCTRD
Trigger: ATCCCGGGTACATGGGCGCCATCTGCAGTGACCAGA...CCAGCTGCTACTCACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCCAGTCCGGTCTGTCTaGGCCTGGAGGCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSPVRSV*AWRLAP
Trigger: GGGTGCCAGCCTCCAGGCCCAGACAGACCGGACTGG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCATTGCGAATCAGAATCTaGAAGACACCTTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHALRIRI*KTPWAS
Trigger: TGATGCCCAAGGTGTCTTCCAGATTCTGATTCGCAA...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTAGTCAAGTATCCCCTCTaGTCCCTGCTGGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: VAIDQVNAATIVQARAAVVKYPL*SLLVPP
Trigger: TGGAGGTACCAGCAGGGACCAGAGGGGATACTTGAC...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp TTCCATGGATGCAGGGATTGCTCAGGCATTCGTTCACCTGTGAGTAGCAGCTGGCAAACCCCTCCATTCTaGCACCTGTGGTTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FHGCRDCSGIRSPVSSSWQTPPF*HLWLGQ
Trigger: CTGCCCTAACCACAGGTGTCAGAATGGAGGGGTTTG...CCAGCTGCTACTCACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGGCTCACGACGCTTGTaGTTGCTTGCATCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLGSRRL*LLASRR
Trigger: TCGCCGAGATGCAAGCAATCACAAGCGTCGTGAGCC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAGGCAGGAAGGACAACTaGGGAGTGAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTGRKDN*GVSPRR
Trigger: CCTCCGAGGGCTCACTCCTCAGTTGTCCTTCCTGCC...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTATACATGTTGCACCCTTaGGACAGGGATTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VAIDQVNAATIVQARAAVYMLHP*DRDWRH
Trigger: GTGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTA...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAGCCCAGGGGGCAGCTaGAGCGGTAGGTACCCAGGC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSPGGS*SGRYPG
Trigger: GCCTGGGTACCTACCGCTGCAGCTGCCCCCTGGGCT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGCTACCTGCCCGTCCTaGTGGGGCATCATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQATCPS*WGIMAV
Trigger: CACTGCCATGATGCCCCAGCAGGACGGGCAGGTAGC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTCTGGTCACTGCAGATaGCGCCCATGTACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLSGHCR*RPCTRD
Trigger: ATCCCGGGTACATGGGCGCCATCTGCAGTGACCAGA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGCTACCCGAGAATGGTaGGGCACACTGGCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLATREW*GTLAGV
Trigger: TACTCCTGCCAGTGTGCCCCACCATTCTCGGGTAGC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAGCTGCCACTGCAGCATaGAGTGGACAGCGGCCCATG +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLAATAA*SGQRPM
Trigger: CATGGGCCGCTGTCCACTCCATGCTGCAGTGGCAGC...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCATCTCGATTGGCAAAATaGTCTAACAGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHASRLAK*SNRILA
Trigger: AGCCAAGATCCTGTTAGACCATTTTGCCAATCGAGA...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTATCAAGCTGTCCATTGTaGGGGACAGCGGCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: VAIDQVNAATIVQARAAVSSCPL*GTAAVV
Trigger: TACAACTGCCGCTGTCCCCCACAATGGACAGCTTGA...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
3UTR CAA 72 bp CCCTCGGGGCATATACAGCGGAAACCATTCACACCGTaGATACATGTTGCACCCTTGCGACAGGGATTGGAG +
Preference number: 4 (lower is better)
Translates to: PSGHIQRKPFTP*IHVAPLRQGLE
Trigger: CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCGCTGTATATGCCCCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GGCGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAAGGATTGCTATTGGCCTCCACTCCAGCCGTTaGCACATACACAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GAIRVHTFSCMLTRIAIGLHSSR*HIHSHS
Trigger: GCTATGGCTGTGTATGTGTCAACGGCTGGAGTGGAG...GCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp CGGAAACCATTCACACCGTTGATACATGTTGCACCCTTGCGACAGGGATTGGAGCACACAACACACCAGTaGAACCTGTGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: RKPFTPLIHVAPLRQGLEHTTHQ*NLWHTG
Trigger: GCCAGTGTGCCACAGGTTTCACTGGTGTGTTGTGTG...CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCCCCTGTGAATCCTGGTaGGCAGACACAACTGTAGCG +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLPCESW*ADTTVA
Trigger: CGCTACAGTTGTGTCTGCTCACCAGGATTCACAGGG...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGCTGGTGGTCACATCTaGCCAGTCAGAAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLAGGHI*PVRSRV
Trigger: CACTCTGCTTCTGACTGGTCAGATGTGACCACCAGC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCATCCAATTCCTGCACTTaGACATATAAAGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHASNSCT*TYKVHV
Trigger: GACATGGACTTTATATGTTCAAGTGCAGGAATTGGA...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCATCTCTCAGCAAATTATaGCATCATGAGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHASLSKL*HHEVTL
Trigger: CAGTGTTACCTCATGATGTCATAATTTGCTGAGAGA...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAAGGCCACACGGTCGATaGAGGTGGAGCCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTRPHGR*RWSLEY
Trigger: GTACTCCAGGCTCCACCTGCATCGACCGTGTGGCCT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCATGACACAGGAGACCTaGCTTCCCCTCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLMTQET*LPLWAH
Trigger: ATGTGCCCAGAGGGGAAGGCAGGTCTCCTGTGTCAT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCCACACTCCTCACTGTTaGACCCCTGGTCACAGTGGT +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLHTPHC*TPGHSG
Trigger: ACCACTGTGACCAGGGGTGCAACAGTGAGGAGTGTG...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCCGCACAATGTCATGGTaGATGCGATCCCGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLRTMSW*MRSRAT
Trigger: TGTGGCTCGGGATCGCATGCACCATGACATTGTGCG...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACATGCTCTGGGGAGCTATaGCAGGATGGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTCSGEL*QDGCPQ
Trigger: CTGAGGGCACCCATCCTGGCATAGCTCCCCAGAGCA...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCCAGTACAGTTTCCATaGATGCAGGGATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WLAVALVAIDQVNAATIVPVQFP*MQGLLR
Trigger: CCTGAGCAATCCCTGCATCCATGGAAACTGTACTGG...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACATCTGGGCCTGGAGGCTaGCACCCTGGTAGACCAAGT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTSGPGG*HPGRPS
Trigger: ACTTGGTCTACCAGGGTGCCAGCCTCCAGGCCCAGA...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTACTGAATGGCACTCATTaGTGTCCATCTCACAACGAG +
Preference number: 4 (lower is better)
Translates to: VAIDQVNAATIVQARAAVLNGTH*CPSHNE
Trigger: CTCGTTGTGAGATGGACATCAATGAGTGCCATTCAG...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGGCAGAAGGATCCAGTaGAACCCACAGGGCACAAGC +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTGRRIQ*NPQGTS
Trigger: GCTTGTGCCCTGTGGGTTTCACTGGATCCTTCTGCC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGTCCCCTGTATGGCGTaGGAGGCCAGGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIVPCMA*EARRAA
Trigger: AGCAGCTCTCCTGGCCTCTCACGCCATACAGGGGAC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAGGGTGTGCTTCAGGCTaGGGAAAGATCTGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLGCASG*GKICWA
Trigger: GGCCCAACAGATCTTTCCTCAGCCTGAAGCACACCC...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGCAAGAGGACAACTGAGGAGTaGGCCCTCGGAGGAGCATTA +
Preference number: 4 (lower is better)
Translates to: CRCRCRNQYHPDTDHGGKRTTEE*ALGGAL
Trigger: TAATGCTCCTCCGAGGGCTCACTCCTCAGTTGTCCT...CTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp TGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGCAAGATGACACAGGAGACCTaGCTTCCCCTCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: CRCRCRNQYHPDTDHGGKMTQET*LPLWAH
Trigger: ATGTGCCCAGAGGGGAAGGCAGGTCTCCTGTGTCAT...CTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp TTCCATGGATGCAGGGATTGCTCAGGCATTCGTTCACCTGTGAGTAGCAGCTGGCCATGTACCCGGGATTaGAGATGCAGGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: FHGCRDCSGIRSPVSSSWPCTRD*RCRCRN
Trigger: ATTCCTACACCTGCATCTGCAATCCCGGGTACATGG...CCAGCTGCTACTCACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGAGCAGGGTACCCAGTaGCCGCAAGAAGCTGCGAGC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVEQGTQ*PQEAAS
Trigger: GCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTTCAGACACTCACAGTaGAAGGCGCCATCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLFRHSQ*KAPSVF
Trigger: GAACACGGATGGCGCCTTCCACTGTGAGTGTCTGAA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCCATCAGGCATGTTACTaGCCACAGCACAAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLHQACY*PQHKSL
Trigger: GAGGGACTTGTGCTGTGGCCAGTAACATGCCTGATG...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGCGGCTACCCGAGAATaGTGGGGCACACTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVAATRE*WGTLAG
Trigger: TCCTGCCAGTGTGCCCCACCATTCTCGGGTAGCCGC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCCCACTGGCAGGCATaGCTGTTGCAGGCCTCATCA +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSHWQA*LLQASS
Trigger: TGATGAGGCCTGCAACAGCCATGCCTGCCAGTGGGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGTGGGGAGGAGCAGTTaGCCCAGGGGTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGVGRSS*PRGSPW
Trigger: CCATGGAGAACCCCTGGGCCAACTGCTCCTCCCCAC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGAGGCGCACAATGTCATaGTGCATGCGATCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQRRTMS*CMRSRA
Trigger: GGCTCGGGATCGCATGCACCATGACATTGTGCGCCT...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAAAGATAGTGCATGCTaGGCATGGACTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLKDSAC*AWTGAG
Trigger: TCCTGCCCCAGTCCATGCCCAGCATGCACTATCTTT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGAGGGCTCCCGAGGGGTaGTTATGTGCTTCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQRAPEG*LCASLQ
Trigger: CTGAAGGGAAGCACATAACCACCCCTCGGGAGCCCT...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACTGGGGAGCCCCCGCTaGTTGGGCAATACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKLGSPR*LGNTAF
Trigger: AAAGGCAGTATTGCCCAACCAGCGGGGGCTCCCCAG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGGGGCAGGTACGCTGTaGTCCACAGAGGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSGAGTL*STEVHA
Trigger: TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACCCTCTGGTCCCTGCTaGTACCTCCAGGACCCACCT +
Preference number: 4 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPPSGPC*YLQDPP
Trigger: AGGTGGGTCCTGGAGGTACCAGCAGGGACCAGAGGG...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTCACAATGCACACCTTTaGAACCTGGCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVHNAHL*NLACTD
Trigger: GTCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTG...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp ACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTCAATGTTGGCACTGGAAACGATTaGCTTTATCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: TILTLTMVARIGVTVVNVGTGND*LYPHTA
Trigger: GGCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCC...AACATTGACAACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAGCATTCGTTCACCTGTaGGTAGCAGCTGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTAFVHL*VAAGVM
Trigger: CATCACCCCAGCTGCTACTCACAGGTGAACGAATGC...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGCGTGTTGCCAGCATTaGTGCAGACACCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTACCQH*CRHLSA
Trigger: AGCACTCAGGTGTCTGCATCAATGCTGGCAACACGC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACCATTCTGGCAGGGCTaGTTCTGGCACTCATCCACT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTPFWQG*FWHSST
Trigger: AGTGGATGAGTGCCAGAATCAGCCCTGCCAGAATGG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAAGGCACCTTGTCCCTaGGCAACCATCTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLKAPCP*ATICLS
Trigger: TGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAGCCATAGCCTCCATTaGGGTTGGCACAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSHSLH*GWHRCP
Trigger: GGGGCACCTGTGCCAACCGCAATGGAGGCTATGGCT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTCTCACAACGAGGTCCTaGATAACCCTTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVLTTRS*ITLQTL
Trigger: GAGTGTCTGAAGGGTTATGCAGGACCTCGTTGTGAG...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp GTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTCAGGCAAGGGCTGCTGTACGTTCAGGCAAGGGCTaGTGTAACATTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: VAIDQVNAATIVQARAAVRSGKG*CNIHQS
Trigger: AGATTGATGAATGTTACAGCAGCCCTTGCCTGAACG...TACAGCAGCCCTTGCCTGAACGATGGTCGCTGCATTGACCTGGTCAATGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTATCACTTGTCCACAGCTaGTCTGGCACCTTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSLVHS*SGTLPR
Trigger: CCGGGGCAAGGTGCCAGAGCAGCTGTGGACAAGTGA...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGGCAGGCATGGCTGTTaGAGGCCTCATCACAGACGC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVGRHGC*RPHHRR
Trigger: GCGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGTGCCCGCAAGAAGCTaGGAGCATCCTGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSVPARS*EHPGAV
Trigger: AACTGCTCCAGGATGCTCGCAGCTTCTTGCGGGCAC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAATCCACCTCCTGCTCTaGCTGAGGAGGGGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVIHLLL*LRRGES
Trigger: GCTCTCACCCCTCCTCAGGCAGAGCAGGAGGTGGAT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTTGCCCATTGGGGTGTaGTTCAGGCTGAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLLPIGV*FRLRKD
Trigger: ATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACTGAGGGAAGCACAGTaGTGGCCCCATGTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKLREAQ*WPHVPK
Trigger: CTTTGGCACATGGGGCCAGCACTGTGCTTCCCTCAG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTTCCCTTCAGGTGGCCTaGTCTGGGGAGCTATGCCAG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGSLQVA*SGELCQ
Trigger: CTGGCATAGCTCCCCAGAGCAGGCCACCTGAAGGGA...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACGAGGGGTGGTTATGTaGTTCCCTTCAGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKRGVVM*FPSGGL
Trigger: CAGGCCACCTGAAGGGAAGCACATAACCACCCCTCG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAACCTGCCTTCCCCTCTaGGCACATGCAAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLTCLPL*AHAREG
Trigger: TCCTTCTCTTGCATGTGCCCAGAGGGGAAGGCAGGT...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACTTCACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGACCTGCCTTCCCCTCTaGGCACATGCAAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: TSQLMPTQPASQRHLYPLTCLPL*AHAREG
Trigger: TCCTTCTCTTGCATGTGCCCAGAGGGGAAGGCAGGT...CAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGCAAGCAGGTAGCATCATTCTaGCAGGGGTCTGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: CRCRCRNQYHPDTDHGGKQVASF*QGSEWH
Trigger: GTGCCATTCAGACCCCTGCCAGAATGATGCTACCTG...CTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTTCAAAGCAGGTTCCTTaGTTCAGGCATGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: WLAVALVAIDQVNAATIVSKQVP*FRHGFE
Trigger: CTCAAATCCATGCCTGAACCAAGGAACCTGCTTTGA...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCACTCGTCAATGTCAATaGTACACCGCTGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLTRQCQ*YTADLA
Trigger: GGCAAGGTCAGCGGTGTACCATTGACATTGACGAGT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACATTCAGGCAGGGCATCTaGGGACACACATCGACGAAG +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTFRQGI*GHTSTK
Trigger: CTTCGTCGATGTGTGTCCCCAGATGCCCTGCCTGAA...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCAGCTGCCCCCGTGCTaGCAGGGGCTACTGGCACAG +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHQLPPC*QGLLAQ
Trigger: CTGTGCCAGTAGCCCCTGCCAGCACGGGGGCAGCTG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGCCAGGTTCTCAGGTTaGTCAGCAGCACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSARFSG*SAAQSS
Trigger: GCTGGACTGTGCTGCTGACCAACCTGAGAACCTGGC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGTGCTGCTGTGTCCATaGCCGTCGATCAATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSVLLCP*PSINGV
Trigger: GACCCCATTGATCGACGGCCATGGACACAGCAGCAC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAATGGGTGCCCTCAGCTaGAGCCAGGACCATACCAAA +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTMGALS*SQDHTK
Trigger: TTTGGTATGGTCCTGGCTCCAGCTGAGGGCACCCAT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGGGGCATCATGGCAGTaGGGAAAGCCACACTGGGCA +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGGASWQ*GKPHWA
Trigger: TGCCCAGTGTGGCTTTCCCCACTGCCATGATGCCCC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCCTGCTGGGGCATCATaGCAGTGGGGAAAGCCACAC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIPAGAS*QWGKPH
Trigger: GTGTGGCTTTCCCCACTGCCATGATGCCCCAGCAGG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGCTGTGAAGGGGGTGTaGGGTACTTGCCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGAVKGV*GTCPQR
Trigger: CCTCTGTGGGCAAGTACCCCACACCCCCTTCACAGC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGGTGACCACTGTGACTaGGTGTTCGCTCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTGDHCD*VFAQQH
Trigger: ATGCTGCTGAGCGAACACCCAGTCACAGTGGTCACC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAAGGAGACTCTGGGGATaGTGTCAGGTAGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLRRLWG*CQVGML
Trigger: GAGCATCCCTACCTGACACCATCCCCAGAGTCTCCT...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAGGGGGACCTGTGGGTaGGTAACTGGCTCTTGCACG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVRGTCG*VTGSCT
Trigger: CGTGCAAGAGCCAGTTACCCACCCACAGGTCCCCCT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCACAGTCCATACCACTaGAGCCTGGTGGACATTCAC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQHSPYH*SLVDIH
Trigger: GTGAATGTCCACCAGGCTTCAGTGGTATGGACTGTG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGCTACTGGCACAGCCTaGCTCGCAGTCCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSATGTA*LAVPGT
Trigger: AGTCCCCGGGACTGCGAGTCAGGCTGTGCCAGTAGC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGACACAAGAGGGTATaGCAGGGTCCCCTGTATGGC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSRHKRV*QGPLYG
Trigger: GCCATACAGGGGACCCTGTCATACCCTCTTGTGTCT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGAGAGTGGATTCAGGTaGGGGGCAATCAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQESGFR*GAISLN
Trigger: GTTCAGACTGATTGCCCCTCACCTGAATCCACTCTC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATGGCAGGAAGGACAACTaGGGAGTGAGCCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNGRKDN*GVSPRR
Trigger: CCTCCGAGGGCTCACTCCTCAGTTGTCCTTCCTGCC...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATGCGGTTGGCACAGGTaGCCCCATTTTGACAGGCAT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKCGWHR*PHFDRH
Trigger: ATGCCTGTCAAAATGGGGGCACCTGTGCCAACCGCA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATAGCCATAGCCTCCATTaGGGTTGGCACAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHSHSLH*GWHRCP
Trigger: GGGGCACCTGTGCCAACCGCAATGGAGGCTATGGCT...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATAGGCCACACGGTCGATaGAGGTGGAGCCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHRPHGR*RWSLEY
Trigger: GTACTCCAGGCTCCACCTGCATCGACCGTGTGGCCT...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTGATCGATACACTTTaGCCCATTCAGACACGGAGT +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVVIDTL*PIQTRS
Trigger: ACTCCGTGTCTGAATGGGGCAAAGTGTATCGATCAC...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp GGCGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAAGGATTGCTATTGGCACCCGGGATTGCAGATaGAGGTGTAGGAATCAATAC +
Preference number: 4 (lower is better)
Translates to: GAIRVHTFSCMLTRIAIGTRDCR*RCRNQY
Trigger: GTATTGATTCCTACACCTGCATCTGCAATCCCGGGT...GCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCCTGTCTGACAATTCTTaGCTGTGTATGGCAGCACAC +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLLSDNS*LCMAAH
Trigger: GTGTGCTGCCATACACAGGCAAGAATTGTCAGACAG...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGACTCCATCAAATCCTaGCTGGCACTTGCAAGTGTA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLDSIKS*LALASV
Trigger: TACACTTGCAAGTGCCAGGCAGGATTTGATGGAGTC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAAGAGGCCAGGAGAGCTaGTGCTGCATCCGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKRGQES*CCIRVL
Trigger: AAGAACACGGATGCAGCAGCAGCTCTCCTGGCCTCT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATGTCCTACGGATGTCTaGAGCTTCAAGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLCPTDV*SFKVLL
Trigger: CAGCAGCACCTTGAAGCTGCAGACATCCGTAGGACA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCAGAAGTCAACACGGTaGCTGGAGGGCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGQKSTR*LEGLGS
Trigger: TGACCCCAAGCCCTCCAGGCACCGTGTTGACTTCTG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAAGTGCTGGCCCCATGTaGCAAAGGCTGCATTTCATG +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLSAGPM*QRLHFM
Trigger: CATGAAATGCAGCCTTTGGCACATGGGGCCAGCACT...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATCAAGCTTCCAGCACTaGCACTGCCTGGAGACACAA +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLSSFQH*HCLETQ
Trigger: TTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGCGGTTCATCCAATCTaGTGGGACTGGGACTGGATG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKAVHPI*WDWDWM
Trigger: CATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATGTGAAGCCTCCAATCTTATCCAGACAGGTAGCATCATTCTGGCAGGGGTCATCAATCTGGCAAACTaGCCCAGTGAAACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TCEASNLIQTGSIILAGVINLAN*PSETRR
Trigger: CCTCCTGGTTTCACTGGGCCAGTTTGCCAGATTGAT...GACCCCTGCCAGAATGATGCTACCTGTCTGGATAAGATTGGAGGCTTCACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACACCTGTGAGTAGCAGCTaGGGTGATGGGGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTPVSSS*GDGVPR
Trigger: CCGAGGGACCCCATCACCCCAGCTGCTACTCACAGG...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCAAGCACACCTCTCCTaGAGGCTGCTATGTCACAAG +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQQAHLS*RLLCHK
Trigger: CTTGTGACATAGCAGCCTCCAGGAGAGGTGTGCTTG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGACACCCTGATAGCCTaGGACACACTCGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTDTLIA*DTLASV
Trigger: TACAGATGCGAGTGTGTCCCAGGCTATCAGGGTGTC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTTGTCGGCACAATACTaGCTCAGACAGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQLSAQY*LRQVAG
Trigger: TCCTGCCACCTGTCTGAGCCAGTATTGTGCCGACAA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTTTACTTTCTTTGGCTaGGGCCCTTCATCATCGACC +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLFTFFG*GPSSST
Trigger: GGTCGATGATGAAGGGCCCCAGCCAAAGAAAGTAAA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGGTGAGAGCCAGCGATaGTGTCCTACGGATGTCTGC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGGESQR*CPTDVC
Trigger: GCAGACATCCGTAGGACACCATCGCTGGCTCTCACC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGAAGCCAACATCAATaGGGTGCAGCCATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSRSQHQ*GAAIWA
Trigger: GGCCCAGATGGCTGCACCCCATTGATGTTGGCTTCT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAGGGAAGCACAGTGCTaGCCCCATGTGCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGREAQC*PHVPKA
Trigger: AGCCTTTGGCACATGGGGCCAGCACTGTGCTTCCCT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGTGCTTCCCTTCAGGTaGCCTGCTCTGGGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVVLPFR*PALGSY
Trigger: ATAGCTCCCCAGAGCAGGCCACCTGAAGGGAAGCAC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATGGGGAAAGCCACACTaGGCAAACGGGCCATTTCTG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKWGKPH*ANGPFL
Trigger: CAGAAATGGCCCGTTTGCCCAGTGTGGCTTTCCCCA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGATAGGCTGGGAGAATaGTCTGAGCTACCTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSDRLGE*SELPAR
Trigger: ACGGGCAGGTAGCTCAGACCATTCTCCCAGCCTATC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTACGCAGGGTTTCCATATaGGGCCACCGACAGACAAAT +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLRRVSI*GHRQTN
Trigger: ATTTGTCTGTCGGTGGCCCCATATGGAAACCCTGCG...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACCCCTCTGGTCCCTGCTaGTACCTCCAGGACCCACCT +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYPSGPC*YLQDPP
Trigger: AGGTGGGTCCTGGAGGTACCAGCAGGGACCAGAGGG...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp TGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGACAGCCCCACAGACCTaGGCACTGAGACTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: CPGNIQMIDNHHLCAWFQTAPQT*ALRLRH
Trigger: GTGCCTGAGTCTCAGTGCCCAGGTCTGTGGGGCTGT...CTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ACAGTTGATGCCAACCCAGCCTGCATCACAGAGACACTTATATCCACTGAGACCGCATGCACAGACATGTaGAGCCTCCAATCTTATCCA +
Preference number: 4 (lower is better)
Translates to: TVDANPACITETLISTETACTDM*SLQSYP
Trigger: TGGATAAGATTGGAGGCTTCACATGTCTGTGCATGC...GGTCTCAGTGGATATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATCAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGGCACTGGAAACGATTaGCTTTATCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQGTGND*LYPHTA
Trigger: GGCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACGGCAAACTGGCCCAGTaGAACCAGGAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYGKLAQ*NQEDTG
Trigger: GCCTGTGTCCTCCTGGTTTCACTGGGCCAGTTTGCC...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCCACACAACACACCAGTaGAACCTGTGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPAHTTHQ*NLWHTG
Trigger: GCCAGTGTGCCACAGGTTTCACTGGTGTGTTGTGTG...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTACATCTCTGCCCTGTaGATCCTGGTGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSYISAL*ILVSRH
Trigger: GTGTCTGCTCACCAGGATTCACAGGGCAGAGATGTA...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACACATGTGCCACCATTaGAACAGGAGCTCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKHMCHH*NRSSQC
Trigger: GCACTGAGAGCTCCTGTTTCAATGGTGGCACATGTG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGACAGGTAGTCATTGGTaGGCTGTATACAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQTGSHW*AVYSPG
Trigger: GCCTGGACTGTATACAGCTCACCAATGACTACCTGT...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGGGGACAACGGCAAATaGAACCATCAGGCATGTTAC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQGDNGK*NHQACY
Trigger: GTAACATGCCTGATGGTTTCATTTGCCGTTGTCCCC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGGCAGCATCAGCCCGTaGGTAGCGGGCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVGSISP*VAGCKV
Trigger: CACCTTGCAGCCCGCTACTCACGGGCTGATGCTGCC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTCGGAAACATACGTGTaGGGAGATTCTAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLSETYV*GDSRES
Trigger: TGATTCCCTAGAATCTCCTCACACGTATGTTTCCGA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCAAGGACAACTGAGGAGTaGGCCCTCGGAGGAGCATTA +
Preference number: 4 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPRTTEE*ALGGAL
Trigger: TAATGCTCCTCCGAGGGCTCACTCCTCAGTTGTCCT...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTTACAATGTAGGCAAATaGCTGTCCACCACTTGCATC +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVYNVGK*LSTTCI
Trigger: GATGCAAGTGGTGGACAGTCATTTGCCTACATTGTA...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTACTCACAACGAGGTCCTaGATAACCCTTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLLTTRS*ITLQTL
Trigger: GAGTGTCTGAAGGGTTATGCAGGACCTCGTTGTGAG...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTCAATGTTTCAATGTTACATCTCTaGCCTGTGAATCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TILTLTMVARIGVTVVNVSMLHL*PVNPGE
Trigger: CTCACCAGGATTCACAGGGCAGAGATGTAACATTGA...AACATTGACAACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGGTCCAGAGGCGGTGTaGACACACTGCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSGPEAV*THCSPF
Trigger: GAAGGGGGAGCAGTGTGTGCACACCGCCTCTGGACC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAATTGGCATCTGCACCTaGATCCAGGAGACGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVIGICT*IQETLG
Trigger: GCCAAGCGTCTCCTGGATGCAGGTGCAGATGCCAAT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCCATGGTCATCCACTaGATTCACATCCGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSMVIH*IHIRLA
Trigger: TGCCAAGCGGATGTGAATGCAGTGGATGACCATGGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAACCCTTGGCATCCTTTaGCTCCTTGGCAAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKTLGIL*LLGKVR
Trigger: CCTAACCTTGCCAAGGAGGCAAAGGATGCCAAGGGT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATATCCCCTCTGGTCCCTaGTGGTACCTCCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNIPSGP*WYLQDP
Trigger: TGGGTCCTGGAGGTACCAGCAGGGACCAGAGGGGAT...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CGGAAACCATTCACACCGTTGATACATGTTGCACCCTTGCGACAGGGATTGGAGCACAAGGATTGCTATTaGCCATGGCACATTCATCCA +
Preference number: 4 (lower is better)
Translates to: RKPFTPLIHVAPLRQGLEHKDCY*PWHIHP
Trigger: TGGATGAATGTGCCATGGCCAATAGCAATCCTTGTG...CTCCAATCCCTGTCGCAAGGGTGCAACATGTATCAACGGTGTGAATGGTTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCTGTGAGTAGCAGCTaGGGTGATGGGGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVPVSSS*GDGVPR
Trigger: CCGAGGGACCCCATCACCCCAGCTGCTACTCACAGG...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GGCGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAAGGATTGCTATTGGCCAAGTTCCTCCATTCTaGCATGGATTCGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GAIRVHTFSCMLTRIAIGQVPPF*HGFERH
Trigger: ATGCCTTTCGAATCCATGCCAGAATGGAGGAACTTG...GCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACTGCCCTGGGTGTTATaGCAGAGACCATGGTTCATG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKLPWVL*QRPWFM
Trigger: CATGAACCATGGTCTCTGCCATAACACCCAGGGCAG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACATGTTGCCCCGTGCTaGCAGGGGTTGGACGCACAC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTHVAPC*QGLDAH
Trigger: GTGTGCGTCCAACCCCTGCCAGCACGGGGCAACATG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGCCCCGAGTGCCTGGTaGGCAAGAGCACTTGAAATG +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFAPSAW*ARALEM
Trigger: CATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGCTGGCAGGGGCTACTaGCACAGCCTGACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSAGRGY*HSLTRS
Trigger: ACTGCGAGTCAGGCTGTGCCAGTAGCCCCTGCCAGC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGGTCTAACAGGATCTTaGCTGCTTCATAGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTGLTGS*LLHSSP
Trigger: AGGGGAGCTATGAAGCAGCCAAGATCCTGTTAGACC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTAGTCAACACGGTGCCTaGAGGGCTTGGGGTCACATT +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKISQHGA*RAWGHI
Trigger: AATGTGACCCCAAGCCCTCCAGGCACCGTGTTGACT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGACTTCTTGCCCATTaGGGTGTGCTTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSRLLAH*GVLQAE
Trigger: CTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACCTGGAGACACAATGTaGTGGTGGGATAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKPGDTM*WWDSNW
Trigger: CCAGTTGCTATCCCACCACCACATTGTGTCTCCAGG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGAGCTATGCCAGGATaGGTGCCCTCAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGAMPG*VPSAGA
Trigger: GGCTCCAGCTGAGGGCACCCATCCTGGCATAGCTCC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCTTGCCCACAGAGGCTaGGAAAGGATGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKILAHRG*ERMIGW
Trigger: CCAGCCTATCATCCTTTCCCAGCCTCTGTGGGCAAG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGATGAACTTGACCACTaGTCAGGAGACTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQDELDH*SGDSGD
Trigger: ATCCCCAGAGTCTCCTGACCAGTGGTCAAGTTCATC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAAGTCAATGGAATGCTTaGCAGGAAGTAGGGGGACCT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTSQWNA*QEVGGP
Trigger: AGGTCCCCCTACTTCCTGCCAAGCATTCCATTGACT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGAAGACAACTGTCACTaGGTCCCTTGGGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTEDNCH*VPWAKE
Trigger: TTCCTTAGCCCAAGGGACCCAGTGACAGTTGTCTTC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CAA 72 bp CCTCCATTCTGGCATGGATTCGAAAGGCATTCATTTTaGTCCACTTCACAGTTGATGCCAACCCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PPFWHGFERHSF*STSQLMPTQPA
Trigger: TGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAAAAATGAATGCCTTTCGAATCCATGCCAGAATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATCAAACCCCTCCATTCTaGCACCTGTGGTTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHQTPPF*HLWLGQ
Trigger: CTGCCCTAACCACAGGTGTCAGAATGGAGGGGTTTG...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCCTCCACTCCAGCCGTTaGCACATACACAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFLHSSR*HIHSHS
Trigger: GCTATGGCTGTGTATGTGTCAACGGCTGGAGTGGAG...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACGGCAAACTGGCCCAGTaGAACCAGGAGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHGKLAQ*NQEDTG
Trigger: GCCTGTGTCCTCCTGGTTTCACTGGGCCAGTTTGCC...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCTGCACTGGTAGCCATTaGCCAGGTCAATGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFCTGSH*PGQCSD
Trigger: GTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCA...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGTGCACTGGTAGCCATTaGCCAGGTCAATGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: CPGNIQMIDNHHLCAWFQCTGSH*PGQCSD
Trigger: GTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCA...CTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACGGCACTTATCCCCAGTaGAACCCGGAAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHGTYPQ*NPEGRG
Trigger: GCCTCTGCCTTCCGGGTTTCACTGGGGATAAGTGCC...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTGCAAGTGTAACTGTTaGCGTAGTCAGAGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSCKCNC*RSQSRS
Trigger: GGACCTGCTCTGACTACGTCAACAGTTACACTTGCA...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAATCTGTATCCACCAATaGAGTCACTGCATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLICIHQ*SHCMLP
Trigger: GGGCAACATGCAGTGACTTCATTGGTGGATACAGAT...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCTGCATCCGTGTTCTTaGAGCAGTGGTCTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSLHPCS*SSGLSL
Trigger: AAGACTCAGACCACTGCTTCAAGAACACGGATGCAG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTTGCTGGGTGAGTGAGTaGAACAGGCCTAGAATGCTC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKICWVSE*NRPRML
Trigger: GAGCATTCTAGGCCTGTTTCACTCACTCACCCAGCA...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCACTATGAAAGAGGCTaGCAGAATGTTGCCACATGG +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQHYERG*QNVATW
Trigger: CCATGTGGCAACATTCTGTCAGCCTCTTTCATAGTG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTAGGCCACACGGTCGATaGAGGTGGAGCCTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVRPHGR*RWSLEY
Trigger: GTACTCCAGGCTCCACCTGCATCGACCGTGTGGCCT...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp CGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAAGGATTGCTATTGGCCACATGCTCACAAGGATTaGTATTGGCCATGGCACATT +
Preference number: 4 (lower is better)
Translates to: RHPCSHIFLHAHKDCYWPHAHKD*YWPWHI
Trigger: AATGTGCCATGGCCAATAGCAATCCTTGTGAGCATG...TGGCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACATGGATGCAGGGATTaGTCAGGCATTCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKHGCRD*SGIRSP
Trigger: AGGTGAACGAATGCCTGAGCAATCCCTGCATCCATG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCATGTACCCGGGATTGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTTACAGTTTCCATGGATaGAGGGATTGCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: PCTRDCRCRCRNQYHPDTYSFHG*RDCSGI
Trigger: AATGCCTGAGCAATCCCTGCATCCATGGAAACTGTA...AGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCAATCCCGGGTACATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAGATGCCAACCCAGCCTaGATCACAGAGACACTTATA +
Preference number: 4 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTDANPA*ITETLI
Trigger: TATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATC...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAATTCACACATGTAGCTaGCCTGGGTGTTATGGCAGA +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTIHTCS*PGCYGR
Trigger: TCTGCCATAACACCCAGGGCAGCTACATGTGTGAAT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATACATGGAGACCGACTaGAGAGATTCACCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKYMETD*RDSPGS
Trigger: AGACCCTGGTGAATCTCTGCAGTCGGTCTCCATGTA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCAGGAGAGCTGCTGCTaGATCCGTGTTCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIQESCC*IRVLEA
Trigger: TGCTTCAAGAACACGGATGCAGCAGCAGCTCTCCTG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACGGCATCAGCTGCCACTaGAGCATGGAGTGGACAGCG +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHGISCH*SMEWTA
Trigger: CGCTGTCCACTCCATGCTGCAGTGGCAGCTGATGCC...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGCAGTTGATCAGTTCTaGCACCATTCCCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIAVDQF*HHSLHS
Trigger: GCTGTGGAGGGAATGGTGGCAGAACTGATCAACTGC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGGCTGACAGAATGTTaGCACATGGAGAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLRLTEC*HMERIK
Trigger: CTTTATTCTCTCCATGTGGCAACATTCTGTCAGCCT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCATTTTGACAGGCATTaGGCTGCAGCAGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQHFDRH*AAAGIH
Trigger: ATGAATGCCTGCTGCAGCCCAATGCCTGTCAAAATG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCAGCCTCCATTGCGGTTaGCACAGGTGCCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFSLHCG*HRCPHF
Trigger: AAAATGGGGGCACCTGTGCCAACCGCAATGGAGGCT...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCTTCAGACACTCACAGTaGAAGGCGCCATCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPAFRHSQ*KAPSVF
Trigger: GAACACGGATGGCGCCTTCCACTGTGAGTGTCTGAA...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGGAGGACACAGGCACTaGAAACGATTGACTTTATCC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQGGHRH*KRLTLS
Trigger: GGATAAAGTCAATCGTTTCCAGTGCCTGTGTCCTCC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAGGAGGACACAGGCACTaGAAACGATTGACTTTATCC +
Preference number: 4 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTGGHRH*KRLTLS
Trigger: GGATAAAGTCAATCGTTTCCAGTGCCTGTGTCCTCC...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAATCAATCTGGCAAACTaGCCCAGTGAAACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKINLAN*PSETRR
Trigger: CCTCCTGGTTTCACTGGGCCAGTTTGCCAGATTGAT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCCTGTGAGTAGCAGCTaGGGTGATGGGGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVPVSSS*GDGVPR
Trigger: CCGAGGGACCCCATCACCCCAGCTGCTACTCACAGG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGCGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAAGGATTGCTATTGGCTCCTCCATTCTGGCATaGATTCGAAAGGCATTCATT +
Preference number: 4 (lower is better)
Translates to: GAIRVHTFSCMLTRIAIGSSILA*IRKAFI
Trigger: AATGAATGCCTTTCGAATCCATGCCAGAATGGAGGA...GCCAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGGTTCATGCAGGGCTTaGAGATACACTCGTCAATGT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTGSCRA*RYTRQC
Trigger: ACATTGACGAGTGTATCTCCAAGCCCTGCATGAACC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACAGGAACCTCCATTCTaGCAAGGATTGGCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVQEPPF*QGLARQ
Trigger: CTGCCTTGCCAATCCTTGCCAGAATGGAGGTTCCTG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTGGCAGGAGGGGTGCTaGGGGGTGCCGTGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVWQEGC*GVPCRV
Trigger: AACTCTACACGGCACCCCCCAGCACCCCTCCTGCCA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACACCCCTGGTCACAGTaGTTGTCTTTGAAGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKHPWSQ*LSLKWS
Trigger: AGACCACTTCAAAGACAACCACTGTGACCAGGGGTG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGAGCTGAGTGCGTTCTaGAGTCAGGGATTCACTGAC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGELSAF*SQGFTD
Trigger: GTCAGTGAATCCCTGACTCCAGAACGCACTCAGCTC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTATCCTCCTACTACCCTTaGCATCCTTTGCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSSYYP*HPLPPW
Trigger: CCAAGGAGGCAAAGGATGCCAAGGGTAGTAGGAGGA...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGACACAATGTGGTGGTaGGATAGCAACTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSDTMWW*DSNWLT
Trigger: AGTGAGCCAGTTGCTATCCCACCACCACATTGTGTC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGAGACACAATGTGGTaGTGGGATAGCAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIGDTMW*WDSNWL
Trigger: GAGCCAGTTGCTATCCCACCACCACATTGTGTCTCC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCTCAGGTGGCCTGCTCTaGGGAGCTATGCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSSGGLL*GAMPGW
Trigger: CCATCCTGGCATAGCTCCCCAGAGCAGGCCACCTGA...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGCTGGAAAGTCACAATaGGGGGCAAGGGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSAGKSQ*GARAPE
Trigger: CTCGGGAGCCCTTGCCCCCCATTGTGACTTTCCAGC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGAGCCCCCGCTGGTTaGGCAATACTGCCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGAPAG*AILPLG
Trigger: CCCTAAAGGCAGTATTGCCCAACCAGCGGGGGCTCC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGAATCTGGTACATGGTaGGCAGGGGGCCCGCAACAG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSESGTW*AGGPQQ
Trigger: CTGTTGCGGGCCCCCTGCCCACCATGTACCAGATTC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACTGCATGTTGTTGTGTaGTGGCTCAGACATGTGTGT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTLHVVV*WLRHVC
Trigger: ACACACATGTCTGAGCCACCACACAACAACATGCAG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGTTATGTCTCTACACTaGAGGTGGACTCTCTCACGC +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKVMSLH*RWTLSR
Trigger: GCGTGAGAGAGTCCACCTCCAGTGTAGAGACATAAC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCATTTTGCAGGTGTCATaGGCATCACAGCACTGGACG +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSILQVS*ASQHWT
Trigger: CGTCCAGTGCTGTGATGCCCATGACACCTGCAAAAT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGATTAGTGGGGGCCTCTaGGTACATAAATGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQISGGL*VHKCVL
Trigger: GAGGACACATTTATGTACCCAGAGGCCCCCACTAAT...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTACAGCCCCACAGACCTaGGCACTGAGACTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVTAPQT*ALRLRH
Trigger: GTGCCTGAGTCTCAGTGCCCAGGTCTGTGGGGCTGT...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp TGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGGGCAGTTGTAAGTGTTaGCCCCATCCACACAAACCC +
Preference number: 4 (lower is better)
Translates to: CPGNIQMIDNHHLCAWFQGSCKC*PHPHKP
Trigger: GGGTTTGTGTGGATGGGGTCAACACTTACAACTGCC...CTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATCTCCACTCCAGCCGTTaGCACATACACAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNLHSSR*HIHSHS
Trigger: GCTATGGCTGTGTATGTGTCAACGGCTGGAGTGGAG...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACTGAATGGCACTCATTaGTGTCCATCTCACAACGAG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKLNGTH*CPSHNE
Trigger: CTCGTTGTGAGATGGACATCAATGAGTGCCATTCAG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCTTCACAATTAACCCCTaGCGTGCCTGGCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFFTINP*RAWLAV
Trigger: AACTGCCAGCCAGGCACGTCAGGGGTTAATTGTGAA...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATTTCACAATTAACCCCTaGCGTGCCTGGCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHFTINP*RAWLAV
Trigger: AACTGCCAGCCAGGCACGTCAGGGGTTAATTGTGAA...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAGCATTCGTTCACCTGTaGGTAGCAGCTGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTAFVHL*VAAGVM
Trigger: CATCACCCCAGCTGCTACTCACAGGTGAACGAATGC...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTGTTCAGGCATGGATTTaGGGCACATTCATCAATATT +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVVQAWI*GTFINI
Trigger: AATATTGATGAATGTGCCTCAAATCCATGCCTGAAC...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGTGGGCAAGAGCACTTaGAATGGTTCACAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKVGKST*NGSQGQ
Trigger: TTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCAC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTTTGCCTCCACATTATTaGCAGCAGCTGCCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKILPPHY*QQLPSE
Trigger: TTCACTGGGCAGCTGCTGTCAATAATGTGGAGGCAA...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGAGGGGCAATCAGTCTaGACAATGAGCAAGTCTATA +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTEGQSV*TMSKSI
Trigger: TATAGACTTGCTCATTGTTCAGACTGATTGCCCCTC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCATCCACATCTTCTGTaGAGTCAGCCCCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIHPHLL*SQPLCS
Trigger: GCTACAAAGGGGCTGACTGCACAGAAGATGTGGATG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCCATGTACCCGGGATTaGAGATGCAGGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGPCTRD*RCRCRN
Trigger: ATTCCTACACCTGCATCTGCAATCCCGGGTACATGG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGAAGTCACTGCATGTTaGCCCGTGCTGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSEVTAC*PVLAGV
Trigger: AACCCCTGCCAGCACGGGGCAACATGCAGTGACTTC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGAGAGTAGGCCCCGAGTaGCTGGTGGGCAAGAGCACT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVRVGPE*LVGKST
Trigger: AGTGCTCTTGCCCACCAGGCACTCGGGGCCTACTCT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAGCCAGAGAGAGCCATaGTTACGCTTTCGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGSQREP*LRFRFA
Trigger: GGCAAAACGAAAGCGTAAGCATGGCTCTCTCTGGCT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCCAACATCAATGGGGTaGAGCCATCTGGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSPTSMG*SHLGHG
Trigger: TCCGTGGCCCAGATGGCTGCACCCCATTGATGTTGG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAACCTTGGGCATCAGCTaGCACTGCAGCATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTTLGIS*HCSMEW
Trigger: CCACTCCATGCTGCAGTGGCAGCTGATGCCCAAGGT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCCATCCACATCCTCTGTaGAGAACTGTCAAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPAHPHPL*RTVKLS
Trigger: GGACAGCTTGACAGTTCTGCACAGAGGATGTGGATG...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATACCTGCCTTCCCCTCTaGGCACATGCAAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNTCLPL*AHAREG
Trigger: TCCTTCTCTTGCATGTGCCCAGAGGGGAAGGCAGGT...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACACAAGGATTGCTATTaGCCATGGCACATTCATCCA +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTHKDCY*PWHIHP
Trigger: TGGATGAATGTGCCATGGCCAATAGCAATCCTTGTG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCCAGGTAGCATCATTCTaGCAGGGGTCTGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFQVASF*QGSEWH
Trigger: GTGCCATTCAGACCCCTGCCAGAATGATGCTACCTG...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CACTCACAGTGGAAGGCGCCATCCGTGTTCACACATTTTCCTGCATGCTCACAATCAGACACGGAGTACTaGAACAGTCATCAATATCAA +
Preference number: 4 (lower is better)
Translates to: HSQWKAPSVFTHFPACSQSDTEY*NSHQYQ
Trigger: TTGATATTGATGACTGTTCCAGTACTCCGTGTCTGA...TTGTGAGCATGCAGGAAAATGTGTGAACACGGATGGCGCCTTCCACTGTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTTCTGGTCACTGCAGATaGCGCCCATGTACCCGGGAT +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVSGHCR*RPCTRD
Trigger: ATCCCGGGTACATGGGCGCCATCTGCAGTGACCAGA...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACATTCTGGCAAGGATTaGCAAGGCAGTCATCAATGT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTHSGKD*QGSHQC
Trigger: ACATTGATGACTGCCTTGCCAATCCTTGCCAGAATG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCACCTTTGTTTTTACATaGAGACCGACTGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLTFVFT*RPTAEI
Trigger: AATCTCTGCAGTCGGTCTCCATGTAAAAACAAAGGT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATGTCACAAGAGACATTaGGCACGTCACAATAGGCAC +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKCHKRH*ARHNRH
Trigger: GTGCCTATTGTGACGTGCCCAATGTCTCTTGTGACA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCAGACACCTGAGTGCTaGCACAAGTGTTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIQTPEC*HKCSTS
Trigger: GCTTGTTGAACACTTGTGCCAGCACTCAGGTGTCTG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCCACCATTAAGGCAATaGGGACCCCGGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSPPLRQ*GPRAQS
Trigger: TGACTGTGCCCGGGGTCCCCATTGCCTTAATGGTGG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGTCTTGCTGTTCCCCTaGCATTCAAAGTTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQVLLFP*HSKLSN
Trigger: GTTTGACAACTTTGAATGCCAGGGGAACAGCAAGAC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTTCACTGTTGCACCCCTaGTCACAGTGGTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKISLLHP*SQWLSL
Trigger: CAAAGACAACCACTGTGACCAGGGGTGCAACAGTGA...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCACCATGAGTTCCCCCTaGGAGTCCCGCTTAATGCGC +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSTMSSP*ESRLMR
Trigger: GCGCATTAAGCGGGACTCCCAGGGGGAACTCATGGT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATGGGGTGCAGCCATCTaGGCCACGGACATTCACATC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTWGAAI*ATDIHI
Trigger: GATGTGAATGTCCGTGGCCCAGATGGCTGCACCCCA...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCATCCAGGAGACGCTTaGCAGCATCAGCCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSHPGDA*QHQPVS
Trigger: ACTCACGGGCTGATGCTGCCAAGCGTCTCCTGGATG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCACTGCAGCATGGAGTaGACAGCGGCCCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHHCSME*TAAHVV
Trigger: GACAACATGGGCCGCTGTCCACTCCATGCTGCAGTG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCCTGCATGTCTCGGTTaGCCCCATTTTTCAACAACA +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSPACLG*PHFSTT
Trigger: TGTTGTTGAAAAATGGGGCCAACCGAGACATGCAGG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGGTGCCTGGAGGGCTTaGGGTCACATTGTATTCATC +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFGAWRA*GHIVFI
Trigger: GATGAATACAATGTGACCCCAAGCCCTCCAGGCACC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCATTGGAGAGGATGTaGTGTCGGAAACATACGTGT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSLERM*CRKHTC
Trigger: ACACGTATGTTTCCGACACCACATCCTCTCCAATGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCTGGAATCTGGTACATaGTGGGCAGGGGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVLESGT*WAGGPQ
Trigger: TTGCGGGCCCCCTGCCCACCATGTACCAGATTCCAG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACAGTCAGAAGCAGAGTaGGGTGATGAACTTGACCAC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVQSEAE*GDELDH
Trigger: GTGGTCAAGTTCATCACCCCACTCTGCTTCTGACTG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTCTCTACACTGGAGGTaGACTCTCTCACGCATAAAC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSSLHWR*TLSRIN
Trigger: GTTTATGCGTGAGAGAGTCCACCTCCAGTGTAGAGA...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCATCTTCTCATGGATATaGCAGAAGCCTGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSIFSWI*QKPAGL
Trigger: AAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGAT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCTGTGGGTGGGTAACTaGCTCTTGCACGAGTTAACT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGLWVGN*LLHELT
Trigger: AGTTAACTCGTGCAAGAGCCAGTTACCCACCCACAG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGTTTGTCACCAGCTATaGCTAGTGCACAGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKVCHQL*LVHRRV
Trigger: CACTCTTCTGTGCACTAGCCATAGCTGGTGACAAAC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
3UTR CAA 72 bp CTTTCATGGGCCAGAATGATCAAAAGCACAAAGGTCTaGCCCTATAACATGCTGGTAGGGCTACAATCACGG +
Preference number: 4 (lower is better)
Translates to: LSWARMIKSTKV*PYNMLVGLQSR
Trigger: CCGTGATTGTAGCCCTACCAGCATGTTATAGGGCAAGACCTTTGTGCTTTTGATCATTCTGGCCCATGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCAAACCCCTCCATTCTaGCACCTGTGGTTAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSQTPPF*HLWLGQ
Trigger: CTGCCCTAACCACAGGTGTCAGAATGGAGGGGTTTG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCACACAACACACCAGTaGAACCTGTGGCACACTGGC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHHTTHQ*NLWHTG
Trigger: GCCAGTGTGCCACAGGTTTCACTGGTGTGTTGTGTG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAATGCACTGGTAGCCATTaGCCAGGTCAATGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKCTGSH*PGQCSD
Trigger: GTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCA...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTCCCTGTGAATCCTGGTaGGCAGACACAACTGTAGCG +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIPCESW*ADTTVA
Trigger: CGCTACAGTTGTGTCTGCTCACCAGGATTCACAGGG...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCATACATCTCTGCCCTGTaGATCCTGGTGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPYISAL*ILVSRH
Trigger: GTGTCTGCTCACCAGGATTCACAGGGCAGAGATGTA...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACTACATCTCTGCCCTGTaGATCCTGGTGAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYYISAL*ILVSRH
Trigger: GTGTCTGCTCACCAGGATTCACAGGGCAGAGATGTA...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAACCATTCACACCGTTaGTACATGTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGNHSHR*YMLHPC
Trigger: GCAAGGGTGCAACATGTATCAACGGTGTGAATGGTT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGACACTTATATCCACTaGGACCTCCAGTACAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSDTYIH*DLQYSF
Trigger: GAAACTGTACTGGAGGTCTCAGTGGATATAAGTGTC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCATGTCCACTTCACAGTTaGTGCCAACCCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPCPLHS*CQPSLH
Trigger: ATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACA...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACTGTCCACTTCACAGTTaGTGCCAACCCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYCPLHS*CQPSLH
Trigger: ATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACA...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCACAGTGGTTGTCTTTaGAGTGGTCTGCACAGTATT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSHSGCL*SGLHSI
Trigger: AATACTGTGCAGACCACTTCAAAGACAACCACTGTG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCTTCATCACTCAAATCTaGGCTGCCTCCTCGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFFITQI*AASSER
Trigger: TCTCTCCGAGGAGGCAGCTCAGATTTGAGTGATGAA...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAAGAAACAACATACTTaGAAGGTTTGTGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLKKQHT*KVCAEN
Trigger: GTTCTCAGCACAAACCTTTCAAGTATGTTGTTTCTT...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGTTTCATATGCTGGGTaGGTGAGTGAAACAGGCCTA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIVSYAG*VSETGL
Trigger: TAGGCCTGTTTCACTCACTCACCCAGCATATGAAAC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGTAAGTGGGAAGCACTaGTGCATACTTGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIVSGKH*CILAAI
Trigger: TATGGCTGCAAGTATGCATCAGTGCTTCCCACTTAC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAAGGATGCAATGGATTTaGGCATCACAGCCAATTGCT +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKRMQWI*ASQPIA
Trigger: AGCAATTGGCTGTGATGCTCAAATCCATTGCATCCT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGTGATGTTTCCTATTTaGCAGATGCTTTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQVMFPI*QMLFPQ
Trigger: CTGGGGAAAAAGCATCTGTCAAATAGGAAACATCAC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCATCCACATCCTCTGTaGAGAACTGTCCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGHPHPL*RTVLSI
Trigger: AATGGACAGGACAGTTCTGCACAGAGGATGTGGATG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTATGACACAGGAGACCTaGCTTCCCCTCTGGGCACAT +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIMTQET*LPLWAH
Trigger: ATGTGCCCAGAGGGGAAGGCAGGTCTCCTGTGTCAT...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTACCCGGGATTGCAGATaGAGGTGTAGGAATCAATAC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKITRDCR*RCRNQY
Trigger: GTATTGATTCCTACACCTGCATCTGCAATCCCGGGT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACACATCAATCTGGTCACTaGAGATGGCGCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTHQSGH*RWRPCT
Trigger: GGTACATGGGCGCCATCTGCAGTGACCAGATTGATG...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATCAATGTTACATCTCTaGCCTGTGAATCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKSMLHL*PVNPGE
Trigger: CTCACCAGGATTCACAGGGCAGAGATGTAACATTGA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACTACATGTTGCACCCTTaGGACAGGGATTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYYMLHP*DRDWRH
Trigger: GTGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTA...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTACCGTTGATACATGTTaGACCCTTGCGACAGGGATT +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKITVDTC*TLATGI
Trigger: AATCCCTGTCGCAAGGGTGCAACATGTATCAACGGT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACACATGGATGCAGGGATTaGTCAGGCATTCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: WKHSNDRQPSSMCLVPATHGCRD*SGIRSP
Trigger: AGGTGAACGAATGCCTGAGCAATCCCTGCATCCATG...TGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTACCTCTCCTGGAGGCTaGTATGTCACAAGAGACATT +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKITSPGG*YVTRDI
Trigger: AATGTCTCTTGTGACATAGCAGCCTCCAGGAGAGGT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGCACTCGACCGTGTTaGACAGCTCATCACACTGGT +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGTRPC*TAHHTG
Trigger: ACCAGTGTGATGAGCTGTGCAACACGGTCGAGTGCC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAACATACTTGCATGTCTTaGTGTTCCCCTGGCATTCAA +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKHTCMS*CSPGIQ
Trigger: TTGAATGCCAGGGGAACAGCAAGACATGCAAGTATG...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGCCAGGAGAGCTGCTaGTGCATCCGTGTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGQESC*CIRVLE
Trigger: TTCAAGAACACGGATGCAGCAGCAGCTCTCCTGGCC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCTTACGCTTTCGTTTTaGCATGATTACCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGLTLSF*HDYPQQ
Trigger: CTGCTGGGGGTAATCATGGCAAAACGAAAGCGTAAG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGAGCAGAAGAGTCCTCTaGATCTTCATCTTCATCACT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSRRVL*IFIFIT
Trigger: AGTGATGAAGATGAAGATGCAGAGGACTCTTCTGCT...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACAATGTCATGGTGCATaGGATCCCGAGCCACATCCC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTQCHGA*DPEPHP
Trigger: GGGATGTGGCTCGGGATCGCATGCACCATGACATTG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGAAAAAGATAGTGCATaGTGGGCATGGACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFEKDSA*WAWTGA
Trigger: TGCCCCAGTCCATGCCCAGCATGCACTATCTTTTTC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTATCTCATTCACCTCCATaGGGTTCATCCAATCTGCTG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSHSPP*GSSNLL
Trigger: CAGCAGATTGGATGAACCGCATGGAGGTGAATGAGA...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACAACCATCATCTATGTaGCTGGTTCCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPQPSSM*LVPATY
Trigger: GTATGTGGCTGGAACCAGGCACATAGATGATGGTTG...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTAGCCTCCATTGCGGTTaGCACAGGTGCCCCCATTTT +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVSLHCG*HRCPHF
Trigger: AAAATGGGGGCACCTGTGCCAACCGCAATGGAGGCT...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCCCTTTGTAGCCTTGTaGGCAGGTGCAAATATATTG +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSPFVAL*AGANIL
Trigger: CAATATATTTGCACCTGCCCACAAGGCTACAAAGGG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGCCACAATGTTTCCTCAAAGCTCAAGATCCAGTCAGTAAAGGCAGGAAGGACAGATTGCTATTGGCCATaGCACATTCATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: GHNVSSKLKIQSVKAGRTDCYWP*HIHPHL
Trigger: AAGATGTGGATGAATGTGCCATGGCCAATAGCAATC...TGTCCTTCCTGCCTTTACTGACTGGATCTTGAGCTTTGAGGAAACATTGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp TGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGACCATGGTGGCAAGTCATCAATATCAATCTaGCAAACTGGCCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: CRCRCRNQYHPDTDHGGKSSISI*QTGPVK
Trigger: TTTCACTGGGCCAGTTTGCCAGATTGATATTGATGA...CTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCCTCCATTCTGGCATaGATTCGAAAGGCATTCATT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSSILA*IRKAFI
Trigger: AATGAATGCCTTTCGAATCCATGCCAGAATGGAGGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTATTCTTGCCTGTGTATaGCAGCACACAGTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGILACV*QHTVAS
Trigger: ACTTGCCACTGTGTGCTGCCATACACAGGCAAGAAT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTATTCTCACAAGGGTTTaGGGAACAGGGAGCCAATAC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIILTRV*GTGSQY
Trigger: GTATTGGCTCCCTGTTCCCCAAACCCTTGTGAGAAT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTCCCTCATTCAGGCATaGATGAGAGCTGCATTCATT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSSLIQA*MRAAFI
Trigger: AATGAATGCAGCTCTCATCCATGCCTGAATGAGGGA...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCAAGCTGCGAGCATCCTaGAGCAGTTGTTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSKLRAS*SSCSGG
Trigger: GCCACCTGAACAACTGCTCCAGGATGCTCGCAGCTT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAGCCTTTACTTTCTTTaGCTGGGGCCCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGSLYFL*LGPFII
Trigger: GATGATGAAGGGCCCCAGCCAAAGAAAGTAAAGGCT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAAACATCTCATTGTACTaGGTCTCATTCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTNISLY*VSFTSM
Trigger: CATGGAGGTGAATGAGACCCAGTACAATGAGATGTT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCTGGTCAGGAGACTCTaGGGATGGTGTCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVLVRRL*GWCQVG
Trigger: CCCTACCTGACACCATCCCCAGAGTCTCCTGACCAG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCCAAAGGGAATGTCATaGCCGCTTCAGAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGPKGMS*PLQRKR
Trigger: TCTTTTCCTCTGAAGCGGCCATGACATTCCCTTTGG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTGGACCCACCTGTGTATaGCAGCACACAGTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIGPTCV*QHTVAS
Trigger: ACTTGCCACTGTGTGCTGCCATACACAGGTGGGTCC...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTGGACCCACCTGTGTATaGCAGCACACAGTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVGPTCV*QHTVAS
Trigger: ACTTGCCACTGTGTGCTGCCATACACAGGTGGGTCC...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTGTCAAGTATCCCCTCTaGTCCCTGCTGGTACCTCCA +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVVKYPL*SLLVPP
Trigger: TGGAGGTACCAGCAGGGACCAGAGGGGATACTTGAC...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
3UTR CAA 72 bp TATAGCAACTACTTCGCATTTCCATTGGAAGGCACCTaGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: YSNYFAFPLEGT*SLSNHLFVTSY
Trigger: ATAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAATGCGAAGTAGTTGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACAGCATGCACAGACATGTaGAGCCTCCAATCTTATCCA +
Preference number: 4 (lower is better)
Translates to: WKHSNDRQPSSMCLVPATACTDM*SLQSYP
Trigger: TGGATAAGATTGGAGGCTTCACATGTCTGTGCATGC...TGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCACACAATGCACACCTTTaGAACCTGGCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPHNAHL*NLACTD
Trigger: GTCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTG...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATGGCACTGGAAACGATTaGCTTTATCCACACACTGCC +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNGTGND*LYPHTA
Trigger: GGCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCC...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTATCATTCAGGCATGGATaGGAGCTGCATTCATTGATC +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSFRHG*ELHSLI
Trigger: GATCAATGAATGCAGCTCTCATCCATGCCTGAATGA...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCTTGAAGCAGTGGTCTaGGTCTTGAACACACTGGCG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSLEAVV*VLNTLA
Trigger: CGCCAGTGTGTTCAAGACTCAGACCACTGCTTCAAG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACGAGTCAGGGATTCACTaGCGACAGACACAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHESGIH*RQTQEG
Trigger: ACCCTCTTGTGTCTGTCGTCAGTGAATCCCTGACTC...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCATCCGCTTGGCAGTTaGTCAGTTCTGCCACCATTC +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSHPLGS*SVLPPF
Trigger: GAATGGTGGCAGAACTGATCAACTGCCAAGCGGATG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACACAGCAGCTGCCCAGTaGAGAGCAGATTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHTAAAQ*RADFPW
Trigger: CCATGGAAAATCTGCTCTTCACTGGGCAGCTGCTGT...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGATCCATATGGTCTGTaGTGTCTCGATTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSDPYGL*CLDWQN
Trigger: ATTTTGCCAATCGAGACATCACAGACCATATGGATC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCCCACAGATGACAGGTaGGAGAGCAGAAGTCAACAC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHPTDDR*ESRSQH
Trigger: GTGTTGACTTCTGCTCTCTCACCTGTCATCTGTGGG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAAGCATAACTGTGCTGTaGAGGGGGTGTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTSITVL*RGCGVL
Trigger: AAGTACCCCACACCCCCTTCACAGCACAGTTATGCT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTAGTCCATGTCTTCAGTaGGAACATACTGGGTATACC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKISPCLQ*EHTGYT
Trigger: GGTATACCCAGTATGTTCTCACTGAAGACATGGACT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAAGGAAAATGTTCTGTTaGGTTTCTACGTTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTRKMFC*VSTLVA
Trigger: GGCAACTAACGTAGAAACTCAACAGAACATTTTCCT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGCTGGATCAGTAGCTaGTACTTTCAGAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGWISS*YFQKWG
Trigger: GCCCCACTTCTGAAAGTATCAGCTACTGATCCAGCC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTTGTCCTCCTCATCACTaGAACCTGTTGTCTGTAATG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGCPPHH*NLLSVM
Trigger: CATTACAGACAACAGGTTTCAGTGATGAGGAGGACA...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAACCCAAATGAGAAAGTaGTTATCCATCTTACCTTCC +
Preference number: 4 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLTQMRK*LSILPS
Trigger: GGAAGGTAAGATGGATAATCACTTTCTCATTTGGGT...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCAAATTATGACATCATaGGGTAACACTGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIQIMTS*GNTARP
Trigger: TGGCCTGGCAGTGTTACCTCATGATGTCATAATTTG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAAGCCTTGTGGGCAGGTaGAAATATATTGCCCATTTA +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKSLVGR*KYIAHL
Trigger: TAAATGGGCAATATATTTGCACCTGCCCACAAGGCT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATCATCCACATCTTCTGTaGAGTCAGCCCCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNHPHLL*SQPLCS
Trigger: GCTACAAAGGGGCTGACTGCACAGAAGATGTGGATG...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACATGCTCACAAGGATTaGTATTGGCCATGGCACATT +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVHAHKD*YWPWHI
Trigger: AATGTGCCATGGCCAATAGCAATCCTTGTGAGCATG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATGCTCACAAGGATTaGTATTGGCCATGGCACATT +
Preference number: 4 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPHAHKD*YWPWHI
Trigger: AATGTGCCATGGCCAATAGCAATCCTTGTGAGCATG...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GGAATCAATACCATCCTGACACTGACCATGGTGGCAAGGATCGGGGTCACAGTTTGTTCACACAAGGGTTaGTCTGACATTCATTTATTT +
Preference number: 4 (lower is better)
Translates to: GINTILTLTMVARIGVTVCSHKG*SDIHLF
Trigger: AAATAAATGAATGTCAGAGCAACCCTTGTGTGAACA...AACTGTGACCCCGATCCTTGCCACCATGGTCAGTGTCAGGATGGTATTGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR GCA 90 bp TGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACAGTGATCGATACACTTTaGCCCATTCAGACACGGAGT +
Preference number: 4 (lower is better)
Translates to: WKHSNDRQPSSMCLVPATVIDTL*PIQTRS
Trigger: ACTCCGTGTCTGAATGGGGCAAAGTGTATCGATCAC...TGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACATCAATCTGGTCACTaGAGATGGCGCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTHQSGH*RWRPCT
Trigger: GGTACATGGGCGCCATCTGCAGTGACCAGATTGATG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTCATCAATCTGGTCACTaGAGATGGCGCCCATGTACC +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIHQSGH*RWRPCT
Trigger: GGTACATGGGCGCCATCTGCAGTGACCAGATTGATG...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCGTTCAGGCAAGGGCTaGTGTAACATTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGRSGKG*CNIHQS
Trigger: AGATTGATGAATGTTACAGCAGCCCTTGCCTGAACG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACTACATGTTGCACCCTTaGGACAGGGATTGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHYMLHP*DRDWRH
Trigger: GTGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTA...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTTACAGTTTCCATGGATaGAGGGATTGCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGYSFHG*RDCSGI
Trigger: AATGCCTGAGCAATCCCTGCATCCATGGAAACTGTA...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGGATGCCAACCCAGCCTaGATCACAGAGACACTTATA +
Preference number: 4 (lower is better)
Translates to: CPGNIQMIDNHHLCAWFQDANPA*ITETLI
Trigger: TATAAGTGTCTCTGTGATGCAGGCTGGGTTGGCATC...CTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAAATTTGGTGACTCTTTaGAAACAGCAGCATTCTCAC +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTNLVTL*KQQHSH
Trigger: GTGAGAATGCTGCTGTTTGCAAAGAGTCACCAAATT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAAACCAGGGTACCTTCTaGCAGGTTCTCAGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTNQGTF*QVLRLV
Trigger: GACCAACCTGAGAACCTGGCAGAAGGTACCCTGGTT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCACTCAAATCTGAGCTaGCTCCTCGGAGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSHSNLS*LLGEKP
Trigger: TGGCTTCTCTCCGAGGAGGCAGCTCAGATTTGAGTG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCGATCAGTTACTCGGTTaGGAATCAGAATCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSDQLLG*ESESGR
Trigger: TCTTCCAGATTCTGATTCGCAACCGAGTAACTGATC...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCTCTTCCTTGTTGTCCTaGATGTCTCGGTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSSSLLS*MSRLAP
Trigger: TGGGGCCAACCGAGACATGCAGGACAACAAGGAAGA...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACTTCCAGCACTGCCACTaGCTGGAGACACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHFQHCH*LETQCG
Trigger: ACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAA...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCTGCAGGGCTTAAAATaGAGTCCAAGCTGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGLQGLK*SPSCKN
Trigger: ATTCTTGCAGCTTGGACTGCATTTTAAGCCCTGCAG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACCAAGGAGGAGGAGATaGGTAGGTCAATTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTPRRRR*VGQFRQ
Trigger: CTGCCTGAATTGACCTACGCATCTCCTCCTCCTTGG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTAGGCAGAACTTATTTTaGAGGTGTCATGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIRQNLF*RCHGHH
Trigger: GTGATGCCCATGACACCTGCAAAATAAGTTCTGCCT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACCCTTTGTAGCCTTGTaGGCAGGTGCAAATATATTG +
Preference number: 4 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPPFVAL*AGANIL
Trigger: CAATATATTTGCACCTGCCCACAAGGCTACAAAGGG...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTTTCAGACACTCACAGTaGAAGGCGCCATCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIFRHSQ*KAPSVF
Trigger: GAACACGGATGGCGCCTTCCACTGTGAGTGTCTGAA...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAACAGGTAGCATCATTCTaGCAGGGGTCTGAATGGCAC +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKQVASF*QGSEWH
Trigger: GTGCCATTCAGACCCCTGCCAGAATGATGCTACCTG...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACCCAGTACAGTTTCCATaGATGCAGGGATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYPVQFP*MQGLLR
Trigger: CCTGAGCAATCCCTGCATCCATGGAAACTGTACTGG...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACATACCACTGAAGCCTaGTGGACATTCACACATGTA +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVHTTEA*WTFTHV
Trigger: TACATGTGTGAATGTCCACCAGGCTTCAGTGGTATG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACAGCATCCTGTCCCACTaGCTCACGACGCTTGTGATT +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHSILSH*LTTLVI
Trigger: AATCACAAGCGTCGTGAGCCAGTGGGACAGGATGCT...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACATACCATCATTCATCCTaGCATCTAGATCAGTTACTC +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTYHHSS*HLDQLL
Trigger: GAGTAACTGATCTAGATGCCAGGATGAATGATGGTA...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGAACTCTCAGACAGTTaGACCTTCTCACTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFELSDS*TFSLRD
Trigger: GTCTCTGAGTGAGAAGGTCCAACTGTCTGAGAGTTC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGGGACTGGGACTGGATaGAGCCTACTCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVGTGTG*SLLKLP
Trigger: TGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCCTACCTCTAGAAGCTaGCTCCAGAGATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGPTSRS*LQRFLH
Trigger: ATGAAGAAATCTCTGGAGCCAGCTTCTAGAGGTAGG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCACTGAATGGCACTCATTaGTGTCCATCTCACAACGAG +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPLNGTH*CPSHNE
Trigger: CTCGTTGTGAGATGGACATCAATGAGTGCCATTCAG...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCACAATGCACACCTTTaGAACCTGGCATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHHNAHL*NLACTD
Trigger: GTCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATAACCATTCACACCGTTaGTACATGTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNNHSHR*YMLHPC
Trigger: GCAAGGGTGCAACATGTATCAACGGTGTGAATGGTT...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATGACACTTATATCCACTaGGACCTCCAGTACAGTTTC +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHDTYIH*DLQYSF
Trigger: GAAACTGTACTGGAGGTCTCAGTGGATATAAGTGTC...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTGTCCACTTCACAGTTaGTGCCAACCCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVCPLHS*CQPSLH
Trigger: ATGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGAGAGCTGCATTCATTaGTCTCATGGAGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTESCIH*SHGGRR
Trigger: CCTTCTGCCTCCATGAGATCAATGAATGCAGCTCTC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAATTGATGCAGACACCTaGGTGCTGGCACAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTIDADT*VLAQVF
Trigger: GAACACTTGTGCCAGCACTCAGGTGTCTGCATCAAT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTTTTCTTCATAGCAGCTaGCTTCTCACCATAATAGGG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGFLHSS*LLTIIG
Trigger: CCCTATTATGGTGAGAAGTCAGCTGCTATGAAGAAA...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACTCGCTCAGCAGCATTTaGGGAAGCATAACTGTGCTG +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHSLSSI*GSITVL
Trigger: CAGCACAGTTATGCTTCCTCAAATGCTGCTGAGCGA...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTATTTCATGGGCCAGAATaGTCAAAAGCACAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVFHGPE*SKAQRS
Trigger: AGACCTTTGTGCTTTTGATCATTCTGGCCCATGAAA...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTTGAAAGGTTTGTGCTaGGAACCATACCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQLKGLC*EPYQSK
Trigger: TTTACTTTGGTATGGTTCTCAGCACAAACCTTTCAA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGATAAAACTTTACACTaGCCAGGCCCATACACAGAA +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGDKTLH*PGPYTE
Trigger: TTCTGTGTATGGGCCTGGTCAGTGTAAAGTTTTATC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAATAATCAGTAGAGACTaGTCATCTGACAAACGGAAG +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKIISRD*SSDKRK
Trigger: CTTCCGTTTGTCAGATGATCAGTCTCTACTGATTAT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATTACAATGTAGGCAAATaGCTGTCCACCACTTGCATC +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHYNVGK*LSTTCI
Trigger: GATGCAAGTGGTGGACAGTCATTTGCCTACATTGTA...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCGTTCACACATTTTCCTaGATGCTCACAAGGATTGCT +
Preference number: 4 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPAVHTFS*MLTRIA
Trigger: AGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAAC...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAACTCACAACGAGGTCCTaGATAACCCTTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKLTTRS*ITLQTL
Trigger: GAGTGTCTGAAGGGTTATGCAGGACCTCGTTGTGAG...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCACTTTATCCACACACTaGCCATTGTTCACACAAGGG +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFTLSTH*PLFTQG
Trigger: CCCTTGTGTGAACAATGGGCAGTGTGTGGATAAAGT...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACTTTATCCACACACTaGCCATTGTTCACACAAGGG +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHTLSTH*PLFTQG
Trigger: CCCTTGTGTGAACAATGGGCAGTGTGTGGATAAAGT...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAACCCGGGATTGCAGATaGAGGTGTAGGAATCAATAC +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPTRDCR*RCRNQY
Trigger: GTATTGATTCCTACACCTGCATCTGCAATCCCGGGT...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTCCATGTACCCGGGATTaGAGATGCAGGTGTAGGAAT +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIPCTRD*RCRCRN
Trigger: ATTCCTACACCTGCATCTGCAATCCCGGGTACATGG...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACACCGTTGATACATGTTaGACCCTTGCGACAGGGATT +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYTVDTC*TLATGI
Trigger: AATCCCTGTCGCAAGGGTGCAACATGTATCAACGGT...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAACATGGATGCAGGGATTaGTCAGGCATTCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKHGCRD*SGIRSP
Trigger: AGGTGAACGAATGCCTGAGCAATCCCTGCATCCATG...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGTCTTTGAAGTGGTCTaGACAGTATTTGTCATACTT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTVFEVV*TVFVIL
Trigger: AAGTATGACAAATACTGTGCAGACCACTTCAAAGAC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCACGACGCTTGTGATTaGTTGCATCTCGGCGAAGAG +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVHDACD*LHLGEE
Trigger: CTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGGCTTGTATTCATCTTaGATTTCCACAAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQGLYSS*ISTNLS
Trigger: AGACAAGTTTGTGGAAATGCAAGATGAATACAAGCC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGCACTGGACGGAAGTTaGAGTGTAGCCATGGACCAA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVALDGS*SVAMDQ
Trigger: TTGGTCCATGGCTACACTGCAACTTCCGTCCAGTGC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAATTTGTAAACTATTATaGCAACAGACACGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTICKLL*QQTRRV
Trigger: AACCCTGCGTGTCTGTTGGCATAATAGTTTACAAAT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCACAACCATCATCTATGTaGCTGGTTCCAGCCACATAC +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPQPSSM*LVPATY
Trigger: GTATGTGGCTGGAACCAGGCACATAGATGATGGTTG...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACCATTTTGACAGGCATTaGGCTGCAGCAGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYHFDRH*AAAGIH
Trigger: ATGAATGCCTGCTGCAGCCCAATGCCTGTCAAAATG...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATCATTTTGACAGGCATTaGGCTGCAGCAGGCATTCAT +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNHFDRH*AAAGIH
Trigger: ATGAATGCCTGCTGCAGCCCAATGCCTGTCAAAATG...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATCCCTTTGTAGCCTTGTaGGCAGGTGCAAATATATTG +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHPFVAL*AGANIL
Trigger: CAATATATTTGCACCTGCCCACAAGGCTACAAAGGG...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATCACAAGGATTGCTATTaGCCATGGCACATTCATCCA +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHHKDCY*PWHIHP
Trigger: TGGATGAATGTGCCATGGCCAATAGCAATCCTTGTG...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATCACACCTTTGAAACCTaGCATGCACAGACATGTGAA +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHHTFET*HAQTCE
Trigger: TTCACATGTCTGTGCATGCCAGGTTTCAAAGGTGTG...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGGAGGACACAGGCACTaGAAACGATTGACTTTATCC +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPGGHRH*KRLTLS
Trigger: GGATAAAGTCAATCGTTTCCAGTGCCTGTGTCCTCC...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTATCAATCTGGCAAACTaGCCCAGTGAAACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIINLAN*PSETRR
Trigger: CCTCCTGGTTTCACTGGGCCAGTTTGCCAGATTGAT...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCTCAGACACGGAGTACTaGAACAGTCATCAATATCAA +
Preference number: 4 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSSDTEY*NSHQYQ
Trigger: TTGATATTGATGACTGTTCCAGTACTCCGTGTCTGA...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATCCATACAGATTCCATaGATACAAGGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: DASVESSHGYGRSLQGLKSIQIP*IQGLLA
Trigger: TGCAAGTAACCCTTGTATCCATGGAATCTGTATGGA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCCAGTACAGTTTCCATaGATGCAGGGATTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHPVQFP*MQGLLR
Trigger: CCTGAGCAATCCCTGCATCCATGGAAACTGTACTGG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACACAAGTTCCTCCATTCTaGCATGGATTCGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: WKHSNDRQPSSMCLVPATQVPPF*HGFERH
Trigger: ATGCCTTTCGAATCCATGCCAGAATGGAGGAACTTG...TGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTATGGCAGAGACCATaGTTCATGCAGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTLWQRP*FMQGLE
Trigger: CTCCAAGCCCTGCATGAACCATGGTCTCTGCCATAA...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGCATTCACATCCGCTTaGCAGTTGATCAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTAFTSA*QLISSA
Trigger: GGCAGAACTGATCAACTGCCAAGCGGATGTGAATGC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGTTCATCCAATCTGCTaGGACTGGGACTGGATGGAG +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVVHPIC*DWDWME
Trigger: CTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAAC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCAAACGGGCCATTTCTaGAATCTGGTACATGGTGGG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSQTGHF*NLVHGG
Trigger: CCCACCATGTACCAGATTCCAGAAATGGCCCGTTTG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCATGTTGTTGTGTGGTaGCTCAGACATGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSHVVVW*LRHVCP
Trigger: GGGACACACATGTCTGAGCCACCACACAACAACATG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCCATACAGGCAGTCAATaGAATGCTTGGCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFHTGSQ*NAWQEV
Trigger: TACTTCCTGCCAAGCATTCCATTGACTGCCTGTATG...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCTGTCACTGGGTCCCTTaGGCTAAGGAAAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSCHWVP*AKESSV
Trigger: GACTGAACTTTCCTTAGCCCAAGGGACCCAGTGACA...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGACAAATCAGGTAAGTaGGAAGCACTGATGCATACT +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGDKSGK*EALMHT
Trigger: AGTATGCATCAGTGCTTCCCACTTACCTGATTTGTC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTTCTGTGAATAATAAATaGGTCCAAGGGCAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKISVNNK*VQGQRV
Trigger: GACTCTCTGCCCTTGGACCCATTTATTATTCACAGA...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCCATCATCTATGTGCCTaGTTCCAGCCACATACAATT +
Preference number: 4 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPAHHLCA*FQPHTI
Trigger: AATTGTATGTGGCTGGAACCAGGCACATAGATGATG...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCGGGCCTAGTATATACTaGGCACTGTTTGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSGPSIY*ALFVGV
Trigger: AACACCTACAAACAGTGCCCAGTATATACTAGGCCC...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602566.6
3UTR CAA 72 bp ACTAAAGTACAATGTAGGCAAATGACTGTCCACCACTaGCATCTTAGGAGGCCACAATGTTTCCTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: TKVQCRQMTVHH*HLRRPQCFLKA
Trigger: AGCTTTGAGGAAACATTGTGGCCTCCTAAGATGCAAGTGGTGGACAGTCATTTGCCTACATTGTACTTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR TCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGCATGCACAGACATGTaGAGCCTCCAATCTTATCCA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSACTDM*SLQSYP
Trigger: TGGATAAGATTGGAGGCTTCACATGTCTGTGCATGC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTAACCATTCACACCGTTaGTACATGTTGCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVNHSHR*YMLHPC
Trigger: GCAAGGGTGCAACATGTATCAACGGTGTGAATGGTT...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTAAATTGCCAAGAGCATaGATACAGAGAGTGGATTCA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIKLPRA*IQRVDS
Trigger: TGAATCCACTCTCTGTATTCATGCTCTTGGCAATTT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGAGTGCTCAGTTTTGTaGTGTTTCCTATTTGACAGA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIECSVL*CFLFDR
Trigger: TCTGTCAAATAGGAAACATCACAAAACTGAGCACTC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCTCATGTGGGAAGACTTaGAAAATAATACCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSSCGKT*KIIPGP
Trigger: GGGACCAGGTATTATTTTTCAAGTCTTCCCACATGA...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR GCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAACATCCACATCCTCTGTaGAGAACTGTCCTGTCCATT +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKHPHPL*RTVLSI
Trigger: AATGGACAGGACAGTTCTGCACAGAGGATGTGGATG...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579475.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAACACATTTTCCTGCATaGTCACAAGGATTGCTATTG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVTHFPA*SQGLLL
Trigger: CAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTGTTCACACAAGGGTTaGTCTGACATTCATTTATTT +
Preference number: 4 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQCSHKG*SDIHLF
Trigger: AAATAAATGAATGTCAGAGCAACCCTTGTGTGAACA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACACTTTATCCACACACTaGCCATTGTTCACACAAGGG +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYTLSTH*PLFTQG
Trigger: CCCTTGTGTGAACAATGGGCAGTGTGTGGATAAAGT...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGTGATCGATACACTTTaGCCCATTCAGACACGGAGT +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTVIDTL*PIQTRS
Trigger: ACTCCGTGTCTGAATGGGGCAAAGTGTATCGATCAC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCATCAATGTTACATCTCTaGCCTGTGAATCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPSMLHL*PVNPGE
Trigger: CTCACCAGGATTCACAGGGCAGAGATGTAACATTGA...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTACCGTTGATACATGTTaGACCCTTGCGACAGGGATT +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTITVDTC*TLATGI
Trigger: AATCCCTGTCGCAAGGGTGCAACATGTATCAACGGT...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCAGAGACCATGGTTCATaGAGGGCTTGGAGATACACT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSRDHGS*RAWRYT
Trigger: AGTGTATCTCCAAGCCCTGCATGAACCATGGTCTCT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACACGCTTGTGATTGCTTaGATCTCGGCGAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHTLVIA*ISAKSE
Trigger: TTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGT...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTCAACAACAAAAGAGTTaGCTCCACATTATTGACAGC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIQQQKS*LHIIDS
Trigger: GCTGTCAATAATGTGGAGGCAACTCTTTTGTTGTTG...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCACAATCACGGAGAGGTaGAAAACCAAAAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFTITER*KTKSTK
Trigger: TTTGGTGCTTTTGGTTTTGCACCTCTCCGTGATTGT...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCAGTTTCTACGTTAGTTaGCAAAGGGAATGTCATGGC +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFSFYVS*QRECHG
Trigger: GCCATGACATTCCCTTTGGCAACTAACGTAGAAACT...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGCTCCCTTCAAAACCTaGAAGGCAGTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSAPFKT*KAVALK
Trigger: TTTGAGTGCAACTGCCTTCCAGGTTTTGAAGGGAGC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAAGCTCCCTTCAAAACCTaGAAGGCAGTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKAPFKT*KAVALK
Trigger: TTTGAGTGCAACTGCCTTCCAGGTTTTGAAGGGAGC...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579475.7
CDS-3UTR CCA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACACACACCTTTGAAACCTaGCATGCACAGACATGTGAA +
Preference number: 4 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTHTFET*HAQTCE
Trigger: TTCACATGTCTGTGCATGCCAGGTTTCAAAGGTGTG...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTTCATCAATATCAATCTaGCAAACTGGCCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKISSISI*QTGPVK
Trigger: TTTCACTGGGCCAGTTTGCCAGATTGATATTGATGA...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCTCCATACAGATTCCATaGATACAAGGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPASIQIP*IQGLLA
Trigger: TGCAAGTAACCCTTGTATCCATGGAATCTGTATGGA...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATTCCTCCATTCTGGCATaGATTCGAAAGGCATTCATT +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHSSILA*IRKAFI
Trigger: AATGAATGCCTTTCGAATCCATGCCAGAATGGAGGA...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCTCATTCATGTCTGTCTaGCACTTATCCCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFSFMSV*HLSPVK
Trigger: TTTCACTGGGGATAAGTGCCAGACAGACATGAATGA...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTGACACTTATATCCACTaGGACCTCCAGTACAGTTTC +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIDTYIH*DLQYSF
Trigger: GAAACTGTACTGGAGGTCTCAGTGGATATAAGTGTC...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGTTCAGGCATGGATTTaGGGCACATTCATCAATATT +
Preference number: 4 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFVQAWI*GTFINI
Trigger: AATATTGATGAATGTGCCTCAAATCCATGCCTGAAC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGGAGCCAATACTGTCTaGCAATTCTTGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSGANTV*QFLPVY
Trigger: ATACACAGGCAAGAATTGTCAGACAGTATTGGCTCC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACATCACACTGGTTGTTaGTATAATCCCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTHHTGC*YNPSRE
Trigger: TTCCCTGCTGGGATTATATCAACAACCAGTGTGATG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTTATTCCTCTCACAGGTaGTCCCTTCAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVYSSHR*SLQNLE
Trigger: TTCCAGGTTTTGAAGGGAGCACCTGTGAGAGGAATA...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579475.7
CDS-3UTR GCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATAGCCTTGTGGGCAGGTaGAAATATATTGCCCATTTA +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNSLVGR*KYIAHL
Trigger: TAAATGGGCAATATATTTGCACCTGCCCACAAGGCT...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAGTTCACACATTTTCCTaGATGCTCACAAGGATTGCT +
Preference number: 4 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTVHTFS*MLTRIA
Trigger: AGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAAC...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTATTTCTAATTCACAATaGACACCTTTGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: ENILGIPVTRTTRCERKIISNSQ*TPLKPG
Trigger: GCCAGGTTTCAAAGGTGTGCATTGTGAATTAGAAAT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAACGTTCAGGCAAGGGCTaGTGTAACATTCATCAATCT +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKRSGKG*CNIHQS
Trigger: AGATTGATGAATGTTACAGCAGCCCTTGCCTGAACG...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAATACAGTTTCCATGGATaGAGGGATTGCTCAGGCATT +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKYSFHG*RDCSGI
Trigger: AATGCCTGAGCAATCCCTGCATCCATGGAAACTGTA...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGATGCAGACACCTGAGTaGTGGCACAAGTGTTCAACA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVMQTPE*WHKCST
Trigger: TGTTGAACACTTGTGCCAGCACTCAGGTGTCTGCAT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAATAATCAATAAGCCTTaGAGATACCCAGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVIINKP*RYPVKL
Trigger: CAGTTTCACTGGGTATCTGCAAGGCTTATTGATTAT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACTTGAAGGGATCTCCTaGCCCCAAAATTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTLEGIS*PQNLLK
Trigger: CTTCAACAAATTTTGGGGGCAGGAGATCCCTTCAAG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCCACACCTTTGAAACCTaGCATGCACAGACATGTGAA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSHTFET*HAQTCE
Trigger: TTCACATGTCTGTGCATGCCAGGTTTCAAAGGTGTG...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATTCCATACAGATTCCATaGATACAAGGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHSIQIP*IQGLLA
Trigger: TGCAAGTAACCCTTGTATCCATGGAATCTGTATGGA...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCTCAAAGCAGGTTCCTTaGTTCAGGCATGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSSKQVP*FRHGFE
Trigger: CTCAAATCCATGCCTGAACCAAGGAACCTGCTTTGA...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTTCAAAGCAGGTTCCTTaGTTCAGGCATGGATTTGAG +
Preference number: 4 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVSKQVP*FRHGFE
Trigger: CTCAAATCCATGCCTGAACCAAGGAACCTGCTTTGA...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGAAGACGATCCATATaGTCTGTGATGTCTCGATTG +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGRRSI*SVMSRL
Trigger: CAATCGAGACATCACAGACCATATGGATCGTCTTCC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGAAAGGATGATAGGCTaGGAGAATGGTCTGAGCTAC +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVERMIG*ENGLSY
Trigger: GTAGCTCAGACCATTCTCCCAGCCTATCATCCTTTC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCTCCCAATCAAAATTCTTaGTTTTCAGCCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: SAPAACILFPIKILGFQPPNQNS*FSASSS
Trigger: TGATGAGGAGGCTGAAAACCAAGAATTTTGATTGGG...AGGCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
CDS-3UTR CCA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCATTTCTCACTGTTTCTaGAAGGCAGTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSISHCF*KAVALK
Trigger: TTTGAGTGCAACTGCCTTCCAGAAACAGTGAGAAAT...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652302.1
CDS-3UTR TCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATGTTCAGGCATGGATTTaGGGCACATTCATCAATATT +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNVQAWI*GTFINI
Trigger: AATATTGATGAATGTGCCTCAAATCCATGCCTGAAC...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACACTCTCAAAATTTGGTaGCTCTTTGCAAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHTLKIW*LFANSS
Trigger: GCTGCTGTTTGCAAAGAGTCACCAAATTTTGAGAGT...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR TCA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCAAACAAATGCAGGAGTaGAGACAGACGTATTTTAGT +
Preference number: 4 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSKQMQE*RQTYFS
Trigger: ACTAAAATACGTCTGTCTTCACTCCTGCATTTGTTT...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTATTCCTCTCACAGGTaGTCCCTTCAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVYSSHR*SLQNLE
Trigger: TTCCAGGTTTTGAAGGGAGCACCTGTGAGAGGAATA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAGCCTTGTGGGCAGGTaGAAATATATTGCCCATTTA +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTISLVGR*KYIAHL
Trigger: TAAATGGGCAATATATTTGCACCTGCCCACAAGGCT...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGTTCACACATTTTCCTaGATGCTCACAAGGATTGCT +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTVHTFS*MLTRIA
Trigger: AGCAATCCTTGTGAGCATGCAGGAAAATGTGTGAAC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATATTTCTAATTCACAATaGACACCTTTGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHISNSQ*TPLKPG
Trigger: GCCAGGTTTCAAAGGTGTGCATTGTGAATTAGAAAT...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCATTATTGACAGCAGCTaGCCAGTGAAGAGCAGATTT +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSIIDSS*PVKSRF
Trigger: AAATCTGCTCTTCACTGGGCAGCTGCTGTCAATAAT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAATTCAATAAGAGGATaGAATGGATTTGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGNSIRG*NGFEHH
Trigger: GTGATGCTCAAATCCATTGCATCCTCTTATTGAATT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAAGATTGCTATTGGCCATaGCACATTCATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKDCYWP*HIHPHL
Trigger: AAGATGTGGATGAATGTGCCATGGCCAATAGCAATC...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTCATCAATATCAATCTaGCAAACTGGCCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNSSISI*QTGPVK
Trigger: TTTCACTGGGCCAGTTTGCCAGATTGATATTGATGA...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCAAGTTCCTCCATTCTaGCATGGATTCGAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVQVPPF*HGFERH
Trigger: ATGCCTTTCGAATCCATGCCAGAATGGAGGAACTTG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAATGTTGTTCTCACAATaGACTCCATCAAATCCTGCC +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTMLFSQ*TPSNPA
Trigger: GGCAGGATTTGATGGAGTCCATTGTGAGAACAACAT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTAAGAAACAAGCAATTTaGTCTGACATTGTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: NILGIPVTRTTRCERKIGKKQAI*SDIVLK
Trigger: CTTAAGCACAATGTCAGACCAAATTGCTTGTTTCTT...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAAACACTGCCAGGCCATaGATGCAGTATTGGAAAATA +
Preference number: 4 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTNTARP*MQYWKI
Trigger: TATTTTCCAATACTGCATCCATGGCCTGGCAGTGTT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp CAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTAAACATCATCTATGTGCCTaGTTCCAGCCACATACAATT +
Preference number: 4 (lower is better)
Translates to: QMIDNHHLCAWFQPHTIKHHLCA*FQPHTI
Trigger: AATTGTATGTGGCTGGAACCAGGCACATAGATGATG...TTTAATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR TCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTGTCTTCTGTGGATATaGAAGGAAAGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVCLLWI*KERLNS
Trigger: ACTGTTGAGCCTTTCCTTTCATATCCACAGAAGACA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTACACATTTTCCTGCATaGTCACAAGGATTGCTATTG +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTITHFPA*SQGLLL
Trigger: CAATAGCAATCCTTGTGAGCATGCAGGAAAATGTGT...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACATTTCTAATTCACAATaGACACCTTTGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYISNSQ*TPLKPG
Trigger: GCCAGGTTTCAAAGGTGTGCATTGTGAATTAGAAAT...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR GCA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATTGTTCACACAAGGGTTaGTCTGACATTCATTTATTT +
Preference number: 4 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHCSHKG*SDIHLF
Trigger: AAATAAATGAATGTCAGAGCAACCCTTGTGTGAACA...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGATTGCTATTGGCCATaGCACATTCATCCACATCTT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVDCYWP*HIHPHL
Trigger: AAGATGTGGATGAATGTGCCATGGCCAATAGCAATC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTTCAGACACGGAGTACTaGAACAGTCATCAATATCAA +
Preference number: 4 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTISDTEY*NSHQYQ
Trigger: TTGATATTGATGACTGTTCCAGTACTCCGTGTCTGA...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CCA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCAAGAGCACTTGAAATaGTTCACAAGGTCAATACAG +
Preference number: 4 (lower is better)
Translates to: INGSKGRESPFRMIKCLHQEHLK*FTRSIQ
Trigger: CTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTGTAGAATCTTCTCATaGATATGGCAGAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVCRIFS*IWQKPA
Trigger: TGCAGGCTTCTGCCATATCCATGAGAAGATTCTACA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACTCTTCTCACTGTTTCTaGAAGGCAGTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYSSHCF*KAVALK
Trigger: TTTGAGTGCAACTGCCTTCCAGAAACAGTGAGAAGA...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR CCA 90 bp TCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCTCTGTTTGTAGGTGTTTaGGTTACATCAGTAAACAAA +
Preference number: 4 (lower is better)
Translates to: SAPAACILFPIKILGFQPLFVGV*VTSVNK
Trigger: TTTGTTTACTGATGTAACCCAAACACCTACAAACAG...AGGCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGAGTATTTGTCATACTTaGATGTCTTGCTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVSICHT*MSCCSP
Trigger: AGGGGAACAGCAAGACATGCAAGTATGACAAATACT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTGGTTGTCTTTGAAGTaGTCTGCACAGTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVWLSLK*SAQYLS
Trigger: TGACAAATACTGTGCAGACCACTTCAAAGACAACCA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACCCCAATCAAAATTCTTaGTTTTCAGCCTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYPNQNS*FSASSS
Trigger: TGATGAGGAGGCTGAAAACCAAGAATTTTGATTGGG...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR TCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACATTTTTATAAGGAGTTaGATGAATTGGCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYIFIRS*MNWPGL
Trigger: CAAGCCTGGCCAATTCATTCAACTCCTTATAAAAAT...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGTTCCTATTTGACAGATaGTTTTTCCCCAGGATCATT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVFLFDR*FFPRII
Trigger: AATGATCCTGGGGAAAAAGCATCTGTCAAATAGGAA...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCTTATAGGGCTGTTTTaGATCATAGAAAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVLIGLF*IIENKS
Trigger: GGACTTGTTTTCTATGATCCAAAACAGCCCTATAAG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCATACATTCAATGTATTaGTTAGGGCCAAAATCCCTA +
Preference number: 4 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSIHSMY*LGPKSL
Trigger: TAGGGATTTTGGCCCTAACCAATACATTGAATGTAT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGATGCGGTCATTTTATTaGTTACTGGGTTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVMRSFY*LLGFSY
Trigger: GTATGAGAAACCCAGTAACCAATAAAATGACCGCAT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR GCA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGAAAATAGCAAAGGCTaGTATATAGTTCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVENSKG*YIVPPF
Trigger: AAAAGGAGGAACTATATAGCAGCCTTTGCTATTTTC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACTTAGCTGTACAACTTTaGGTGAATCACTTAACATCT +
Preference number: 4 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYLAVQL*VNHLTS
Trigger: AGATGTTAAGTGATTCACCCAAAGTTGTACAGCTAA...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR CCA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACAGAGGCAGTAGAATTTaGAAAAGACAGACAATAAAC +
Preference number: 4 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYRGSRI*KRQTIN
Trigger: GTTTATTGTCTGTCTTTTCCAAATTCTACTGCCTCT...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS GCA 90 bp CACACTGGCAGGAGTAATAAGGAGGCTGGCGCTGAGGGTGGCAGCTaGCCCCGTGCTGGCAGGGGCTACTGGCACAGCCTGACTCGCAGT +
Preference number: 5 (lower is better)
Translates to: HTGRSNKEAGAEGGS*PRAGRGYWHSLTRS
Trigger: ACTGCGAGTCAGGCTGTGCCAGTAGCCCCTGCCAGCACGGGGGCAGCTGCCACCCTCAGCGCCAGCCTCCTTATTACTCCTGCCAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GCCCAGGGGTTCTCCATGGTGAGAGAACAGTCACCCCCATCCCACTaGCAGGCATGGCTGTTGCAGGCCTCATCACAGACGCCATCCCGA +
Preference number: 5 (lower is better)
Translates to: AQGFSMVREQSPPSH*QAWLLQASSQTPSR
Trigger: TCGGGATGGCGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCCAGTGGGATGGGGGTGACTGTTCTCTCACCATGGAGAACCCCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp ACCATGAGTTCCCCCTGGGAGTCCCGCTTAATGCGCAGGTTGGTGTaGAGCAGGGTACCCAGTGCCCGCAAGAAGCTGCGAGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: TMSSPWESRLMRRLV*SRVPSARKKLRASW
Trigger: CCAGGATGCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCATTAAGCGGGACTCCCAGGGGGAACTCATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS CCA 90 bp CCTGCCCGTCCTGCTGGGGCATCATGGCAGTGGGGAAAGCCACACTaGGCAAACGGGCCATTTCTGGAATCTGGTACATGGTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PARPAGASWQWGKPH*ANGPFLESGTWWAG
Trigger: CCCTGCCCACCATGTACCAGATTCCAGAAATGGCCCGTTTGCCCAGTGTGGCTTTCCCCACTGCCATGATGCCCCAGCAGGACGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp GGAGTCCCGCTTAATGCGCAGGTTGGTGTGGAGCAGGGTACCCAGTaGCCGCAAGAAGCTGCGAGCATCCTGGAGCAGTTGTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GVPLNAQVGVEQGTQ*PQEAASILEQLFRW
Trigger: CCACCTGAACAACTGCTCCAGGATGCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCATTAAGCGGGACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS GCA 90 bp TGCCTGAGGAGGGGTGAGAGCCAGCGATGGTGTCCTACGGATGTCTaGAGCTTCAAGGTGCTGCTGTGTCCATGGCCGTCGATCAATGGG +
Preference number: 5 (lower is better)
Translates to: CLRRGESQRWCPTDV*SFKVLLCPWPSING
Trigger: CCCATTGATCGACGGCCATGGACACAGCAGCACCTTGAAGCTGCAGACATCCGTAGGACACCATCGCTGGCTCTCACCCCTCCTCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GGTACTTGCCCACAGAGGCTGGGAAAGGATGATAGGCTGGGAGAATaGTCTGAGCTACCTGCCCGTCCTGCTGGGGCATCATGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GTCPQRLGKDDRLGE*SELPARPAGASWQW
Trigger: CCACTGCCATGATGCCCCAGCAGGACGGGCAGGTAGCTCAGACCATTCTCCCAGCCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GGGTGTGGGGTACTTGCCCACAGAGGCTGGGAAAGGATGATAGGCTaGGAGAATGGTCTGAGCTACCTGCCCGTCCTGCTGGGGCATCAT +
Preference number: 5 (lower is better)
Translates to: GCGVLAHRGWERMIG*ENGLSYLPVLLGHH
Trigger: ATGATGCCCCAGCAGGACGGGCAGGTAGCTCAGACCATTCTCCCAGCCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAAGCACTGGACGGAAGTaGCAGTGTAGCCATGGACCA +
Preference number: 5 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHASTGRK*QCSHGP
Trigger: TGGTCCATGGCTACACTGCAACTTCCGTCCAGTGCT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp GCGTTCTGGAGTCAGGGATTCACTGACGACAGACACAAGAGGGTATaGCAGGGTCCCCTGTATGGCGTGAGAGGCCAGGAGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AFWSQGFTDDRHKRV*QGPLYGVRGQESCC
Trigger: GCAGCAGCTCTCCTGGCCTCTCACGCCATACAGGGGACCCTGTCATACCCTCTTGTGTCTGTCGTCAGTGAATCCCTGACTCCAGAACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp GGGCCACGGACATTCACATCTAACACATCCACCTCCTGCTCTGCCTaGGGAGGGGTGAGAGCCAGCGATGGTGTCCTACGGATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: GPRTFTSNTSTSCSA*GGVRASDGVLRMSA
Trigger: TGCAGACATCCGTAGGACACCATCGCTGGCTCTCACCCCTCCTCAGGCAGAGCAGGAGGTGGATGTGTTAGATGTGAATGTCCGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp CCCTTTACACCAGTGCCACTCACTGACGACAGACACAAGAGGGTATaGCAGGGTCCCCTGTATGGCGTGAGAGGCCAGGAGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PFTPVPLTDDRHKRV*QGPLYGVRGQESCC
Trigger: GCAGCAGCTCTCCTGGCCTCTCACGCCATACAGGGGACCCTGTCATACCCTCTTGTGTCTGTCGTCAGTGAGTGGCACTGGTGTAAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493703.1
CDS GCA 90 bp CCCCACAGCATCCTGTCCCACTGGCTCACGACGCTTGTGATTGCTTaGATCTCGGCGAAGAGTGAAACCTTCAGGCAGCCAGAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: PHSILSHWLTTLVIA*ISAKSETFRQPERA
Trigger: GGCTCTCTCTGGCTGCCTGAAGGTTTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTGAGCCAGTGGGACAGGATGCTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp CTGCTGGGACTGGGACTGGATGGAGCCTACTCAAGCTTCCAGCACTaGCACTGCCTGGAGACACAATGTGGTGGTGGGATAGCAACTGGC +
Preference number: 5 (lower is better)
Translates to: LLGLGLDGAYSSFQH*HCLETQCGGGIATG
Trigger: GCCAGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp TTCTCCATGGTGAGAGAACAGTCACCCCCATCCCACTGGCAGGCATaGCTGTTGCAGGCCTCATCACAGACGCCATCCCGAGCTTTGTCG +
Preference number: 5 (lower is better)
Translates to: FSMVREQSPPSHWQA*LLQASSQTPSRALS
Trigger: CGACAAAGCTCGGGATGGCGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCCAGTGGGATGGGGGTGACTGTTCTCTCACCATGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp CTCAAGCTTCCAGCACTGCCACTGCCTGGAGACACAATGTGGTGGTaGGATAGCAACTGGCTCACTGAGGGAAGCACAGTGCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LKLPALPLPGDTMWW*DSNWLTEGSTVLAP
Trigger: TGGGGCCAGCACTGTGCTTCCCTCAGTGAGCCAGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp GTGCTTCAGGCTGAGGAAAGATCTGTTGGGCCCACAGATGACAGGTaGGAGAGCAGAAGTCAACACGGTGCCTGGAGGGCTTGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: VLQAEERSVGPTDDR*ESRSQHGAWRAWGH
Trigger: GTGACCCCAAGCCCTCCAGGCACCGTGTTGACTTCTGCTCTCTCACCTGTCATCTGTGGGCCCAACAGATCTTTCCTCAGCCTGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp TCACCAGGGTCTGACAGTTTTTCCCAGTGTAGCCCAGGGGGCAGCTaGAGCGGTAGGTACCCAGGCCATCAACACACGTTCCCTCATTCA +
Preference number: 5 (lower is better)
Translates to: SPGSDSFSQCSPGGS*SGRYPGHQHTFPHS
Trigger: TGAATGAGGGAACGTGTGTTGATGGCCTGGGTACCTACCGCTGCAGCTGCCCCCTGGGCTACACTGGGAAAAACTGTCAGACCCTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp TGCGCAGGTTGGTGTGGAGCAGGGTACCCAGTGCCCGCAAGAAGCTaGGAGCATCCTGGAGCAGTTGTTCAGGTGGCATCAATACCACAA +
Preference number: 5 (lower is better)
Translates to: CAGWCGAGYPVPARS*EHPGAVVQVASIPQ
Trigger: TTGTGGTATTGATGCCACCTGAACAACTGCTCCAGGATGCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS GCA 90 bp GGACTGGGACTGGATGGAGCCTACTCAAGCTTCCAGCACTGCCACTaGCTGGAGACACAATGTGGTGGTGGGATAGCAACTGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: GLGLDGAYSSFQHCH*LETQCGGGIATGSL
Trigger: CAGTGAGCCAGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp GCTTCCCTTCAGGTGGCCTGCTCTGGGGAGCTATGCCAGGATGGGTaGCCTCAGCTGGAGCCAGGACCATACCAAACATCTCATTGTACT +
Preference number: 5 (lower is better)
Translates to: ASLQVACSGELCQDG*PQLEPGPYQTSHCT
Trigger: AGTACAATGAGATGTTTGGTATGGTCCTGGCTCCAGCTGAGGGCACCCATCCTGGCATAGCTCCCCAGAGCAGGCCACCTGAAGGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp ATGTGCTTCCCTTCAGGTGGCCTGCTCTGGGGAGCTATGCCAGGATaGGTGCCCTCAGCTGGAGCCAGGACCATACCAAACATCTCATTG +
Preference number: 5 (lower is better)
Translates to: MCFPSGGLLWGAMPG*VPSAGARTIPNISL
Trigger: CAATGAGATGTTTGGTATGGTCCTGGCTCCAGCTGAGGGCACCCATCCTGGCATAGCTCCCCAGAGCAGGCCACCTGAAGGGAAGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp CACTGGAGGTGGACTCTCTCACGCATAAACCTGCATGTTGTTGTGTaGTGGCTCAGACATGTGTGTCCCAGGTCCCCGCTGACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HWRWTLSRINLHVVV*WLRHVCPRSPLTSS
Trigger: GGAGGAGGTCAGCGGGGACCTGGGACACACATGTCTGAGCCACCACACAACAACATGCAGGTTTATGCGTGAGAGAGTCCACCTCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp AGCCTACTCAAGCTTCCAGCACTGCCACTGCCTGGAGACACAATGTaGTGGTGGGATAGCAACTGGCTCACTGAGGGAAGCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: SLLKLPALPLPGDTM*WWDSNWLTEGSTVL
Trigger: CAGCACTGTGCTTCCCTCAGTGAGCCAGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp TTCACCTCCATGCGGTTCATCCAATCTGCTGGGACTGGGACTGGATaGAGCCTACTCAAGCTTCCAGCACTGCCACTGCCTGGAGACACA +
Preference number: 5 (lower is better)
Translates to: FTSMRFIQSAGTGTG*SLLKLPALPLPGDT
Trigger: TGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp CTCATTCACCTCCATGCGGTTCATCCAATCTGCTGGGACTGGGACTaGATGGAGCCTACTCAAGCTTCCAGCACTGCCACTGCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LIHLHAVHPICWDWD*MEPTQASSTATAWR
Trigger: TCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCGCATCCAGGAGACGCTaGGCAGCATCAGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLASRRR*AASARE
Trigger: CTCACGGGCTGATGCTGCCAAGCGTCTCCTGGATGC...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp CAAACAGGCACTCGACCGTGTTGCACAGCTCATCACACTGGTTGTTaGTATAATCCCAGCAGGGAAGTGGGGAGGAGCAGTTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QTGTRPCCTAHHTGC*YNPSREVGRSSWPR
Trigger: CCTGGGCCAACTGCTCCTCCCCACTTCCCTGCTGGGATTATATCAACAACCAGTGTGATGAGCTGTGCAACACGGTCGAGTGCCTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp TTTTTCAGCCCCACAGCATCCTGTCCCACTGGCTCACGACGCTTGTaGTTGCTTGCATCTCGGCGAAGAGTGAAACCTTCAGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: FFSPTASCPTGSRRL*LLASRRRVKPSGSQ
Trigger: CTGGCTGCCTGAAGGTTTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTGAGCCAGTGGGACAGGATGCTGTGGGGCTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp CATTCACATCTAACACATCCACCTCCTGCTCTGCCTGAGGAGGGGTaGGAGCCAGCGATGGTGTCCTACGGATGTCTGCAGCTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: HSHLTHPPPALPEEG*EPAMVSYGCLQLQG
Trigger: ACCTTGAAGCTGCAGACATCCGTAGGACACCATCGCTGGCTCTCACCCCTCCTCAGGCAGAGCAGGAGGTGGATGTGTTAGATGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp AGAGCCAGCGATGGTGTCCTACGGATGTCTGCAGCTTCAAGGTGCTaGTGTGTCCATGGCCGTCGATCAATGGGGTCATCTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: RASDGVLRMSAASRC*CVHGRRSMGSSSSE
Trigger: CTCAGAAGAAGATGACCCCATTGATCGACGGCCATGGACACAGCAGCACCTTGAAGCTGCAGACATCCGTAGGACACCATCGCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp GTACTCTTGGCACTGGGCCGTCTAGACTTCTTGCCCATTGGGGTGTaGTTCAGGCTGAGGAAAGATCTGTTGGGCCCACAGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: VLLALGRLDFLPIGV*FRLRKDLLGPQMTG
Trigger: ACCTGTCATCTGTGGGCCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp ATGTTACTGGCCACAGCACAAGTCCCTCCATTCAGGCAGGGCATCTaGGGACACACATCGACGAAGGTTTCACAGTGCCGGCCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: MLLATAQVPPFRQGI*GHTSTKVSQCRPVK
Trigger: CTTTACTGGCCGGCACTGTGAAACCTTCGTCGATGTGTGTCCCCAGATGCCCTGCCTGAATGGAGGGACTTGTGCTGTGGCCAGTAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GGGCTTGGGGTCACATTGTATTCATCCAGAAGGCGCACAATGTCATaGTGCATGCGATCCCGAGCCACATCCCGGGGAAGACGATCCATA +
Preference number: 5 (lower is better)
Translates to: GLGVTLYSSRRRTMS*CMRSRATSRGRRSI
Trigger: TATGGATCGTCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACAATGTGACCCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp AGGCATGGTACTCTTGGCACTGGGCCGTCTAGACTTCTTGCCCATTaGGGTGTGCTTCAGGCTGAGGAAAGATCTGTTGGGCCCACAGAT +
Preference number: 5 (lower is better)
Translates to: RHGTLGTGPSRLLAH*GVLQAEERSVGPTD
Trigger: ATCTGTGGGCCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGTACCATGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCACCTTTAAAGCCCTTCTaGCAAGTACACCTGTATCCA +
Preference number: 5 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAPLKPF*QVHLYP
Trigger: TGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGG...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCAAGATCAGTTACTCGGTaGCGAATCAGAATCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHARSVTR*RIRIWK
Trigger: CTTCCAGATTCTGATTCGCAACCGAGTAACTGATCT...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp CCACTGGCTCACGACGCTTGTGATTGCTTGCATCTCGGCGAAGAGTaGAACCTTCAGGCAGCCAGAGAGAGCCATGCTTACGCTTTCGTT +
Preference number: 5 (lower is better)
Translates to: PLAHDACDCLHLGEE*NLQAARESHAYAFV
Trigger: AACGAAAGCGTAAGCATGGCTCTCTCTGGCTGCCTGAAGGTTTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTGAGCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp GGGTCACATTGTATTCATCCAGAAGGCGCACAATGTCATGGTGCATaGGATCCCGAGCCACATCCCGGGGAAGACGATCCATATGGTCTG +
Preference number: 5 (lower is better)
Translates to: GSHCIHPEGAQCHGA*DPEPHPGEDDPYGL
Trigger: CAGACCATATGGATCGTCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACAATGTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp CTTGGGGTCACATTGTATTCATCCAGAAGGCGCACAATGTCATGGTaGATGCGATCCCGAGCCACATCCCGGGGAAGACGATCCATATGG +
Preference number: 5 (lower is better)
Translates to: LGVTLYSSRRRTMSW*MRSRATSRGRRSIW
Trigger: CCATATGGATCGTCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACAATGTGACCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp CAACAAGCACACCTCTCCTGGAGGCTGCTATGTCACAAGAGACATTaGGCACGTCACAATAGGCACCAGCCCATCCAGATGGACATAGGC +
Preference number: 5 (lower is better)
Translates to: QQAHLSWRLLCHKRH*ARHNRHQPIQMDIG
Trigger: GCCTATGTCCATCTGGATGGGCTGGTGCCTATTGTGACGTGCCCAATGTCTCTTGTGACATAGCAGCCTCCAGGAGAGGTGTGCTTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GCACAGCTCATCACACTGGTTGTTGATATAATCCCAGCAGGGAAGTaGGGAGGAGCAGTTGGCCCAGGGGTTCTCCATGGTGAGAGAACA +
Preference number: 5 (lower is better)
Translates to: AQLITLVVDIIPAGK*GGAVGPGVLHGERT
Trigger: TGTTCTCTCACCATGGAGAACCCCTGGGCCAACTGCTCCTCCCCACTTCCCTGCTGGGATTATATCAACAACCAGTGTGATGAGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp ATTGTACTGGGTCTCATTCACCTCCATGCGGTTCATCCAATCTGCTaGGACTGGGACTGGATGGAGCCTACTCAAGCTTCCAGCACTGCC +
Preference number: 5 (lower is better)
Translates to: IVLGLIHLHAVHPIC*DWDWMEPTQASSTA
Trigger: GGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAGACCCAGTACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GGAGCAGGAGGGCAGAAAGGGGCAGGTACGCTGTGGTCCACAGAGGTCCATGCATGGTCTGCACAGTATTaGTCATACTTGCATGTCTTG +
Preference number: 5 (lower is better)
Translates to: GAGGQKGAGTLWSTEVHAWSAQY*SYLHVL
Trigger: CAAGACATGCAAGTATGACAAATACTGTGCAGACCA...TGCATGGACCTCTGTGGACCACAGCGTACCTGCCCCTTTCTGCCCTCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp CAGTATAGCCCAGGGGGCACTGACAGTAATGCGTGTTGCCAGCATTaGTGCAGACACCTGAGTGCTGGCACAAGTGTTCAACAAGCACAC +
Preference number: 5 (lower is better)
Translates to: QYSPGGTDSNACCQH*CRHLSAGTSVQQAH
Trigger: GTGTGCTTGTTGAACACTTGTGCCAGCACTCAGGTGTCTGCATCAATGCTGGCAACACGCATTACTGTCAGTGCCCCCTGGGCTATACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp GTATGGCGTGAGAGGCCAGGAGAGCTGCTGCTGCATCCGTGTTCTTaGAGCAGTGGTCTGAGTCTTGAACACACTGGCGGTTGTCAATTT +
Preference number: 5 (lower is better)
Translates to: VWRERPGELLLHPCS*SSGLSLEHTGGCQF
Trigger: AAATTGACAACCGCCAGTGTGTTCAAGACTCAGACCACTGCTTCAAGAACACGGATGCAGCAGCAGCTCTCCTGGCCTCTCACGCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS GCA 90 bp CTCATTGTACTGGGTCTCATTCACCTCCATGCGGTTCATCCAATCTaGTGGGACTGGGACTGGATGGAGCCTACTCAAGCTTCCAGCACT +
Preference number: 5 (lower is better)
Translates to: LIVLGLIHLHAVHPI*WDWDWMEPTQASST
Trigger: AGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAGACCCAGTACAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp CATTTGAGGAAGCATAACTGTGCTGTGAAGGGGGTGTGGGGTACTTaGCCACAGAGGCTGGGAAAGGATGATAGGCTGGGAGAATGGTCT +
Preference number: 5 (lower is better)
Translates to: HLRKHNCAVKGVWGT*PQRLGKDDRLGEWS
Trigger: AGACCATTCTCCCAGCCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCACAGCACAGTTATGCTTCCTCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GCGGTAGGTACCCAGGCCATCAACACACGTTCCCTCATTCAGGCATaGATGAGAGCTGCATTCATTGATCTCATGGAGGCAGAAGGATCC +
Preference number: 5 (lower is better)
Translates to: AVGTQAINTRSLIQA*MRAAFIDLMEAEGS
Trigger: GGATCCTTCTGCCTCCATGAGATCAATGAATGCAGCTCTCATCCATGCCTGAATGAGGGAACGTGTGTTGATGGCCTGGGTACCTACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp GTGCCCTCAGCTGGAGCCAGGACCATACCAAACATCTCATTGTACTaGGTCTCATTCACCTCCATGCGGTTCATCCAATCTGCTGGGACT +
Preference number: 5 (lower is better)
Translates to: VPSAGARTIPNISLY*VSFTSMRFIQSAGT
Trigger: AGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAGACCCAGTACAATGAGATGTTTGGTATGGTCCTGGCTCCAGCTGAGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTCCATGGATGCAGGGATTGCTCAGGCATTCGTTCACCTGTGAGTAGCAGCTGGTTGTCCACTTCACAGTaGATGCCAACCCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: FHGCRDCSGIRSPVSSSWLSTSQ*MPTQPA
Trigger: TGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAA...CCAGCTGCTACTCACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGGGAGCCCCCGCTGGTaGGGCAATACTGCCTTTAGG +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKGSPRW*GNTAFR
Trigger: CCTAAAGGCAGTATTGCCCAACCAGCGGGGGCTCCC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp TGCGATCCCGAGCCACATCCCGGGGAAGACGATCCATATGGTCTGTaGTGTCTCGATTGGCAAAATGGTCTAACAGGATCTTGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: CDPEPHPGEDDPYGL*CLDWQNGLTGSWLL
Trigger: AAGCAGCCAAGATCCTGTTAGACCATTTTGCCAATCGAGACATCACAGACCATATGGATCGTCTTCCCCGGGATGTGGCTCGGGATCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp TGGTGCATGCGATCCCGAGCCACATCCCGGGGAAGACGATCCATATaGTCTGTGATGTCTCGATTGGCAAAATGGTCTAACAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: WCMRSRATSRGRRSI*SVMSRLAKWSNRIL
Trigger: CAAGATCCTGTTAGACCATTTTGCCAATCGAGACATCACAGACCATATGGATCGTCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTTCACAATGCACACCTTaGAAACCTGGCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: WLAVALVAIDQVNAATIVSQCTP*KPGMHR
Trigger: TCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTGA...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATGGCAGGCATGGCTGTaGCAGGCCTCATCACAGACG +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKWQAWL*QASSQT
Trigger: CGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCCA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGTAGGCATGGTACTCTaGGCACTGGGCCGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTVGMVL*ALGRLD
Trigger: GTCTAGACGGCCCAGTGCCAAGAGTACCATGCCTAC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp ACCAGGAAGGGATCTGCGTGTCATCCTCTGTTTCTTCATAGCAGCTaGCTTCTCACCATAATAGGGGTACACCATGAGTTCCCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: TRKGSACHPLFLHSS*LLTIIGVHHEFPLG
Trigger: TCCCAGGGGGAACTCATGGTGTACCCCTATTATGGTGAGAAGTCAGCTGCTATGAAGAAACAGAGGATGACACGCAGATCCCTTCCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS GCA 90 bp CTTCTCACTCAGAGACTTCTTCCTCCTACTACCCTTGGCATCCTTTaGCTCCTTGGCAAGGTTAGGGAGGCTAGTAGGCATGGTACTCTT +
Preference number: 5 (lower is better)
Translates to: LLTQRLLPPTTLGIL*LLGKVREASRHGTL
Trigger: AAGAGTACCATGCCTACTAGCCTCCCTAACCTTGCCAAGGAGGCAAAGGATGCCAAGGGTAGTAGGAGGAAGAAGTCTCTGAGTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp CCTCCATTCTTACAGGGTTCACTCAGACACTCATTCATGTCTGTCTaGCACTTATCCCCAGTGAAACCCGGAAGGCAGAGGCAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: PPFLQGSLRHSFMSV*HLSPVKPGRQRQEK
Trigger: TTTCTCCTGCCTCTGCCTTCCGGGTTTCACTGGGGATAAGTGCCAGACAGACATGAATGAGTGTCTGAGTGAACCCTGTAAGAATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TGGCTGGCAGTTGCACTGGTAGCCATTGACCAGGTCAATGCAGCGACCATCGTTAAACCATTCACACCGTaGATACATGTTGCACCCTTG +
Preference number: 5 (lower is better)
Translates to: WLAVALVAIDQVNAATIVKPFTP*IHVAPL
Trigger: CAAGGGTGCAACATGTATCAACGGTGTGAATGGTTT...AACGATGGTCGCTGCATTGACCTGGTCAATGGCTACCAGTGCAACTGCCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTACCATGGATGCAGGGATaGCTCAGGCATTCGTTCACC +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLPWMQG*LRHSFT
Trigger: GGTGAACGAATGCCTGAGCAATCCCTGCATCCATGG...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGGTACACCGCTGACCTaGCCAGCCAGGAGCACACAA +
Preference number: 5 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVGTPLT*PARSTQ
Trigger: TTGTGTGCTCCTGGCTGGCAAGGTCAGCGGTGTACC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCAGTGGGGAGGAGCAGTaGGCCCAGGGGTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFSGEEQ*AQGFSM
Trigger: CATGGAGAACCCCTGGGCCAACTGCTCCTCCCCACT...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGGCACTCGACCGTGTaGCACAGCTCATCACACTGG +
Preference number: 5 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSRHSTV*HSSSHW
Trigger: CCAGTGTGATGAGCTGTGCAACACGGTCGAGTGCCT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGGGCTTGGGGTCACATaGTATTCATCCAGAAGGCGC +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQGLGVT*YSSRRR
Trigger: GCGCCTTCTGGATGAATACAATGTGACCCCAAGCCC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGGGGGTGTGGGGTACTaGCCCACAGAGGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFGGVGY*PTEAGK
Trigger: TTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCAGTCAATGGAATGCTaGGCAGGAAGTAGGGGGACC +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQQSMEC*AGSRGT
Trigger: GGTCCCCCTACTTCCTGCCAAGCATTCCATTGACTG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCCATTGGAAGGCACCTaGTCCCTGAGCAACCATCTG +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQPLEGT*SLSNHL
Trigger: CAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CCTGAGCAACCATCTGTTTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCTACTTCGCATTTCCATaGGAAGGCACCTTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PEQPSVCHQLWLVHRRVLYFAFP*EGTLSL
Trigger: CAGGGACAAGGTGCCTTCCAATGGAAATGCGAAGTA...GAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAAACAGATGGTTGCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp GCATCTCGGCGAAGAGTGAAACCTTCAGGCAGCCAGAGAGAGCCATaGTTACGCTTTCGTTTTGCCATGATTACCCCCAGCAGAATAATA +
Preference number: 5 (lower is better)
Translates to: ASRRRVKPSGSQREP*LRFRFAMITPSRII
Trigger: TATTATTCTGCTGGGGGTAATCATGGCAAAACGAAAGCGTAAGCATGGCTCTCTCTGGCTGCCTGAAGGTTTCACTCTTCGCCGAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp CACTCCTCACTGTTGCACCCCTGGTCACAGTGGTTGTCTTTGAAGTaGTCTGCACAGTATTTGTCATACTTGCATGTCTTGCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: HSSLLHPWSQWLSLK*SAQYLSYLHVLLFP
Trigger: GGGGAACAGCAAGACATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CCATGTACCCGGGATTGCAGATGCAGGTGTAGGAATCAATACCATCCTGACACTGCATGCTCACAAGGATaGCTATTGGCCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: PCTRDCRCRCRNQYHPDTACSQG*LLAMAH
Trigger: ATGTGCCATGGCCAATAGCAATCCTTGTGAGCATGC...AGTGTCAGGATGGTATTGATTCCTACACCTGCATCTGCAATCCCGGGTACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCCACACACTGCCCATaGTTCACACAAGGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSTHCP*FTQGLL
Trigger: GAGCAACCCTTGTGTGAACAATGGGCAGTGTGTGGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTCCATGGATGCAGGGATTGCTCAGGCATTCGTTCACCTGTGAGTAGCAGCTGGCCTTTAAAGCCCTTCTaGCAAGTACACCTGTATCCA +
Preference number: 5 (lower is better)
Translates to: FHGCRDCSGIRSPVSSSWPLKPF*QVHLYP
Trigger: TGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGG...CCAGCTGCTACTCACAGGTGAACGAATGCCTGAGCAATCCCTGCATCCATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAGCTGCATCCGTGTTCTaGAAGCAGTGGTCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTAASVF*KQWSES
Trigger: AGACTCAGACCACTGCTTCAAGAACACGGATGCAGC...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAAATCTGGAAGACACCTaGGGCATCAGCTGCCACTGC +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKNLEDT*GISCHC
Trigger: GCAGTGGCAGCTGATGCCCAAGGTGTCTTCCAGATT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGGTGTCTCTTCCTTGTaGTCCTGCATGTCTCGGTTG +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQGVSSL*SCMSRL
Trigger: CAACCGAGACATGCAGGACAACAAGGAAGAGACACC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGCTGAGGAAAGATCTGTaGGGCCCACAGATGACAGGT +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQLRKDL*GPQMTG
Trigger: ACCTGTCATCTGTGGGCCCAACAGATCTTTCCTCAG...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATTCCTCCTACTACCCTaGGCATCCTTTGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLFLLLP*ASFASL
Trigger: CAAGGAGGCAAAGGATGCCAAGGGTAGTAGGAGGAA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTTTAAGGTGCAGCCTCTaGAAGGGATCTCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGLRCSL*KGSPAP
Trigger: GGGGGCAGGAGATCCCTTCAAGAGGCTGCACCTTAA...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp TGGTCTGCACAGTATTTGTCATACTTGCATGTCTTGCTGTTCCCCTaGCATTCAAAGTTGTCAAACAGGCACTCGACCGTGTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: WSAQYLSYLHVLLFP*HSKLSNRHSTVLHS
Trigger: GCTGTGCAACACGGTCGAGTGCCTGTTTGACAACTTTGAATGCCAGGGGAACAGCAAGACATGCAAGTATGACAAATACTGTGCAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ACATGTGAAGCCTCCAATCTTATCCAGACAGGTAGCATCATTCTGGCAGGGGTCAGGCACTGGAAACGATaGACTTTATCCACACACTGC +
Preference number: 5 (lower is better)
Translates to: TCEASNLIQTGSIILAGVRHWKR*TLSTHC
Trigger: GCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCCT...GACCCCTGCCAGAATGATGCTACCTGTCTGGATAAGATTGGAGGCTTCACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAATACATGTTGCACCCTaGCGACAGGGATTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKIHVAP*RQGLEA
Trigger: TGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTAT...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACATGGTTCATGCAGGGCTaGGAGATACACTCGTCAATG +
Preference number: 5 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTWFMQG*EIHSSM
Trigger: CATTGACGAGTGTATCTCCAAGCCCTGCATGAACCA...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTACCATTCTGGCAAGGATaGGCAAGGCAGTCATCAATG +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLPFWQG*ARQSSM
Trigger: CATTGATGACTGCCTTGCCAATCCTTGCCAGAATGG...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGAGCTGCTCTGGCACCTaGCCCCGGAAAATCCCGGGG +
Preference number: 5 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVSCSGT*PRKIPG
Trigger: CCCCGGGATTTTCCGGGGCAAGGTGCCAGAGCAGCT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGGCCGTCTAGACTTCTaGCCCATTGGGGTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFGRLDF*PIGVCF
Trigger: GAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGCATCCTTTGCCTCCTaGGCAAGGTTAGGGAGGCTA +
Preference number: 5 (lower is better)
Translates to: ENILGIPVTRTTRCERKIASFAS*ARLGRL
Trigger: TAGCCTCCCTAACCTTGCCAAGGAGGCAAAGGATGC...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp AACCACACTCCTCACTGTTGCACCCCTGGTCACAGTGGTTGTCTTTaGAGTGGTCTGCACAGTATTTGTCATACTTGCATGTCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: NHTPHCCTPGHSGCL*SGLHSICHTCMSCC
Trigger: ACAGCAAGACATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGAGTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACAAAGCCTTCTGGACATTaGCAGTATCCTGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTKPSGH*QYPVPL
Trigger: CAATGGCACAGGATACTGCAAATGTCCAGAAGGCTT...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGCATGCTCACAAGGATaGCTATTGGCCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKACSQG*LLAMAH
Trigger: ATGTGCCATGGCCAATAGCAATCCTTGTGAGCATGC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCATCCACACACTGCCCATaGTTCACACAAGGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPSTHCP*FTQGLL
Trigger: GAGCAACCCTTGTGTGAACAATGGGCAGTGTGTGGA...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCTCCACACACTGCCCATaGTTCACACAAGGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPASTHCP*FTQGLL
Trigger: GAGCAACCCTTGTGTGAACAATGGGCAGTGTGTGGA...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCATACATGTTGCACCCTaGCGACAGGGATTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPAIHVAP*RQGLEA
Trigger: TGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTAT...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTTTGTCCACTTCACAGTaGATGCCAACCCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGLSTSQ*MPTQPA
Trigger: TGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAA...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCTTGTCCACTTCACAGTaGATGCCAACCCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: SWKHSNDRQPSSMCLVPALSTSQ*MPTQPA
Trigger: TGCAGGCTGGGTTGGCATCAACTGTGAAGTGGACAA...GGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCATACTTGCATGTCTaGCTGTTCCCCTGGCATTCA +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSYLHV*LFPWHS
Trigger: TGAATGCCAGGGGAACAGCAAGACATGCAAGTATGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGCATCCTGGAGCAGTaGTTCAGGTGGCATCAATAC +
Preference number: 5 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSSILEQ*FRWHQY
Trigger: GTATTGATGCCACCTGAACAACTGCTCCAGGATGCT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACACGCTTAATGCGCAGGTaGGTGTGGAGCAGGGTACCC +
Preference number: 5 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTRLMRR*VWSRVP
Trigger: GGGTACCCTGCTCCACACCAACCTGCGCATTAAGCG...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAAGCCACCTCCTGTTCTaGTTCACCAGGAAGGGATCT +
Preference number: 5 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVSHLLF*FTRKGS
Trigger: AGATCCCTTCCTGGTGAACAAGAACAGGAGGTGGCT...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTACGACCCAGTGTTCACTaGTTCCAGTACCAATTAGGT +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLRPSVH*FQYQLG
Trigger: ACCTAATTGGTACTGGAACAAGTGAACACTGGGTCG...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCCAGCCTTTACTTTCTTaGGCTGGGGCCCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSQPLLS*AGALHH
Trigger: ATGATGAAGGGCCCCAGCCAAAGAAAGTAAAGGCTG...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATTCGCTCAGCAGCATTaGAGGAAGCATAACTGTGCT +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLFAQQH*RKHNCA
Trigger: AGCACAGTTATGCTTCCTCAAATGCTGCTGAGCGAA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TGGGTGGGTAACTGGCTCTTGCACGAGTTAACTTGTCTCTTGGTCATTCCAACACCGGATGACCTTCATTaGTTCCTCAGCAGCATTTAC +
Preference number: 5 (lower is better)
Translates to: WVGNWLLHELTCLLVIPTPDDLH*FLSSIY
Trigger: GTAAATGCTGCTGAGGAACAAATGAAGGTCATCCGG...TGTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGGCAAGGGTACAACATTaGAGACAGTGTCTTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQARVQH*RQCLLW
Trigger: CCACAGAAGACACTGTCTCAAATGTTGTACCCTTGC...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 90 bp TCTAGGGAATCAACAGGGGATAAAGTTACTGAACTCTCAGACAGTTaGACCTTCTCACTCAGAGACTTCTTCCTCCTACTACCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SRESTGDKVTELSDS*TFSLRDFFLLLPLA
Trigger: TGCCAAGGGTAGTAGGAGGAAGAAGTCTCTGAGTGAGAAGGTCCAACTGTCTGAGAGTTCAGTAACTTTATCCCCTGTTGATTCCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATCACAAGGATTGCTATaGGCCATGGCACATTCATCC +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKSQGLL*AMAHSS
Trigger: GGATGAATGTGCCATGGCCAATAGCAATCCTTGTGA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCGGTGATCGATACACTTaGCCCCATTCAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFGDRYT*PHSDTE
Trigger: CTCCGTGTCTGAATGGGGCAAAGTGTATCGATCACC...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATCCATGGATGCAGGGATaGCTCAGGCATTCGTTCACC +
Preference number: 5 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNPWMQG*LRHSFT
Trigger: GGTGAACGAATGCCTGAGCAATCCCTGCATCCATGG...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCATTCTCACAAGGGTTaGGGGAACAGGGAGCCAATA +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGHSHKG*GNREPI
Trigger: TATTGGCTCCCTGTTCCCCAAACCCTTGTGAGAATG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACCGCACACTCATCGAGTaGCTCCTCACAGTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: INGSKGRESPFRMIKCLHRTLIE*LLTVAP
Trigger: GGGAGCTACTGTGAGGAGCAACTCGATGAGTGTGCG...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGGTGGGCAAGAGCACTaGAAATGGTTCACAAGGTCA +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGGGQEH*KWFTRS
Trigger: TGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCACGCCATCCCGAGCTTaGTCGGCACAATACTGGCTC +
Preference number: 5 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSTPSRA*SAQYWL
Trigger: GAGCCAGTATTGTGCCGACAAAGCTCGGGATGGCGT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCCCCTGGCATTCAAAGTaGTCAAACAGGCACTCGACC +
Preference number: 5 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFPWHSK*SNRHST
Trigger: GGTCGAGTGCCTGTTTGACAACTTTGAATGCCAGGG...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTCCATGCAGATAGGTTCTCCCCATCTGTGAATAATAAATGGGTCCAAGGGCAGTCTGTGATGTCTCGATaGGCAAAATGGTCTAACAGG +
Preference number: 5 (lower is better)
Translates to: VHADRFSPSVNNKWVQGQSVMSR*AKWSNR
Trigger: CCTGTTAGACCATTTTGCCAATCGAGACATCACAGA...CTGCCCTTGGACCCATTTATTATTCACAGATGGGGAGAACCTATCTGCATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTAGTGGGTAACTGGCTCTaGCACGAGTTAACTTGTCTC +
Preference number: 5 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVVGNWL*HELTCL
Trigger: GAGACAAGTTAACTCGTGCAAGAGCCAGTTACCCAC...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAGAGGCTGACAGAATGTaGCCACATGGAGAGAATAAA +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLEADRM*PHGENK
Trigger: TTTATTCTCTCCATGTGGCAACATTCTGTCAGCCTC...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAAGAGGATGCAATGGATTaGAGCATCACAGCCAATTGC +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKEDAMD*SITANC
Trigger: GCAATTGGCTGTGATGCTCAAATCCATTGCATCCTC...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GCCTTTAAAGCCCTTCTTGCAAGTACACCTGTATCCATTCACCAGATTGTCACAATGACTGTCCACCACTaGCATCTTAGGAGGCCACAA +
Preference number: 5 (lower is better)
Translates to: AFKALLASTPVSIHQIVTMTVHH*HLRRPQ
Trigger: TTGTGGCCTCCTAAGATGCAAGTGGTGGACAGTCAT...TGTGACAATCTGGTGAATGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS TCA 90 bp TTGCCAGCCAGGAGCACACAAGCAAGTATAACTCTCAAAATTTGGTaGCTCTTTGCAAACAGCAGCATTCTCACAAGGGTTTGGGGAACA +
Preference number: 5 (lower is better)
Translates to: LPARSTQASITLKIW*LFANSSILTRVWGT
Trigger: TGTTCCCCAAACCCTTGTGAGAATGCTGCTGTTTGCAAAGAGTCACCAAATTTTGAGAGTTATACTTGCTTGTGTGCTCCTGGCTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 90 bp GGGGATGTAATCATTGGAGAGGATGTGGTGTCGGAAACATACGTGTaGGGAGATTCTAGGGAATCAACAGGGGATAAAGTTACTGAACTC +
Preference number: 5 (lower is better)
Translates to: GDVIIGEDVVSETYV*GDSRESTGDKVTEL
Trigger: GAGTTCAGTAACTTTATCCCCTGTTGATTCCCTAGAATCTCCTCACACGTATGTTTCCGACACCACATCCTCTCCAATGATTACATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 90 bp GAAACCTTCAGGCAGCCAGAGAGAGCCATGCTTACGCTTTCGTTTTaGCATGATTACCCCCAGCAGAATAATAAACAGAATGATGACAAC +
Preference number: 5 (lower is better)
Translates to: ETFRQPERAMLTLSF*HDYPQQNNKQNDDN
Trigger: GTTGTCATCATTCTGTTTATTATTCTGCTGGGGGTAATCATGGCAAAACGAAAGCGTAAGCATGGCTCTCTCTGGCTGCCTGAAGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTTCACAATGCACACCTTaGAAACCTGGCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: ENILGIPVTRTTRCERKISQCTP*KPGMHR
Trigger: TCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTGA...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCAAGGCACTGGAAACGATaGACTTTATCCACACACTGC +
Preference number: 5 (lower is better)
Translates to: PGNIQMIDNHHLCAWFQPRHWKR*TLSTHC
Trigger: GCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCCT...TGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACGGTGATCGATACACTTaGCCCCATTCAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYGDRYT*PHSDTE
Trigger: CTCCGTGTCTGAATGGGGCAAAGTGTATCGATCACC...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATGGTGATCGATACACTTaGCCCCATTCAGACACGGAG +
Preference number: 5 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNGDRYT*PHSDTE
Trigger: CTCCGTGTCTGAATGGGGCAAAGTGTATCGATCACC...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp CATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATGGATCGGGGTCACAGTaGTCAATGTTCTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: HSNDRQPSSMCLVPATYNGSGSQ*SMFSSH
Trigger: GTGTGAGGAGAACATTGACAACTGTGACCCCGATCC...ATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACATACATGTTGCACCCTaGCGACAGGGATTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYIHVAP*RQGLEA
Trigger: TGCCTCCAATCCCTGTCGCAAGGGTGCAACATGTAT...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCATGGATGCAGGGATaGCTCAGGCATTCGTTCACC +
Preference number: 5 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVPWMQG*LRHSFT
Trigger: GGTGAACGAATGCCTGAGCAATCCCTGCATCCATGG...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTATATCCATTCACCAGATaGTCACAAGTTCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLYPFTR*SQVPPF
Trigger: GAATGGAGGAACTTGTGACAATCTGGTGAATGGATA...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCTGCGTGTTGCCAGCATaGATGCAGACACCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSCVLPA*MQTPEC
Trigger: GCACTCAGGTGTCTGCATCAATGCTGGCAACACGCA...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCAGGCAGAACTTATTTaGCAGGTGTCATGGGCATCA +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGQAELI*QVSWAS
Trigger: TGATGCCCATGACACCTGCAAAATAAGTTCTGCCTG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATAAGCCTTCTGGACATTaGCAGTATCCTGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHKPSGH*QYPVPL
Trigger: CAATGGCACAGGATACTGCAAATGTCCAGAAGGCTT...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579475.7
CDS-3UTR CAA 90 bp TCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCTAAGCCTTCTGGACATTaGCAGTATCCTGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: SAPAACILFPIKILGFQPKPSGH*QYPVPL
Trigger: CAATGGCACAGGATACTGCAAATGTCCAGAAGGCTT...AGGCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
CDS-3UTR CAA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTGGATCGGGGTCACAGTaGTCAATGTTCTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVGSGSQ*SMFSSH
Trigger: GTGTGAGGAGAACATTGACAACTGTGACCCCGATCC...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTCTCTCAGTGCACTCATaGATGTTGTTCTCACAATGG +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGLSVHS*MLFSQW
Trigger: CCATTGTGAGAACAACATCAATGAGTGCACTGAGAG...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACAGTATTTGTCATACTaGCATGTCTTGCTGTTCCCC +
Preference number: 5 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVQYLSY*HVLLFP
Trigger: GGGGAACAGCAAGACATGCAAGTATGACAAATACTG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTTCCATTGGAAGGCACCTTGTCCCTGAGCAACCATCTGTTTGTCACCAGCTAAGGCTTGTATTCATCTaGCATTTCCACAAACTTGTC +
Preference number: 5 (lower is better)
Translates to: ISIGRHLVPEQPSVCHQLRLVFI*HFHKLV
Trigger: GACAAGTTTGTGGAAATGCAAGATGAATACAAGCCT...TAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCCAATGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAAAAGCACAAAGGTCTaGCCCTATAACATGCTGGTA +
Preference number: 5 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSKSTKV*PYNMLV
Trigger: TACCAGCATGTTATAGGGCAAGACCTTTGTGCTTTT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACATGACTGTCCACCACTaGCATCTTAGGAGGCCACAA +
Preference number: 5 (lower is better)
Translates to: KHSNDRQPSSMCLVPATYMTVHH*HLRRPQ
Trigger: TTGTGGCCTCCTAAGATGCAAGTGGTGGACAGTCAT...GTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp CTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCTCCTCATCTGCTCCAGCTGCTaGTATTCTGTTCCCAATCAA +
Preference number: 5 (lower is better)
Translates to: LQLLVFCSQSKFLVFSLLICSSC*YSVPNQ
Trigger: TTGATTGGGAACAGAATACAAGCAGCTGGAGCAGAT...GAGGAGGCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000602566.6
ENST00000652302.1
CDS-3UTR CAA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCAGCCCCTTTGTAGCCTaGTGGGCAGGTGCAAATATA +
Preference number: 5 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSSPFVA*WAGANI
Trigger: TATATTTGCACCTGCCCACAAGGCTACAAAGGGGCT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAATTGCATGCTCACAAGGATaGCTATTGGCCATGGCACAT +
Preference number: 5 (lower is better)
Translates to: IQMIDNHHLCAWFQPHTIACSQG*LLAMAH
Trigger: ATGTGCCATGGCCAATAGCAATCCTTGTGAGCATGC...AATTGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGGGATCGGGGTCACAGTaGTCAATGTTCTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVGSGSQ*SMFSSH
Trigger: GTGTGAGGAGAACATTGACAACTGTGACCCCGATCC...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GCCTTTAAAGCCCTTCTTGCAAGTACACCTGTATCCATTCACCAGATTGTCACAGGTTCAGGCATGGATTaGAGGCACATTCATCAATAT +
Preference number: 5 (lower is better)
Translates to: AFKALLASTPVSIHQIVTGSGMD*RHIHQY
Trigger: ATATTGATGAATGTGCCTCAAATCCATGCCTGAACC...TGTGACAATCTGGTGAATGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640021.1
CDS-3UTR CAA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACACATCCGCTTGGCAGTaGATCAGTTCTGCCACCATT +
Preference number: 5 (lower is better)
Translates to: INGSKGRESPFRMIKCLHTSAWQ*ISSATI
Trigger: AATGGTGGCAGAACTGATCAACTGCCAAGCGGATGT...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATGCATTCACATCCGCTaGGCAGTTGATCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTCIHIR*AVDQFC
Trigger: GCAGAACTGATCAACTGCCAAGCGGATGTGAATGCA...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGAGAGGTGTCTCTTCCTaGTTGTCCTGCATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVRGVSS*LSCMSR
Trigger: CCGAGACATGCAGGACAACAAGGAAGAGACACCTCT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACATTACACCTTTGGTTCCTTGCACGAGTTAACTaGTCTCTTGGTCATTCCAAC +
Preference number: 5 (lower is better)
Translates to: VRAKIPKPPLNKTLHLWFLARVN*SLGHSN
Trigger: GTTGGAATGACCAAGAGACAAGTTAACTCGTGCAAG...GAACCAAAGGTGTAATGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp TTGTCACCAGCTATGGCTAGTGCACAGAAGAGTGCTCAGTTTTGTGATGTTTCCAGATCAGTAAAAAGTTaGAAAGGCAGTGTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: LSPAMASAQKSAQFCDVSRSVKS*KGSVVL
Trigger: GAGGACAACACTGCCTTTCAAACTTTTTACTGATCT...GGAAACATCACAAAACTGAGCACTCTTCTGTGCACTAGCCATAGCTGGTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTTCACAAGGATTGCTATaGGCCATGGCACATTCATCC +
Preference number: 5 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVSQGLL*AMAHSS
Trigger: GGATGAATGTGCCATGGCCAATAGCAATCCTTGTGA...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp CTAATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTTCACAATGCACACCTTaGAAACCTGGCATGCACAGA +
Preference number: 5 (lower is better)
Translates to: LMSWKHSNDRQPSSMCLVSQCTP*KPGMHR
Trigger: TCTGTGCATGCCAGGTTTCAAAGGTGTGCATTGTGA...AACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCAGGCACTGGAAACGATaGACTTTATCCACACACTGC +
Preference number: 5 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSRHWKR*TLSTHC
Trigger: GCAGTGTGTGGATAAAGTCAATCGTTTCCAGTGCCT...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAAAACCATTCACACCGTaGATACATGTTGCACCCTTG +
Preference number: 5 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTKPFTP*IHVAPL
Trigger: CAAGGGTGCAACATGTATCAACGGTGTGAATGGTTT...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp TGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGTATCCATTCACCAGATaGTCACAAGTTCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: CPGNIQMIDNHHLCAWFQYPFTR*SQVPPF
Trigger: GAATGGAGGAACTTGTGACAATCTGGTGAATGGATA...CTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp GGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATTATCCATTCACCAGATaGTCACAAGTTCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: GNIQMIDNHHLCAWFQPHYPFTR*SQVPPF
Trigger: GAATGGAGGAACTTGTGACAATCTGGTGAATGGATA...ATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp ATGTCCTGGAAACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCACCTTTAAAGCCCTTCTaGCAAGTACACCTGTATCCA +
Preference number: 5 (lower is better)
Translates to: MSWKHSNDRQPSSMCLVPPLKPF*QVHLYP
Trigger: TGGATACAGGTGTACTTGCAAGAAGGGCTTTAAAGG...TGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTTTCCAGGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp AACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTGGTGAGTTAACTTGTCTCTaGGTCATTCCAACATTCCAA +
Preference number: 5 (lower is better)
Translates to: NILGIPVTRTTRCERKIGELTCL*VIPTFQ
Trigger: TTGGAATGTTGGAATGACCAAGAGACAAGTTAACTC...ACCAATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTACATACATTCAATGTATaGGTTAGGGCCAAAATCCCT +
Preference number: 5 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVHTFNV*VRAKIP
Trigger: AGGGATTTTGGCCCTAACCAATACATTGAATGTATG...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GACGCTAGTGTAGAATCTTCTCATGGATATGGCAGAAGCCTGCAGGGCTTAAAATATGCGGTCATTTTATaGGTTACTGGGTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: DASVESSHGYGRSLQGLKYAVIL*VTGFLI
Trigger: TATGAGAAACCCAGTAACCAATAAAATGACCGCATA...TTTTAAGCCCTGCAGGCTTCTGCCATATCCATGAGAAGATTCTACACTAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AATGTACACAAGGAAGTAACCATAGTACCACTTATTAGTGGGGGCCTCTGGGTATGTGATGTTTCCTATTaGACAGATGCTTTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: NVHKEVTIVPLISGGLWVCDVSY*TDAFSP
Trigger: TGGGGAAAAAGCATCTGTCAAATAGGAAACATCACA...TACCCAGAGGCCCCCACTAATAAGTGGTACTATGGTTACTTCCTTGTGTACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCCACAAAGCAAAGGCTTaGAAAATAAACTGCCTCGGT +
Preference number: 5 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSHKAKA*KINCLG
Trigger: ACCGAGGCAGTTTATTTTCAAAGCCTTTGCTTTGTG...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR CAA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACAAGCCTTCTGGACATTaGCAGTATCCTGTGCCATTG +
Preference number: 5 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYKPSGH*QYPVPL
Trigger: CAATGGCACAGGATACTGCAAATGTCCAGAAGGCTT...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR CAA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAAAACCATTCACACCGTaGATACATGTTGCACCCTTG +
Preference number: 5 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTKPFTP*IHVAPL
Trigger: CAAGGGTGCAACATGTATCAACGGTGTGAATGGTTT...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AACATTCAAATGATAGACAACCATCATCTATGTGCCTGGTTCCAGCCACATACAGGTTCAGGCATGGATTaGAGGCACATTCATCAATAT +
Preference number: 5 (lower is better)
Translates to: NIQMIDNHHLCAWFQPHTGSGMD*RHIHQY
Trigger: ATATTGATGAATGTGCCTCAAATCCATGCCTGAACC...TGTATGTGGCTGGAACCAGGCACATAGATGATGGTTGTCTATCATTTGAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579475.7
ENST00000640021.1
CDS-3UTR CAA 90 bp TTCCAACCTTCTTATAGGGCTGTTTTGGATCATAGAAAACAAGTCCAACTTTCCGTGCACTCATTGATGTaGTTCTCACAATGGACTCCA +
Preference number: 5 (lower is better)
Translates to: FQPSYRAVLDHRKQVQLSVHSLM*FSQWTP
Trigger: TGGAGTCCATTGTGAGAACAACATCAATGAGTGCAC...GGAAAGTTGGACTTGTTTTCTATGATCCAAAACAGCCCTATAAGAAGGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATAAATGGGTCCAAGGGCAGAGAGTCACCATTTAGAATGATAAAATGTTTGCACTCACAGTGGTTGTCTTaGAAGTGGTCTGCACAGTAT +
Preference number: 5 (lower is better)
Translates to: INGSKGRESPFRMIKCLHSQWLS*KWSAQY
Trigger: ATACTGTGCAGACCACTTCAAAGACAACCACTGTGA...GTGCAAACATTTTATCATTCTAAATGGTGACTCTCTGCCCTTGGACCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp GAGAACATACTGGGTATACCAGTAACACGGACCACACGGTGTGAAAGAAAGATTAAGGAAAATGTTCTGTaGAGTTTCTACGTTAGTTGC +
Preference number: 5 (lower is better)
Translates to: ENILGIPVTRTTRCERKIKENVL*SFYVSC
Trigger: GCAACTAACGTAGAAACTCAACAGAACATTTTCCTT...AATCTTTCTTTCACACCGTGTGGTCCGTGTTACTGGTATACCCAGTATGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ACATTCAATGTATTGGTTAGGGCCAAAATCCCTAAACCACCTCTCAACAAAACAGGTTCAGGCATGGATTaGAGGCACATTCATCAATAT +
Preference number: 5 (lower is better)
Translates to: TFNVLVRAKIPKPPLNKTGSGMD*RHIHQY
Trigger: ATATTGATGAATGTGCCTCAAATCCATGCCTGAACC...TGTTTTGTTGAGAGGTGGTTTAGGGATTTTGGCCCTAACCAATACATTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGACATGGACCCAAGGCTaGTATTCATCTTGCATTTCC +
Preference number: 5 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVTWTQG*YSSCIS
Trigger: GGAAATGCAAGATGAATACAAGCCTTGGGTCCATGT...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS-3UTR CAA 90 bp ATACTAAACCATACAGTCAGTCAGCCAATATATATTTGCGGGCCTAGTATATACATCTGCTCCAGCTGCTaGTATTCTGTTCCCAATCAA +
Preference number: 5 (lower is better)
Translates to: ILNHTVSQPIYICGPSIYICSSC*YSVPNQ
Trigger: TTGATTGGGAACAGAATACAAGCAGCTGGAGCAGAT...GTATATACTAGGCCCGCAAATATATATTGGCTGACTGACTGTATGGTTTAGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR CAA 90 bp CATCTGCTCCAGCTGCTTGTATTCTGTTCCCAATCAAAATTCTTGGTTTTCAGCACTGTTTGTAGGTGTTaGGGTTACATCAGTAAACAA +
Preference number: 5 (lower is better)
Translates to: HLLQLLVFCSQSKFLVFSTVCRC*GYISKQ
Trigger: TTGTTTACTGATGTAACCCAAACACCTACAAACAGT...GCTGAAAACCAAGAATTTTGATTGGGAACAGAATACAAGCAGCTGGAGCAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602566.6
CDS-3UTR CAA 90 bp AAGATGTGTCTCATAAAAACTGAGTCTCCAATTCAGAACCCAAATGAGAAAGTGCAATTTGGTCTGACATaGTGCTTAAGGAAAAGGGAG +
Preference number: 5 (lower is better)
Translates to: KMCLIKTESPIQNPNEKVQFGLT*CLRKRE
Trigger: CTCCCTTTTCCTTAAGCACAATGTCAGACCAAATTG...CACTTTCTCATTTGGGTTCTGAATTGGAGACTCAGTTTTTATGAGACACATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GGCTACTGGCACAGCCTGACTCGCAGTCCCGGGGACTaGGGCAGAAGCAGCGGGGTCCAGAGGCGGTGTGCA +
Preference number: 6 (lower is better)
Translates to: GYWHSLTRSPGD*GRSSGVQRRCA
Trigger: TGCACACCGCCTCTGGACCCCGCTGCTTCTGCCCCAGTCCCCGGGACTGCGAGTCAGGCTGTGCCAGTAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp AGGAGTAATAAGGAGGCTGGCGCTGAGGGTGGCAGCTaGCCCCGTGCTGGCAGGGGCTACTGGCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: RSNKEAGAEGGS*PRAGRGYWHSL
Trigger: CAGGCTGTGCCAGTAGCCCCTGCCAGCACGGGGGCAGCTGCCACCCTCAGCGCCAGCCTCCTTATTACTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp ACCTGCATCCAGGAGACGCTTGGCAGCATCAGCCCGTaGGTAGCGGGCTGCAAGGTGCAGGGCCATCTCACC +
Preference number: 6 (lower is better)
Translates to: TCIQETLGSISP*VAGCKVQGHLT
Trigger: GGTGAGATGGCCCTGCACCTTGCAGCCCGCTACTCACGGGCTGATGCTGCCAAGCGTCTCCTGGATGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp TCCCCCTGGGAGTCCCGCTTAATGCGCAGGTTGGTGTaGAGCAGGGTACCCAGTGCCCGCAAGAAGCTGCGA +
Preference number: 6 (lower is better)
Translates to: SPWESRLMRRLV*SRVPSARKKLR
Trigger: TCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCATTAAGCGGGACTCCCAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS CCA 72 bp TGGGCAAACGGGCCATTTCTGGAATCTGGTACATGGTaGGCAGGGGGCCCGCAACAGCTGGAGGGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: WANGPFLESGTW*AGGPQQLEGRW
Trigger: CCACCTGCCCTCCAGCTGTTGCGGGCCCCCTGCCCACCATGTACCAGATTCCAGAAATGGCCCGTTTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CACTGGGCAAACGGGCCATTTCTGGAATCTGGTACATaGTGGGCAGGGGGCCCGCAACAGCTGGAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: HWANGPFLESGT*WAGGPQQLEGR
Trigger: CCTGCCCTCCAGCTGTTGCGGGCCCCCTGCCCACCATGTACCAGATTCCAGAAATGGCCCGTTTGCCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp TGGTCTGAGCTACCTGCCCGTCCTGCTGGGGCATCATaGCAGTGGGGAAAGCCACACTGGGCAAACGGGCCA +
Preference number: 6 (lower is better)
Translates to: WSELPARPAGAS*QWGKPHWANGP
Trigger: TGGCCCGTTTGCCCAGTGTGGCTTTCCCCACTGCCATGATGCCCCAGCAGGACGGGCAGGTAGCTCAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp GGGTACACCATGAGTTCCCCCTGGGAGTCCCGCTTAATGCGCAGGTaGGTGTGGAGCAGGGTACCCAGTGCCCGCAAGAAGCTGCGAGCA +
Preference number: 6 (lower is better)
Translates to: GYTMSSPWESRLMRR*VWSRVPSARKKLRA
Trigger: TGCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCATTAAGCGGGACTCCCAGGGGGAACTCATGGTGTACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS CCA 72 bp CCTTCAGGTGGCCTGCTCTGGGGAGCTATGCCAGGATaGGTGCCCTCAGCTGGAGCCAGGACCATACCAAAC +
Preference number: 6 (lower is better)
Translates to: PSGGLLWGAMPG*VPSAGARTIPN
Trigger: GTTTGGTATGGTCCTGGCTCCAGCTGAGGGCACCCATCCTGGCATAGCTCCCCAGAGCAGGCCACCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp CAGGCATGGCTGTTGCAGGCCTCATCACAGACGCCATCCCGAGCTTaGTCGGCACAATACTGGCTCAGACAGGTGGCAGGAGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: QAWLLQASSQTPSRA*SAQYWLRQVAGGVL
Trigger: CAGCACCCCTCCTGCCACCTGTCTGAGCCAGTATTGTGCCGACAAAGCTCGGGATGGCGTCTGTGATGAGGCCTGCAACAGCCATGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp AGGGGTGAGAGCCAGCGATGGTGTCCTACGGATGTCTaGAGCTTCAAGGTGCTGCTGTGTCCATGGCCGTCG +
Preference number: 6 (lower is better)
Translates to: RGESQRWCPTDV*SFKVLLCPWPS
Trigger: CGACGGCCATGGACACAGCAGCACCTTGAAGCTGCAGACATCCGTAGGACACCATCGCTGGCTCTCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GTGAGAGAACAGTCACCCCCATCCCACTGGCAGGCATaGCTGTTGCAGGCCTCATCACAGACGCCATCCCGA +
Preference number: 6 (lower is better)
Translates to: VREQSPPSHWQA*LLQASSQTPSR
Trigger: TCGGGATGGCGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCCAGTGGGATGGGGGTGACTGTTCTCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp ATGAGTTCCCCCTGGGAGTCCCGCTTAATGCGCAGGTaGGTGTGGAGCAGGGTACCCAGTGCCCGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: MSSPWESRLMRR*VWSRVPSARKK
Trigger: CTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCATTAAGCGGGACTCCCAGGGGGAACTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS TCA 72 bp GACACAAGAGGGTATGACAGGGTCCCCTGTATGGCGTaGGAGGCCAGGAGAGCTGCTGCTGCATCCGTGTTC +
Preference number: 6 (lower is better)
Translates to: DTRGYDRVPCMA*EARRAAAASVF
Trigger: GAACACGGATGCAGCAGCAGCTCTCCTGGCCTCTCACGCCATACAGGGGACCCTGTCATACCCTCTTGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS TCA 72 bp CCAGTGCCACTCACTGACGACAGACACAAGAGGGTATaGCAGGGTCCCCTGTATGGCGTGAGAGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: PVPLTDDRHKRV*QGPLYGVRGQE
Trigger: CTCCTGGCCTCTCACGCCATACAGGGGACCCTGTCATACCCTCTTGTGTCTGTCGTCAGTGAGTGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493703.1
CDS GCA 72 bp CAGAAGCAGCGGGGTCCAGAGGCGGTGTGCACACACTaGTCCCCCTTCCTACATTTCACTTGTCCACAGCTG +
Preference number: 6 (lower is better)
Translates to: QKQRGPEAVCTH*SPFLHFTCPQL
Trigger: CAGCTGTGGACAAGTGAAATGTAGGAAGGGGGAGCAGTGTGTGCACACCGCCTCTGGACCCCGCTGCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp AACAGTCACCCCCATCCCACTGGCAGGCATGGCTGTTaGAGGCCTCATCACAGACGCCATCCCGAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: NSHPHPTGRHGC*RPHHRRHPELC
Trigger: ACAAAGCTCGGGATGGCGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCCAGTGGGATGGGGGTGACTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp TGGTGTGGAGCAGGGTACCCAGTGCCCGCAAGAAGCTaGGAGCATCCTGGAGCAGTTGTTCAGGTGGCATCA +
Preference number: 6 (lower is better)
Translates to: WCGAGYPVPARS*EHPGAVVQVAS
Trigger: TGATGCCACCTGAACAACTGCTCCAGGATGCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS GCA 72 bp CTTAATGCGCAGGTTGGTGTGGAGCAGGGTACCCAGTaGCCGCAAGAAGCTGCGAGCATCCTGGAGCAGTTG +
Preference number: 6 (lower is better)
Translates to: LNAQVGVEQGTQ*PQEAASILEQL
Trigger: CAACTGCTCCAGGATGCTCGCAGCTTCTTGCGGGCACTGGGTACCCTGCTCCACACCAACCTGCGCATTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS CCA 72 bp TGCCGTGTAGAGTTCACAGCGGCTACCCGAGAATGGTaGGGCACACTGGCAGGAGTAATAAGGAGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: CRVEFTAATREW*GTLAGVIRRLA
Trigger: CGCCAGCCTCCTTATTACTCCTGCCAGTGTGCCCCACCATTCTCGGGTAGCCGCTGTGAACTCTACACGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GGGTGCCGTGTAGAGTTCACAGCGGCTACCCGAGAATaGTGGGGCACACTGGCAGGAGTAATAAGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GCRVEFTAATRE*WGTLAGVIRRL
Trigger: CAGCCTCCTTATTACTCCTGCCAGTGTGCCCCACCATTCTCGGGTAGCCGCTGTGAACTCTACACGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CCACAGAGGCTGGGAAAGGATGATAGGCTGGGAGAATaGTCTGAGCTACCTGCCCGTCCTGCTGGGGCATCA +
Preference number: 6 (lower is better)
Translates to: PQRLGKDDRLGE*SELPARPAGAS
Trigger: TGATGCCCCAGCAGGACGGGCAGGTAGCTCAGACCATTCTCCCAGCCTATCATCCTTTCCCAGCCTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp ATGGTGAGAGAACAGTCACCCCCATCCCACTGGCAGGCATGGCTGTaGCAGGCCTCATCACAGACGCCATCCCGAGCTTTGTCGGCACAA +
Preference number: 6 (lower is better)
Translates to: MVREQSPPSHWQAWL*QASSQTPSRALSAQ
Trigger: TTGTGCCGACAAAGCTCGGGATGGCGTCTGTGATGAGGCCTGCAACAGCCATGCCTGCCAGTGGGATGGGGGTGACTGTTCTCTCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp GCACTGGGCCGTCTAGACTTCTTGCCCATTGGGGTGTaGTTCAGGCTGAGGAAAGATCTGTTGGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: ALGRLDFLPIGV*FRLRKDLLGPQ
Trigger: CTGTGGGCCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CCAGCACTGCCACTGCCTGGAGACACAATGTGGTGGTaGGATAGCAACTGGCTCACTGAGGGAAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: PALPLPGDTMWW*DSNWLTEGSTV
Trigger: CACTGTGCTTCCCTCAGTGAGCCAGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GTACTTGCCCACAGAGGCTGGGAAAGGATGATAGGCTaGGAGAATGGTCTGAGCTACCTGCCCGTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: VLAHRGWERMIG*ENGLSYLPVLL
Trigger: CAGCAGGACGGGCAGGTAGCTCAGACCATTCTCCCAGCCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp CTGTTGCAGGCCTCATCACAGACGCCATCCCGAGCTTaGTCGGCACAATACTGGCTCAGACAGGTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LLQASSQTPSRA*SAQYWLRQVAG
Trigger: TCCTGCCACCTGTCTGAGCCAGTATTGTGCCGACAAAGCTCGGGATGGCGTCTGTGATGAGGCCTGCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp CACCCTGGAGGTGACCACTGTGACTGGGTGTTCGCTCAGCAGCATTaGAGGAAGCATAACTGTGCTGTGAAGGGGGTGTGGGGTACTTGC +
Preference number: 6 (lower is better)
Translates to: HPGGDHCDWVFAQQH*RKHNCAVKGVWGTC
Trigger: GCAAGTACCCCACACCCCCTTCACAGCACAGTTATGCTTCCTCAAATGCTGCTGAGCGAACACCCAGTCACAGTGGTCACCTCCAGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp GAGAGGCCAGGAGAGCTGCTGCTGCATCCGTGTTCTTaGAGCAGTGGTCTGAGTCTTGAACACACTGGCGGT +
Preference number: 6 (lower is better)
Translates to: ERPGELLLHPCS*SSGLSLEHTGG
Trigger: ACCGCCAGTGTGTTCAAGACTCAGACCACTGCTTCAAGAACACGGATGCAGCAGCAGCTCTCCTGGCCTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS TCA 72 bp AGTCAGGGATTCACTGACGACAGACACAAGAGGGTATaGCAGGGTCCCCTGTATGGCGTGAGAGGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SQGFTDDRHKRV*QGPLYGVRGQE
Trigger: CTCCTGGCCTCTCACGCCATACAGGGGACCCTGTCATACCCTCTTGTGTCTGTCGTCAGTGAATCCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp GCTGAGGAAAGATCTGTTGGGCCCACAGATGACAGGTaGGAGAGCAGAAGTCAACACGGTGCCTGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: AEERSVGPTDDR*ESRSQHGAWRA
Trigger: AGCCCTCCAGGCACCGTGTTGACTTCTGCTCTCTCACCTGTCATCTGTGGGCCCAACAGATCTTTCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp CTGGGACTGGATGGAGCCTACTCAAGCTTCCAGCACTaGCACTGCCTGGAGACACAATGTGGTGGTGGGATA +
Preference number: 6 (lower is better)
Translates to: LGLDGAYSSFQH*HCLETQCGGGI
Trigger: TATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp AAGCTTCCAGCACTGCCACTGCCTGGAGACACAATGTaGTGGTGGGATAGCAACTGGCTCACTGAGGGAAGC +
Preference number: 6 (lower is better)
Translates to: KLPALPLPGDTM*WWDSNWLTEGS
Trigger: GCTTCCCTCAGTGAGCCAGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp ATGCGGTTCATCCAATCTGCTGGGACTGGGACTGGATaGAGCCTACTCAAGCTTCCAGCACTGCCACTGCCT +
Preference number: 6 (lower is better)
Translates to: MRFIQSAGTGTG*SLLKLPALPLP
Trigger: AGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CTCCATGCGGTTCATCCAATCTGCTGGGACTGGGACTaGATGGAGCCTACTCAAGCTTCCAGCACTGCCACT +
Preference number: 6 (lower is better)
Translates to: LHAVHPICWDWD*MEPTQASSTAT
Trigger: AGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp AGGCTAGTAGGCATGGTACTCTTGGCACTGGGCCGTCTAGACTTCTaGCCCATTGGGGTGTGCTTCAGGCTGAGGAAAGATCTGTTGGGC +
Preference number: 6 (lower is better)
Translates to: RLVGMVLLALGRLDF*PIGVCFRLRKDLLG
Trigger: GCCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGTACCATGCCTACTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp TTTGCCTCCTTGGCAAGGTTAGGGAGGCTAGTAGGCATGGTACTCTaGGCACTGGGCCGTCTAGACTTCTTGCCCATTGGGGTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: FASLARLGRLVGMVL*ALGRLDFLPIGVCF
Trigger: GAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGTACCATGCCTACTAGCCTCCCTAACCTTGCCAAGGAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp CCCACAGCATCCTGTCCCACTGGCTCACGACGCTTGTaGTTGCTTGCATCTCGGCGAAGAGTGAAACCTTCA +
Preference number: 6 (lower is better)
Translates to: PTASCPTGSRRL*LLASRRRVKPS
Trigger: TGAAGGTTTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTGAGCCAGTGGGACAGGATGCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp CCCCATGTGTCAAGGGAGAGACCAGGTGGAGGTAATTaGATCATGGGGGCGGTTTCTCCCATGCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: PHVSRERPGGGN*IMGAVSPMLFS
Trigger: GGAGAACAGCATGGGAGAAACCGCCCCCATGATTCAATTACCTCCACCTGGTCTCTCCCTTGACACATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650638.1
CDS GCA 72 bp ATCCTGTCCCACTGGCTCACGACGCTTGTGATTGCTTaGATCTCGGCGAAGAGTGAAACCTTCAGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: ILSHWLTTLVIA*ISAKSETFRQP
Trigger: TGGCTGCCTGAAGGTTTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTGAGCCAGTGGGACAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp GATGGTGTCCTACGGATGTCTGCAGCTTCAAGGTGCTaGTGTGTCCATGGCCGTCGATCAATGGGGTCATCT +
Preference number: 6 (lower is better)
Translates to: DGVLRMSAASRC*CVHGRRSMGSS
Trigger: AGATGACCCCATTGATCGACGGCCATGGACACAGCAGCACCTTGAAGCTGCAGACATCCGTAGGACACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp TGTATTCATCCAGAAGGCGCACAATGTCATGGTGCATaGGATCCCGAGCCACATCCCGGGGAAGACGATCCA +
Preference number: 6 (lower is better)
Translates to: CIHPEGAQCHGA*DPEPHPGEDDP
Trigger: TGGATCGTCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp GGTGGGATAGCAACTGGCTCACTGAGGGAAGCACAGTaGTGGCCCCATGTGCCAAAGGCTGCATTTCATGAA +
Preference number: 6 (lower is better)
Translates to: GGIATGSLREAQ*WPHVPKAAFHE
Trigger: TTCATGAAATGCAGCCTTTGGCACATGGGGCCAGCACTGTGCTTCCCTCAGTGAGCCAGTTGCTATCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp CTGGATGGAGCCTACTCAAGCTTCCAGCACTGCCACTaGCTGGAGACACAATGTGGTGGTGGGATAGCAACT +
Preference number: 6 (lower is better)
Translates to: LDGAYSSFQHCH*LETQCGGGIAT
Trigger: AGTTGCTATCCCACCACCACATTGTGTCTCCAGGCAGTGGCAGTGCTGGAAGCTTGAGTAGGCTCCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp CTGGGTCTCATTCACCTCCATGCGGTTCATCCAATCTaGTGGGACTGGGACTGGATGGAGCCTACTCAAGCT +
Preference number: 6 (lower is better)
Translates to: LGLIHLHAVHPI*WDWDWMEPTQA
Trigger: AGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp AAGCATAACTGTGCTGTGAAGGGGGTGTGGGGTACTTaGCCACAGAGGCTGGGAAAGGATGATAGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: KHNCAVKGVWGT*PQRLGKDDRLG
Trigger: TCCCAGCCTATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCACAGCACAGTTATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp AGGCCCCGAGTGCCTGGTGGGCAAGAGCACTTGAAATaGTTCACAAGGTCAATACAGGTGCCTCCATTCTGG +
Preference number: 6 (lower is better)
Translates to: RPRVPGGQEHLK*FTRSIQVPPFW
Trigger: CCAGAATGGAGGCACCTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp ACAATAACCAGGGTACCTTCTGCCAGGTTCTCAGGTTaGTCAGCAGCACAGTCCAGCCCATCCCAACCACAC +
Preference number: 6 (lower is better)
Translates to: TITRVPSARFSG*SAAQSSPSQPH
Trigger: GTGTGGTTGGGATGGGCTGGACTGTGCTGCTGACCAACCTGAGAACCTGGCAGAAGGTACCCTGGTTATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp ACTCTTGGCACTGGGCCGTCTAGACTTCTTGCCCATTaGGGTGTGCTTCAGGCTGAGGAAAGATCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: TLGTGPSRLLAH*GVLQAEERSVG
Trigger: CCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GGTCTCATTCACCTCCATGCGGTTCATCCAATCTGCTaGGACTGGGACTGGATGGAGCCTACTCAAGCTTCC +
Preference number: 6 (lower is better)
Translates to: GLIHLHAVHPIC*DWDWMEPTQAS
Trigger: GGAAGCTTGAGTAGGCTCCATCCAGTCCCAGTCCCAGCAGATTGGATGAACCGCATGGAGGTGAATGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GGGCTGGTGGTCACATCTGACCAGTCAGAAGCAGAGTaGGGTGATGAACTTGACCACTGGTCAGGAGACTCT +
Preference number: 6 (lower is better)
Translates to: GLVVTSDQSEAE*GDELDHWSGDS
Trigger: AGAGTCTCCTGACCAGTGGTCAAGTTCATCACCCCACTCTGCTTCTGACTGGTCAGATGTGACCACCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp TGGACTCTCTCACGCATAAACCTGCATGTTGTTGTGTaGTGGCTCAGACATGTGTGTCCCAGGTCCCCGCTG +
Preference number: 6 (lower is better)
Translates to: WTLSRINLHVVV*WLRHVCPRSPL
Trigger: CAGCGGGGACCTGGGACACACATGTCTGAGCCACCACACAACAACATGCAGGTTTATGCGTGAGAGAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp CCCATTGGGGTGTGCTTCAGGCTGAGGAAAGATCTGTaGGGCCCACAGATGACAGGTGAGAGAGCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: PIGVCFRLRKDL*GPQMTGERAEV
Trigger: GACTTCTGCTCTCTCACCTGTCATCTGTGGGCCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp GGCATGGTACTCTTGGCACTGGGCCGTCTAGACTTCTaGCCCATTGGGGTGTGCTTCAGGCTGAGGAAAGAT +
Preference number: 6 (lower is better)
Translates to: GMVLLALGRLDF*PIGVCFRLRKD
Trigger: ATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGTACCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp TTGGCAAGGTTAGGGAGGCTAGTAGGCATGGTACTCTaGGCACTGGGCCGTCTAGACTTCTTGCCCATTGGG +
Preference number: 6 (lower is better)
Translates to: LARLGRLVGMVL*ALGRLDFLPIG
Trigger: CCCAATGGGCAAGAAGTCTAGACGGCCCAGTGCCAAGAGTACCATGCCTACTAGCCTCCCTAACCTTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp GGTGACCACTGTGACTGGGTGTTCGCTCAGCAGCATTaGAGGAAGCATAACTGTGCTGTGAAGGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GDHCDWVFAQQH*RKHNCAVKGVW
Trigger: CCACACCCCCTTCACAGCACAGTTATGCTTCCTCAAATGCTGCTGAGCGAACACCCAGTCACAGTGGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp GAGAGAGCAGAAGTCAACACGGTGCCTGGAGGGCTTGGGGTCACATaGTATTCATCCAGAAGGCGCACAATGTCATGGTGCATGCGATCC +
Preference number: 6 (lower is better)
Translates to: ERAEVNTVPGGLGVT*YSSRRRTMSWCMRS
Trigger: GGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACAATGTGACCCCAAGCCCTCCAGGCACCGTGTTGACTTCTGCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp GACTTCTTGCCCATTGGGGTGTGCTTCAGGCTGAGGAAAGATCTGTaGGGCCCACAGATGACAGGTGAGAGAGCAGAAGTCAACACGGTG +
Preference number: 6 (lower is better)
Translates to: DFLPIGVCFRLRKDL*GPQMTGERAEVNTV
Trigger: CACCGTGTTGACTTCTGCTCTCTCACCTGTCATCTGTGGGCCCAACAGATCTTTCCTCAGCCTGAAGCACACCCCAATGGGCAAGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp CCAGGGGGCACTGACAGTAATGCGTGTTGCCAGCATTaGTGCAGACACCTGAGTGCTGGCACAAGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: PGGTDSNACCQH*CRHLSAGTSVQ
Trigger: TTGAACACTTGTGCCAGCACTCAGGTGTCTGCATCAATGCTGGCAACACGCATTACTGTCAGTGCCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000478864.1
CDS TCA 72 bp AGAGTAGGCCCCGAGTGCCTGGTGGGCAAGAGCACTTaGAATGGTTCACAAGGTCAATACAGGTGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: RVGPECLVGKST*NGSQGQYRCLH
Trigger: ATGGAGGCACCTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGCCTACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp CACGACGCTTGTGATTGCTTGCATCTCGGCGAAGAGTaGAACCTTCAGGCAGCCAGAGAGAGCCATGCTTAC +
Preference number: 6 (lower is better)
Translates to: HDACDCLHLGEE*NLQAARESHAY
Trigger: GTAAGCATGGCTCTCTCTGGCTGCCTGAAGGTTTCACTCTTCGCCGAGATGCAAGCAATCACAAGCGTCGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp ACATTGTATTCATCCAGAAGGCGCACAATGTCATGGTaGATGCGATCCCGAGCCACATCCCGGGGAAGACGA +
Preference number: 6 (lower is better)
Translates to: TLYSSRRRTMSW*MRSRATSRGRR
Trigger: TCGTCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp TGCGTGTTGCCAGCATTGATGCAGACACCTGAGTGCTaGCACAAGTGTTCAACAAGCACACCTCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: CVLPALMQTPEC*HKCSTSTPLLE
Trigger: CTCCAGGAGAGGTGTGCTTGTTGAACACTTGTGCCAGCACTCAGGTGTCTGCATCAATGCTGGCAACACGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GTCACATTGTATTCATCCAGAAGGCGCACAATGTCATaGTGCATGCGATCCCGAGCCACATCCCGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: VTLYSSRRRTMS*CMRSRATSRGR
Trigger: TCTTCCCCGGGATGTGGCTCGGGATCGCATGCACCATGACATTGTGCGCCTTCTGGATGAATACAATGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp GTGAGAGAGCAGAAGTCAACACGGTGCCTGGAGGGCTaGGGGTCACATTGTATTCATCCAGAAGGCGCACAA +
Preference number: 6 (lower is better)
Translates to: VREQKSTRCLEG*GSHCIHPEGAQ
Trigger: TTGTGCGCCTTCTGGATGAATACAATGTGACCCCAAGCCCTCCAGGCACCGTGTTGACTTCTGCTCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp TTCTCTTCACAGAGTAGGCCCCGAGTGCCTGGTGGGCAAGAGCACTaGAAATGGTTCACAAGGTCAATACAGGTGCCTCCATTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: FSSQSRPRVPGGQEH*KWFTRSIQVPPFWQ
Trigger: CTGCCAGAATGGAGGCACCTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGCCTACTCTGTGAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp GTGAAGAGCAGATTTTCCATGGTCATCCACTGCATTCACATCCGCTaGGCAGTTGATCAGTTCTGCCACCATTCCCTCCACAGCCAGGCG +
Preference number: 6 (lower is better)
Translates to: VKSRFSMVIHCIHIR*AVDQFCHHSLHSQA
Trigger: CGCCTGGCTGTGGAGGGAATGGTGGCAGAACTGATCAACTGCCAAGCGGATGTGAATGCAGTGGATGACCATGGAAAATCTGCTCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp CTCAGAGACTTCTTCCTCCTACTACCCTTGGCATCCTTTGCCTCCTaGGCAAGGTTAGGGAGGCTAGTAGGCATGGTACTCTTGGCACTG +
Preference number: 6 (lower is better)
Translates to: LRDFFLLLPLASFAS*ARLGRLVGMVLLAL
Trigger: CAGTGCCAAGAGTACCATGCCTACTAGCCTCCCTAACCTTGCCAAGGAGGCAAAGGATGCCAAGGGTAGTAGGAGGAAGAAGTCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp CGAAGAGTGAAACCTTCAGGCAGCCAGAGAGAGCCATaGTTACGCTTTCGTTTTGCCATGATTACCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RRVKPSGSQREP*LRFRFAMITPS
Trigger: GCTGGGGGTAATCATGGCAAAACGAAAGCGTAAGCATGGCTCTCTCTGGCTGCCTGAAGGTTTCACTCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CGATCCCGAGCCACATCCCGGGGAAGACGATCCATATaGTCTGTGATGTCTCGATTGGCAAAATGGTCTAAC +
Preference number: 6 (lower is better)
Translates to: RSRATSRGRRSI*SVMSRLAKWSN
Trigger: GTTAGACCATTTTGCCAATCGAGACATCACAGACCATATGGATCGTCTTCCCCGGGATGTGGCTCGGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CATTTGAGGAAGCATAACTGTGCTGTGAAGGGGGTGTaGGGTACTTGCCCACAGAGGCTGGGAAAGGATGAT +
Preference number: 6 (lower is better)
Translates to: HLRKHNCAVKGV*GTCPQRLGKDD
Trigger: ATCATCCTTTCCCAGCCTCTGTGGGCAAGTACCCCACACCCCCTTCACAGCACAGTTATGCTTCCTCAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp ATACCCCGAGTGCCTGGTGGGCAAGAGCACTTGAAATaGTTCACAAGGTCAATACAGGTGCCTCCATTCTGG +
Preference number: 6 (lower is better)
Translates to: IPRVPGGQEHLK*FTRSIQVPPFW
Trigger: CCAGAATGGAGGCACCTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478864.1
CDS TCA 72 bp TCACAAGGGTTTGGGGAACAGGGAGCCAATACTGTCTaGCAATTCTTGCCTGTGTATGGCAGCACACAGTGG +
Preference number: 6 (lower is better)
Translates to: SQGFGEQGANTV*QFLPVYGSTQW
Trigger: CCACTGTGTGCTGCCATACACAGGCAAGAATTGTCAGACAGTATTGGCTCCCTGTTCCCCAAACCCTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp GAAGAAGGTACCTTGCTTCCCCTTTGCCTTCTGCCATaGTTGTTAAGTTTCCTGAGGCCTTCCCAGCCATGC +
Preference number: 6 (lower is better)
Translates to: EEGTLLPLCLLP*LLSFLRPSQPC
Trigger: GCATGGCTGGGAAGGCCTCAGGAAACTTAACAATCATGGCAGAAGGCAAAGGGGAAGCAAGGTACCTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650638.1
CDS GCA 72 bp CCTCTGCATCTTCATCTTCATCACTCAAATCTGAGCTaGCTCCTCGGAGAGAAGCCAACATCAATGGGGTGC +
Preference number: 6 (lower is better)
Translates to: PLHLHLHHSNLS*LLGEKPTSMGC
Trigger: GCACCCCATTGATGTTGGCTTCTCTCCGAGGAGGCAGCTCAGATTTGAGTGATGAAGATGAAGATGCAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp TTACAGGGTTCACTCAGACACTCATTCATGTCTGTCTaGCACTTATCCCCAGTGAAACCCGGAAGGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LQGSLRHSFMSV*HLSPVKPGRQR
Trigger: CCTCTGCCTTCCGGGTTTCACTGGGGATAAGTGCCAGACAGACATGAATGAGTGTCTGAGTGAACCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp ACCCAGGCCATCAACACACGTTCCCTCATTCAGGCATaGATGAGAGCTGCATTCATTGATCTCATGGAGGCA +
Preference number: 6 (lower is better)
Translates to: TQAINTRSLIQA*MRAAFIDLMEA
Trigger: TGCCTCCATGAGATCAATGAATGCAGCTCTCATCCATGCCTGAATGAGGGAACGTGTGTTGATGGCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CTTCAAGGTGCTGCTGTGTCCATGGCCGTCGATCAATaGGGTCATCTTCTTCTGAGAGTAAGGCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: LQGAAVSMAVDQ*GHLLLRVRPHL
Trigger: AAGATGAGGCCTTACTCTCAGAAGAAGATGACCCCATTGATCGACGGCCATGGACACAGCAGCACCTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp TTCCAGAAAGACTTTAGAGCCAGCCACCTCCTGTTCTaGTTCACCAGGAAGGGATCTGCGTGTCATCCTCTG +
Preference number: 6 (lower is better)
Translates to: FQKDFRASHLLF*FTRKGSACHPL
Trigger: CAGAGGATGACACGCAGATCCCTTCCTGGTGAACAAGAACAGGAGGTGGCTGGCTCTAAAGTCTTTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256646.7
ENST00000493703.1
CDS CAA 90 bp CCATCCCAACCACACTCCTCACTGTTGCACCCCTGGTCACAGTGGTaGTCTTTGAAGTGGTCTGCACAGTATTTGTCATACTTGCATGTC +
Preference number: 6 (lower is better)
Translates to: PSQPHSSLLHPWSQW*SLKWSAQYLSYLHV
Trigger: GACATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGAGTGTGGTTGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp GATAAGGATGATTTCATACCCCGAGTGCCTGGTGGGCAAGAGCACTaGAAATGGTTCACAAGGTCAATACAGGTGCCTCCATTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: DKDDFIPRVPGGQEH*KWFTRSIQVPPFWQ
Trigger: CTGCCAGAATGGAGGCACCTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGTATGAAATCATCCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478864.1
CDS TCA 72 bp GACACTCATTCATGTCTGTCTGGCACTTATCCCCAGTaGAACCCGGAAGGCAGAGGCAGGAGAAAGTATTCA +
Preference number: 6 (lower is better)
Translates to: DTHSCLSGTYPQ*NPEGRGRRKYS
Trigger: TGAATACTTTCTCCTGCCTCTGCCTTCCGGGTTTCACTGGGGATAAGTGCCAGACAGACATGAATGAGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp CATCAAATCCTGCCTGGCACTTGCAAGTGTAACTGTTaGCGTAGTCAGAGCAGGTCCCTCCATTCTTACAGG +
Preference number: 6 (lower is better)
Translates to: HQILPGTCKCNC*RSQSRSLHSYR
Trigger: CCTGTAAGAATGGAGGGACCTGCTCTGACTACGTCAACAGTTACACTTGCAAGTGCCAGGCAGGATTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp GAGCCACATCCCGGGGAAGACGATCCATATGGTCTGTaGTGTCTCGATTGGCAAAATGGTCTAACAGGATCT +
Preference number: 6 (lower is better)
Translates to: EPHPGEDDPYGL*CLDWQNGLTGS
Trigger: AGATCCTGTTAGACCATTTTGCCAATCGAGACATCACAGACCATATGGATCGTCTTCCCCGGGATGTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp ATTTCATACCCCGAGTGCCTGGTGGGCAAGAGCACTTaGAATGGTTCACAAGGTCAATACAGGTGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: ISYPECLVGKST*NGSQGQYRCLH
Trigger: ATGGAGGCACCTGTATTGACCTTGTGAACCATTTCAAGTGCTCTTGCCCACCAGGCACTCGGGGTATGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478864.1
CDS CCA 72 bp CAACCACACTCCTCACTGTTGCACCCCTGGTCACAGTaGTTGTCTTTGAAGTGGTCTGCACAGTATTTGTCA +
Preference number: 6 (lower is better)
Translates to: QPHSSLLHPWSQ*LSLKWSAQYLS
Trigger: TGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGAGTGTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GATTTTCCATGGTCATCCACTGCATTCACATCCGCTTaGCAGTTGATCAGTTCTGCCACCATTCCCTCCACA +
Preference number: 6 (lower is better)
Translates to: DFPWSSTAFTSA*QLISSATIPST
Trigger: TGTGGAGGGAATGGTGGCAGAACTGATCAACTGCCAAGCGGATGTGAATGCAGTGGATGACCATGGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GCTGGAGCCAGGACCATACCAAACATCTCATTGTACTaGGTCTCATTCACCTCCATGCGGTTCATCCAATCT +
Preference number: 6 (lower is better)
Translates to: AGARTIPNISLY*VSFTSMRFIQS
Trigger: AGATTGGATGAACCGCATGGAGGTGAATGAGACCCAGTACAATGAGATGTTTGGTATGGTCCTGGCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp TACTTGCATGTCTTGCTGTTCCCCTGGCATTCAAAGTaGTCAAACAGGCACTCGACCGTGTTGCACAGCTCA +
Preference number: 6 (lower is better)
Translates to: YLHVLLFPWHSK*SNRHSTVLHSS
Trigger: TGAGCTGTGCAACACGGTCGAGTGCCTGTTTGACAACTTTGAATGCCAGGGGAACAGCAAGACATGCAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp CCACACTCCTCACTGTTGCACCCCTGGTCACAGTGGTaGTCTTTGAAGTGGTCTGCACAGTATTTGTCATAC +
Preference number: 6 (lower is better)
Translates to: PHSSLLHPWSQW*SLKWSAQYLSY
Trigger: GTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp AGATTTTCCATGGTCATCCACTGCATTCACATCCGCTaGGCAGTTGATCAGTTCTGCCACCATTCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: RFSMVIHCIHIR*AVDQFCHHSLH
Trigger: GTGGAGGGAATGGTGGCAGAACTGATCAACTGCCAAGCGGATGTGAATGCAGTGGATGACCATGGAAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp CAACCACACTCCTCACTGTTGCACCCCTGGTCACAGTGGTTGTCTTaGAAGTGGTCTGCACAGTATTTGTCATACTTGCATGTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: QPHSSLLHPWSQWLS*KWSAQYLSYLHVLL
Trigger: CAGCAAGACATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGAGTGTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp CCTCACTGTTGCACCCCTGGTCACAGTGGTTGTCTTTaGAGTGGTCTGCACAGTATTTGTCATACTTGCATG +
Preference number: 6 (lower is better)
Translates to: PHCCTPGHSGCL*SGLHSICHTCM
Trigger: CATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp AGAGTTGCCTCCACATTATTGACAGCAGCTGCCCAGTaGAGAGCAGATTTTCCATGGTCATCCACTGCATTC +
Preference number: 6 (lower is better)
Translates to: RVASTLLTAAAQ*RADFPWSSTAF
Trigger: GAATGCAGTGGATGACCATGGAAAATCTGCTCTTCACTGGGCAGCTGCTGTCAATAATGTGGAGGCAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp GAGCTCTCAGTGCACTCATTGATGTTGTTCTCACAATaGACTCCATCAAATCCTGCCTGGCACTTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: ELSVHSLMLFSQ*TPSNPAWHLQV
Trigger: CACTTGCAAGTGCCAGGCAGGATTTGATGGAGTCCATTGTGAGAACAACATCAATGAGTGCACTGAGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp CGGGGAAGACGATCCATATGGTCTGTGATGTCTCGATaGGCAAAATGGTCTAACAGGATCTTGGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: RGRRSIWSVMSR*AKWSNRILAAS
Trigger: TGAAGCAGCCAAGATCCTGTTAGACCATTTTGCCAATCGAGACATCACAGACCATATGGATCGTCTTCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp GACCTTGCCAGCCAGGAGCACACAAGCAAGTATAACTCTCAAAATTaGGTGACTCTTTGCAAACAGCAGCATTCTCACAAGGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: DLASQEHTSKYNSQN*VTLCKQQHSHKGLG
Trigger: CCCCAAACCCTTGTGAGAATGCTGCTGTTTGCAAAGAGTCACCAAATTTTGAGAGTTATACTTGCTTGTGTGCTCCTGGCTGGCAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp TATTTGTCATACTTGCATGTCTTGCTGTTCCCCTGGCATTCAAAGTaGTCAAACAGGCACTCGACCGTGTTGCACAGCTCATCACACTGG +
Preference number: 6 (lower is better)
Translates to: YLSYLHVLLFPWHSK*SNRHSTVLHSSSHW
Trigger: CCAGTGTGATGAGCTGTGCAACACGGTCGAGTGCCTGTTTGACAACTTTGAATGCCAGGGGAACAGCAAGACATGCAAGTATGACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp GTTCCTCCTGCATTAATTTTCCTTCATGCTGCCTTATaGAGAAGGTACCTTGCTTCCCCTTTGCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: VPPALIFLHAAL*RRYLASPLPSA
Trigger: GGCAGAAGGCAAAGGGGAAGCAAGGTACCTTCTTCATAAGGCAGCATGAAGGAAAATTAATGCAGGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650638.1
CDS GCA 72 bp GAACGCAAGTACCTTTGTTTTTACATGGAGACCGACTaGAGAGATTCACCAGGGTCTGACAGTTTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: ERKYLCFYMETD*RDSPGSDSFSQ
Trigger: CTGGGAAAAACTGTCAGACCCTGGTGAATCTCTGCAGTCGGTCTCCATGTAAAAACAAAGGTACTTGCGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp GCACCCCTGGTCACAGTGGTTGTCTTTGAAGTGGTCTaGACAGTATTTGTCATACTTGCATGTCTTGCTGTT +
Preference number: 6 (lower is better)
Translates to: APLVTVVVFEVV*TVFVILACLAV
Trigger: AACAGCAAGACATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp CATCATTCATCCTGGCATCTAGATCAGTTACTCGGTTaGGAATCAGAATCTGGAAGACACCTTGGGCATCAG +
Preference number: 6 (lower is better)
Translates to: HHSSWHLDQLLG*ESESGRHLGHQ
Trigger: CTGATGCCCAAGGTGTCTTCCAGATTCTGATTCGCAACCGAGTAACTGATCTAGATGCCAGGATGAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CAGTATTTGTCATACTTGCATGTCTTGCTGTTCCCCTaGCATTCAAAGTTGTCAAACAGGCACTCGACCGTG +
Preference number: 6 (lower is better)
Translates to: QYLSYLHVLLFP*HSKLSNRHSTV
Trigger: CACGGTCGAGTGCCTGTTTGACAACTTTGAATGCCAGGGGAACAGCAAGACATGCAAGTATGACAAATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CTGTTGCACCCCTGGTCACAGTGGTTGTCTTTGAAGTaGTCTGCACAGTATTTGTCATACTTGCATGTCTTG +
Preference number: 6 (lower is better)
Translates to: LLHPWSQWLSLK*SAQYLSYLHVL
Trigger: CAAGACATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp GTGACTCTTTGCAAACAGCAGCATTCTCACAAGGGTTaGGGGAACAGGGAGCCAATACTGTCTGACAATTCT +
Preference number: 6 (lower is better)
Translates to: VTLCKQQHSHKG*GNREPILSDNS
Trigger: AGAATTGTCAGACAGTATTGGCTCCCTGTTCCCCAAACCCTTGTGAGAATGCTGCTGTTTGCAAAGAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp CCATTGAAACAGGAGCTCTCAGTGCACTCATTGATGTaGTTCTCACAATGGACTCCATCAAATCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: PLKQELSVHSLM*FSQWTPSNPAW
Trigger: CCAGGCAGGATTTGATGGAGTCCATTGTGAGAACAACATCAATGAGTGCACTGAGAGCTCCTGTTTCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp TCCTCACTGTTGCACCCCTGGTCACAGTGGTTGTCTTaGAAGTGGTCTGCACAGTATTTGTCATACTTGCAT +
Preference number: 6 (lower is better)
Translates to: SSLLHPWSQWLS*KWSAQYLSYLH
Trigger: ATGCAAGTATGACAAATACTGTGCAGACCACTTCAAAGACAACCACTGTGACCAGGGGTGCAACAGTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp CCATCATTCATCCTGGCATCTAGATCAGTTACTCGGTaGCGAATCAGAATCTGGAAGACACCTTGGGCATCA +
Preference number: 6 (lower is better)
Translates to: PSFILASRSVTR*RIRIWKTPWAS
Trigger: TGATGCCCAAGGTGTCTTCCAGATTCTGATTCGCAACCGAGTAACTGATCTAGATGCCAGGATGAATGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 90 bp CAAAATTTGGTGACTCTTTGCAAACAGCAGCATTCTCACAAGGGTTaGGGGAACAGGGAGCCAATACTGTCTGACAATTCTTGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: QNLVTLCKQQHSHKG*GNREPILSDNSCLC
Trigger: ACACAGGCAAGAATTGTCAGACAGTATTGGCTCCCTGTTCCCCAAACCCTTGTGAGAATGCTGCTGTTTGCAAAGAGTCACCAAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp AGGCAGCCAGAGAGAGCCATGCTTACGCTTTCGTTTTaGCATGATTACCCCCAGCAGAATAATAAACAGAAT +
Preference number: 6 (lower is better)
Translates to: RQPERAMLTLSF*HDYPQQNNKQN
Trigger: ATTCTGTTTATTATTCTGCTGGGGGTAATCATGGCAAAACGAAAGCGTAAGCATGGCTCTCTCTGGCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp ACTTACCTATATGACCTTGAGCAAGCAAGCTCCCTTTaGCTCAGCCTCCTCATGTGTAAAATGGCAATAGGA +
Preference number: 6 (lower is better)
Translates to: TYLYDLEQASSL*LSLLMCKMAIG
Trigger: TCCTATTGCCATTTTACACATGAGGAGGCTGAGGCAAAGGGAGCTTGCTTGCTCAAGGTCATATAGGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479412.2
CDS CAA 72 bp GTGCCACCATTGAAACAGGAGCTCTCAGTGCACTCATaGATGTTGTTCTCACAATGGACTCCATCAAATCCT +
Preference number: 6 (lower is better)
Translates to: VPPLKQELSVHS*MLFSQWTPSNP
Trigger: AGGATTTGATGGAGTCCATTGTGAGAACAACATCAATGAGTGCACTGAGAGCTCCTGTTTCAATGGTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS TCA 72 bp ATCATTGGAGAGGATGTGGTGTCGGAAACATACGTGTaGGGAGATTCTAGGGAATCAACAGGGGATAAAGTT +
Preference number: 6 (lower is better)
Translates to: IIGEDVVSETYV*GDSRESTGDKV
Trigger: AACTTTATCCCCTGTTGATTCCCTAGAATCTCCTCACACGTATGTTTCCGACACCACATCCTCTCCAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS GCA 72 bp ATTGATGTTGTTCTCACAATGGACTCCATCAAATCCTaGCTGGCACTTGCAAGTGTAACTGTTGACGTAGTC +
Preference number: 6 (lower is better)
Translates to: IDVVLTMDSIKS*LALASVTVDVV
Trigger: GACTACGTCAACAGTTACACTTGCAAGTGCCAGGCAGGATTTGATGGAGTCCATTGTGAGAACAACATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CCA 72 bp CATTTACAAAAGTCAGTTATGTCTCTACACTGGAGGTaGACTCTCTCACGCATAAACCTGCATGTTGTTGTG +
Preference number: 6 (lower is better)
Translates to: HLQKSVMSLHWR*TLSRINLHVVV
Trigger: CACAACAACATGCAGGTTTATGCGTGAGAGAGTCCACCTCCAGTGTAGAGACATAACTGACTTTTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp AGCCAGGAGCACACAAGCAAGTATAACTCTCAAAATTaGGTGACTCTTTGCAAACAGCAGCATTCTCACAAG +
Preference number: 6 (lower is better)
Translates to: SQEHTSKYNSQN*VTLCKQQHSHK
Trigger: CTTGTGAGAATGCTGCTGTTTGCAAAGAGTCACCAAATTTTGAGAGTTATACTTGCTTGTGTGCTCCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256646.7
CDS CAA 72 bp ATGAGTGAGTTCATGAGATCTGATGGTTTTATGTGTTaGGCAGTTCCTCCTGCATTAATTTTCCTTCATGCT +
Preference number: 6 (lower is better)
Translates to: MSEFMRSDGFMC*AVPPALIFLHA
Trigger: AGCATGAAGGAAAATTAATGCAGGAGGAACTGCCAAACACATAAAACCATCAGATCTCATGAACTCACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650638.1