RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOSTRIN (Homo sapiens)

Ensembl gene IDs: ENSG00000163072

Ensembl transcript IDs: ENST00000317647.12, ENST00000397206.6, ENST00000397209.6, ENST00000427068.1, ENST00000439509.5, ENST00000444448.6, ENST00000445023.6, ENST00000447264.2, ENST00000458381.6, ENST00000471833.1, ENST00000472260.1, ENST00000486873.2, ENST00000495202.1, ENST00000610364.4, ENST00000610378.4, ENST00000611498.4, ENST00000613802.1, ENST00000614172.1, ENST00000614613.1, ENST00000614842.4, ENST00000618893.1, ENST00000619846.4, ENST00000620000.1, ENST00000620516.4

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTaGACTCCGTCTGTTTCTGTGACACCAGGGGTTATACTGGATCAT +
Preference number: 1 (lower is better)
Translates to: VYQITLTSGKQLNPP*TPSVSVTPGVILDH
Trigger: ATGATCCAGTATAACCCCTGGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR TCA 90 bp GTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTTCTTGGAATTaGTCTGTGTTCCTCATCTCCCAGGCTCTGCTTGACCCCCTCATA +
Preference number: 1 (lower is better)
Translates to: VDLIGVLIACLSSWN*SVFLISQALLDPLI
Trigger: TATGAGGGGGTCAAGCAGAGCCTGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACACCAATGAGATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR GCA 90 bp TCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTaGTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAA +
Preference number: 1 (lower is better)
Translates to: SVATQIQRKKTSKSH*CCLPDNSDFRQAAE
Trigger: TTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR TCA 90 bp GGCTGTGGGTTTGTCAGAGATATCCTACCATCCCCTAATTTGGGTTaGTCTCATTGGTGTCTTGATTGCCTGTCTCTCTTCTTGGAATTG +
Preference number: 1 (lower is better)
Translates to: GCGFVRDILPSPNLG*SHWCLDCLSLFLEL
Trigger: CAATTCCAAGAAGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGACAAACCCACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR CCA 90 bp ATATTGGCTGTGGGTTTGTCAGAGATATCCTACCATCCCCTAATTTaGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTTCTTGG +
Preference number: 1 (lower is better)
Translates to: ILAVGLSEISYHPLI*VDLIGVLIACLSSW
Trigger: CCAAGAAGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGACAAACCCACAGCCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR-3UTR CCA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCCACCAGGGGTTATACTaGATCATCTCTAGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSHQGLY*IISRVS
Trigger: GGAGACCCTAGAGATGATCCAGTATAACCCCTGGTG...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR TCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCACCACACTGTATTGTTaGTTACCGAGTGTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTTTLYC*LPSVKV
Trigger: TACCTTCACACTCGGTAATCAACAATACAGTGTGGT...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR CCA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCCACCAGGGGTTATACTaGATCATCTCTAGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCHQGLY*IISRVS
Trigger: GGAGACCCTAGAGATGATCCAGTATAACCCCTGGTG...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR-3UTR TCA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCACTCCGTCTGTTTCTGTaGCACCAGGGGTTATACTGG +
Preference number: 2 (lower is better)
Translates to: CLDCLSLFLELICVPHLPLRLFL*HQGLYW
Trigger: CCAGTATAACCCCTGGTGTCACAGAAACAGACGGAG...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR-3UTR TCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAACCACACTGTATTGTTaGTTACCGAGTGTGAAGGTA +
Preference number: 2 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQATTLYC*LPSVKV
Trigger: TACCTTCACACTCGGTAATCAACAATACAGTGTGGT...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR GCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAATCATGAATGCAAAGTaGTGTGACATGCAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAIMNAK*CDMQVE
Trigger: TTCTACCTGCATGTCACAGCACTTTGCATTCATGAT...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR TCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTCTCTCTTCTTGGAATTaGTCTGTGTTCCTCATCTCC +
Preference number: 2 (lower is better)
Translates to: SEISYHPLIWVDLIGVLILSSWN*SVFLIS
Trigger: GGAGATGAGGAACACAGATCAATTCCAAGAAGAGAG...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR-3UTR GCA 90 bp TACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTATCATGAATGCAAAGTaGTGTGACATGCAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: YHPLIWVDLIGVLIACLSIMNAK*CDMQVE
Trigger: TTCTACCTGCATGTCACAGCACTTTGCATTCATGAT...AGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR-3UTR CCA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTACAGTTACCCAACGTTaGCTTCTTCCTCGTTATGGT +
Preference number: 2 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEITVTQR*LLPRYG
Trigger: ACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
3UTR-3UTR CCA 90 bp ACAGTTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTCAGAGTCACAAATGTaGAGTCGTTTTTGTCATCCT +
Preference number: 2 (lower is better)
Translates to: TVTQRWLLPRYGIHITKCSESQM*SRFCHP
Trigger: AGGATGACAAAAACGACTCCACATTTGTGACTCTGA...ACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
3UTR-3UTR TCA 90 bp ACAGTTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTAGTATTCCATTGCAATaGGTTATCGTGGTCCATATA +
Preference number: 2 (lower is better)
Translates to: TVTQRWLLPRYGIHITKCSIPLQ*VIVVHI
Trigger: TATATGGACCACGATAACTCATTGCAATGGAATACT...ACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
3UTR CCA 72 bp ATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTaGACTCCGTCTGTTTCTGTGACACCAGGGGTTATA +
Preference number: 3 (lower is better)
Translates to: ITLTSGKQLNPP*TPSVSVTPGVI
Trigger: TATAACCCCTGGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR CAA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCTTGAACCACACTGTATaGTTGATTACCGAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTLNHTV*LITECE
Trigger: TTCACACTCGGTAATCAACAATACAGTGTGGTTCAA...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTTTGAACCACACTGTATaGTTGATTACCGAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCLNHTV*LITECE
Trigger: TTCACACTCGGTAATCAACAATACAGTGTGGTTCAA...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR CAA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
3UTR-3UTR CAA 90 bp TCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: SVATQIQRKKTSKSHCCCNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...ACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR GCA 72 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTaGTGTTGTCTACCAGATAACTCTGACTTCAGGCAA +
Preference number: 3 (lower is better)
Translates to: TQIQRKKTSKSH*CCLPDNSDFRQ
Trigger: TTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR-3UTR CAA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCAAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: CLDCLSLFLELICVPHLPNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
3UTR GCA 72 bp GACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATTaGTTTGCCAAGTTTTTGATGCAGGTCCGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: DLISRFYCFQFN*FAKFLMQVRCG
Trigger: TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439509.5
3UTR TCA 72 bp TCTATCTTGAATTTGCTCTCTAGTATTCCATTGCAATaGGTTATCGTGGTCCATATAAAACAAGTTACTAGG +
Preference number: 3 (lower is better)
Translates to: SILNLLSSIPLQ*VIVVHIKQVTR
Trigger: CCTAGTAACTTGTTTTATATGGACCACGATAACTCATTGCAATGGAATACTAGAGAGCAAATTCAAGATAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR TCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACCTCCCAGGCTCTGCTTaGCCCCCTCATAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDLPGSA*PPHRPA
Trigger: AGCAGGCCTATGAGGGGGTCAAGCAGAGCCTGGGAG...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCGGATTTCATTCCCTCTaGGGCCCAGGCCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFGFHSL*GPGPGT
Trigger: AGTGCCTGGGCCTGGGCCTCAGAGGGAATGAAATCC...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR TCA 90 bp ATTCCCTCTGAGGCCCAGGCCCAGGCACTGCTAACACAACTTTTTCTCGTGTTCGCAGTCCTAGCTACTTaGGAGGCTGAGGCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: IPSEAQAQALLTQLFLVFAVLAT*EAEARG
Trigger: TCCTCTCGCCTCAGCCTCTCAAGTAGCTAGGACTGC...GAACACGAGAAAAAGTTGTGTTAGCAGTGCCTGGGCCTGGGCCTCAGAGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR TCA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTTGCAAAGTCTGCTGCTaGGCTGGGCTGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSCKVCC*AGLHQG
Trigger: CCCCTGGTGCAGCCCAGCTCAGCAGCAGACTTTGCA...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCCTCCCAGGCTCTGCTTaGCCCCCTCATAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCLPGSA*PPHRPA
Trigger: AGCAGGCCTATGAGGGGGTCAAGCAGAGCCTGGGAG...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCGATGCAGGTCCGCTGTaGATTTCATTCCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTDAGPL*ISFPLR
Trigger: CCTCAGAGGGAATGAAATCCACAGCGGACCTGCATC...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR TCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTACCAGGGGCTGGAGTTaGAGAACCTGGATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCTRGWS*RTWIAL
Trigger: CAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGT...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDEPGLL*PPEDAL
Trigger: CAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTC...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCAGGCATATAGGCAGATaGTGTGGGTTACCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTRHIGR*CGLPGS
Trigger: GCTACCAGGTAACCCACAGCATCTGCCTATATGCCT...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR TCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTTGCTGATGGCACAGTaGATCTGCGTGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFLLMAQ*ICVWHV
Trigger: CACATGCCACACGCAGATTCACTGTGCCATCAGCAA...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACCAAGGATGGCTGGGTTaGGGTCTTTGCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDQGWLG*GLCSSS
Trigger: AGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTG...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCATGCAAAGTCTGCTGCTaGGCTGGGCTGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLDCLSLFLELICVPHLPCKVCC*AGLHQG
Trigger: CCCCTGGTGCAGCCCAGCTCAGCAGCAGACTTTGCA...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTCTCCGTCTGTTTCTGTaGCACCAGGGGTTATACTGG +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCLRLFL*HQGLYW
Trigger: CCAGTATAACCCCTGGTGTCACAGAAACAGACGGAG...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCCTGCCCACCAGAAGATaGCTTGCTCACAATATTCTC +
Preference number: 4 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTLPTRR*LAHNIL
Trigger: GAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAG...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACTCTGCGTGTGGCATGTaGTCAGGGTTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDSACGM*SGFGQK
Trigger: TTTTTGGCCAAACCCTGACCACATGCCACACGCAGA...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CCA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCAGGTTGGGTGTGTCCTaGACTTCCGGGATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSRLGVS*TSGIQR
Trigger: CCTTTGAATCCCGGAAGTCCAGGACACACCCAACCT...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR TCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTCAAGGATGGCTGGGTTaGGGTCTTTGCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCQGWLG*GLCSSS
Trigger: AGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTG...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDVGPSC*NVSGFC
Trigger: ACAAAAGCCAGACACATTTCAACATGAGGGACCCAC...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR GCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACCTGCCCACCAGAAGATaGCTTGCTCACAATATTCTC +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDLPTRR*LAHNIL
Trigger: GAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAG...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCCACCAGGGGTTATACTaGATCATCTCTAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFHQGLY*IISRVS
Trigger: GGAGACCCTAGAGATGATCCAGTATAACCCCTGGTG...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTCACTGTAATCAAGGTTaGGTGTGTCCTGGACTTCCG +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCHCNQG*VCPGLP
Trigger: CGGAAGTCCAGGACACACCCAACCTTGATTACAGTG...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR TCA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTTGCTGATGGCACAGTaGATCTGCGTGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCLLMAQ*ICVWHV
Trigger: CACATGCCACACGCAGATTCACTGTGCCATCAGCAA...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTGCAAAGTCTGCTGCTaGGCTGGGCTGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVCKVCC*AGLHQG
Trigger: CCCCTGGTGCAGCCCAGCTCAGCAGCAGACTTTGCA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGAGAAAGTAAAGAACTaGTCTGGGTCAAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSEKVKN*SGSRRP
Trigger: TGGCCGTCTTGACCCAGAGCAGTTCTTTACTTTCTC...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR CCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCCGGACAATCTGTCAGTaGGTCCCTCATGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFRTICQ*VPHVEM
Trigger: CATTTCAACATGAGGGACCCACTGACAGATTGTCCG...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CCA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTGATGCAGGTCCGCTGTaGATTTCATTCCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSDAGPL*ISFPLR
Trigger: CCTCAGAGGGAATGAAATCCACAGCGGACCTGCATC...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACTACTACAAGGATGGCTaGGTTGAGGTCTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDYYKDG*VEVFAQ
Trigger: TTGAGCAAAGACCTCAACCCAGCCATCCTTGTAGTA...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp ATTCCCTCTGAGGCCCAGGCCCAGGCACTGCTAACACAACTTTTTCTCGTGTTCGCTGAAGAACAGATGTaGCCTGTTTGCAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: IPSEAQAQALLTQLFLVFAEEQM*PVCRNS
Trigger: AGAATTTCTGCAAACAGGTCACATCTGTTCTTCAGC...GAACACGAGAAAAAGTTGTGTTAGCAGTGCCTGGGCCTGGGCCTCAGAGGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR TCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCTTGGCCTTAATTTGCTaGTTCCAGTTGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTLALIC*FQLLMT
Trigger: TGTCATTAGCAACTGGAATCAGCAAATTAAGGCCAA...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACGCCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDAFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGC...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATACCAGGGGCTGGAGTTaGAGAACCTGGATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDTRGWS*RTWIAL
Trigger: CAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGT...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCCAGTGCCCTACCAGTaGTTGGGAAGGGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVPVPYQ*LGRAAC
Trigger: GCATGCAGCCCTTCCCAAGCACTGGTAGGGCACTGG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACTACCATCCCCTAATTTaGGTTGATCTCATTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDYHPLI*VDLIGV
Trigger: GACACCAATGAGATCAACCCAAATTAGGGGATGGTA...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGAGTAAAGAACTGCTCTaGGTCAAGACGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQSKELL*VKTASV
Trigger: CACACTGGCCGTCTTGACCCAGAGCAGTTCTTTACT...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR TCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGCTGAAGAACAGATGTaGCCTGTTTGCAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCAEEQM*PVCRNS
Trigger: AGAATTTCTGCAAACAGGTCACATCTGTTCTTCAGC...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR TCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCATTTTGTCAGTTTATTaGGGAGCTTCCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFILSVY*GASASP
Trigger: AGGAGAAGCGGAAGCTCCTCAATAAACTGACAAAAT...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGCCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCAFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGC...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATGCAAAGTCTGCTGCTaGGCTGGGCTGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRCKVCC*AGLHQG
Trigger: CCCCTGGTGCAGCCCAGCTCAGCAGCAGACTTTGCA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTGCAAAGTCTGCTGCTaGGCTGGGCTGCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFCKVCC*AGLHQG
Trigger: CCCCTGGTGCAGCCCAGCTCAGCAGCAGACTTTGCA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCATCTCATTGGTGTCTTaGTTGCCTGTCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFISLVS*LPVSLL
Trigger: AAGAAGAGAGACAGGCAATCAAGACACCAATGAGAT...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTTCCCCTAATTTGGGTTaGTCTCATTGGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCSPNLG*SHWCLD
Trigger: ATCAAGACACCAATGAGATCAACCCAAATTAGGGGA...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp AAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAGAGGGCAGGATCCTaGGTCCTTGCAACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: KKTSKSHCCCLPDNSDFRQRAGS*VLATRV
Trigger: CACTCTTGTTGCAAGGACTCAGGATCCTGCCCTCTG...CCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR GCA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGCTAATTTCCAGGTTTaGCCTTTGCTGAAGAACAGA +
Preference number: 4 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCANFQV*PLLKNR
Trigger: TCTGTTCTTCAGCAAAGGGCAAACCTGGAAATTAGC...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp TCTGAGGCCCAGGCCCAGGCACTGCTAACACAACTTTTTCTCGTGTTCTGTAATATGCTTTGCTCAGCTTaGTTGCCAGTTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SEAQAQALLTQLFLVFCNMLCSA*LPVSEV
Trigger: GACTTCAGAAACTGGCAAGCAAGCTGAGCAAAGCAT...ATTACAGAACACGAGAAAAAGTTGTGTTAGCAGTGCCTGGGCCTGGGCCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR GCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCTACAAGCTGGAAAAGTaGTTCATGTTTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTYKLEK*FMFLGT
Trigger: AGTACCAAGAAACATGAAGCACTTTTCCAGCTTGTA...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTTGAAGAACCTGGATTaGTCTGCCCACCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCLKNLD*SAHQKM
Trigger: CATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAA...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCCAGAGTCTTGTTTTATaGCTTTGTAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFQSLVL*LCSCVA
Trigger: GGCAACACAGCTACAAAGGCATAAAACAAGACTCTG...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGGTGGGCTGTCTGCATaGCCAGTGCCCTACCAGTGC +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFGGLSA*PVPYQC
Trigger: GCACTGGTAGGGCACTGGGCATGCAGACAGCCCACC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CCA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCCGGACAATCTGTCAGTaGGTCCCTCATGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCRTICQ*VPHVEM
Trigger: CATTTCAACATGAGGGACCCACTGACAGATTGTCCG...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317647.12
CDS-3UTR CCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACGAGCTTTCTACAAGCTaGAAAAGTGCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDELSTS*KSASCF
Trigger: GAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTC...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCACACCAGGGGTTATACTaGATCATCTCTAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAHQGLY*IISRVS
Trigger: GGAGACCCTAGAGATGATCCAGTATAACCCCTGGTG...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGACCAGGGGCTGGAGTTaGAGAACCTGGATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLTRGWS*RTWIAL
Trigger: CAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTCTCTTCTTGGAATTaGTCTGTGTTCCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQLSSWN*SVFLIS
Trigger: GGAGATGAGGAACACAGATCAATTCCAAGAAGAGAG...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCATGCTTTGCTCAGCTTaGTTGCCAGTTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCMLCSA*LPVSEV
Trigger: GACTTCAGAAACTGGCAAGCAAGCTGAGCAAAGCAT...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317647.12
CDS-3UTR GCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGATGCTTTGCTCAGCTTaGTTGCCAGTTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQMLCSA*LPVSEV
Trigger: GACTTCAGAAACTGGCAAGCAAGCTGAGCAAAGCAT...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCTGCTTCCAATTCAATTaGTTTGCCAAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTCFQFN*FAKFLM
Trigger: CATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCA...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACTACAAGCTGGAAAAGTaGTTCATGTTTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDYKLEK*FMFLGT
Trigger: AGTACCAAGAAACATGAAGCACTTTTCCAGCTTGTA...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCATCATGAATGCAAAGTaGTGTGACATGCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFIMNAK*CDMQVE
Trigger: TTCTACCTGCATGTCACAGCACTTTGCATTCATGAT...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCATCATGAATGCAAAGTaGTGTGACATGCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSIMNAK*CDMQVE
Trigger: TTCTACCTGCATGTCACAGCACTTTGCATTCATGAT...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTCCTGCTGTGTTCTGTTaGCACCCAAATCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: YHPLIWVDLIGVLIACLSPAVFC*HPNPEE
Trigger: TTCCTCTGGATTTGGGTGGCAACAGAACACAGCAGG...AGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCAATGCCCTCCCTCTTTaGTTATCCAAAGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSNALPL*LSKELD
Trigger: ATCAAGTTCTTTGGATAAGCAAAGAGGGAGGGCATT...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR CCA 90 bp TATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGATGCAGGTCCGCTGTGGAGATGCAGGTCCGCTGTaGATTTCATTCCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: YCFQFNCFAKFLMQVRCGDAGPL*ISFPLR
Trigger: CCTCAGAGGGAATGAAATCCACAGCGGACCTGCATC...TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CCA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCGAGCTTTCTACAAGCTaGAAAAGTGCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFELSTS*KSASCF
Trigger: GAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTC...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATTCTGCGTGTGGCATGTaGTCAGGGTTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDSACGM*SGFGQK
Trigger: TTTTTGGCCAAACCCTGACCACATGCCACACGCAGA...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CCA 90 bp AAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGAGGAAGTCCCAGCCCTaGACTTTCATCCCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KKTSKSHCCCLPDNSDFRRKSQP*TFIPFV
Trigger: CACAAACGGGATGAAAGTCCAGGGCTGGGACTTCCT...CCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR TCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCTGATGGCACAGTaGATCTGCGTGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLLMAQ*ICVWHV
Trigger: CACATGCCACACGCAGATTCACTGTGCCATCAGCAA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTTGCTGATGGCACAGTaGATCTGCGTGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLLMAQ*ICVWHV
Trigger: CACATGCCACACGCAGATTCACTGTGCCATCAGCAA...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCTCCGTCTGTTTCTGTaGCACCAGGGGTTATACTGG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLRLFL*HQGLYW
Trigger: CCAGTATAACCCCTGGTGTCACAGAAACAGACGGAG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTGCTAATTTCCAGGTTTaGCCTTTGCTGAAGAACAGA +
Preference number: 4 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSANFQV*PLLKNR
Trigger: TCTGTTCTTCAGCAAAGGGCAAACCTGGAAATTAGC...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCCCAATTCAATTGCTTTaGCAAGTTTTTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSPIQLL*QVFDAG
Trigger: ACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGG...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACTGCTTCCAATTCAATTaGTTTGCCAAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDCFQFN*FAKFLM
Trigger: CATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCA...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATCTGCCCACCAGAAGATaGCTTGCTCACAATATTCTC +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDLPTRR*LAHNIL
Trigger: GAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAG...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVEPGLL*PPEDAL
Trigger: CAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTC...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLEPGLL*PPEDAL
Trigger: CAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIEPGLL*PPEDAL
Trigger: CAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTC...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATTTGAAGAACCTGGATTaGTCTGCCCACCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDLKNLD*SAHQKM
Trigger: CATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAA...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTCATTGGTGTCTTGATTaGCTGTCTCTCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSHWCLD*LSLFLE
Trigger: TTCCAAGAAGAGAGACAGGCAATCAAGACACCAATG...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGATGCAGGTCCGCTGTaGATTTCATTCCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLDAGPL*ISFPLR
Trigger: CCTCAGAGGGAATGAAATCCACAGCGGACCTGCATC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCATACTACAAGGATGGCTaGGTTGAGGTCTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAYYKDG*VEVFAQ
Trigger: TTGAGCAAAGACCTCAACCCAGCCATCCTTGTAGTA...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGTTGGCCTTAATTTGCTaGTTCCAGTTGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQLALIC*FQLLMT
Trigger: TGTCATTAGCAACTGGAATCAGCAAATTAAGGCCAA...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAAFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGC...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR TCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTCAAGGATGGCTGGGTTaGGGTCTTTGCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIQGWLG*GLCSSS
Trigger: AGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTG...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCAAGGATGGCTGGGTTaGGGTCTTTGCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVQGWLG*GLCSSS
Trigger: AGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAACCAGGGGCTGGAGTTaGAGAACCTGGATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRTRGWS*RTWIAL
Trigger: CAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCACCAGGGGCTGGAGTTaGAGAACCTGGATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFTRGWS*RTWIAL
Trigger: CAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATCTCTCTTCTTGGAATTaGTCTGTGTTCCTCATCTCC +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDLSSWN*SVFLIS
Trigger: GGAGATGAGGAACACAGATCAATTCCAAGAAGAGAG...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTTATCCAAAGAACTTaGTCACTGGAGGTTACAACA +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQLIQRT*SLEVTT
Trigger: TGTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAG...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACAGAGGGCAGGATCCTaGGTCCTTGCAACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRQRAGS*VLATRV
Trigger: CACTCTTGTTGCAAGGACTCAGGATCCTGCCCTCTG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR GCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGTTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQFSVID*LELSTS
Trigger: GCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAA...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCAGAGTCTTGTTTTATaGCTTTGTAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SVATQIQRKKTSKSHCCCQSLVL*LCSCVA
Trigger: GGCAACACAGCTACAAAGGCATAAAACAAGACTCTG...ACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTATCATGAATGCAAAGTaGTGTGACATGCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSIMNAK*CDMQVE
Trigger: TTCTACCTGCATGTCACAGCACTTTGCATTCATGAT...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTACATCTAAGTCCCACTaGTGTTGTCTACCAGATAAC +
Preference number: 4 (lower is better)
Translates to: SVATQIQRKKTSKSHCCCTSKSH*CCLPDN
Trigger: GTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT...ACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAACATCTAAGTCCCACTaGTGTTGTCTACCAGATAAC +
Preference number: 4 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQATSKSH*CCLPDN
Trigger: GTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAGGATCCTGAGTCCTTaGAACAAGAGTGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLRILSP*NKSGEE
Trigger: CTCCTCTCCACTCTTGTTGCAAGGACTCAGGATCCT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAGGATCCTGAGTCCTTaGAACAAGAGTGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVRILSP*NKSGEE
Trigger: CTCCTCTCCACTCTTGTTGCAAGGACTCAGGATCCT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAGGCATATAGGCAGATaGTGTGGGTTACCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVRHIGR*CGLPGS
Trigger: GCTACCAGGTAACCCACAGCATCTGCCTATATGCCT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000458381.6
ENST00000610364.4
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTGTCTGCATGCCCAGTaGCCTACCAGTGCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFCLHAQ*PTSAWE
Trigger: TTCCCAAGCACTGGTAGGGCACTGGGCATGCAGACA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTCTGCGTGTGGCATGTaGTCAGGGTTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVSACGM*SGFGQK
Trigger: TTTTTGGCCAAACCCTGACCACATGCCACACGCAGA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCTCAAGGTTCTGCTTTaGCAGGCAGTGCAGAACAGA +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLKVLL*QAVQNR
Trigger: TCTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR TCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATATTTTGTCAGTTTATTaGGGAGCTTCCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDILSVY*GASASP
Trigger: AGGAGAAGCGGAAGCTCCTCAATAAACTGACAAAAT...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATTGCTGATGGCACAGTaGATCTGCGTGTGGCATGTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLLMAQ*ICVWHV
Trigger: CACATGCCACACGCAGATTCACTGTGCCATCAGCAA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCAACCACACTGTATTGTTaGTTACCGAGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: CLDCLSLFLELICVPHLPTTLYC*LPSVKV
Trigger: TACCTTCACACTCGGTAATCAACAATACAGTGTGGT...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp TACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTACCACACTGTATTGTTaGTTACCGAGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: YHPLIWVDLIGVLIACLSTTLYC*LPSVKV
Trigger: TACCTTCACACTCGGTAATCAACAATACAGTGTGGT...AGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATTCCCCTAATTTGGGTTaGTCTCATTGGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDSPNLG*SHWCLD
Trigger: ATCAAGACACCAATGAGATCAACCCAAATTAGGGGA...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLVGPSC*NVSGFC
Trigger: ACAAAAGCCAGACACATTTCAACATGAGGGACCCAC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR TCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTCAAGACGGCCAGTGTaGGATAGTGAGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVSRRPV*DSENDF
Trigger: GAAGTCATTCTCACTATCTCACACTGGCCGTCTTGA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR TCA 90 bp AAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGAGCTCCAGAATGCTCTaGAGACAGACTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: KKTSKSHCCCLPDNSDFRSSRML*RQTEQS
Trigger: ACTTTGTTCAGTCTGTCTTCAGAGCATTCTGGAGCT...CCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR GCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCCAATTCAATTGCTTTaGCAAGTTTTTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQPIQLL*QVFDAG
Trigger: ACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGG...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR GCA 90 bp TCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTTTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: SVATQIQRKKTSKSHCCCFSVID*LELSTS
Trigger: GCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAA...ACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGTCTCTCTTTATCCATTaGACTGTTAGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQSLFIH*TVRIFF
Trigger: GAAGAAGATCCTAACAGTGCAATGGATAAAGAGAGA...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFREPGLL*PPEDAL
Trigger: CAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFEPGLL*PPEDAL
Trigger: CAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTTGAAGAACCTGGATTaGTCTGCCCACCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLKNLD*SAHQKM
Trigger: CATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAA...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAAGAACCTGGATTaGTCTGCCCACCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLKNLD*SAHQKM
Trigger: CATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGAGAAAGTAAAGAACTaGTCTGGGTCAAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLEKVKN*SGSRRP
Trigger: TGGCCGTCTTGACCCAGAGCAGTTCTTTACTTTCTC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCGGACAATCTGTCAGTaGGTCCCTCATGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVRTICQ*VPHVEM
Trigger: CATTTCAACATGAGGGACCCACTGACAGATTGTCCG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAAGGAAGTCCCAGCCCTaGACTTTCATCCCGTTTGTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRRKSQP*TFIPFV
Trigger: CACAAACGGGATGAAAGTCCAGGGCTGGGACTTCCT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGGTTGGGTGTGTCCTaGACTTCCGGGATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFRLGVS*TSGIQR
Trigger: CCTTTGAATCCCGGAAGTCCAGGACACACCCAACCT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAATTCTTCCCTTCTGGTaGGCTGTCTGCATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRILPFW*AVCMPS
Trigger: ACTGGGCATGCAGACAGCCCACCAGAAGGGAAGAAT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
3UTR CAA 72 bp GGACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATaGCTTTGCCAAGTTTTTGATGCAGGTCCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLDKSVLLLPIQ*LCQVFDAGPLW
Trigger: CCACAGCGGACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACAAGGATGGCTGGGTTaGGGTCTTTGCTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRQGWLG*GLCSSS
Trigger: AGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAGCTCCAGAATGCTCTaGAGACAGACTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVSSRML*RQTEQS
Trigger: ACTTTGTTCAGTCTGTCTTCAGAGCATTCTGGAGCT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000458381.6
ENST00000610364.4
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAGCTCCAGAATGCTCTaGAGACAGACTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLSSRML*RQTEQS
Trigger: ACTTTGTTCAGTCTGTCTTCAGAGCATTCTGGAGCT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000458381.6
ENST00000610364.4
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCATGCTTTGCTCAGCTTaGTTGCCAGTTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVMLCSA*LPVSEV
Trigger: GACTTCAGAAACTGGCAAGCAAGCTGAGCAAAGCAT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGATGCTTTGCTCAGCTTaGTTGCCAGTTTCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLMLCSA*LPVSEV
Trigger: GACTTCAGAAACTGGCAAGCAAGCTGAGCAAAGCAT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR GCA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCATCTCTCTTTATCCATTaGACTGTTAGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQASLFIH*TVRIFF
Trigger: GAAGAAGATCCTAACAGTGCAATGGATAAAGAGAGA...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp AAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGACATCTAAGTCCCACTaGTGTTGTCTACCAGATAAC +
Preference number: 4 (lower is better)
Translates to: KKTSKSHCCCLPDNSDFRTSKSH*CCLPDN
Trigger: GTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT...CCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACCTGCTGTGTTCTGTTaGCACCCAAATCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRPAVFC*HPNPEE
Trigger: TTCCTCTGGATTTGGGTGGCAACAGAACACAGCAGG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAAGGCATATAGGCAGATaGTGTGGGTTACCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRRHIGR*CGLPGS
Trigger: GCTACCAGGTAACCCACAGCATCTGCCTATATGCCT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000458381.6
ENST00000610364.4
CDS-3UTR CCA 90 bp TACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTGAGCTTTCTACAAGCTaGAAAAGTGCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: YHPLIWVDLIGVLIACLSELSTS*KSASCF
Trigger: GAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTC...AGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATCTGCGTGTGGCATGTaGTCAGGGTTTGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRSACGM*SGFGQK
Trigger: TTTTTGGCCAAACCCTGACCACATGCCACACGCAGA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTACTACAAGGATGGCTaGGTTGAGGTCTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVYYKDG*VEVFAQ
Trigger: TTGAGCAAAGACCTCAACCCAGCCATCCTTGTAGTA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp ACAGTTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTACAGTTACCCAACGTTaGCTTCTTCCTCGTTATGGT +
Preference number: 4 (lower is better)
Translates to: TVTQRWLLPRYGIHITKCTVTQR*LLPRYG
Trigger: ACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT...ACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAGGTTACAACAATCTTaGGTAGCTACCACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVRLQQS*VATTGL
Trigger: TAGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAAGTAAAGAACTGCTCTaGGTCAAGACGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRSKELL*VKTASV
Trigger: CACACTGGCCGTCTTGACCCAGAGCAGTTCTTTACT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACACTGTAATCAAGGTTaGGTGTGTCCTGGACTTCCG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRHCNQG*VCPGLP
Trigger: CGGAAGTCCAGGACACACCCAACCTTGATTACAGTG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR TCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCTGAAGAACAGATGTaGCCTGTTTGCAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIAEEQM*PVCRNS
Trigger: AGAATTTCTGCAAACAGGTCACATCTGTTCTTCAGC...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317647.12
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGCTGAAGAACAGATGTaGCCTGTTTGCAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLAEEQM*PVCRNS
Trigger: AGAATTTCTGCAAACAGGTCACATCTGTTCTTCAGC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000458381.6
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGATTTTGTCAGTTTATTaGGGAGCTTCCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLILSVY*GASASP
Trigger: AGGAGAAGCGGAAGCTCCTCAATAAACTGACAAAAT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGCCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLAFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCACCACACTGTATTGTTaGTTACCGAGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVTTLYC*LPSVKV
Trigger: TACCTTCACACTCGGTAATCAACAATACAGTGTGGT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGATCTCATTGGTGTCTTaGTTGCCTGTCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLISLVS*LPVSLL
Trigger: AAGAAGAGAGACAGGCAATCAAGACACCAATGAGAT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRVGPSC*NVSGFC
Trigger: ACAAAAGCCAGACACATTTCAACATGAGGGACCCAC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTTTTGCTCAGCTTGCTTaGCAGTTTCTGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIFAQLA*QFLKSF
Trigger: AAAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAA...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317647.12
CDS-3UTR GCA 90 bp AAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGTTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: KKTSKSHCCCLPDNSDFRFSVID*LELSTS
Trigger: GCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAA...CCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACTGCCCACCAGAAGATaGCTTGCTCACAATATTCTC +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLPTRR*LAHNIL
Trigger: GAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCTGCCCACCAGAAGATaGCTTGCTCACAATATTCTC +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLPTRR*LAHNIL
Trigger: GAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTTGAAGAACCTGGATTaGTCTGCCCACCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLKNLD*SAHQKM
Trigger: CATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCAGAGTCTTGTTTTATaGCTTTGTAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLQSLVL*LCSCVA
Trigger: GGCAACACAGCTACAAAGGCATAAAACAAGACTCTG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCAGAGTCTTGTTTTATaGCTTTGTAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVQSLVL*LCSCVA
Trigger: GGCAACACAGCTACAAAGGCATAAAACAAGACTCTG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTCATTGGTGTCTTGATTaGCTGTCTCTCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIHWCLD*LSLFLE
Trigger: TTCCAAGAAGAGAGACAGGCAATCAAGACACCAATG...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp GTACATTTAGGACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCGCAGCAAGCTATAATTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VHLGLDKSVLLLPIQLLCAASYN*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAATTATAGCTTGCTGC...GCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTCCTAAATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTCTCCAGCTCCAGAATaGTCTGAAGACAGACTGAAC +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFSPAPE*SEDRLN
Trigger: GTTCAGTCTGTCTTCAGAGCATTCTGGAGCTGGAGA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000458381.6
ENST00000610364.4
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACGGACAATCTGTCAGTaGGTCCCTCATGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRRTICQ*VPHVEM
Trigger: CATTTCAACATGAGGGACCCACTGACAGATTGTCCG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTTACCATCCCCTAATTTaGGTTGATCTCATTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIYHPLI*VDLIGV
Trigger: GACACCAATGAGATCAACCCAAATTAGGGGATGGTA...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTTGGCCTTAATTTGCTaGTTCCAGTTGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLALIC*FQLLMT
Trigger: TGTCATTAGCAACTGGAATCAGCAAATTAAGGCCAA...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp ATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGATGCAGGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: ISRFYCFQFNCFAKFLMQVGPSC*NVSGFC
Trigger: ACAAAAGCCAGACACATTTCAACATGAGGGACCCAC...CTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR TCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCTTATCCAAAGAACTTaGTCACTGGAGGTTACAACA +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLIQRT*SLEVTT
Trigger: TGTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGATGCAGGTCCGCTGTGGACCAATTCAATTGCTTTaGCAAGTTTTTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: YCFQFNCFAKFLMQVRCGPIQLL*QVFDAG
Trigger: ACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGG...TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLFSVID*LELSTS
Trigger: GCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAA...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp AACAAGTTACTAGGTAGACATCAGAGTCACAAATGTGGAGTCGTTTTTGTCATCCTTCACAGTCTGACATaGCTAACTTCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: NKLLGRHQSHKCGVVFVILHSLT*LTSSLS
Trigger: AGACAAGGAAGAAGTTAGGCATGTCAGACTGTGAAG...GATGACAAAAACGACTCCACATTTGTGACTCTGATGTCTACCTAGTAACTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp TTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTTTCCTTCACAGTCTGACATaGCTAACTTCTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPNVGFFLVMVFTSLNVFLHSLT*LTSSLS
Trigger: AGACAAGGAAGAAGTTAGGCATGTCAGACTGTGAAG...GAAAACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAATGCCCTCCCTCTTTaGTTATCCAAAGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVNALPL*LSKELD
Trigger: ATCAAGTTCTTTGGATAAGCAAAGAGGGAGGGCATT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGTTTTTACCCTCTTGTaGTTCAGTTTATCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLVFTLL*FSLSLG
Trigger: TCCCAGAGATAAACTGAAGCACAAGAGGGTAAAAAC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATATTTCTCAAGGTTCTaGTTTGGCAGGCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRYFSRF*FGRQCR
Trigger: TCTGCACTGCCTGCCAAAGCAGAACCTTGAGAAATA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CCA 90 bp ATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGATGCAGCGGACAATCTGTCAGTaGGTCCCTCATGTTGAAATG +
Preference number: 4 (lower is better)
Translates to: ISRFYCFQFNCFAKFLMQRTICQ*VPHVEM
Trigger: CATTTCAACATGAGGGACCCACTGACAGATTGTCCG...CTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGAGCTTTCTACAAGCTaGAAAAGTGCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLELSTS*KSASCF
Trigger: GAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATACTACAAGGATGGCTaGGTTGAGGTCTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRYYKDG*VEVFAQ
Trigger: TTGAGCAAAGACCTCAACCCAGCCATCCTTGTAGTA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTACTACAAGGATGGCTaGGTTGAGGTCTTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFYYKDG*VEVFAQ
Trigger: TTGAGCAAAGACCTCAACCCAGCCATCCTTGTAGTA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAAGGTTACAACAATCTTaGGTAGCTACCACAGGGCTA +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRRLQQS*VATTGL
Trigger: TAGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACTCATCCCCCAAACATaGGTATTTCTCAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLIPQT*VFLKVL
Trigger: CAGAACCTTGAGAAATACCCATGTTTGGGGGATGAG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR TCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCATTTTGTCAGTTTATTaGGGAGCTTCCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFILSVY*GASASP
Trigger: AGGAGAAGCGGAAGCTCCTCAATAAACTGACAAAAT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAATTTTGTCAGTTTATTaGGGAGCTTCCGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRILSVY*GASASP
Trigger: AGGAGAAGCGGAAGCTCCTCAATAAACTGACAAAAT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGCCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRAFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCACCACACTGTATTGTTaGTTACCGAGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFTTLYC*LPSVKV
Trigger: TACCTTCACACTCGGTAATCAACAATACAGTGTGGT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGCTAATTTCCAGGTTTaGCCTTTGCTGAAGAACAGA +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFANFQV*PLLKNR
Trigger: TCTGTTCTTCAGCAAAGGGCAAACCTGGAAATTAGC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000458381.6
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCCAATTCAATTGCTTTaGCAAGTTTTTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLPIQLL*QVFDAG
Trigger: ACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTACAAGCTGGAAAAGTaGTTCATGTTTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVYKLEK*FMFLGT
Trigger: AGTACCAAGAAACATGAAGCACTTTTCCAGCTTGTA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTTCTCTCTTTATCCATTaGACTGTTAGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SEISYHPLIWVDLIGVLISLFIH*TVRIFF
Trigger: GAAGAAGATCCTAACAGTGCAATGGATAAAGAGAGA...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR GCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTCTCTCTTTATCCATTaGACTGTTAGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLSLFIH*TVRIFF
Trigger: GAAGAAGATCCTAACAGTGCAATGGATAAAGAGAGA...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTCTCTCTTTATCCATTaGACTGTTAGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVSLFIH*TVRIFF
Trigger: GAAGAAGATCCTAACAGTGCAATGGATAAAGAGAGA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACAGAGTCTTGTTTTATaGCTTTGTAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRQSLVL*LCSCVA
Trigger: GGCAACACAGCTACAAAGGCATAAAACAAGACTCTG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCAGAGTCTTGTTTTATaGCTTTGTAGCTGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFQSLVL*LCSCVA
Trigger: GGCAACACAGCTACAAAGGCATAAAACAAGACTCTG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTTTCTTTTGTCATCCTTGTTaGTTTAGAGCTGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: LPNVGFFLVMVFTSLNVFFCHPC*FRAASQ
Trigger: CTGTGAAGCAGCTCTAAAGCAACAAGGATGACAAAA...GAAAACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp AACAAGTTACTAGGTAGACATCAGAGTCACAAATGTGGAGTCGTTTTTGTCATCTTTTGTCATCCTTGTTaGTTTAGAGCTGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: NKLLGRHQSHKCGVVFVIFCHPC*FRAASQ
Trigger: CTGTGAAGCAGCTCTAAAGCAACAAGGATGACAAAA...GATGACAAAAACGACTCCACATTTGTGACTCTGATGTCTACCTAGTAACTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp ACAGTTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTTTGAGAAGTGCTGGTaGTTAAAGCATCTTGATTGT +
Preference number: 4 (lower is better)
Translates to: TVTQRWLLPRYGIHITKCFEKCW*LKHLDC
Trigger: ACAATCAAGATGCTTTAAGCACCAGCACTTCTCAAA...ACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CCA 90 bp TTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTTTCTCAGAGTCACAAATGTaGAGTCGTTTTTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LPNVGFFLVMVFTSLNVFSESQM*SRFCHP
Trigger: AGGATGACAAAAACGACTCCACATTTGTGACTCTGA...GAAAACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CCA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTTCAGAGTCACAAATGTaGAGTCGTTTTTGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEISESQM*SRFCHP
Trigger: AGGATGACAAAAACGACTCCACATTTGTGACTCTGA...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CCA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAAAGAACTTGATCACTaGAGGTTACAACAATCTTGG +
Preference number: 4 (lower is better)
Translates to: NHTVLLITECEGSMFRVLKELDH*RLQQSW
Trigger: CCAAGATTGTTGTAACCTCCAGTGATCAAGTTCTTT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR TCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATTGGCCTTAATTTGCTaGTTCCAGTTGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLALIC*FQLLMT
Trigger: TGTCATTAGCAACTGGAATCAGCAAATTAAGGCCAA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTTGGCCTTAATTTGCTaGTTCCAGTTGCTAATGACA +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLALIC*FQLLMT
Trigger: TGTCATTAGCAACTGGAATCAGCAAATTAAGGCCAA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR TCA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTTTCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEIFFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGAA...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR TCA 90 bp AACAAGTTACTAGGTAGACATCAGAGTCACAAATGTGGAGTCGTTTTTGTCATCTTCTTCCTTGTCTTTTaGGGCTTTTTCAATGTCTCT +
Preference number: 4 (lower is better)
Translates to: NKLLGRHQSHKCGVVFVIFFLVF*GFFNVS
Trigger: AGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGAA...GATGACAAAAACGACTCCACATTTGTGACTCTGATGTCTACCTAGTAACTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR TCA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTAGTATTCCATTGCAATaGGTTATCGTGGTCCATATA +
Preference number: 4 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEISIPLQ*VIVVHI
Trigger: TATATGGACCACGATAACTCATTGCAATGGAATACT...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR TCA 90 bp TTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTTTCAGTATTCCATTGCAATaGGTTATCGTGGTCCATATA +
Preference number: 4 (lower is better)
Translates to: LPNVGFFLVMVFTSLNVFSIPLQ*VIVVHI
Trigger: TATATGGACCACGATAACTCATTGCAATGGAATACT...GAAAACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp GACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGTTTGCTCAGCTTGCTTaGCAGTTTCTGAAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DLISRFYCFQFNCFAKFLFAQLA*QFLKSF
Trigger: AAAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAA...CAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR GCA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTGCTTCCAATTCAATTaGTTTGCCAAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: LNHTVLLITECEGSMFRVCFQFN*FAKFLM
Trigger: CATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRFSVID*LELSTS
Trigger: GCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGC +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFFSVID*LELSTS
Trigger: GCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGAGCTTTCTACAAGCTaGAAAAGTGCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRELSTS*KSASCF
Trigger: GAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGAGCTTTCTACAAGCTaGAAAAGTGCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFELSTS*KSASCF
Trigger: GAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CCA 90 bp ACAGTTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTAAATTTGAGAAGTGCTaGTGCTTAAAGCATCTTGAT +
Preference number: 4 (lower is better)
Translates to: TVTQRWLLPRYGIHITKCKFEKC*CLKHLD
Trigger: ATCAAGATGCTTTAAGCACCAGCACTTCTCAAATTT...ACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACCAATTCAATTGCTTTaGCAAGTTTTTGATGCAGGT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRPIQLL*QVFDAG
Trigger: ACCTGCATCAAAAACTTGGCAAAGCAATTGAATTGG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATACAAGCTGGAAAAGTaGTTCATGTTTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRYKLEK*FMFLGT
Trigger: AGTACCAAGAAACATGAAGCACTTTTCCAGCTTGTA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTACAAGCTGGAAAAGTaGTTCATGTTTCTTGGTACT +
Preference number: 4 (lower is better)
Translates to: SYLNHTVLLITECEGSMFYKLEK*FMFLGT
Trigger: AGTACCAAGAAACATGAAGCACTTTTCCAGCTTGTA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATCTCTCTTTATCCATTaGACTGTTAGGATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRSLFIH*TVRIFF
Trigger: GAAGAAGATCCTAACAGTGCAATGGATAAAGAGAGA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTATGAAATTTGAGAAGTaGTGGTGCTTAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEIMKFEK*WCLKHL
Trigger: AAGATGCTTTAAGCACCAGCACTTCTCAAATTTCAT...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp TTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTTTTCATGAAATTTGAGAAGTaGTGGTGCTTAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: LPNVGFFLVMVFTSLNVFMKFEK*WCLKHL
Trigger: AAGATGCTTTAAGCACCAGCACTTCTCAAATTTCAT...GAAAACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACATATCCCTGGGTTCTaGATCTTTCTTATCACTATT +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRHIPGF*IFLITI
Trigger: AATAGTGATAAGAAAGATGCAGAACCCAGGGATATG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CCA 90 bp AACAAGTTACTAGGTAGACATCAGAGTCACAAATGTGGAGTCGTTTTTGTCATCAAATTTGAGAAGTGCTaGTGCTTAAAGCATCTTGAT +
Preference number: 4 (lower is better)
Translates to: NKLLGRHQSHKCGVVFVIKFEKC*CLKHLD
Trigger: ATCAAGATGCTTTAAGCACCAGCACTTCTCAAATTT...GATGACAAAAACGACTCCACATTTGTGACTCTGATGTCTACCTAGTAACTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR GCA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATGCTTCCAATTCAATTaGTTTGCCAAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: YLNHTVLLITECEGSMFRCFQFN*FAKFLM
Trigger: CATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
3UTR CAA 72 bp GTAAGAGCACTTTATTCTTATTTGAACCACACTGTATaGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VRALYSYLNHTV*LITECEGSMFR
Trigger: TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGAATAAAGTGCTCTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR GCA 90 bp GACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGTGCTTCCAATTCAATTaGTTTGCCAAGTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: DLISRFYCFQFNCFAKFLCFQFN*FAKFLM
Trigger: CATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCA...CAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CAA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCCACCAGGGGCTGGAGTaGAAGAACCTGGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTHQGLE*KNLDCS
Trigger: AGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTG...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS TCA 90 bp CTTGCCTGGCTTGAAAAGAATACAAGGCCTTGCAAAGTCTGCTGCTaGGCTGGGCTGCACCAGGGGCTGGAGTTGAAGAACCTGGATTGC +
Preference number: 5 (lower is better)
Translates to: LAWLEKNTRPCKVCC*AGLHQGLELKNLDC
Trigger: GCAATCCAGGTTCTTCAACTCCAGCCCCTGGTGCAGCCCAGCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTTTCAAGCCAGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS-3UTR CAA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCACAAGGATGGCTGGGTaGAGGTCTTTGCTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTTRMAG*RSLLKF
Trigger: GAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGT...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS GCA 90 bp AGCTGGGCTGCACCAGGGGCTGGAGTTGAAGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTGCTCACAATATTCTCTAATCTCTTC +
Preference number: 5 (lower is better)
Translates to: SWAAPGAGVEEPGLL*PPEDALLTIFSNLF
Trigger: GAAGAGATTAGAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTGCAGCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS CCA 90 bp GTCCTTTCACCTACGCTCCAGCATTCTGGACACTGTAATCAAGGTTaGGTGTGTCCTGGACTTCCGGGATTCAAAGGGCCTAGAGTACGT +
Preference number: 5 (lower is better)
Translates to: VLSPTLQHSGHCNQG*VCPGLPGFKGPRVR
Trigger: ACGTACTCTAGGCCCTTTGAATCCCGGAAGTCCAGGACACACCCAACCTTGATTACAGTGTCCAGAATGCTGGAGCGTAGGTGAAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp ATTCCCTCTGAGGCCCAGGCCCAGGCACTGCTAACACAACTTTTTCTCGTGTTCCTTTGCTCAGCTTGCTaGCCAGTTTCTGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: IPSEAQAQALLTQLFLVFLCSAC*PVSEVL
Trigger: AAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAAG...GAACACGAGAAAAAGTTGTGTTAGCAGTGCCTGGGCCTGGGCCTCAGAGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTTGCTTTGCCAAGTTTTaGATGCAGGTCCGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCCFAKF*MQVRCG
Trigger: TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCA...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CAA 90 bp GACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACACCGATTTTGTCAGTTTATaGAGGAGCTTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DFRQAAEPTLDSVCFCDTDFVSL*RSFRFS
Trigger: GGAGAAGCGGAAGCTCCTCAATAAACTGACAAAATC...GGTGTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCVEEPG*LCPPED
Trigger: ATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAAC...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTCACCAGGGGCTGGAGTaGAAGAACCTGGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSHQGLE*KNLDCS
Trigger: AGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTG...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTGCAGCTGAACCCACCTaGGACTCCGTCTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSAAEPT*DSVCFC
Trigger: ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGC...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGAGGTTACAACAATCTaGGGTAGCTACCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSEVTTI*GSYHRA
Trigger: AGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCTC...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS TCA 90 bp TGTCCCGAGAAAGTAAAGAACTGCTCTGGGTCAAGACGGCCAGTGTaGGATAGTGAGAATGACTTCTGTAAACCCTCAGAGGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: CPEKVKNCSGSRRPV*DSENDFCKPSEGRI
Trigger: GATCCTGCCCTCTGAGGGTTTACAGAAGTCATTCTCACTATCTCACACTGGCCGTCTTGACCCAGAGCAGTTCTTTACTTTCTCGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CCA 90 bp GTACGTCAGTCCTTGTCAAACATTCCAAGGAGGAAGTCCCAGCCCTaGACTTTCATCCCGTTTGTGTCCCGAGAAAGTAAAGAACTGCTC +
Preference number: 5 (lower is better)
Translates to: VRQSLSNIPRRKSQP*TFIPFVSRESKELL
Trigger: GAGCAGTTCTTTACTTTCTCGGGACACAAACGGGATGAAAGTCCAGGGCTGGGACTTCCTCCTTGGAATGTTTGACAAGGACTGACGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCAAAGAATACAAGGCCTaGCAAAGTCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFKEYKA*QSLLLS
Trigger: GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTT...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCCTGCTGTGTTCTGTaGCCACCCAAATCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAACCVL*PPKSRG
Trigger: TCCTCTGGATTTGGGTGGCAACAGAACACAGCAGGC...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACTGCCTGTCTCTCTTCTaGGAATTGATCTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDCLSLF*ELICVP
Trigger: AGGAACACAGATCAATTCCAAGAAGAGAGACAGGCA...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTAGAGTACGTCAGTCCTaGTCAAACATTCCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCRVRQS*SNIPRR
Trigger: CCTCCTTGGAATGTTTGACAAGGACTGACGTACTCT...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS TCA 90 bp AATTTCCAGGTTTGCCCGGACAATCTGTCAGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGTCCTTTCACCTACGCTCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: NFQVCPDNLSVGPSC*NVSGFCPFTYAPAF
Trigger: GAATGCTGGAGCGTAGGTGAAAGGACAAAAGCCAGACACATTTCAACATGAGGGACCCACTGACAGATTGTCCGGGCAAACCTGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445023.6
CDS-3UTR CAA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTTGCTTTGCCAAGTTTTaGATGCAGGTCCGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSCFAKF*MQVRCG
Trigger: TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCA...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGATTTTGTCAGTTTATaGAGGAGCTTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCDFVSL*RSFRFS
Trigger: GGAGAAGCGGAAGCTCCTCAATAAACTGACAAAATC...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCGGCCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFGLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGCC...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGGCCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCGLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGCC...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCACAAGGATGGCTGGGTaGAGGTCTTTGCTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCTRMAG*RSLLKF
Trigger: GAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGT...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCACACCAGGGGCTGGAGTaGAAGAACCTGGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: CLDCLSLFLELICVPHLPHQGLE*KNLDCS
Trigger: AGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTG...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp TACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTGCAGCTGAACCCACCTaGGACTCCGTCTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: YHPLIWVDLIGVLIACLSAAEPT*DSVCFC
Trigger: ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGC...AGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp ACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATGCCTGCTGTGTTCTGTaGCCACCCAAATCCAGAGGA +
Preference number: 5 (lower is better)
Translates to: TQIQRKKTSKSHCCCLPDACCVL*PPKSRG
Trigger: TCCTCTGGATTTGGGTGGCAACAGAACACAGCAGGC...ATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTTCCAGGTTTGCCCTTaGCTGAAGAACAGATGTGAC +
Preference number: 5 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCFQVCP*LKNRCD
Trigger: GTCACATCTGTTCTTCAGCAAAGGGCAAACCTGGAA...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317647.12
CDS-3UTR CAA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCCTTCTCAGTCATAGATaGCTTGGAGCTTTCTACAAG +
Preference number: 5 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSLLSHR*LGAFYK
Trigger: CTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAG...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTGACCAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: SDFRQAAEPTLDSVCFCDQVLLT*MTVCRS
Trigger: ACTCCTACAAACTGTCATCAATGTTAGCAGAACTTG...GTCACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTCCACCAGAAGATGCCTaGCTCACAATATTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCPPEDA*LTIFSN
Trigger: ATTAGAGAATATTGTGAGCAAGGCATCTTCTGGTGG...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAVEEPG*LCPPED
Trigger: ATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAAC...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTCTGTGTTGCCAGCATTaGAAGGTAACTCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSLCCQH*KVTPPH
Trigger: ATGTGGAGGAGTTACCTTCAAATGCTGGCAACACAG...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp GATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: DNSDFRQAAEPTLDSVCFNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...GAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS GCA 90 bp GACAAAGTTTTTACCCTCTTGTGCTTCAGTTTATCTCTGGGATCTTaGATCCCTTTTCTCCTGATTCTTCCCTTCTGGTGGGCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: DKVFTLLCFSLSLGS*IPFLLILPFWWAVC
Trigger: GCAGACAGCCCACCAGAAGGGAAGAATCAGGAGAAAAGGGATGCAAGATCCCAGAGATAAACTGAAGCACAAGAGGGTAAAAACTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCACTTTGCTCAGCTTGCTaGCCAGTTTCTGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQALCSAC*PVSEVL
Trigger: AAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAAG...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCACCAGGGGCTGGAGTaGAAGAACCTGGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLHQGLE*KNLDCS
Trigger: AGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCTTGAACCACACTGTATaGTTGATTACCGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: CLPDNSDFRQAAEPTLDSLNHTV*LITECE
Trigger: TTCACACTCGGTAATCAACAATACAGTGTGGTTCAA...GGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGCAGCTGAACCCACCTaGGACTCCGTCTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLAAEPT*DSVCFC
Trigger: ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGGACTTTCATCCCGTTaGTGTCCCGAGAAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAGLSSR*CPEKVK
Trigger: CTTTACTTTCTCGGGACACAAACGGGATGAAAGTCC...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS TCA 90 bp TTTCTTCCATTACAGCCTGGATATCTTTTTCAATGTCAATCTTGCTaGTGGCACAGTGAATCTGCGTGTGGCATGTGGTCAGGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: FLPLQPGYLFQCQSC*WHSESACGMWSGFG
Trigger: GCCAAACCCTGACCACATGCCACACGCAGATTCACTGTGCCATCAGCAAGATTGACATTGAAAAAGATATCCAGGCTGTAATGGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000486873.2
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000620000.1
ENST00000620516.4
CDS TCA 90 bp ACAATGTCACCCTTTTCCAAATTCAACTCATCATCTTGCCTGGCTTaGAAAGAATACAAGGCCTTGCAAAGTCTGCTGCTGAGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: TMSPFSKFNSSSCLA*KEYKALQSLLLSWA
Trigger: AGCCCAGCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTTTCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAGGGTGACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS CCA 90 bp CTTCTTCTCATCCCCCAAACATGGGTATTTCTCAAGGTTCTGCTTTaGCAGGCAGTGCAGAACAGATCAAAGCTTGGACTAAGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLLIPQTWVFLKVLL*QAVQNRSKLGLSSL
Trigger: CAAAGAACTTAGTCCAAGCTTTGATCTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAGAAATACCCATGTTTGGGGGATGAGAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGATTTTGTCAGTTTATaGAGGAGCTTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQADFVSL*RSFRFS
Trigger: GGAGAAGCGGAAGCTCCTCAATAAACTGACAAAATC...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp AACTCTGACTTCAGGCAAGCAGCTGAACCCACCTTGGACTCCGTCTGTTTCTGTAGGTCTAGTTTCAAATaGTTCTCATCCATTAACGCT +
Preference number: 5 (lower is better)
Translates to: NSDFRQAAEPTLDSVCFCRSSFK*FSSINA
Trigger: AGCGTTAATGGATGAGAACAATTTGAAACTAGACCT...ACAGAAACAGACGGAGTCCAAGGTGGGTTCAGCTGCTTGCCTGAAGTCAGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp TACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGCCTGTCTCTCTAAAGAATACAAGGCCTaGCAAAGTCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: YHPLIWVDLIGVLIACLSKEYKA*QSLLLS
Trigger: GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTT...AGAGAGACAGGCAATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp CATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGACAGATGTGACCTGTTaGCAGAAATTCTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: HLSPTAVVYQITLTSGKQTDVTC*QKFSPF
Trigger: AAATGGAGAGAATTTCTGCAAACAGGTCACATCTGT...CTGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CAA 90 bp GGTCTCCTAGAATTTGGAAACTCCTCTAGGAACCAAGGAGCCTCTTCCTTGTCTACAGATGTGACCTGTTaGCAGAAATTCTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: GLLEFGNSSRNQGASSLSTDVTC*QKFSPF
Trigger: AAATGGAGAGAATTTCTGCAAACAGGTCACATCTGT...AGACAAGGAAGAGGCTCCTTGGTTCCTAGAGGAGTTTCCAAATTCTAGGAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CAA 90 bp AAAAAGACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCTTTGCTCAGCTTGCTaGCCAGTTTCTGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: KKTSKSHCCCLPDNSDFRLCSAC*PVSEVL
Trigger: AAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAAG...CCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000444448.6
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTGCTTTGCCAAGTTTTaGATGCAGGTCCGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLCFAKF*MQVRCG
Trigger: TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCA...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CAA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCCAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCQVLLT*MTVCRS
Trigger: ACTCCTACAAACTGTCATCAATGTTAGCAGAACTTG...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCACAAGGATGGCTGGGTaGAGGTCTTTGCTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVTRMAG*RSLLKF
Trigger: GAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLVEEPG*LCPPED
Trigger: ATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAAC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCAGAGATATCCTACCATCCCCTAATTTGGGTTGATCTCATTGGTGTCTTGATTGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: SEISYHPLIWVDLIGVLIVEEPG*LCPPED
Trigger: ATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAAC...AATCAAGACACCAATGAGATCAACCCAAATTAGGGGATGGTAGGATATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCACCAGGGGCTGGAGTaGAAGAACCTGGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFHQGLE*KNLDCS
Trigger: AGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp CTGTGTTCTGTTGCCACCCAAATCCAGAGGAAAAAGACATCTAAGTCCCACTGCTTGAACCACACTGTATaGTTGATTACCGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: LCSVATQIQRKKTSKSHCLNHTV*LITECE
Trigger: TTCACACTCGGTAATCAACAATACAGTGTGGTTCAA...GCAGTGGGACTTAGATGTCTTTTTCCTCTGGATTTGGGTGGCAACAGAACACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCATGCCTGTCTCTCTTCTaGGAATTGATCTGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: CLDCLSLFLELICVPHLPCLSLF*ELICVP
Trigger: AGGAACACAGATCAATTCCAAGAAGAGAGACAGGCA...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCAGCTTATCCAAAGAACTaGATCACTGGAGGTTACAAC +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQAAYPKN*ITGGYN
Trigger: GTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAGC...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS TCA 90 bp TGTATACTTTATTATACGGACAATCTGTCAGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGTCCTTTCACCTACGCTCCAGCATTC +
Preference number: 5 (lower is better)
Translates to: CILYYTDNLSVGPSC*NVSGFCPFTYAPAF
Trigger: GAATGCTGGAGCGTAGGTGAAAGGACAAAAGCCAGACACATTTCAACATGAGGGACCCACTGACAGATTGTCCGTATAATAAAGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439509.5
ENST00000444448.6
ENST00000458381.6
CDS GCA 90 bp GTCAGTTTATTGAGGAGCTTCCGCTTCTCCTTCTCAGTCATAGATTaGTTGGAGCTTTCTACAAGCTGGAAAAGTGCTTCATGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: VSLLRSFRFSFSVID*LELSTSWKSASCFL
Trigger: CAAGAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAGGAGAAGCGGAAGCTCCTCAATAAACTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000447264.2
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000619846.4
ENST00000620516.4
CDS GCA 90 bp CCACTTTCTGGCTGTAAGACCAAGGACAAAGTTTTTACCCTCTTGTaGTTCAGTTTATCTCTGGGATCTTGCATCCCTTTTCTCCTGATT +
Preference number: 5 (lower is better)
Translates to: PLSGCKTKDKVFTLL*FSLSLGSCIPFLLI
Trigger: AATCAGGAGAAAAGGGATGCAAGATCCCAGAGATAAACTGAAGCACAAGAGGGTAAAAACTTTGTCCTTGGTCTTACAGCCAGAAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS CCA 90 bp CTTTGCTTATCCAAAGAACTTGATCACTGGAGGTTACAACAATCTTaGGTAGCTACCACAGGGCTAGAATTAGACAAAGCAACTCACGTG +
Preference number: 5 (lower is better)
Translates to: LCLSKELDHWRLQQS*VATTGLELDKATHV
Trigger: CACGTGAGTTGCTTTGTCTAATTCTAGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CCA 90 bp ACACTTAATGCCCTCCCTCTTTGCTTATCCAAAGAACTTGATCACTaGAGGTTACAACAATCTTGGGTAGCTACCACAGGGCTAGAATTA +
Preference number: 5 (lower is better)
Translates to: TLNALPLCLSKELDH*RLQQSWVATTGLEL
Trigger: TAATTCTAGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAGCAAAGAGGGAGGGCATTAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCACTTCTTGGCCTTAATTaGCTGATTCCAGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQALLGLN*LIPVAN
Trigger: ATTAGCAACTGGAATCAGCAAATTAAGGCCAAGAAG...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS-3UTR CAA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCACCACCAGAAGATGCCTaGCTCACAATATTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: CLDCLSLFLELICVPHLPPPEDA*LTIFSN
Trigger: ATTAGAGAATATTGTGAGCAAGGCATCTTCTGGTGG...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAAAGAATACAAGGCCTaGCAAAGTCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLKEYKA*QSLLLS
Trigger: GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAAAGAATACAAGGCCTaGCAAAGTCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVKEYKA*QSLLLS
Trigger: GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCTGTGTTGCCAGCATTaGAAGGTAACTCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLCCQH*KVTPPH
Trigger: ATGTGGAGGAGTTACCTTCAAATGCTGGCAACACAG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCTGTGTTGCCAGCATTaGAAGGTAACTCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLCCQH*KVTPPH
Trigger: ATGTGGAGGAGTTACCTTCAAATGCTGGCAACACAG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACAGGATCCTGAGTCCTaGCAACAAGAGTGGAGAGGA +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRQDPES*QQEWRG
Trigger: TCCTCTCCACTCTTGTTGCAAGGACTCAGGATCCTG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAGAGTACGTCAGTCCTaGTCAAACATTCCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVRVRQS*SNIPRR
Trigger: CCTCCTTGGAATGTTTGACAAGGACTGACGTACTCT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp ACATCTAAGTCCCACTGCTGTTGTCTACCAGATAACTCTGACTTCAGGCAAGCACTCATGATTAGCCTCTaGACTATGTCATATCCAAAC +
Preference number: 5 (lower is better)
Translates to: TSKSHCCCLPDNSDFRQALMISL*TMSYPN
Trigger: GTTTGGATATGACATAGTCAAGAGGCTAATCATGAG...TGCTTGCCTGAAGTCAGAGTTATCTGGTAGACAACAGCAGTGGGACTTAGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444448.6
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATCTCAAGGTTCTGCTTaGGCAGGCAGTGCAGAACAG +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRSQGSA*AGSAEQ
Trigger: CTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAGA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGATGCTTTGCCAAGTTTTaGATGCAGGTCCGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRCFAKF*MQVRCG
Trigger: TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCA...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CAA 90 bp TGTCTTGATTGCCTGTCTCTCTTCTTGGAATTGATCTGTGTTCCTCATCTCCCACTTCTTGGCCTTAATTaGCTGATTCCAGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: CLDCLSLFLELICVPHLPLLGLN*LIPVAN
Trigger: ATTAGCAACTGGAATCAGCAAATTAAGGCCAAGAAG...TGGGAGATGAGGAACACAGATCAATTCCAAGAAGAGAGACAGGCAATCAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317647.12
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGATTTTGTCAGTTTATaGAGGAGCTTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLDFVSL*RSFRFS
Trigger: GGAGAAGCGGAAGCTCCTCAATAAACTGACAAAATC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCGGCCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVGLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGCC...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGGCCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLGLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGCC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCACAAGGATGGCTGGGTaGAGGTCTTTGCTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFTRMAG*RSLLKF
Trigger: GAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAACAAGGATGGCTGGGTaGAGGTCTTTGCTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRTRMAG*RSLLKF
Trigger: GAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFVEEPG*LCPPED
Trigger: ATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAAC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRVEEPG*LCPPED
Trigger: ATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAAC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACAAGTTACTAGGTAGACATCAGAGTCACAAATGTGGAGTCGTTTTTGTCATCAACAGTTACCCAACGTaGGCTTCTTCCTCGTTATGG +
Preference number: 5 (lower is better)
Translates to: NKLLGRHQSHKCGVVFVINSYPT*ASSSLW
Trigger: CCATAACGAGGAAGAAGCCAACGTTGGGTAACTGTT...GATGACAAAAACGACTCCACATTTGTGACTCTGATGTCTACCTAGTAACTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CAA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTAACAGTTACCCAACGTaGGCTTCTTCCTCGTTATGG +
Preference number: 5 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEINSYPT*ASSSLW
Trigger: CCATAACGAGGAAGAAGCCAACGTTGGGTAACTGTT...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGAGGTTACAACAATCTaGGGTAGCTACCACAGGGCT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFREVTTI*GSYHRA
Trigger: AGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCTC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCTTGGACTAAGTTCTTaGCATCACCACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLGLSS*HHHFLA
Trigger: AGCCAGAAAGTGGTGATGCAAAGAACTTAGTCCAAG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCTTTGCTCAGCTTGCTaGCCAGTTTCTGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLCSAC*PVSEVL
Trigger: AAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAAG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACTTTGCTCAGCTTGCTaGCCAGTTTCTGAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLCSAC*PVSEVL
Trigger: AAGGACTTCAGAAACTGGCAAGCAAGCTGAGCAAAG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
CDS-3UTR CAA 90 bp GACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGTGCTTTGCCAAGTTTTaGATGCAGGTCCGCTGTGGA +
Preference number: 5 (lower is better)
Translates to: DLISRFYCFQFNCFAKFLCFAKF*MQVRCG
Trigger: TCCACAGCGGACCTGCATCAAAAACTTGGCAAAGCA...CAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCTTCTCAGTCATAGATaGCTTGGAGCTTTCTACAAG +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLLSHR*LGAFYK
Trigger: CTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCTTCTCAGTCATAGATaGCTTGGAGCTTTCTACAAG +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLLLSHR*LGAFYK
Trigger: CTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCCACCAGAAGATGCCTaGCTCACAATATTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVPPEDA*LTIFSN
Trigger: ATTAGAGAATATTGTGAGCAAGGCATCTTCTGGTGG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCCACCAGAAGATGCCTaGCTCACAATATTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLPPEDA*LTIFSN
Trigger: ATTAGAGAATATTGTGAGCAAGGCATCTTCTGGTGG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAAAGAATACAAGGCCTaGCAAAGTCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFKEYKA*QSLLLS
Trigger: GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAAAAGAATACAAGGCCTaGCAAAGTCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRKEYKA*QSLLLS
Trigger: GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCTGTGTTGCCAGCATTaGAAGGTAACTCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLCCQH*KVTPPH
Trigger: ATGTGGAGGAGTTACCTTCAAATGCTGGCAACACAG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACTGTGTTGCCAGCATTaGAAGGTAACTCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLCCQH*KVTPPH
Trigger: ATGTGGAGGAGTTACCTTCAAATGCTGGCAACACAG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGGCTTATCCAAAGAACTaGATCACTGGAGGTTACAAC +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLAYPKN*ITGGYN
Trigger: GTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAGC...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGGACTTTCATCCCGTTaGTGTCCCGAGAAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRGLSSR*CPEKVK
Trigger: CTTTACTTTCTCGGGACACAAACGGGATGAAAGTCC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CCA 90 bp ACTCTTCAAGCAATCTCTCGAGTACCAAAATATAACACCACATTCTaGAAAGTAGGACAGCTTGTAATCACTCCTCCAGTCATATCACTT +
Preference number: 5 (lower is better)
Translates to: TLQAISRVPKYNTTF*KVGQLVITPPVISL
Trigger: AAGTGATATGACTGGAGGAGTGATTACAAGCTGTCCTACTTTCCAGAATGTGGTGTTATATTTTGGTACTCGAGAGATTGCTTGAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471833.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCCTTCTTGGCCTTAATTaGCTGATTCCAGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLLGLN*LIPVAN
Trigger: ATTAGCAACTGGAATCAGCAAATTAAGGCCAAGAAG...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGATTTTGTCAGTTTATaGAGGAGCTTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRDFVSL*RSFRFS
Trigger: GGAGAAGCGGAAGCTCCTCAATAAACTGACAAAATC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGATTTTGTCAGTTTATaGAGGAGCTTCCGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFDFVSL*RSFRFS
Trigger: GGAGAAGCGGAAGCTCCTCAATAAACTGACAAAATC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCGGCCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFGLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGCC...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGGCCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRGLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGCC...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGCAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLQVLLT*MTVCRS
Trigger: ACTCCTACAAACTGTCATCAATGTTAGCAGAACTTG...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAACCACACTGTATaGTTGATTACCGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVLNHTV*LITECE
Trigger: TTCACACTCGGTAATCAACAATACAGTGTGGTTCAA...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp ACAGTTACCCAACGTTGGCTTCTTCCTCGTTATGGTATTCACATCACTAAATGTCTTCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: TVTQRWLLPRYGIHITKCLLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGAAG...ACATTTAGTGATGTGAATACCATAACGAGGAAGAAGCCAACGTTGGGTAACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CAA 90 bp GACTTGATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGGAGAACCCCATCTCTTaGCTGAAGAACAGATGTGAC +
Preference number: 5 (lower is better)
Translates to: DLISRFYCFQFNCFAKFLENPIS*LKNRCD
Trigger: GTCACATCTGTTCTTCAGCAAAGAGATGGGGTTCTC...CAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTATCAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACTTCTCAGTCATAGATaGCTTGGAGCTTTCTACAAG +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLLSHR*LGAFYK
Trigger: CTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCTTCTCAGTCATAGATaGCTTGGAGCTTTCTACAAG +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLLSHR*LGAFYK
Trigger: CTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp AACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGAGGTCTAGTTTCAAATaGTTCTCATCCATTAACGCT +
Preference number: 5 (lower is better)
Translates to: NHTVLLITECEGSMFRVLRSSFK*FSSINA
Trigger: AGCGTTAATGGATGAGAACAATTTGAAACTAGACCT...CAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCAGGTCTAGTTTCAAATaGTTCTCATCCATTAACGCT +
Preference number: 5 (lower is better)
Translates to: LNHTVLLITECEGSMFRVRSSFK*FSSINA
Trigger: AGCGTTAATGGATGAGAACAATTTGAAACTAGACCT...GACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACCACCAGAAGATGCCTaGCTCACAATATTCTCTAAT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRPPEDA*LTIFSN
Trigger: ATTAGAGAATATTGTGAGCAAGGCATCTTCTGGTGG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAAACCACACTGTATTGTaGATTACCGAGTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRNHTVL*ITECEG
Trigger: ACCTTCACACTCGGTAATCAACAATACAGTGTGGTT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTCTTCTTCCTTGTCTTTaGAGGCTTTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEILLPCL*RLFQCL
Trigger: GAGACATTGAAAAAGCCTCAAAAGACAAGGAAGAAG...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAACAGATGTGACCTGTTaGCAGAAATTCTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRTDVTC*QKFSPF
Trigger: AAATGGAGAGAATTTCTGCAAACAGGTCACATCTGT...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000458381.6
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACTTCTTGGCCTTAATTaGCTGATTCCAGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRLLGLN*LIPVAN
Trigger: ATTAGCAACTGGAATCAGCAAATTAAGGCCAAGAAG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCTTCTTGGCCTTAATTaGCTGATTCCAGTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLLGLN*LIPVAN
Trigger: ATTAGCAACTGGAATCAGCAAATTAAGGCCAAGAAG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp CTGGAGTACGTTTTAAGCATTCGTTCCAGGCCTTTCTCTTCACTTAATGAAATTAGGTCTAGTTTCAAATaGTTCTCATCCATTAACGCT +
Preference number: 5 (lower is better)
Translates to: LEYVLSIRSRPFSSLNEIRSSFK*FSSINA
Trigger: AGCGTTAATGGATGAGAACAATTTGAAACTAGACCT...AATTTCATTAAGTGAAGAGAAAGGCCTGGAACGAATGCTTAAAACGTACTCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CAA 90 bp AACAAGTTACTAGGTAGACATCAGAGTCACAAATGTGGAGTCGTTTTTGTCATCAGGTCTAGTTTCAAATaGTTCTCATCCATTAACGCT +
Preference number: 5 (lower is better)
Translates to: NKLLGRHQSHKCGVVFVIRSSFK*FSSINA
Trigger: AGCGTTAATGGATGAGAACAATTTGAAACTAGACCT...GATGACAAAAACGACTCCACATTTGTGACTCTGATGTCTACCTAGTAACTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427068.1
ENST00000613802.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFQVLLT*MTVCRS
Trigger: ACTCCTACAAACTGTCATCAATGTTAGCAGAACTTG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGACAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGT +
Preference number: 5 (lower is better)
Translates to: YLNHTVLLITECEGSMFRQVLLT*MTVCRS
Trigger: ACTCCTACAAACTGTCATCAATGTTAGCAGAACTTG...TCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCTTGAACCACACTGTATaGTTGATTACCGAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLNHTV*LITECE
Trigger: TTCACACTCGGTAATCAACAATACAGTGTGGTTCAA...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCCTCATGATTAGCCTCTaGACTATGTCATATCCAAAC +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFLMISL*TMSYPN
Trigger: GTTTGGATATGACATAGTCAAGAGGCTAATCATGAG...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000444448.6
ENST00000458381.6
ENST00000610364.4
CDS-3UTR CAA 90 bp ATAAGTCGGTTTTATTGCTTCCAATTCAATTGCTTTGCCAAGTTTTTGATGCAGACAGATGTGACCTGTTaGCAGAAATTCTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: ISRFYCFQFNCFAKFLMQTDVTC*QKFSPF
Trigger: AAATGGAGAGAATTTCTGCAAACAGGTCACATCTGT...CTGCATCAAAAACTTGGCAAAGCAATTGAATTGGAAGCAATAAAACCGACTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS-3UTR CAA 90 bp TCTTATTTGAACCACACTGTATTGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGGTCTAGTTTCAAATaGTTCTCATCCATTAACGCT +
Preference number: 5 (lower is better)
Translates to: SYLNHTVLLITECEGSMFRSSFK*FSSINA
Trigger: AGCGTTAATGGATGAGAACAATTTGAAACTAGACCT...GAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000618893.1
CDS TCA 72 bp CCAGGTTTGCCCTGCAGTCCTAGCTACTTGAGAGGCTaGGGCGAGAGGAGTTCGCGAGCACAGGAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: PGLPCSPSYLRG*GERSSRAQESE
Trigger: CTCAGACTCCTGTGCTCGCGAACTCCTCTCGCCTCAGCCTCTCAAGTAGCTAGGACTGCAGGGCAAACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439509.5
CDS CAA 72 bp TGGGCTGCACCAGGGGCTGGAGTTGAAGAACCTGGATaGCTCTGCCCACCAGAAGATGCCTTGCTCACAATA +
Preference number: 6 (lower is better)
Translates to: WAAPGAGVEEPG*LCPPEDALLTI
Trigger: TATTGTGAGCAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTGCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS CCA 72 bp CCTACGCTCCAGCATTCTGGACACTGTAATCAAGGTTaGGTGTGTCCTGGACTTCCGGGATTCAAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: PTLQHSGHCNQG*VCPGLPGFKGP
Trigger: AGGCCCTTTGAATCCCGGAAGTCCAGGACACACCCAACCTTGATTACAGTGTCCAGAATGCTGGAGCGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CAA 72 bp CTTCCGGGATTCAAAGGGCCTAGAGTACGTCAGTCCTaGTCAAACATTCCAAGGAGGAAGTCCCAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LPGFKGPRVRQS*SNIPRRKSQPW
Trigger: CCAGGGCTGGGACTTCCTCCTTGGAATGTTTGACAAGGACTGACGTACTCTAGGCCCTTTGAATCCCGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS GCA 72 bp GCACCAGGGGCTGGAGTTGAAGAACCTGGATTGCTCTaGCCACCAGAAGATGCCTTGCTCACAATATTCTCT +
Preference number: 6 (lower is better)
Translates to: APGAGVEEPGLL*PPEDALLTIFS
Trigger: AGAGAATATTGTGAGCAAGGCATCTTCTGGTGGGCAGAGCAATCCAGGTTCTTCAACTCCAGCCCCTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS CAA 72 bp CAAGGAGGAAGTCCCAGCCCTGGACTTTCATCCCGTTaGTGTCCCGAGAAAGTAAAGAACTGCTCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: QGGSPSPGLSSR*CPEKVKNCSGS
Trigger: TGACCCAGAGCAGTTCTTTACTTTCTCGGGACACAAACGGGATGAAAGTCCAGGGCTGGGACTTCCTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CAA 90 bp CAAACATTCCAAGGAGGAAGTCCCAGCCCTGGACTTTCATCCCGTTaGTGTCCCGAGAAAGTAAAGAACTGCTCTGGGTCAAGACGGCCA +
Preference number: 6 (lower is better)
Translates to: QTFQGGSPSPGLSSR*CPEKVKNCSGSRRP
Trigger: TGGCCGTCTTGACCCAGAGCAGTTCTTTACTTTCTCGGGACACAAACGGGATGAAAGTCCAGGGCTGGGACTTCCTCCTTGGAATGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CAA 90 bp TGTCCTGGACTTCCGGGATTCAAAGGGCCTAGAGTACGTCAGTCCTaGTCAAACATTCCAAGGAGGAAGTCCCAGCCCTGGACTTTCATC +
Preference number: 6 (lower is better)
Translates to: CPGLPGFKGPRVRQS*SNIPRRKSQPWTFI
Trigger: GATGAAAGTCCAGGGCTGGGACTTCCTCCTTGGAATGTTTGACAAGGACTGACGTACTCTAGGCCCTTTGAATCCCGGAAGTCCAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CCA 72 bp TTTAGTAGAGACACAGTTTCATCATGTTGGCCAAACTaGTCTCCAGCGCCTGACCTTGTGATCCACCCGCCT +
Preference number: 6 (lower is better)
Translates to: FSRDTVSSCWPN*SPAPDLVIHPP
Trigger: AGGCGGGTGGATCACAAGGTCAGGCGCTGGAGACCAGTTTGGCCAACATGATGAAACTGTGTCTCTACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472260.1
ENST00000614172.1
CDS TCA 72 bp GTTTGCCCGGACAATCTGTCAGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGTCCTTTCACCTACGCT +
Preference number: 6 (lower is better)
Translates to: VCPDNLSVGPSC*NVSGFCPFTYA
Trigger: AGCGTAGGTGAAAGGACAAAAGCCAGACACATTTCAACATGAGGGACCCACTGACAGATTGTCCGGGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445023.6
CDS CCA 72 bp GCCCTCCCTCTTTGCTTATCCAAAGAACTTGATCACTaGAGGTTACAACAATCTTGGGTAGCTACCACAGGG +
Preference number: 6 (lower is better)
Translates to: ALPLCLSKELDH*RLQQSWVATTG
Trigger: CCCTGTGGTAGCTACCCAAGATTGTTGTAACCTCCAGTGATCAAGTTCTTTGGATAAGCAAAGAGGGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CCA 72 bp TCCTTGTCAAACATTCCAAGGAGGAAGTCCCAGCCCTaGACTTTCATCCCGTTTGTGTCCCGAGAAAGTAAA +
Preference number: 6 (lower is better)
Translates to: SLSNIPRRKSQP*TFIPFVSRESK
Trigger: TTTACTTTCTCGGGACACAAACGGGATGAAAGTCCAGGGCTGGGACTTCCTCCTTGGAATGTTTGACAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CAA 72 bp CATCCCCCAAACATGGGTATTTCTCAAGGTTCTGCTTaGGCAGGCAGTGCAGAACAGATCAAAGCTTGGACT +
Preference number: 6 (lower is better)
Translates to: HPPNMGISQGSA*AGSAEQIKAWT
Trigger: AGTCCAAGCTTTGATCTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAGAAATACCCATGTTTGGGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS CAA 90 bp GGACAATCTGTCAGTGGGTCCCTCATGTTGAAATGTGTCTGGCTTTaGTCCTTTCACCTACGCTCCAGCATTCTGGACACTGTAATCAAG +
Preference number: 6 (lower is better)
Translates to: GQSVSGSLMLKCVWL*SFHLRSSILDTVIK
Trigger: CTTGATTACAGTGTCCAGAATGCTGGAGCGTAGGTGAAAGGACAAAAGCCAGACACATTTCAACATGAGGGACCCACTGACAGATTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CAA 90 bp CACAATGTCACCCTTTTCCAAATTCAACTCATCATCTTGCCTGGCTaGAAAAGAATACAAGGCCTTGCAAAGTCTGCTGCTGAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: HNVTLFQIQLIILPG*KRIQGLAKSAAELG
Trigger: GCCCAGCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTTTCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAGGGTGACATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS GCA 72 bp TTCTCATCCCCCAAACATGGGTATTTCTCAAGGTTCTaGTTTGGCAGGCAGTGCAGAACAGATCAAAGCTTG +
Preference number: 6 (lower is better)
Translates to: FSSPKHGYFSRF*FGRQCRTDQSL
Trigger: CAAGCTTTGATCTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAGAAATACCCATGTTTGGGGGATGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS GCA 72 bp ATTGCTGTCGGTGTGAAAAGTACAATAATGAGACTATaGATCAGATCCAACAGTGGGCCCCAGGAGAGGGTA +
Preference number: 6 (lower is better)
Translates to: IAVGVKSTIMRL*IRSNSGPQERV
Trigger: TACCCTCTCCTGGGGCCCACTGTTGGATCTGATGCATAGTCTCATTATTGTACTTTTCACACCGACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471833.1
CDS CCA 72 bp TCTGCTTTGGCAGGCAGTGCAGAACAGATCAAAGCTTaGACTAAGTTCTTTGCATCACCACTTTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: SALAGSAEQIKA*TKFFASPLSGC
Trigger: ACAGCCAGAAAGTGGTGATGCAAAGAACTTAGTCCAAGCTTTGATCTGTTCTGCACTGCCTGCCAAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS CCA 72 bp ATCCCCCAAACATGGGTATTTCTCAAGGTTCTGCTTTaGCAGGCAGTGCAGAACAGATCAAAGCTTGGACTA +
Preference number: 6 (lower is better)
Translates to: IPQTWVFLKVLL*QAVQNRSKLGL
Trigger: TAGTCCAAGCTTTGATCTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAGAAATACCCATGTTTGGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS CCA 72 bp AAGTACAATAATGAGACTATGCATCAGATCCAACAGTaGGCCCCAGGAGAGGGTAATAAACCCAGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: KYNNETMHQIQQ*APGEGNKPSLR
Trigger: CCTCAGACTGGGTTTATTACCCTCTCCTGGGGCCCACTGTTGGATCTGATGCATAGTCTCATTATTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471833.1
CDS TCA 72 bp ATATCTTTTTCAATGTCAATCTTGCTGATGGCACAGTaGATCTGCGTGTGGCATGTGGTCAGGGTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: ISFSMSILLMAQ*ICVWHVVRVWP
Trigger: TGGCCAAACCCTGACCACATGCCACACGCAGATTCACTGTGCCATCAGCAAGATTGACATTGAAAAAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000486873.2
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000620000.1
ENST00000620516.4
CDS TCA 72 bp AAAGTAAAGAACTGCTCTGGGTCAAGACGGCCAGTGTaGGATAGTGAGAATGACTTCTGTAAACCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: KVKNCSGSRRPV*DSENDFCKPSE
Trigger: CTCTGAGGGTTTACAGAAGTCATTCTCACTATCTCACACTGGCCGTCTTGACCCAGAGCAGTTCTTTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CAA 72 bp GGCTGGGTTGAGGTCTTTGCTCAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGTTCGCTTCCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: GWVEVFAQVLLT*MTVCRSSLPKG
Trigger: ACCTTTTGGAAGCGAACTCCTACAAACTGTCATCAATGTTAGCAGAACTTGAGCAAAGACCTCAACCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000495202.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614613.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS CAA 90 bp TCTTCTTCTCATCCCCCAAACATGGGTATTTCTCAAGGTTCTGCTTaGGCAGGCAGTGCAGAACAGATCAAAGCTTGGACTAAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSSHPPNMGISQGSA*AGSAEQIKAWTKFF
Trigger: AAAGAACTTAGTCCAAGCTTTGATCTGTTCTGCACTGCCTGCCAAAGCAGAACCTTGAGAAATACCCATGTTTGGGGGATGAGAAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS TCA 72 bp CACCTGAAGATGGAATTACTACAAGGATGGCTGGGTTaGGGTCTTTGCTCAAGTTCTGCTAACATTGATGAC +
Preference number: 6 (lower is better)
Translates to: HLKMELLQGWLG*GLCSSSANIDD
Trigger: GTCATCAATGTTAGCAGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGTAGTAATTCCATCTTCAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000495202.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614613.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS TCA 72 bp TATTATACGGACAATCTGTCAGTGGGTCCCTCATGTTaGAATGTGTCTGGCTTTTGTCCTTTCACCTACGCT +
Preference number: 6 (lower is better)
Translates to: YYTDNLSVGPSC*NVSGFCPFTYA
Trigger: AGCGTAGGTGAAAGGACAAAAGCCAGACACATTTCAACATGAGGGACCCACTGACAGATTGTCCGTATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439509.5
ENST00000444448.6
ENST00000458381.6
CDS GCA 72 bp GAGTCACAAATGTGGAGTCGTTTTTGTCATCCTTGTTaGTTTAGAGCTGCTTCACAGTCTGACATGCCTAAC +
Preference number: 6 (lower is better)
Translates to: ESQMWSRFCHPC*FRAASQSDMPN
Trigger: GTTAGGCATGTCAGACTGTGAAGCAGCTCTAAAGCAACAAGGATGACAAAAACGACTCCACATTTGTGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427068.1
ENST00000472260.1
ENST00000613802.1
ENST00000614172.1
CDS CAA 90 bp TACAAGGATGGCTGGGTTGAGGTCTTTGCTCAAGTTCTGCTAACATaGATGACAGTTTGTAGGAGTTCGCTTCCAAAAGGTCTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: YKDGWVEVFAQVLLT*MTVCRSSLPKGLVS
Trigger: TGAAACTAGACCTTTTGGAAGCGAACTCCTACAAACTGTCATCAATGTTAGCAGAACTTGAGCAAAGACCTCAACCCAGCCATCCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000495202.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614613.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS TCA 72 bp AACTCTTTAAGCAGTTTAGAGGGAGGTTTTAGTTGTTaGGTGTGTCTCATTCTGTACTCTGGGGGTGAACAG +
Preference number: 6 (lower is better)
Translates to: NSLSSLEGGFSC*VCLILYSGGEQ
Trigger: CTGTTCACCCCCAGAGTACAGAATGAGACACACTCAACAACTAAAACCTCCCTCTAAACTGCTTAAAGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495202.1
ENST00000614613.1
CDS GCA 72 bp GGCTGTAAGACCAAGGACAAAGTTTTTACCCTCTTGTaGTTCAGTTTATCTCTGGGATCTTGCATCCCTTTT +
Preference number: 6 (lower is better)
Translates to: GCKTKDKVFTLL*FSLSLGSCIPF
Trigger: AAAAGGGATGCAAGATCCCAGAGATAAACTGAAGCACAAGAGGGTAAAAACTTTGTCCTTGGTCTTACAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS CCA 72 bp TCCAAAGAACTTGATCACTGGAGGTTACAACAATCTTaGGTAGCTACCACAGGGCTAGAATTAGACAAAGCA +
Preference number: 6 (lower is better)
Translates to: SKELDHWRLQQS*VATTGLELDKA
Trigger: TGCTTTGTCTAATTCTAGCCCTGTGGTAGCTACCCAAGATTGTTGTAACCTCCAGTGATCAAGTTCTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444448.6
ENST00000458381.6
CDS CCA 72 bp GCAATCTCTCGAGTACCAAAATATAACACCACATTCTaGAAAGTAGGACAGCTTGTAATCACTCCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: AISRVPKYNTTF*KVGQLVITPPV
Trigger: GACTGGAGGAGTGATTACAAGCTGTCCTACTTTCCAGAATGTGGTGTTATATTTTGGTACTCGAGAGATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471833.1
CDS CAA 90 bp AGTTTATTGAGGAGCTTCCGCTTCTCCTTCTCAGTCATAGATTGCTaGGAGCTTTCTACAAGCTGGAAAAGTGCTTCATGTTTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: SLLRSFRFSFSVIDC*ELSTSWKSASCFLV
Trigger: TACCAAGAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAGGAGAAGCGGAAGCTCCTCAATAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000447264.2
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000619846.4
ENST00000620516.4
CDS CAA 90 bp TGTCAGTTTATTGAGGAGCTTCCGCTTCTCCTTCTCAGTCATAGATaGCTTGGAGCTTTCTACAAGCTGGAAAAGTGCTTCATGTTTCTT +
Preference number: 6 (lower is better)
Translates to: CQFIEELPLLLLSHR*LGAFYKLEKCFMFL
Trigger: AAGAAACATGAAGCACTTTTCCAGCTTGTAGAAAGCTCCAAGCAATCTATGACTGAGAAGGAGAAGCGGAAGCTCCTCAATAAACTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000447264.2
ENST00000458381.6
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000619846.4
ENST00000620516.4
CDS CAA 72 bp TTTCTGGCCATTCAAAGAGATGGTTACACACCTTCCTaGTCTTTTGAGGCTTTTTCAATGTCTCTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: FLAIQRDGYTPS*SFEAFSMSLCS
Trigger: ACTGCAGAGAGACATTGAAAAAGCCTCAAAAGACAAGGAAGGTGTGTAACCATCTCTTTGAATGGCCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486873.2
ENST00000620000.1
CDS CAA 90 bp GTGTATAATCACAATGTCACCCTTTTCCAAATTCAACTCATCATCTaGCCTGGCTTGAAAAGAATACAAGGCCTTGCAAAGTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VYNHNVTLFQIQLII*PGLKRIQGLAKSAA
Trigger: AGCAGCAGACTTTGCAAGGCCTTGTATTCTTTTCAAGCCAGGCAAGATGATGAGTTGAATTTGGAAAAGGGTGACATTGTGATTATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000472260.1
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614172.1
ENST00000614842.4
ENST00000618893.1
ENST00000620516.4
CDS TCA 72 bp TGTTGGCTGTACTGGTTTAAGTTATTGCATAAAAGTTaGATTCTTTCCTTCTCCAGCTCCAGAATGCTCTGG +
Preference number: 6 (lower is better)
Translates to: CWLYWFKLLHKS*ILSFSSSRMLW
Trigger: CCAGAGCATTCTGGAGCTGGAGAAGGAAAGAATTCAACTTTTATGCAATAACTTAAACCAGTACAGCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000445023.6
ENST00000447264.2
ENST00000486873.2
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000619846.4
ENST00000620000.1
ENST00000620516.4
CDS CAA 90 bp CTCTCCATATCCCTGGGTTCTGCATCTTTCTTATCACTATTTTCTTaGCTGATTTATCTTCTTCTTCTCATCCCCCAAACATGGGTATTT +
Preference number: 6 (lower is better)
Translates to: LSISLGSASFLSLFS*LIYLLLLIPQTWVF
Trigger: AAATACCCATGTTTGGGGGATGAGAAGAAGAAGATAAATCAGCAAAGAAAATAGTGATAAGAAAGATGCAGAACCCAGGGATATGGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458381.6
CDS CAA 90 bp CATGTAAAGGTAAGAGCACTTTATTCTTATTTGAACCACACTGTATaGTTGATTACCGAGTGTGAAGGTAGTATGTTCAGAGTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: HVKVRALYSYLNHTV*LITECEGSMFRVLF
Trigger: AAACAAGACTCTGAACATACTACCTTCACACTCGGTAATCAACAATACAGTGTGGTTCAAATAAGAATAAAGTGCTCTTACCTTTACATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317647.12
ENST00000444448.6
ENST00000618893.1
CDS TCA 72 bp TTCACACAACTGAAGTTTGATATATGGTTCTTTAAATaGGAAGACCCCTGCCAAATAGCAAAAGCAGATCAA +
Preference number: 6 (lower is better)
Translates to: FTQLKFDIWFFK*EDPCQIAKADQ
Trigger: TTGATCTGCTTTTGCTATTTGGCAGGGGTCTTCTCATTTAAAGAACCATATATCAAACTTCAGTTGTGTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486873.2
ENST00000620000.1
CDS CAA 72 bp AGGCTTTTTCAATGTCTCTCTGCAGTCTCAATAATTTaGGTTTTAGTAAAGACTTTCGTCTCTCTTTATCCA +
Preference number: 6 (lower is better)
Translates to: RLFQCLSAVSII*VLVKTFVSLYP
Trigger: TGGATAAAGAGAGACGAAAGTCTTTACTAAAACCAAAATTATTGAGACTGCAGAGAGACATTGAAAAAGCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000317647.12
ENST00000397206.6
ENST00000397209.6
ENST00000444448.6
ENST00000445023.6
ENST00000458381.6
ENST00000486873.2
ENST00000610364.4
ENST00000610378.4
ENST00000611498.4
ENST00000614842.4
ENST00000618893.1
ENST00000620000.1
ENST00000620516.4