RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOS1AP (Homo sapiens)

Ensembl gene IDs: ENSG00000198929

Ensembl transcript IDs: ENST00000361897.10, ENST00000430120.3, ENST00000454693.1, ENST00000464284.1, ENST00000493151.1, ENST00000530878.5

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATaGAGGTCCTCTGGCTTAGGGGTCGTGGGGTCACAGAGCACGGGC +
Preference number: 1 (lower is better)
Translates to: AGWAKSAKPAPSGGE*RSSGLGVVGSQSTG
Trigger: GCCCGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 90 bp TCTCCCGGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: SPGPWLAFSSAVHIH*ASPTRAAARHGPSS
Trigger: GCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCCGGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 90 bp AAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATGCAGGTCCTCTaGCTTAGGGGTCGTGGGGTCACAGAGCACGGGCAGGGCTCCGGA +
Preference number: 1 (lower is better)
Translates to: KVSQARAQRRRMQVL*LRGRGVTEHGQGSG
Trigger: TCCGGAGCCCTGCCCGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 90 bp AGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATGCAGG +
Preference number: 1 (lower is better)
Translates to: SFTKQSRLPKGLPAG*AKSAKPAPSGGECR
Trigger: CCTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR GCA 90 bp GAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCG +
Preference number: 1 (lower is better)
Translates to: ESTPASPSSRAYLRG*PQGGQSQPSPRPAA
Trigger: CGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR GCA 90 bp TCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTaGGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCAC +
Preference number: 1 (lower is better)
Translates to: SRNLMSSRPPRSASP*AGGGVSSGGRKRKH
Trigger: GTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 90 bp GAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTGCGCTaGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAG +
Preference number: 1 (lower is better)
Translates to: ELDELQTAQERLALR*GRGVLGRKKAKALQ
Trigger: CTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR TCA 90 bp AGCAGGGAGATGTGCTGGAGCATGTCCTTGTTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCCTCCAGCCGCGCCGCAGCCTCAGCA +
Preference number: 1 (lower is better)
Translates to: SREMCWSMSLFCSKS*CTRAWASSRAAASA
Trigger: TGCTGAGGCTGCGGCGCGGCTGGAGGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAACAAGGACATGCTCCAGCACATCTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR TCA 90 bp CTCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTC +
Preference number: 1 (lower is better)
Translates to: LLALVRVGLVLRGDA*LSELDELQTAQERL
Trigger: GAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTaGGGTAGGCTGGGGCAGGCACCAATAAGGTTAGCACCCCTGGTG +
Preference number: 1 (lower is better)
Translates to: SITVGASCARESAGT*GRLGQAPIRLAPLV
Trigger: CACCAGGGGTGCTAACCTTATTGGTGCCTGCCCCAGCCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR GCA 90 bp GAAGCAAGGAGGGAGGACAGGGTGACATCGTCGGGAAATCAGGTCTaGAATGTTCCCTTTCCTGCCCAGTTGGCCCTGATGGAGGGTCGG +
Preference number: 1 (lower is better)
Translates to: EARREDRVTSSGNQV*NVPFPAQLALMEGR
Trigger: CCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTCCTCCCTCCTTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR GCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTaGCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCA +
Preference number: 1 (lower is better)
Translates to: QGDIVGKSGLQCSLS*PVGPDGGSVAGDPS
Trigger: TGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 90 bp TTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTaGCAATGGCTGTGGTCCCTGACCCAAGTGGCAGTGATTCAGAAG +
Preference number: 1 (lower is better)
Translates to: LYVCSRHARREMGQG*QWLWSLTQVAVIQK
Trigger: CTTCTGAATCACTGCCACTTGGGTCAGGGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR TCA 90 bp GGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGA +
Preference number: 1 (lower is better)
Translates to: GLGNSQHRDIQKQST*EGTDGFPSWSGPWR
Trigger: TCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCTGCGAGTTGCCTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR TCA 90 bp GCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTaGACCATGTTAAAGCTTCAAGGCTCCCTTTGTAGCAACATTCAA +
Preference number: 1 (lower is better)
Translates to: AADKLSSPWALTPRA*TMLKLQGSLCSNIQ
Trigger: TTGAATGTTGCTACAAAGGGAGCCTTGAAGCTTTAACATGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 90 bp TCCCACACAAGCCCTCTCCATCCACATTCCATACACCTAATCCACTaGCCTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAG +
Preference number: 1 (lower is better)
Translates to: SHTSPLHPHSIHLIH*PLALSSAPAYVRKQ
Trigger: CTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAGGCCAGTGGATTAGGTGTATGGAATGTGGATGGAGAGGGCTTGTGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR TCA 90 bp TCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTaGTATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: SSHKGRGRVRQLAAS*YPETKYLRRYRWLP
Trigger: GGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 90 bp CTAGATCTGTCCTTTGTCTCCCATCTCCACACACCAAGTATGCGCTaGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCT +
Preference number: 1 (lower is better)
Translates to: LDLSFVSHLHTPSMR*FGSTGEDTNTQTSP
Trigger: AGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAAAGGACAGATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 90 bp ACTGTGACACATTCCAATTCCATGCTCACCCTACAAGGACTAGCCTaGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAG +
Preference number: 1 (lower is better)
Translates to: TVTHSNSMLTLQGLA*LLRSRALNLYNLSK
Trigger: CTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAGGGTGAGCATGGAATTGGAATGTGTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 90 bp CAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATaGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCT +
Preference number: 1 (lower is better)
Translates to: QEETTMEHPKGRSLG*VPKSATQITSFSNS
Trigger: AGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 90 bp TTTAATCTCAATATACAGTCCATCCAGTGCAGAGAAATTCTTTCCTaGCTCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: FNLNIQSIQCREILS*LHNCGSLLCTRVCW
Trigger: CCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGAGCCAGGAAAGAATTTCTCTGCACTGGATGGACTGTATATTGAGATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR CCA 90 bp CTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTTCCGTCTaGTTACAATCCTACATATATGTACACACTTTCCCTCACACATGT +
Preference number: 1 (lower is better)
Translates to: LLLIQTPWRSSFFSV*LQSYIYVHTFPHTC
Trigger: ACATGTGTGAGGGAAAGTGTGTACATATATGTAGGATTGTAACCAGACGGAAAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 90 bp GTTCAAAATCTTAATAATCTAAGTGGTCTTGGACTCAGGGAACCCTaGGTTAGATTTCATAAGCTAGGTAGGCTCAGCCACACTGGATTC +
Preference number: 1 (lower is better)
Translates to: VQNLNNLSGLGLREP*VRFHKLGRLSHTGF
Trigger: GAATCCAGTGTGGCTGAGCCTACCTAGCTTATGAAATCTAACCCAGGGTTCCCTGAGTCCAAGACCACTTAGATTATTAAGATTTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR GCA 90 bp AATATAAGGAATATAATTTTTAATCTCAATATACAGTCCATCCAGTaGAGAGAAATTCTTTCCTGGCTCCATAACTGTGGGAGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: NIRNIIFNLNIQSIQ*REILSWLHNCGSLL
Trigger: CAGGAGGCTCCCACAGTTATGGAGCCAGGAAAGAATTTCTCTGCACTGGATGGACTGTATATTGAGATTAAAAATTATATTCCTTATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR CCA 90 bp AAATGCATGTTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTaGAGATCCTCGTTCTTTTCCGTCTGGTTACAATCCTACATATAT +
Preference number: 1 (lower is better)
Translates to: KCMLENTNLLLIQTP*RSSFFSVWLQSYIY
Trigger: ATATATGTAGGATTGTAACCAGACGGAAAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAACATGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR GCA 90 bp AGGCGCGGCAGCTCCTCCTGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGT +
Preference number: 2 (lower is better)
Translates to: RRGSSSWDHESRSSLSSVAYLRG*PQGGQS
Trigger: ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGC...CACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR TCA 90 bp CAGGCGCGGCAGCTCCTCCTGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTCTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAG +
Preference number: 2 (lower is better)
Translates to: QARQLLLGPRVALLALVRLRGDA*LSELDE
Trigger: CTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAG...ACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CAA 90 bp TCCGTGTTGGACTCGTACTCCGAGGCGATGCCTGACTCTCGGAACTaGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTGCGCTGGG +
Preference number: 2 (lower is better)
Translates to: SVLDSYSEAMPDSRN*MSSRPPRSASPCAG
Trigger: CCCAGCGCAGGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR TCA 90 bp GCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGCTCCTCTTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: AVAQFLPLQDIQQARQLLFCSKS*CTRAWA
Trigger: GGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAA...GAGGAGCTGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR GCA 90 bp CAGGCGCGGCAGCTCCTCCTGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTTCCAGCTCTTGCACCTaGTTGACCAGCAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: QARQLLLGPRVALLALVRSSSCT*LTSREM
Trigger: CATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCTGGA...ACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR CCA 90 bp GCGATCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCCGCGGCAGCTCCTCCTaGGACCACGAGTCGCGCTCC +
Preference number: 2 (lower is better)
Translates to: AISSSRPSPSSCLCRTFSRGSSS*DHESRS
Trigger: GGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCG...GCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGATCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR GCA 90 bp AGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGTTCAGTTCCAGCTCTTaGACCTGCTTGACCAGCAGG +
Preference number: 2 (lower is better)
Translates to: SASPCAGGGVSSGGRKRKFSSSS*TCLTSR
Trigger: CCTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAA...CTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR CCA 90 bp GGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: GVSSGGRKRKHSSFTKQSGLPAG*AKSAKP
Trigger: GGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCC...CGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR CCA 90 bp CATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCATCCAGCAAGCTGTCCTaGGAGCCCATGGCGTTCTGT +
Preference number: 2 (lower is better)
Translates to: HPGRRPVPASAGHSAGAASSKLS*EPMAFC
Trigger: ACAGAACGCCATGGGCTCCCAGGACAGCTTGCTGGA...TGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CAA 90 bp AGCTCCTCCTGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTaGGACTCGTACTCCGAGGCGATGCCTGACTCTCGGAACTTGATG +
Preference number: 2 (lower is better)
Translates to: SSSWDHESRSSLSSV*DSYSEAMPDSRNLM
Trigger: CATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCAGGAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR TCA 90 bp GCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCTCCGGAGCGGAAGGTaGTCTCCAGCAAGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: AGCPRAEESESTPASPSSLRSGR*SPASCP
Trigger: AGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAG...ACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR GCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGCATTCTCCTCGGCAGTaGACATTCACTGGGCATCCC +
Preference number: 2 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLHSPRQ*TFTGHP
Trigger: GGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATG...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR GCA 90 bp CATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAACCAGCAGGGAGATGTaGTGGAGCATGTCCTTGTTC +
Preference number: 2 (lower is better)
Translates to: HPGRRPVPASAGHSAGAATSREM*WSMSLF
Trigger: GAACAAGGACATGCTCCAGCACATCTCCCTGCTGGT...TGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR CCA 90 bp GAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGTGTCCTGGGAGCCCATaGCGTTCTGTCCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: ESTPASPSSRAYLRGCPQCPGSP*RSVLTA
Trigger: AGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACA...CTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR CCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGGTCCTCCAGCAGCCTaGCAGTCCTGGAGAGAGACC +
Preference number: 2 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRGPPAA*QSWRET
Trigger: GGTCTCTCTCCAGGACTGCCAGGCTGCTGGAGGACC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGACCACCACTGCCCAGTaGAGGGGACAGGTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRTTTAQ*RGQVER
Trigger: CCTCTCAACCTGTCCCCTCCACTGGGCAGTGGTGGT...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGGCCAAGGGTGGCAATaGCTGTGGTCCCTGACCCAA +
Preference number: 2 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRGQGWQ*LWSLTQ
Trigger: TTGGGTCAGGGACCACAGCCATTGCCACCCTTGGCC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CAA 90 bp ACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTaGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCC +
Preference number: 2 (lower is better)
Translates to: TSSGNQVCNVPFPAQ*ALMEGRWLVILQGS
Trigger: GGAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR GCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTGGGGTAGGTCCACACACCAAGTATaGGCTGGTTTGGGTCCACTG +
Preference number: 2 (lower is better)
Translates to: SITVGASCARESAGTWGRSTHQV*AGLGPL
Trigger: CAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGA...CCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR-3UTR CCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAACTCCCGGGCCCTGGCTaGCATTCTCCTCGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQLPGPG*HSPRQC
Trigger: GCACTGCCGAGGAGAATGCCAGCCAGGGCCCGGGAG...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGGTCCTCCAGCAGCCTaGCAGTCCTGGAGAGAGACC +
Preference number: 2 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMGPPAA*QSWRET
Trigger: GGTCTCTCTCCAGGACTGCCAGGCTGCTGGAGGACC...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGGTCCTCCAGCAGCCTaGCAGTCCTGGAGAGAGACC +
Preference number: 2 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDGPPAA*QSWRET
Trigger: GGTCTCTCTCCAGGACTGCCAGGCTGCTGGAGGACC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp CTGGGGCAGGCACCAATAAGGTTAGCACCCCTGGTGTCCATTTGTCCTCCATATAAGCTGTCCTCCCCCTaGGCTCTCACACCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: LGQAPIRLAPLVSICPPYKLSSP*ALTPRA
Trigger: GGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTT...ATATGGAGGACAAATGGACACCAGGGGTGCTAACCTTATTGGTGCCTGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR-3UTR CCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAAAGCTGTCCTCCCCCTaGGCTCTCACACCAAGGGCC +
Preference number: 2 (lower is better)
Translates to: LFICVLKARTQRDGPRVAKLSSP*ALTPRA
Trigger: GGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTT...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp GTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTAGCAGGGAGATGTGCTaGAGCATGTCCTTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: VLGRKKAKALQLHQAVAPSREMC*SMSLFC
Trigger: GCAGAACAAGGACATGCTCCAGCACATCTCCCTGCT...AGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR GCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGTTCAGAGAGGTAAAGTaGTGCAAAAGCTTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLFREVK*CKSFSW
Trigger: CCAGCTGAAGCTTTTGCAGCACTTTACCTCTCTGAA...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCA +
Preference number: 2 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVAVHIH*ASPTRA
Trigger: TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGC...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCA +
Preference number: 2 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDAVHIH*ASPTRA
Trigger: TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTCTCCCGGGCCCTGGCTaGCATTCTCCTCGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPLPGPG*HSPRQC
Trigger: GCACTGCCGAGGAGAATGCCAGCCAGGGCCCGGGAG...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCATCTCAGCAAGGGCCTaGAGAAGGAATTCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: CSRHARREMGQGWQWLWSISARA*RRNSSH
Trigger: ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAATCTCAGCAAGGGCCTaGAGAAGGAATTCCTCTCAT +
Preference number: 2 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPISARA*RRNSSH
Trigger: ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGGGGCTCTGGTCCTCTaGGGCTTTCAGAGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRGALVL*GFQRGK
Trigger: TTTACCTCTCTGAAAGCCCCAGAGGACCAGAGCCCC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp CTGGGGCAGGCACCAATAAGGTTAGCACCCCTGGTGTCCATTTGTCCTCCATATACCACCACTGCCCAGTaGAGGGGACAGGTTGAGAGG +
Preference number: 2 (lower is better)
Translates to: LGQAPIRLAPLVSICPPYTTTAQ*RGQVER
Trigger: CCTCTCAACCTGTCCCCTCCACTGGGCAGTGGTGGT...ATATGGAGGACAAATGGACACCAGGGGTGCTAACCTTATTGGTGCCTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR-3UTR CCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTGAGATGGGCCAAGGGTaGCAATGGCTGTGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVEMGQG*QWLWSL
Trigger: CAGGGACCACAGCCATTGCCACCCTTGGCCCATCTC...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR TCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCGGAATCAGATCTAAGTaGTTTGGAGCAGCAGACAAG +
Preference number: 2 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLGIRSK*FGAADK
Trigger: CTTGTCTGCTGCTCCAAATCACTTAGATCTGATTCC...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR TCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTAGGGTCGGTGGCTGGTaGTCCTTCAAGGCTCCTAGA +
Preference number: 2 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVRVGGW*SFKAPR
Trigger: TCTAGGAGCCTTGAAGGATCACCAGCCACCGACCCT...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR GCA 90 bp GACAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGGGAGCTTTTCCTCATTaGCCCAGCCAGCCCGTTAAG +
Preference number: 2 (lower is better)
Translates to: DRVTSSGNQVCNVPFPAQGAFPH*PSQPVK
Trigger: CTTAACGGGCTGGCTGGGGCAATGAGGAAAAGCTCC...CTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCGGACTCAGGGAACCCTaGGTTAGATTTCATAAGCTA +
Preference number: 2 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLGLREP*VRFHKL
Trigger: TAGCTTATGAAATCTAACCCAGGGTTCCCTGAGTCC...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAACAAGGGCAGGAGTCTTaGATGGGTCCCAAAGTCAGC +
Preference number: 2 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQQGQES*MGPKVS
Trigger: GCTGACTTTGGGACCCATCCAAGACTCCTGCCCTTG...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR TCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGAGAGACCCTCTCCTaGAGCCATGGGCTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVRETLS*SHGLWK
Trigger: CTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCT...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR TCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCAAAGCTTATCCACTGTaGCACATTCCAATTCCATGC +
Preference number: 2 (lower is better)
Translates to: CSRHARREMGQGWQWLWSKAYPL*HIPIPC
Trigger: GCATGGAATTGGAATGTGTCACAGTGGATAAGCTTT...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR GCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATTCTCCTCGGCAGTaGACATTCACTGGGCATCCC +
Preference number: 2 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDHSPRQ*TFTGHP
Trigger: GGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATG...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACATCACGGACAAAGCGTaGGAGCCTGACGATGCAGCA +
Preference number: 2 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNITDKA*EPDDAA
Trigger: TGCTGCATCGTCAGGCTCCCACGCTTTGTCCGTGAT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR GCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCATTCTCCTCGGCAGTaGACATTCACTGGGCATCCC +
Preference number: 2 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLHSPRQ*TFTGHP
Trigger: GGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATG...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp TATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGATCACGGACAAAGCGTaGGAGCCTGACGATGCAGCA +
Preference number: 2 (lower is better)
Translates to: YPETKYLRRYRWLPFLVGITDKA*EPDDAA
Trigger: TGCTGCATCGTCAGGCTCCCACGCTTTGTCCGTGAT...CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR TCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGAAAGCTTATCCACTGTaGCACATTCCAATTCCATGC +
Preference number: 2 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWKAYPL*HIPIPC
Trigger: GCATGGAATTGGAATGTGTCACAGTGGATAAGCTTT...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCTGAGAAGGTACCGATaGCTTCCCTTCCTGGTCGGG +
Preference number: 2 (lower is better)
Translates to: EHSISTISARAWRRNSSHLRRYR*LPFLVG
Trigger: CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCTGCAAAAGCTTCAGCTaGACAGGACACAGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLCKSFS*TGHRGG
Trigger: ACCTCCCCTGTGTCCTGTCCAGCTGAAGCTTTTGCA...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CAA 90 bp ACACATTCCAATTCCATGCTCACCCTACAAGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: THSNSMLTLQGLAWL*RSRALNLYNLSKGL
Trigger: CAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAGGGTGAGCATGGAATTGGAATGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CAA 90 bp ATCTGTCCTTTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTaGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: ICPLSPISTHQVCAG*GPLGRIPIHKLVLQ
Trigger: CTGGAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAAAGGACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCA +
Preference number: 2 (lower is better)
Translates to: GIIISLPIDPPITLQFASAVHIH*ASPTRA
Trigger: TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGC...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTGAGCTGATTCACCTCTaGGAATCCGATTTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVELIHL*ESDFFP
Trigger: GGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTC...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR TCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCATCTCAATACTTTCCTaGAACCTCACACTCTCCCGG +
Preference number: 2 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFISILS*NLTLSR
Trigger: CCGGGAGAGTGTGAGGTTTCAGGAAAGTATTGAGAT...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR TCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTCAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVQKQST*EGTDGF
Trigger: GAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTG...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR TCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIQKQST*EGTDGF
Trigger: GAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTG...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCTTTTGCAGTAAAAACTaGCCACCACTGCCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLFCSKN*PPLPSG
Trigger: TCCACTGGGCAGTGGTGGTCAGTTTTTACTGCAAAA...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAAGAGCTGATTCACCTCTaGGAATCCGATTTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKELIHL*ESDFFP
Trigger: GGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTC...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTGTTAACAGCCACTTATaGCCTTACAGGAGCAAAGGA +
Preference number: 2 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVVNSHL*PYRSKG
Trigger: TCCTTTGCTCCTGTAAGGCCATAAGTGGCTGTTAAC...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTGGGGTAGGGACTTTTCACTCCTCTaGACGTTCAAAATCTTAATA +
Preference number: 2 (lower is better)
Translates to: SITVGASCARESAGTWGRDFSLL*TFKILI
Trigger: TATTAAGATTTTGAACGTCCAGAGGAGTGAAAAGTC...CCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR-3UTR GCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCAGAGAGGTAAAGTGCTaGAAAAGCTTCAGCTGGACA +
Preference number: 2 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLREVKC*KSFSWT
Trigger: TGTCCAGCTGAAGCTTTTGCAGCACTTTACCTCTCT...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTGGGGCTCTGGTCCTCTaGGGCTTTCAGAGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: GIIISLPIDPPITLQFASGALVL*GFQRGK
Trigger: TTTACCTCTCTGAAAGCCCCAGAGGACCAGAGCCCC...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCGGACTCAGGGAACCCTaGGTTAGATTTCATAAGCTA +
Preference number: 2 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGGLREP*VRFHKL
Trigger: TAGCTTATGAAATCTAACCCAGGGTTCCCTGAGTCC...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR GCA 90 bp CGAACATATGACTCTAGCAGGTCTCAGCAATCTCTTCAGGCATTTGAAAATCTGGGAGCTTTTCCTCATTaGCCCAGCCAGCCCGTTAAG +
Preference number: 2 (lower is better)
Translates to: RTYDSSRSQQSLQAFENLGAFPH*PSQPVK
Trigger: CTTAACGGGCTGGCTGGGGCAATGAGGAAAAGCTCC...CAGATTTTCAAATGCCTGAAGAGATTGCTGAGACCTGCTAGAGTCATATGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTACTGAGAAGGTACCGATaGCTTCCCTTCCTGGTCGGG +
Preference number: 2 (lower is better)
Translates to: LGWVPKSATQITSFSNSLLRRYR*LPFLVG
Trigger: CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAG...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR TCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTATCTCAATACTTTCCTaGAACCTCACACTCTCCCGG +
Preference number: 2 (lower is better)
Translates to: SIVISRNKVPEKVPMASLISILS*NLTLSR
Trigger: CCGGGAGAGTGTGAGGTTTCAGGAAAGTATTGAGAT...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CAA 90 bp AGGAAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTaGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTGTACCT +
Preference number: 2 (lower is better)
Translates to: RKARVDELHFGIIIS*PIDPPITLQFASVP
Trigger: AGGTACAGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR TCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTACAACTCGCAGCATCGTaGTATCCAGAAACAAAGTAC +
Preference number: 2 (lower is better)
Translates to: LGWVPKSATQITSFSNSLQLAAS*YPETKY
Trigger: GTACTTTGTTTCTGGATATCACGATGCTGCGAGTTG...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CCA 90 bp ACTTACATTAACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACATCGTTCTTTTCCGTCTaGTTACAATCCTACATATAT +
Preference number: 2 (lower is better)
Translates to: TYINRIFSQRVDPTELMTSFFSV*LQSYIY
Trigger: ATATATGTAGGATTGTAACCAGACGGAAAAGAACGA...TGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTTAATGTAAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR CCA 72 bp AAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: KQSRLPKGLPAG*AKSAKPAPSGG
Trigger: GCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 72 bp GAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTGCGCTaGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAA +
Preference number: 3 (lower is better)
Translates to: ELQTAQERLALR*GRGVLGRKKAK
Trigger: TTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGGCGGTCTGGAGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 72 bp CAAGCCCGCGCCCAGCGGCGGCGAATGCAGGTCCTCTaGCTTAGGGGTCGTGGGGTCACAGAGCACGGGCAG +
Preference number: 3 (lower is better)
Translates to: QARAQRRRMQVL*LRGRGVTEHGQ
Trigger: CTGCCCGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGGCGCGGGCTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR GCA 72 bp GCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATaGAGGTCCTCTGGCTTAGGGGTCGTGGGGTCACAG +
Preference number: 3 (lower is better)
Translates to: AKSAKPAPSGGE*RSSGLGVVGSQ
Trigger: CTGTGACCCCACGACCCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR GCA 72 bp CCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGC +
Preference number: 3 (lower is better)
Translates to: PASPSSRAYLRG*PQGGQSQPSPR
Trigger: GCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 72 bp CCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCAGCAGCCAGACACGGC +
Preference number: 3 (lower is better)
Translates to: PWLAFSSAVHIH*ASPTRAAARHG
Trigger: GCCGTGTCTGGCTGCTGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 72 bp GGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTTaGACTCGTACTCCGAGGCGATGCCTGACTCTCGGA +
Preference number: 3 (lower is better)
Translates to: GTTSRAPRSRPC*TRTPRRCLTLG
Trigger: TCCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR TCA 72 bp ATGTGCTGGAGCATGTCCTTGTTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCCTCCAGCCGCGCCGCA +
Preference number: 3 (lower is better)
Translates to: MCWSMSLFCSKS*CTRAWASSRAA
Trigger: TGCGGCGCGGCTGGAGGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAACAAGGACATGCTCCAGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CCA 72 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTaGCAATGGCTGTGGTCCCTGACCCAAGTGGCAGTG +
Preference number: 3 (lower is better)
Translates to: CSRHARREMGQG*QWLWSLTQVAV
Trigger: CACTGCCACTTGGGTCAGGGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR TCA 72 bp CTCGTCCGTGTTGGACTCGTACTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAGCTCCAGACCGCCCAG +
Preference number: 3 (lower is better)
Translates to: LVRVGLVLRGDA*LSELDELQTAQ
Trigger: CTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR-3UTR CAA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAAT +
Preference number: 3 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPGLAWL*RSRALN
Trigger: ATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCC...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CAA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAAT +
Preference number: 3 (lower is better)
Translates to: CSRHARREMGQGWQWLWSGLAWL*RSRALN
Trigger: ATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCC...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CAA 90 bp GGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGAGCTCTTGCACCTGCTaGACCAGCAGGGAGATGTGC +
Preference number: 3 (lower is better)
Translates to: GVSSGGRKRKHSSFTKQSSSCTC*TSREMC
Trigger: GCACATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCT...CGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR GCA 72 bp ATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTaGCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: IVGKSGLQCSLS*PVGPDGGSVAG
Trigger: ACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CAA 90 bp AGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCTTCAGTTCCAGCTCTaGCACCTGCTTGACCAGCAG +
Preference number: 3 (lower is better)
Translates to: RKRKHSSFTKQSRLPKGLLQFQL*HLLDQQ
Trigger: CTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAAG...CAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR GCA 72 bp AGGGAGGACAGGGTGACATCGTCGGGAAATCAGGTCTaGAATGTTCCCTTTCCTGCCCAGTTGGCCCTGATG +
Preference number: 3 (lower is better)
Translates to: REDRVTSSGNQV*NVPFPAQLALM
Trigger: CATCAGGGCCAACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR TCA 72 bp AAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTaGACCATGTTAAAGCTTCAAGGCTCCCTTTGTAGC +
Preference number: 3 (lower is better)
Translates to: KLSSPWALTPRA*TMLKLQGSLCS
Trigger: GCTACAAAGGGAGCCTTGAAGCTTTAACATGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 72 bp AGCCCTCTCCATCCACATTCCATACACCTAATCCACTaGCCTCTGGCTTTATCCTCAGCTCCGGCTTACGTC +
Preference number: 3 (lower is better)
Translates to: SPLHPHSIHLIH*PLALSSAPAYV
Trigger: GACGTAAGCCGGAGCTGAGGATAAAGCCAGAGGCCAGTGGATTAGGTGTATGGAATGTGGATGGAGAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CAA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAAGGGATAATCATATCCTaGCCGATTGACCCTCCAATA +
Preference number: 3 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQGIIIS*PIDPPI
Trigger: TATTGGAGGGTCAATCGGCAAGGATATGATTATCCC...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR TCA 72 bp AACTCGCAGCATCGTGATATCCAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGA +
Preference number: 3 (lower is better)
Translates to: NSQHRDIQKQST*EGTDGFPSWSG
Trigger: TCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCTGCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR TCA 72 bp AAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTaGTATCCAGAAACAAAGTACCTGAGAAGGTACCGA +
Preference number: 3 (lower is better)
Translates to: KGRGRVRQLAAS*YPETKYLRRYR
Trigger: TCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR-3UTR CAA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCTCAGATCTAAGTGATTaGGAGCAGCAGACAAGCTGT +
Preference number: 3 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGSDLSD*EQQTSC
Trigger: ACAGCTTGTCTGCTGCTCCAAATCACTTAGATCTGA...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 72 bp CATTCCAATTCCATGCTCACCCTACAAGGACTAGCCTaGCTTTTGCGGTCCAGAGCACTCAATCTCTACAAT +
Preference number: 3 (lower is better)
Translates to: HSNSMLTLQGLA*LLRSRALNLYN
Trigger: ATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAGGGTGAGCATGGAATTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CCA 72 bp AATATACAGTCCATCCAGTGCAGAGAAATTCTTTCCTaGCTCCATAACTGTGGGAGCCTCCTGTGCACGAGA +
Preference number: 3 (lower is better)
Translates to: NIQSIQCREILS*LHNCGSLLCTR
Trigger: TCTCGTGCACAGGAGGCTCCCACAGTTATGGAGCCAGGAAAGAATTTCTCTGCACTGGATGGACTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR CCA 72 bp CTTAATAATCTAAGTGGTCTTGGACTCAGGGAACCCTaGGTTAGATTTCATAAGCTAGGTAGGCTCAGCCAC +
Preference number: 3 (lower is better)
Translates to: LNNLSGLGLREP*VRFHKLGRLSH
Trigger: GTGGCTGAGCCTACCTAGCTTATGAAATCTAACCCAGGGTTCCCTGAGTCCAAGACCACTTAGATTATTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 72 bp ATTCAAACACCCTGGAGATCCTCGTTCTTTTCCGTCTaGTTACAATCCTACATATATGTACACACTTTCCCT +
Preference number: 3 (lower is better)
Translates to: IQTPWRSSFFSV*LQSYIYVHTFP
Trigger: AGGGAAAGTGTGTACATATATGTAGGATTGTAACCAGACGGAAAAGAACGAGGATCTCCAGGGTGTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CCA 72 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTaGAGATCCTCGTTCTTTTCCGTCTGGTTACAATCC +
Preference number: 3 (lower is better)
Translates to: LENTNLLLIQTP*RSSFFSVWLQS
Trigger: GGATTGTAACCAGACGGAAAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR-3UTR CAA 90 bp AACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACACAACAGCTTGGGATAATCATATCCTaGCCGATTGACCCTCCAATA +
Preference number: 3 (lower is better)
Translates to: NRIFSQRVDPTELMTQQLGIIIS*PIDPPI
Trigger: TATTGGAGGGTCAATCGGCAAGGATATGATTATCCC...AAGCTGTTGTGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
3UTR GCA 72 bp AATATAATTTTTAATCTCAATATACAGTCCATCCAGTaGAGAGAAATTCTTTCCTGGCTCCATAACTGTGGG +
Preference number: 3 (lower is better)
Translates to: NIIFNLNIQSIQ*REILSWLHNCG
Trigger: CCCACAGTTATGGAGCCAGGAAAGAATTTCTCTGCACTGGATGGACTGTATATTGAGATTAAAAATTATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTGGGAGCGGTGGGGCTTaGGGCCCGAAGCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: HPLPGQQPDTAPPATPPPGSGGA*GPKRDW
Trigger: CCAGTCCCGCTTCGGGCCGCAAGCCCCACCGCTCCC...AGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGATG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CGCCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAACCTCTGCAGTGGCCGTaGAGGCCCTCTCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPGAPRPALGAGCPRAEEPLQWP*RPSRLQ
Trigger: CTGGAGCCGAGAGGGCCTCCACGGCCACTGCAGAGG...TTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp CCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATGCAGGCCCTCTCGGCTCCAGTaGGCTGGCGGCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PAGWAKSAKPAPSGGECRPSRLQ*AGGLGL
Trigger: GAGACCCAGGCCGCCAGCTCACTGGAGCCGAGAGGG...CCTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp CATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCTCCAGGGAGGGCCTaGACTGGGGAAAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: HPLPGQQPDTAPPATPPPPPGRA*TGERVA
Trigger: CGCCACCCTTTCCCCAGTTCAGGCCCTCCCTGGAGG...AGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCCTGTCACGGAGACGCTaGATCAGCCGCCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISLSRRR*ISRQRA
Trigger: CGCTCGCTGGCGGCTGATCCAGCGTCTCCGTGACAG...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp CGCCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAATTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RPGAPRPALGAGCPRAEEFCSKS*CTRAWA
Trigger: GGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAA...TTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISAYLRG*PQGGQS
Trigger: ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGC...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTGGTCCTCCAGCAGCCTaGCAGTCCTGGAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: HPLPGQQPDTAPPATPPPGPPAA*QSWRET
Trigger: GGTCTCTCTCCAGGACTGCCAGGCTGCTGGAGGACC...AGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCGGTCCTCCAGCAGCCTaGCAGTCCTGGAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLGPPAA*QSWRET
Trigger: GGTCTCTCTCCAGGACTGCCAGGCTGCTGGAGGACC...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCTCCGGAGCGGAAGGTaGTCTCCAGCAAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRSASPCAGGGVSSGGRKLRSGR*SPASCP
Trigger: AGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAG...CTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCAGGACACAGGGGAGGTaGGGGGCAATTCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISRTQGR*GAIPSF
Trigger: GAAGCTGGGAATTGCCCCTCACCTCCCCTGTGTCCT...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCAAGGCGTCCTCGTTGTaGAAGGGGATCCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLKASSL*KGIRRS
Trigger: CGACCTGCGGATCCCCTTGCACAACGAGGACGCCTT...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCCCGTCGCCCAGTTCCTaGCTCTGCAGGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISPSPSS*LCRTFS
Trigger: GCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGG...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CGCCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAAGGGAGCAGCATCCTaGGTGAGGCTGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: RPGAPRPALGAGCPRAEEKGAAS*VRLSAW
Trigger: CCATGCTGACAGCCTCACCCAGGATGCTGCTCCCTT...TTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCGGGAGCGGTGGGGCTTaGGGCCCGAAGCGGGACTGG +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTGSGGA*GPKRDW
Trigger: CCAGTCCCGCTTCGGGCCGCAAGCCCCACCGCTCCC...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCTGGCCTCAAAGCAGATaGCGTGCTGGAAGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLWPQSR*RAGRRP
Trigger: AGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCA...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp TCCTCTGGCTTAGGGGTCGTGGGGTCACAGAGCACGGGCAGGGCTCCGGAGCGGCCCAGCGGCGGCGAATaGAGGTCCTCTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SSGLGVVGSQSTGRAPERPSGGE*RSSGLG
Trigger: CCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGG...CCGCTCCGGAGCCCTGCCCGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCTCTGTGCCCAGGCCTaGAGGCTTCGAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PRSASPCAGGGVSSGGRKLCAQA*RLRGRR
Trigger: TCTTCTTCCTCGAAGCCTCCAGGCCTGGGCACAGAG...CTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCCTGAGAAGGTACCGATaGCTTCCCTTCCTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISLRRYR*LPFLVG
Trigger: CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAG...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATGCAGGACCTTGGAGCCTGTGTaGGAGCCTCCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PAGWAKSAKPAPSGGECRTLEPV*EPPSFP
Trigger: AGGGAAGGAAGGAGGCTCTCACACAGGCTCCAAGGT...CCTGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCTCAAAGCAGATGCCGTaGTGGAAGGCGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISSKQMP*WKASSL
Trigger: CAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGA...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGGGTCTCCTGAGCTGTTaGTGTTCCTCTCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PRSASPCAGGGVSSGGRKGLLSC*CSSRSL
Trigger: GAGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACC...CTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp AGGCGCGGCAGCTCCTCCTGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTGTGTCTGCTGCTGCTaGTGCTGGAGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRGSSSWDHESRSSLSSVCVCCC*CWRSCW
Trigger: CCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACA...CACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCAAAACTGACCACCACTaGCCAGTGGAGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLKTDHH*PVEGTG
Trigger: ACCTGTCCCCTCCACTGGGCAGTGGTGGTCAGTTTT...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCAAAACTGACCACCACTaGCCAGTGGAGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISKTDHH*PVEGTG
Trigger: ACCTGTCCCCTCCACTGGGCAGTGGTGGTCAGTTTT...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCGGAGCTTTTCCTCATTaGCCCAGCCAGCCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLGAFPH*PSQPVK
Trigger: CTTAACGGGCTGGCTGGGGCAATGAGGAAAAGCTCC...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp AGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCGCTCTCGTCCGTGTTaGACTCGTACTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SASPCAGGGVSSGGRKRKRSRPC*TRTPRR
Trigger: TCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCG...CTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp ATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCCGCGGCAGCTCCTCCTaGGACCACGAGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MPDSRNLMSSRPPRSASPRGSSS*DHESRS
Trigger: GGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCG...GGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCATCTTCCTGGCCATCTaGATTCTGCTGCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLIFLAI*ILLRVL
Trigger: CAGCACACGCAGCAGAATGCAGATGGCCAGGAAGAT...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp TGCCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATGCAACAGCCACTTGTGTCTaGTGCTGCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CPQGGQSQPSPRPAAANATATCV*CCCCWR
Trigger: CCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGT...TGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CCCAGGAGCGCCTCGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGACCAGCAGGGAGATGTaGTGGAGCATGTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PRSASPCAGGGVSSGGRKTSREM*WSMSLF
Trigger: GAACAAGGACATGCTCCAGCACATCTCCCTGCTGGT...CTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCGAGGCGCTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTGGGGTAGGAGGGGAGACTGGAGCTaGGCGCGGCGACGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: SITVGASCARESAGTWGRRGDWS*ARRRVA
Trigger: CGCCACGCGTCGCCGCGCCCAGCTCCAGTCTCCCCT...CCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp CATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTGGCTTCCTACGTACTTaGCCTCAAAGCAGATGCCGT +
Preference number: 4 (lower is better)
Translates to: HPLPGQQPDTAPPATPPPGFLRT*PQSRCR
Trigger: ACGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCC...AGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp GCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ASPSSRAYLRGCPQGGQSGLPAG*AKSAKP
Trigger: GGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCC...ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp GGGTCACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGGCGGCCTGGGTCTCCTaGGCTGTTGCTGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSQSTGRAPERKVISSKLAAWVS*AVAVPL
Trigger: GAGAGGAACAGCAACAGCTCAGGAGACCCAGGCCGC...CAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGTGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp GGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGCTCCTCTCCTCCATCAGAAGTaGGGGCAGGGCCAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRRPVPASAGHSAGAAAPLLHQK*GQGQAE
Trigger: TTCAGCCTGGCCCTGCCCTCACTTCTGATGGAGGAG...AGGAGCTGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGCTCCTCCGTCGCCCAGTTCCTaGCTCTGCAGGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: GRRPVPASAGHSAGAAAPPSPSS*LCRTFS
Trigger: GCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGG...AGGAGCTGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCTCGGGAAATCAGGTCTaGAATGTTCCCTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLSGNQV*NVPFPA
Trigger: GGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGA...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGTCCTGGTCTCCACCCTGCTGTTaGGCCTTGGCACGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: QSTGRAPERKVISSKLSWSPPCC*ALARPG
Trigger: GCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGA...CCAGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCATGCAGGCTCAGCTTGTaGCAGACCTCAAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPALGAGCPRAEESESTPCRLSL*QTSKAC
Trigger: GCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCA...TGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp ATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTCGGCTCCAGTGAGCTaGCGGCCTGGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: MPDSRNLMSSRPPRSASPSAPVS*RPGSPE
Trigger: CTCAGGAGACCCAGGCCGCCAGCTCACTGGAGCCGA...GGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CAA 72 bp GACTCGTACTCCGAGGCGATGCCTGACTCTCGGAACTaGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: DSYSEAMPDSRN*MSSRPPRSASP
Trigger: GGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAGTACGAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
3UTR CAA 72 bp TGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTaGGACTCGTACTCCGAGGCGATGCCTGACTCTCGG +
Preference number: 4 (lower is better)
Translates to: WDHESRSSLSSV*DSYSEAMPDSR
Trigger: CCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGGGATCCGCAGGTCGTaGCCATCGTCCACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HPGRRPVPASAGHSAGAAGIRRS*PSSTRL
Trigger: CAACCTTGTGGACGATGGGCACGACCTGCGGATCCC...TGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGCACCTACACGGCGATCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCACAGCGGTGTCTCTGTaGCCAGGCCTGGAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: GTYTAISSSRPSPSSCLCTAVSL*PGLEAS
Trigger: CGAAGCCTCCAGGCCTGGGCACAGAGACACCGCTGT...GCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGATCGCCGTGTAGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCACCCAGTTCCTGCCTCTaGAGGACATTCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: HPGRRPVPASAGHSAGAAPSSCL*RTFSRR
Trigger: GCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGG...TGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp GGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGCCTGCTGTTGGGCCTTaGCACGTCCAGGCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: GTTSRAPRSRPCWTRTPRPAVGP*HVQASY
Trigger: GTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGG...CCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGACCGTATCCGGCGCATaGCAGCCACGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: SPSSRAYLRGCPQGGQSQTVSGA*QPRSPP
Trigger: GGGTGGAGATCGTGGCTGCCATGCGCCGGATACGGT...CTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTGGGGTAGGCCTCTGCAGTGGCCGTaGAGGCCCTCTCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SITVGASCARESAGTWGRPLQWP*RPSRLQ
Trigger: CTGGAGCCGAGAGGGCCTCCACGGCCACTGCAGAGG...CCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp CCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGCCAGGGGGTGCGAAACCTTaGAGCCTGTGTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSSRAYLRGCPQGGQSQPGGAKP*SLCESL
Trigger: GAGGCTCTCACACAGGCTCCAAGGTTTCGCACCCCC...TGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGTCCTGGGTCAGCATGGGCTCCTaGGGGTGCGAAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QSTGRAPERKVISSKLSWVSMGS*GCETLE
Trigger: CTCCAAGGTTTCGCACCCCCAGGAGCCCATGCTGAC...CCAGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCGAGTCTGCTGGCACCTaGGGTAGGCTGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSESAGT*GRLGQA
Trigger: TGCCTGCCCCAGCCTACCCCAGGTGCCAGCAGACTC...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCGCGGCCTGGGTCTCCTaGGCTGTTGCTGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSAAWVS*AVAVPL
Trigger: GAGAGGAACAGCAACAGCTCAGGAGACCCAGGCCGC...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCTTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTFCSKS*CTRAWA
Trigger: GGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAA...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGTTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLFCSKS*CTRAWA
Trigger: GGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAA...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCGGAATCAGATCTAAGTaGTTTGGAGCAGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLGIRSK*FGAADK
Trigger: CTTGTCTGCTGCTCCAAATCACTTAGATCTGATTCC...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GAGGCGATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCAAGGCGTCCTCGTTGTaGAAGGGGATCCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: EAMPDSRNLMSSRPPRSAKASSL*KGIRRS
Trigger: CGACCTGCGGATCCCCTTGCACAACGAGGACGCCTT...GGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGCACCTACACGGCGATCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCCCACGATCTCCACCCTaGTGTTGGGCCTTGGCACGT +
Preference number: 4 (lower is better)
Translates to: GTYTAISSSRPSPSSCLCPRSPP*CWALAR
Trigger: ACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGG...GCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGATCGCCGTGTAGGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGCCACAGACCTCAAAGGCCTaGCCCACCGTCCGAACGATT +
Preference number: 4 (lower is better)
Translates to: PSSRAYLRGCPQGGQSQPQTSKA*PTVRTI
Trigger: AATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTG...TGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGTTCTGCTGCGTGTGCTaGAGGCTCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTTSRAPRSRPCWTRTPRFCCVC*RLSLWQ
Trigger: CTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAA...CCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAACAGCGGTGTCTCTGTaGCCAGGCCTGGAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPTAVSL*PGLEAS
Trigger: CGAAGCCTCCAGGCCTGGGCACAGAGACACCGCTGT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGACTTGTGTCTGCTGCTaGTGCTGCTGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTTSRAPRSRPCWTRTPRTCVCC*CCWRSC
Trigger: GCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGT...CCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp TCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGGCCACTTGTGTCTGCTaGTGCTGCTGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSSRAYLRGCPQGGQSQATCVC*CCCWRS
Trigger: GCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGC...CTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGGCCACTTGTGTCTGCTaGTGCTGCTGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLATCVC*CCCWRS
Trigger: GCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGC...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCATTCAGTTCCAGCTCTTaGACCTGCTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPALGAGCPRAEESESTPFSSSS*TCLTSR
Trigger: CCTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAA...TGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCAGAGAGGTAAAGTGCTaGAAAAGCTTCAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISREVKC*KSFSWT
Trigger: TGTCCAGCTGAAGCTTTTGCAGCACTTTACCTCTCT...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCATCTCCACCCTGCTGTTaGGCCTTGGCACGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRASPPCC*ALARPG
Trigger: GCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGA...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCAACCGTATCCGGCGCATaGCAGCCACGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRATVSGA*QPRSPP
Trigger: GGGTGGAGATCGTGGCTGCCATGCGCCGGATACGGT...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTTCGGCTCCAGTGAGCTaGCGGCCTGGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLSAPVS*RPGSPE
Trigger: CTCAGGAGACCCAGGCCGCCAGCTCACTGGAGCCGA...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp TCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCCAGTCTCCTCTGCAGTaGCCGTGGAGGCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SHHPGRRPVPASAGHSAGQSPLQ*PWRPSR
Trigger: CCGAGAGGGCCTCCACGGCCACTGCAGAGGAGACTG...GCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGGTCAGCATGGGCTCCTaGGGGTGCGAAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLVSMGS*GCETLE
Trigger: CTCCAAGGTTTCGCACCCCCAGGAGCCCATGCTGAC...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTGGCAGCGGGCTGAGCTaGTGCGGGCGACGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVGSGLS*CGRRER
Trigger: CCGCTCGCGTCGCCCGCATCAGCTCAGCCCGCTGCC...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCCGAGCGGCAGCGGGCTaGGCTGATGCGGGCGACGCG +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGRAAAG*ADAGDA
Trigger: CGCGTCGCCCGCATCAGCTCAGCCCGCTGCCGCTCG...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAACCCTCTCGGCTCCAGTaGGCTGGCGGCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQPSRLQ*AGGLGL
Trigger: GAGACCCAGGCCGCCAGCTCACTGGAGCCGAGAGGG...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGACCTTGGAGCCTGTGTaGGAGCCTCCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLTLEPV*EPPSFP
Trigger: AGGGAAGGAAGGAGGCTCTCACACAGGCTCCAAGGT...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTGAGCAGCATCCTGGGTaGGGCTGTCAGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLEQHPG*GCQHGL
Trigger: GAGCCCATGCTGACAGCCTCACCCAGGATGCTGCTC...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp GAGGCGATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCCTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAG +
Preference number: 4 (lower is better)
Translates to: EAMPDSRNLMSSRPPRSALRGDA*LSELDE
Trigger: CTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAG...GGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGAGAGAGACCCTCTCCTaGAGCCATGGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLRETLS*SHGLWK
Trigger: CTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCT...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCGGTCAGAGGTGTAGGTaGCAAACTATTACTTGTGAT +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISGQRCR*QTITCD
Trigger: ATCACAAGTAATAGTTTGTCACCTACACCTCTGACC...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp GAGGCGATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTGGCCTCAAAGCAGATaGCGTGCTGGAAGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: EAMPDSRNLMSSRPPRSAWPQSR*RAGRRP
Trigger: AGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCA...GGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCATCGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGTCCTGGCATTCTGCTGCGTGTaGTGCAGGCTCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: TEHGQGSGAEGDLQQAVLAFCCV*CRLSLW
Trigger: CCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGC...CAGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp ATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTGGCCATCTGCATTCTaGTGCGTGTGCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: MPDSRNLMSSRPPRSASPWPSAF*CVCCRL
Trigger: GAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCA...GGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp TGTCCTTGTTCTGCAGCAAAAGCTGATGCACGCGAGCCTGGGCCTCCAGCCGCGATGGGCTCCTGGGGGTaGGAAACCTTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CPCSAAKADAREPGPPAAMGSWG*ETLEPV
Trigger: CACAGGCTCCAAGGTTTCGCACCCCCAGGAGCCCAT...CGCGGCTGGAGGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAACAAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCCCCAGTTCCTGCCTCTaGAGGACATTCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSPSSCL*RTFSRR
Trigger: GCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGG...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GAGTCGCGCTCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGCGATGCCTAAGCAGATGCCGTGCTaGAAGGCGTCCTCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ESRSSLSSVLDSYSEAMPKQMPC*KASSLC
Trigger: GCACAACGAGGACGCCTTCCAGCACGGCATCTGCTT...AGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGCCTCTGCAGTGGCCGTaGAGGCCCTCTCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETPLQWP*RPSRLQ
Trigger: CTGGAGCCGAGAGGGCCTCCACGGCCACTGCAGAGG...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGCAGTCTCCTCTGCAGTaGCCGTGGAGGCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWQSPLQ*PWRPSR
Trigger: CCGAGAGGGCCTCCACGGCCACTGCAGAGGAGACTG...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp GTTCTGCAGCAAAAGCTGATGCACGCGAGCCTGGGCCTCCAGCCGCGCCGCAGCATCATTCCCTGGAAGTaGGACCTCCACCGCATCGAT +
Preference number: 4 (lower is better)
Translates to: VLQQKLMHASLGLQPRRSIIPWK*DLHRID
Trigger: ATCGATGCGGTGGAGGTCCCACTTCCAGGGAATGAT...GCTGCGGCGCGGCTGGAGGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCGGGGGTGCGAAACCTTaGAGCCTGTGTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSGGAKP*SLCESL
Trigger: GAGGCTCTCACACAGGCTCCAAGGTTTCGCACCCCC...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp ACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGTCCTGTCCAGCAAGCTGTCCTaGGAGCCCATGGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TEHGQGSGAEGDLQQAVLSSKLS*EPMAFC
Trigger: ACAGAACGCCATGGGCTCCCAGGACAGCTTGCTGGA...CAGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCACGAATGCAGGTCCTCTaGCTTAGGGGTCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPRMQVL*LRGRGV
Trigger: GACCCCACGACCCCTAAGCCAGAGGACCTGCATTCG...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCGATGGCTTCCCTTCCTaGTCGGGACCATGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSDGFPS*SGPWRR
Trigger: CCGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATC...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAAGGCAGCGGGCTGAGCTaGTGCGGGCGACGCGAGCGG +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKGSGLS*CGRRER
Trigger: CCGCTCGCGTCGCCCGCATCAGCTCAGCCCGCTGCC...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGCCCTCTCGGCTCCAGTaGGCTGGCGGCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLPSRLQ*AGGLGL
Trigger: GAGACCCAGGCCGCCAGCTCACTGGAGCCGAGAGGG...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTCTCCGGAGCGGAAGGTaGTCTCCAGCAAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLLRSGR*SPASCP
Trigger: AGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAG...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAAGGGTCGGTGGCTGGTaGTCCTTCAAGGCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPRVGGW*SFKAPR
Trigger: TCTAGGAGCCTTGAAGGATCACCAGCCACCGACCCT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp GTTCTGCAGCAAAAGCTGATGCACGCGAGCCTGGGCCTCCAGCCGCGCCGCAGCGCATCACCAGCATCTTaGTCTCATCCCACGTCCATT +
Preference number: 4 (lower is better)
Translates to: VLQQKLMHASLGLQPRRSASPAS*SHPTSI
Trigger: AATGGACGTGGGATGAGAGCAAGATGCTGGTGATGC...GCTGCGGCGCGGCTGGAGGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGGTCACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGATCTTCCTGGCCATCTaGATTCTGCTGCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GSQSTGRAPERKVISSKLIFLAI*ILLRVL
Trigger: CAGCACACGCAGCAGAATGCAGATGGCCAGGAAGAT...CAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCTCCAGCTCTTGCACCTaGTTGACCAGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTSSSCT*LTSREM
Trigger: CATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCTGGA...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGCCCAGCGGCGGCGAATaGAGGTCCTCTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETPSGGE*RSSGLG
Trigger: CCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGG...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp AGCAAGCTGTCCTGGGAGCCCATGGCGTTCTGTCCTGACAGCTTCAGTTCCAGCGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SKLSWEPMAFCPDSFSSSAYLRG*PQGGQS
Trigger: ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGC...GCTGGAACTGAAGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACAGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCCGGCCCCAGAGCAGTaGAACGCACCGCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFPAPEQ*NAPPGT
Trigger: CGTCCCGGGCGGTGCGTTCCACTGCTCTGGGGCCGG...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp TATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGCCGGCCCCAGAGCAGTaGAACGCACCGCCCGGGACG +
Preference number: 4 (lower is better)
Translates to: YPETKYLRRYRWLPFLVGPAPEQ*NAPPGT
Trigger: CGTCCCGGGCGGTGCGTTCCACTGCTCTGGGGCCGG...CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGGCTTCCTACGTACTTaGCCTCAAAGCAGATGCCGT +
Preference number: 4 (lower is better)
Translates to: HPGRRPVPASAGHSAGAAGFLRT*PQSRCR
Trigger: ACGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCC...TGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGCGATGCCTGACTCTCGGCAGGACATCATTCCCTaGAAGTGGGACCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: SSLSSVLDSYSEAMPDSRQDIIP*KWDLHR
Trigger: GCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTG...CCGAGAGTCAGGCATCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTCGCGGCAGCTCCTCCTaGGACCACGAGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVRGSSS*DHESRS
Trigger: GGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCG...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACCGCGGCAGCTCCTCCTaGGACCACGAGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNRGSSS*DHESRS
Trigger: GGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCG...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCCTGAGAAGGTACCGATaGCTTCCCTTCCTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLLRRYR*LPFLVG
Trigger: CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAG...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCCATTCAATGTCCGGCTaGAGAAAATGTTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISHSMSG*RKCLDS
Trigger: TGAATCCAAACATTTTCTCCAGCCGGACATTGAATG...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTACCACCACTGCCCAGTaGAGGGGACAGGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLTTTAQ*RGQVER
Trigger: CCTCTCAACCTGTCCCCTCCACTGGGCAGTGGTGGT...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCGCTCATTTAGTTTCATaGATCTCACTTTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISAHLVS*ISLSWF
Trigger: GAACCAGGAAAGTGAGATCCATGAAACTAAATGAGC...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCCTGATGGAGGGTCGGTaGCTGGTGATCCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLLMEGR*LVILQG
Trigger: GCCTTGAAGGATCACCAGCCACCGACCCTCCATCAG...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTCTGGAAGCTTCGGGATaGGGGCTGCTCACAGGACAG +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLLEASG*GLLTGQ
Trigger: CTGTCCTGTGAGCAGCCCCCATCCCGAAGCTTCCAG...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCACACTTGTGGATACCGTaGCTGCCTCCCTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPHLWIP*LPPSCP
Trigger: TGGGCAAGAGGGAGGCAGCCACGGTATCCACAAGTG...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCGAGCGGCAGCGGGCTaGGCTGATGCGGGCGACGCG +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHRAAAG*ADAGDA
Trigger: CGCGTCGCCCGCATCAGCTCAGCCCGCTGCCGCTCG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTAGAGAGACCCTCTCCTaGAGCCATGGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLRETLS*SHGLWK
Trigger: CTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCT...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCCCAGCCCAGAAGGGCTaGGGTGAACAATTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSPAQKG*GEQFVA
Trigger: TGCCACAAATTGTTCACCTCAGCCCTTCTGGGCTGG...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCGGCGGCGGAGCAGGGTaGCTGTCACGGAGACGCTGG +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGGGGAG*LSRRRW
Trigger: CCAGCGTCTCCGTGACAGGCACCCTGCTCCGCCGCC...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp GAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGTCAAAGCAGATGCCGTaGTGGAAGGCGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: ESTPASPSSRAYLRGCPQSKQMP*WKASSL
Trigger: CAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGA...CTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CGGCGATCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCACCATCTGCATTCTGCTaGGTGTGCTGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RRSHHPGRRPVPASAGHSPSAFC*VCCRLS
Trigger: GCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGG...TGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGATCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGCAATGTTCCCTTTCCTaGCCAGTTGGCCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLQCSLS*PVGPDG
Trigger: TCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTG...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTGGGGTAGGCTCTGTGCCCAGGCCTaGAGGCTTCGAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SITVGASCARESAGTWGRLCAQA*RLRGRR
Trigger: TCTTCTTCCTCGAAGCCTCCAGGCCTGGGCACAGAG...CCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp CGGCGATCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCATCTGGTGGTGAGTaGACAGCGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: RRSHHPGRRPVPASAGHSASGGE*TAVSLC
Trigger: GCACAGAGACACCGCTGTCCACTCACCACCAGATGC...TGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGATCGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTTGTCCTGGGAGCCCATaGCGTTCTGTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLCPGSP*RSVLTA
Trigger: AGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACA...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTCTCCCGGGCCCTGGCTaGCATTCTCCTCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVLPGPG*HSPRQC
Trigger: GCACTGCCGAGGAGAATGCCAGCCAGGGCCCGGGAG...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGCTCCCGGGCCCTGGCTaGCATTCTCCTCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMLPGPG*HSPRQC
Trigger: GCACTGCCGAGGAGAATGCCAGCCAGGGCCCGGGAG...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCACAAGGGCAGGAGTCTTaGATGGGTCCCAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPQGQES*MGPKVS
Trigger: GCTGACTTTGGGACCCATCCAAGACTCCTGCCCTTG...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GGGTCACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGTTCAGCAAGTGTACCTaGACTCCAGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: GSQSTGRAPERKVISSKLFSKCT*TPAPPS
Trigger: TGATGGAGGAGCTGGAGTCCAGGTACACTTGCTGAA...CAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGAGGGTGGTGCACGTTaGGAGGGCATGGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPISTHQVCAGLGPLGREGGAR*EGMGAL
Trigger: CAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCAGTGAAATACATGTTTaGTCTTCATCCCTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TRAAARHGPSSHAAASISSEIHV*SSSLFP
Trigger: AGGAAACAGGGATGAAGACCAAACATGTATTTCACT...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCCCTCCAGGGAGGGCCTaGACTGGGGAAAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLPPGRA*TGERVA
Trigger: CGCCACCCTTTCCCCAGTTCAGGCCCTCCCTGGAGG...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTGGTCGCGCAATTCCTaGCGGCTAGGAGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADWSRNS*RLGGRQ
Trigger: CTGCCGCCCTCCTAGCCGGCAGGAATTGCGCGACCA...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGTGGTCGCGCAATTCCTaGCGGCTAGGAGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLWSRNS*RLGGRQ
Trigger: CTGCCGCCCTCCTAGCCGGCAGGAATTGCGCGACCA...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGGGATCCGCAGGTCGTaGCCATCGTCCACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRGIRRS*PSSTRL
Trigger: CAACCTTGTGGACGATGGGCACGACCTGCGGATCCC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGACAGCCACTTGTGTCTaGTGCTGCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWTATCV*CCCCWR
Trigger: CCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGT...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAACCAGCAGGGAGATGTaGTGGAGCATGTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPTSREM*WSMSLF
Trigger: GAACAAGGACATGCTCCAGCACATCTCCCTGCTGGT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp TCTCATCATCCAGGCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCTCCAGCTCTTGCACCTaGTTGACCAGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: SHHPGRRPVPASAGHSAGSSSCT*LTSREM
Trigger: CATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCTGGA...GCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGCCTGGATGATGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCATTCAGTTCCAGCTCTTaGACCTGCTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPFSSSS*TCLTSR
Trigger: CCTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAA...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp AGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTCCCAGCGGCGGCGAATaGAGGTCCTCTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SLAFAVQSTQSLQSQQGPPSGGE*RSSGLG
Trigger: CCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGG...AGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTAGAACCAGAGCAATTTaGCCCACCACACACTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGCPRAEESESTPASPSSRTRAI*PTTHWA
Trigger: GGCCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCT...ACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCTGGGTTCACTGGCACTaGGAAGCTGTGTGTCCTAAG +
Preference number: 4 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLWVHWH*EAVCPK
Trigger: CTTAGGACACACAGCTTCGCAGTGCCAGTGAACCCA...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAATCATTCCCTGGAAGTaGGACCTCCACCGCATCGAT +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPIIPWK*DLHRID
Trigger: ATCGATGCGGTGGAGGTCCCACTTCCAGGGAATGAT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp GGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACC +
Preference number: 4 (lower is better)
Translates to: GVSSGGRKRKHSSFTKQSASAAN*SFSKCT
Trigger: GGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGC...CGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAAGCAGGGAGATGTGCTaGAGCATGTCCTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPSREMC*SMSLFC
Trigger: GCAGAACAAGGACATGCTCCAGCACATCTCCCTGCT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLGLPAG*AKSAKP
Trigger: GGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCCTCCCGGGCCCTGGCTaGCATTCTCCTCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGLPGPG*HSPRQC
Trigger: GCACTGCCGAGGAGAATGCCAGCCAGGGCCCGGGAG...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCTGGTTTGGGTCCACTaGGGAGGATACCAATACACA +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTLVWVH*GGYQYT
Trigger: TGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAG...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GACAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGCAAAAGGACTGGGTGTaGGGAGCTGCCGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: DRVTSSGNQVCNVPFPAQQKDWV*GAAGQL
Trigger: CAGCTGCCCGGCAGCTCCCCACACCCAGTCCTTTTG...CTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp TGCTTGACCAGCAGGGAGATGTGCTGGAGCATGTCCTTGTTCTGCAGCAAAAGCGAGCAGCATCCTGGGTaGGGCTGTCAGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLTSREMCWSMSLFCSKSEQHPG*GCQHGL
Trigger: GAGCCCATGCTGACAGCCTCACCCAGGATGCTGCTC...GCTTTTGCTGCAGAACAAGGACATGCTCCAGCACATCTCCCTGCTGGTCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR GCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLAAYLRG*PQGGQS
Trigger: ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGC...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATGCCTACCTAAGGGGCTaGCCGCAGGGTGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADAYLRG*PQGGQS
Trigger: ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGC...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAAGAAAAGGCGACGGTaGCGGTGGCGGTGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVKKRRR*RWRWRW
Trigger: CCACCGCCACCGCCACCGCCACCGTCGCCTTTTCTT...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGAGGGGAGACTGGAGCTaGGCGCGGCGACGCGTGGCG +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRRGDWS*ARRRVA
Trigger: CGCCACGCGTCGCCGCGCCCAGCTCCAGTCTCCCCT...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp GACAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGCCTGCTGTTGGGCCTTaGCACGTCCAGGCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: DRVTSSGNQVCNVPFPAQPAVGP*HVQASY
Trigger: GTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGG...CTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAAGAAGATCCTGTAGATaGGGTCCTGCATCACCAGCA +
Preference number: 4 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPRRSCR*GPASPA
Trigger: TGCTGGTGATGCAGGACCCCATCTACAGGATCTTCT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp GACAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGGTCAGCATGGGCTCCTaGGGGTGCGAAACCTTGGAG +
Preference number: 4 (lower is better)
Translates to: DRVTSSGNQVCNVPFPAQVSMGS*GCETLE
Trigger: CTCCAAGGTTTCGCACCCCCAGGAGCCCATGCTGAC...CTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp AGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGTGTCCTGGGAGCCCATaGCGTTCTGTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: RKRKHSSFTKQSRLPKGLCPGSP*RSVLTA
Trigger: AGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACA...CAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQGLPAG*AKSAKP
Trigger: GGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCC...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCGCGGCAGCTCCTCCTaGGACCACGAGTCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHRGSSS*DHESRS
Trigger: GGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGCTGAGAAGGTACCGATaGCTTCCCTTCCTGGTCGGG +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETLRRYR*LPFLVG
Trigger: CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAG...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGATCTCAGCAAGGGCCTaGAGAAGGAATTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLISARA*RRNSSH
Trigger: ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCATCTCAGCAAGGGCCTaGAGAAGGAATTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTISARA*RRNSSH
Trigger: ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACAAGCTGTCCTCCCCCTaGGCTCTCACACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNKLSSP*ALTPRA
Trigger: GGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATAAGCTGTCCTCCCCCTaGGCTCTCACACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADKLSSP*ALTPRA
Trigger: GGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTT...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCGCGGCCTGGGTCTCCTaGGCTGTTGCTGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLAAWVS*AVAVPL
Trigger: GAGAGGAACAGCAACAGCTCAGGAGACCCAGGCCGC...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACCTCCGGAGCGGAAGGTaGTCTCCAGCAAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNLRSGR*SPASCP
Trigger: AGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAG...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCACAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRAQKQST*EGTDGF
Trigger: GAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTG...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCACTCACACCAAGGGCCTaGACCATGTTAAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRALTPRA*TMLKLQ
Trigger: TTGAAGCTTTAACATGGTTCAGGCCCTTGGTGTGAG...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CTGGGGCAGGCACCAATAAGGTTAGCACCCCTGGTGTCCATTTGTCCTCCATATAGGACACAGGGGAGGTaGGGGGCAATTCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGQAPIRLAPLVSICPPYRTQGR*GAIPSF
Trigger: GAAGCTGGGAATTGCCCCTCACCTCCCCTGTGTCCT...ATATGGAGGACAAATGGACACCAGGGGTGCTAACCTTATTGGTGCCTGCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTCTGCCCAGTTGGCCCTaGTGGAGGGTCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPLPSWP*WRVGGW
Trigger: CCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAG...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGGGAGGGAGGACAGGGTaGCATCGTCGGGAAATCAGG +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLGGRTG*HRREIR
Trigger: CCTGATTTCCCGACGATGTCACCCTGTCCTCCCTCC...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCAAAAGTCTTGTGGGATTaGGCCCTCAAACTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRAKVLWD*ALKLWD
Trigger: ATCCCACAGTTTGAGGGCTCAATCCCACAAGACTTT...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCGGGATCCGCAGGTCGTaGCCATCGTCCACAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSGIRRS*PSSTRL
Trigger: CAACCTTGTGGACGATGGGCACGACCTGCGGATCCC...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCACCCAGTTCCTGCCTCTaGAGGACATTCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVAPSSCL*RTFSRR
Trigger: GCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGG...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGCATTCTCCTCGGCAGTaGACATTCACTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETHSPRQ*TFTGHP
Trigger: GGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATG...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCATGTGGGAGCCTCCTGTaGACGAGAGTCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLACGSLL*TRVCWH
Trigger: GTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACA...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp GGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGAGAAGATCCTGTAGATaGGGTCCTGCATCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GVSSGGRKRKHSSFTKQSRRSCR*GPASPA
Trigger: TGCTGGTGATGCAGGACCCCATCTACAGGATCTTCT...CGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CGCCCTGCGCTGGGGGCGGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAACGATTCTCATAGCTTaGCTCTTCTTCTTGGATTTA +
Preference number: 4 (lower is better)
Translates to: RPALGAGCPRAEESESTPTILIA*LFFLDL
Trigger: TAAATCCAAGAAGAAGAGCCAAGCTATGAGAATCGT...TGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCCGCCCCCAGCGCAGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAACAGTCTCCTCTGCAGTaGCCGTGGAGGCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQQSPLQ*PWRPSR
Trigger: CCGAGAGGGCCTCCACGGCCACTGCAGAGGAGACTG...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGGGGGTGCGAAACCTTaGAGCCTGTGTGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDGGAKP*SLCESL
Trigger: GAGGCTCTCACACAGGCTCCAAGGTTTCGCACCCCC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp AGCAAGCTGTCCTGGGAGCCCATGGCGTTCTGTCCTGACAGCTTCAGTTCCAGCAGCAGGGAGATGTGCTaGAGCATGTCCTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SKLSWEPMAFCPDSFSSSSREMC*SMSLFC
Trigger: GCAGAACAAGGACATGCTCCAGCACATCTCCCTGCT...GCTGGAACTGAAGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACAGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp TGCTTGACCAGCAGGGAGATGTGCTGGAGCATGTCCTTGTTCTGCAGCAAAAGCCGAATGCAGGTCCTCTaGCTTAGGGGTCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CLTSREMCWSMSLFCSKSRMQVL*LRGRGV
Trigger: GACCCCACGACCCCTAAGCCAGAGGACCTGCATTCG...GCTTTTGCTGCAGAACAAGGACATGCTCCAGCACATCTCCCTGCTGGTCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAGGGCTGCCCGCAGGGTaGGCAAAGTCAGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLGLPAG*AKSAKP
Trigger: GGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCC...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGCGCTCTCGTCCGTGTTaGACTCGTACTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLRSRPC*TRTPRR
Trigger: TCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCG...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATCGCTCTCGTCCGTGTTaGACTCGTACTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADRSRPC*TRTPRR
Trigger: TCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCG...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLAVHIH*ASPTRA
Trigger: TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGC...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp AGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGATGGCTTCCCTTCCTaGTCGGGACCATGGAGACGG +
Preference number: 4 (lower is better)
Translates to: SLAFAVQSTQSLQSQQGPDGFPS*SGPWRR
Trigger: CCGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATC...AGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCAAGCTGTCCTCCCCCTaGGCTCTCACACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLKLSSP*ALTPRA
Trigger: GGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTT...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGTGCAAAAGCTTCAGCTaGACAGGACACAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWCKSFS*TGHRGG
Trigger: ACCTCCCCTGTGTCCTGTCCAGCTGAAGCTTTTGCA...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACACCACCACTGCCCAGTaGAGGGGACAGGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNTTTAQ*RGQVER
Trigger: CCTCTCAACCTGTCCCCTCCACTGGGCAGTGGTGGT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCGGCCAAGGGTGGCAATaGCTGTGGTCCCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSGQGWQ*LWSLTQ
Trigger: TTGGGTCAGGGACCACAGCCATTGCCACCCTTGGCC...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAACGCACGCAGAGAGATaGGCCAAGGGTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVATHAER*AKGGNG
Trigger: GCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGT...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACACGCACGCAGAGAGATaGGCCAAGGGTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDTHAER*AKGGNG
Trigger: GCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGT...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGCTATTTCTGATTGAGTaGAGCCACAGGGGCATAATG +
Preference number: 4 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLLFLIE*SHRGIM
Trigger: CATTATGCCCCTGTGGCTCCACTCAATCAGAAATAG...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACTGGGGGCAGGAGAGGTaGGACGAGGATGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDWGQER*DEDAGR
Trigger: TCTTCCTGCATCCTCGTCCCACCTCTCCTGCCCCCA...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
3UTR CAA 72 bp GGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTaGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: GNQVCNVPFPAQ*ALMEGRWLVIL
Trigger: AAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp GTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTCTCGAGCGATATAGCTaGAGATCTTCAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VLGRKKAKALQLHQAVAPLERYS*RSSSLG
Trigger: CCCAAGACTTGAAGATCTTCAGCTATATCGCTCGAG...AGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCTTCTGCAGCAAAAGCTaGTGCACGCGAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLFCSKS*CTRAWA
Trigger: GGCCCAGGCTCGCGTGCATCAGCTTTTGCTGCAGAA...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCCGGAGCGGAAGGTaGTCTCCAGCAAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFLRSGR*SPASCP
Trigger: AGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAG...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCACTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAG +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVALRGDA*LSELDE
Trigger: CTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAG...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTAGAGAGACCCTCTCCTaGAGCCATGGGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVRETLS*SHGLWK
Trigger: CTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCT...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TCCATAACTGTGGGAGCCTCCTGTGCACGAGAGTCTGCTGGCACCTGGGGTAGGCATATCCTTGCCGATTaGCCCTCCAATAACACTGCA +
Preference number: 4 (lower is better)
Translates to: SITVGASCARESAGTWGRHILAD*PSNNTA
Trigger: TGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATG...CCTACCCCAGGTGCCAGCAGACTCTCGTGCACAGGAGGCTCCCACAGTTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGGAGGGAGGACAGGGTaGCATCGTCGGGAAATCAGG +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLGGRTG*HRREIR
Trigger: CCTGATTTCCCGACGATGTCACCCTGTCCTCCCTCC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCCTTGTGATTGGTGTCTaGAATGGGGGAAAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSLVIGV*NGGKSC
Trigger: ACAAGACTTTCCCCCATTTCAGACACCAATCACAAG...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCGTCAAAAGCATTAGCTaGTTCCCTTGCTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTVKSIS*FPCSEN
Trigger: GTTTTCTGAGCAAGGGAATCAGCTAATGCTTTTGAC...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACCAGACCTCAAAGGCCTaGCCCACCGTCCGAACGATT +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNQTSKA*PTVRTI
Trigger: AATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTG...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCATTCTGCTGCGTGTGCTaGAGGCTCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLAFCCVC*RLSLWQ
Trigger: CTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAA...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGCCATCTGCATTCTGCTaGGTGTGCTGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMPSAFC*VCCRLS
Trigger: GCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGG...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGTGGCCATCTGCATTCTaGTGCGTGTGCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLWPSAF*CVCCRL
Trigger: GAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCA...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GACAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGGGTCTCCTGAGCTGTTaGTGTTCCTCTCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DRVTSSGNQVCNVPFPAQGLLSC*CSSRSL
Trigger: GAGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACC...CTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCTGTGTCTGCTGCTGCTaGTGCTGGAGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLCVCCC*CWRSCW
Trigger: CCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACA...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACACTTGTGTCTGCTGCTaGTGCTGCTGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNTCVCC*CCWRSC
Trigger: GCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGTTCAGTTCCAGCTCTTaGACCTGCTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETFSSSS*TCLTSR
Trigger: CCTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAA...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCACACTTTTTATATGTGTaGTCAAGGCACGCACGCAGA +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRAHFLYV*SRHARR
Trigger: TCTGCGTGCGTGCCTTGAGCACACATATAAAAAGTG...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGGAGGTGGGACGAGGATaGAGGAAGATGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLEVGRG*RKMDGE
Trigger: CTCCCCATCCATCTTCCTGCATCCTCGTCCCACCTC...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp AGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTAAGCAGATGCCGTGCTaGAAGGCGTCCTCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: SLAFAVQSTQSLQSQQGPKQMPC*KASSLC
Trigger: GCACAACGAGGACGCCTTCCAGCACGGCATCTGCTT...AGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGAGAAGATCCTGTAGATaGGGTCCTGCATCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWRRSCR*GPASPA
Trigger: TGCTGGTGATGCAGGACCCCATCTACAGGATCTTCT...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGTCGGCTCCAGTGAGCTaGCGGCCTGGGTCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGSAPVS*RPGSPE
Trigger: CTCAGGAGACCCAGGCCGCCAGCTCACTGGAGCCGA...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CTGGGGCAGGCACCAATAAGGTTAGCACCCCTGGTGTCCATTTGTCCTCCATATCAGGACATCATTCCCTaGAAGTGGGACCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: LGQAPIRLAPLVSICPPYQDIIP*KWDLHR
Trigger: GCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTG...ATATGGAGGACAAATGGACACCAGGGGTGCTAACCTTATTGGTGCCTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACGCATCTGGTGGTGAGTaGACAGCGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNASGGE*TAVSLC
Trigger: GCACAGAGACACCGCTGTCCACTCACCACCAGATGC...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGAGCAGGGAGATGTGCTaGAGCATGTCCTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETSREMC*SMSLFC
Trigger: GCAGAACAAGGACATGCTCCAGCACATCTCCCTGCT...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCCAGCAAGCTGTCCTaGGAGCCCATGGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNSSKLS*EPMAFC
Trigger: ACAGAACGCCATGGGCTCCCAGGACAGCTTGCTGGA...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCATCCAGCAAGCTGTCCTaGGAGCCCATGGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLASSKLS*EPMAFC
Trigger: ACAGAACGCCATGGGCTCCCAGGACAGCTTGCTGGA...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLAVHIH*ASPTRA
Trigger: TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCGCAGTGCACATTCACTaGGCATCCCCTACCCGGGCA +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFAVHIH*ASPTRA
Trigger: TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGC...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCACCACCACTGCCCAGTaGAGGGGACAGGTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFTTTAQ*RGQVER
Trigger: CCTCTCAACCTGTCCCCTCCACTGGGCAGTGGTGGT...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCGGGTGGCAATGGCTGTaGTCCCTGACCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGGWQWL*SLTQVA
Trigger: TGCCACTTGGGTCAGGGACCACAGCCATTGCCACCC...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCCAAGAAAACCAACTGTaGCCATTAGAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLQENQL*PLEEDC
Trigger: GCAGTCCTCTTCTAATGGCCACAGTTGGTTTTCTTG...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCCTGATTCAAACACCCTaGAGATCCTCGTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLLIQTP*RSSFFS
Trigger: GGAAAAGAACGAGGATCTCCAGGGTGTTTGAATCAG...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCGGACTCAGGGAACCCTaGGTTAGATTTCATAAGCTA +
Preference number: 4 (lower is better)
Translates to: CSRHARREMGQGWQWLWSGLREP*VRFHKL
Trigger: TAGCTTATGAAATCTAACCCAGGGTTCCCTGAGTCC...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCACTGATGGAGGGTCGGTaGCTGGTGATCCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVALMEGR*LVILQG
Trigger: GCCTTGAAGGATCACCAGCCACCGACCCTCCATCAG...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCGGGCAGATTGGTGTCTGAAATaGGGGAAAGTCTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: WLAFSSAVHIHWASPTRADWCLK*GKVLWD
Trigger: ATCCCACAAGACTTTCCCCCATTTCAGACACCAATC...TGCCCGGGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCATCTATTGACCCACTaGCTAAGAACAGTGTCACAA +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTHLLTH*LRTVSQ
Trigger: TTGTGACACTGTTCTTAGCCAGTGGGTCAATAGATG...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCAGAGTCACTGGCAGATaGCCGGGACCAGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGRVTGR*PGPEMP
Trigger: GGGCATCTCTGGTCCCGGCCATCTGCCAGTGACTCT...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGCACATGAGAGTCACTaGCAGATGGCCGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDAHESH*QMAGTR
Trigger: TCTGGTCCCGGCCATCTGCCAGTGACTCTCATGTGC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCACCTTGGAGCCTGTGTaGGAGCCTCCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGTLEPV*EPPSFP
Trigger: AGGGAAGGAAGGAGGCTCTCACACAGGCTCCAAGGT...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCCACCCTTGGCCAAGTaGCTTGCTGGCCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHPPLAK*LAGPGC
Trigger: ACACCCTGGGCCAGCAAGTCACTTGGCCAAGGGTGG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTCCAGAAGGGCTGAGGTaGACAATTTGTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVPEGLR*TICGTL
Trigger: GAGGGTGCCACAAATTGTTCACCTCAGCCCTTCTGG...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACTCAAAGCAGATGCCGTaGTGGAAGGCGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDSKQMP*WKASSL
Trigger: CAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGA...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp TATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGCAGACCTCAAAGGCCTaGCCCACCGTCCGAACGATT +
Preference number: 4 (lower is better)
Translates to: YPETKYLRRYRWLPFLVGQTSKA*PTVRTI
Trigger: AATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTG...CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp TATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGGCATTCTGCTGCGTGTaGTGCAGGCTCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: YPETKYLRRYRWLPFLVGAFCCV*CRLSLW
Trigger: CCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGC...CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCATCTGCATTCTGCTaGGTGTGCTGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIPSAFC*VCCRLS
Trigger: GCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGG...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCCAGCTCTTGCACCTaGTTGACCAGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNSSSCT*LTSREM
Trigger: CATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCTGGA...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCAAAACTGACCACCACTaGCCAGTGGAGGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSKTDHH*PVEGTG
Trigger: ACCTGTCCCCTCCACTGGGCAGTGGTGGTCAGTTTT...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGGAGCTTTTCCTCATTaGCCCAGCCAGCCCGTTAAG +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMGAFPH*PSQPVK
Trigger: CTTAACGGGCTGGCTGGGGCAATGAGGAAAAGCTCC...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCTGTGGATACCGTGGCTaGCTCCCTCTTGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSCGYRG*LPLAQI
Trigger: AATCTGGGCAAGAGGGAGGCAGCCACGGTATCCACA...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGGGGAGTAAAGGGCAGTaGTACCTCACAGTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLGSKGQ*YLTVGH
Trigger: GTGGCCAACTGTGAGGTAGCACTGCCCTTTACTCCC...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGCACCTAGCATGGCATaGCATGTTGGAGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDAPSMA*HVGGGR
Trigger: CCTTCCACCTCCAACATGGCATGCCATGCTAGGTGC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTTGCAGGCTCAGCTTGTaGCAGACCTCAAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVCRLSL*QTSKAC
Trigger: GCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCA...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAAGGGAGCAGCATCCTaGGTGAGGCTGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVKGAAS*VRLSAW
Trigger: CCATGCTGACAGCCTCACCCAGGATGCTGCTCCCTT...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTGTGCCCAGGCCTaGAGGCTTCGAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFLCAQA*RLRGRR
Trigger: TCTTCTTCCTCGAAGCCTCCAGGCCTGGGCACAGAG...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTGCATCTGGTGGTGAGTaGACAGCGGTGTCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIASGGE*TAVSLC
Trigger: GCACAGAGACACCGCTGTCCACTCACCACCAGATGC...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp GACAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTCAGCAAGTGTACCTaGGCCACAGCCACTTGTGTC +
Preference number: 4 (lower is better)
Translates to: DRVTSSGNQVCNVPFPAQFSKCT*ATATCV
Trigger: GACACAAGTGGCTGTGGCCCAGGTACACTTGCTGAA...CTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCTGTCCTGGGAGCCCATaGCGTTCTGTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLCPGSP*RSVLTA
Trigger: AGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACA...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTTGTCCTGGGAGCCCATaGCGTTCTGTCCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGICPGSP*RSVLTA
Trigger: AGCTGTCAGGACAGAACGCCATGGGCTCCCAGGACA...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGAGCTGATTCACCTCTaGGAATCCGATTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRELIHL*ESDFFP
Trigger: GGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAATCACGGACAAAGCGTaGGAGCCTGACGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLAITDKA*EPDDAA
Trigger: TGCTGCATCGTCAGGCTCCCACGCTTTGTCCGTGAT...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGGGGCTCTGGTCCTCTaGGGCTTTCAGAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLAGALVL*GFQRGK
Trigger: TTTACCTCTCTGAAAGCCCCAGAGGACCAGAGCCCC...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTCAAGAAAACCAACTGTaGCCATTAGAAGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: LAVLERDPLLKPWALEGLQENQL*PLEEDC
Trigger: GCAGTCCTCTTCTAATGGCCACAGTTGGTTTTCTTG...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCCAAGGGCAGGAGTCTTaGATGGGTCCCAAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSQGQES*MGPKVS
Trigger: GCTGACTTTGGGACCCATCCAAGACTCCTGCCCTTG...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAAAAGTATGCGCTGGTTTaGGTCCACTGGGGAGGATAC +
Preference number: 4 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQKYALV*VHWGGY
Trigger: GTATCCTCCCCAGTGGACCCAAACCAGCGCATACTT...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGACACCAAGTATGCGCTaGTTTGGGTCCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMTPSMR*FGSTGE
Trigger: CTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGT...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGAGAGAATTACACTTGTaGATACCGTGGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETRELHL*IPWLPP
Trigger: GGGAGGCAGCCACGGTATCCACAAGTGTAATTCTCT...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTGGCCAAGTGACTTGCTaGCCCAGGGTGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SIVISRNKVPEKVPMASLGQVTC*PRVCPS
Trigger: GGAGGGGCACACCCTGGGCCAGCAAGTCACTTGGCC...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAACCTTCACGGGCAGCATaGGCATCTGGGCTTATCATT +
Preference number: 4 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQPSRAA*ASGLII
Trigger: AATGATAAGCCCAGATGCCCATGCTGCCCGTGAAGG...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGATCTCAATACTTTCCTaGAACCTCACACTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETISILS*NLTLSR
Trigger: CCGGGAGAGTGTGAGGTTTCAGGAAAGTATTGAGAT...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp TATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGCCTAAGGGAGGGCCATaGTGCATCACTAAGGTACCC +
Preference number: 4 (lower is better)
Translates to: YPETKYLRRYRWLPFLVGPKGGP*CITKVP
Trigger: GGGTACCTTAGTGATGCATCATGGCCCTCCCTTAGG...CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGAAGGCGTCCTCGTTGTaGAAGGGGATCCGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGKASSL*KGIRRS
Trigger: CGACCTGCGGATCCCCTTGCACAACGAGGACGCCTT...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCACGATCTCCACCCTaGTGTTGGGCCTTGGCACGT +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLPRSPP*CWALAR
Trigger: ACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGG...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAATTCTGCTGCGTGTGCTaGAGGCTCAGCTTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKFCCVC*RLSLWQ
Trigger: CTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAA...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAATCTTCCTGGCCATCTaGATTCTGCTGCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLAIFLAI*ILLRVL
Trigger: CAGCACACGCAGCAGAATGCAGATGGCCAGGAAGAT...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCGGTCTCCTGAGCTGTTaGTGTTCCTCTCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLGLLSC*CSSRSL
Trigger: GAGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACC...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATATGGGCTCCTGGGGGTaGGAAACCTTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHMGSWG*ETLEPV
Trigger: CACAGGCTCCAAGGTTTCGCACCCCCAGGAGCCCAT...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATTGTGTCTGCTGCTGCTaGTGCTGGAGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHCVCCC*CWRSCW
Trigger: CCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACA...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCTTCAGTTCCAGCTCTTaGACCTGCTTGACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSFSSSS*TCLTSR
Trigger: CCTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAA...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCGTCGCCCAGTTCCTaGCTCTGCAGGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLPSPSS*LCRTFS
Trigger: GCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGG...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTCATTCTCCTCGGCAGTaGACATTCACTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVHSPRQ*TFTGHP
Trigger: GGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATG...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCATTCTCCTCGGCAGTaGACATTCACTGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIHSPRQ*TFTGHP
Trigger: GGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATG...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTTCCACACACCAAGTATaGGCTGGTTTGGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVSTHQV*AGLGPL
Trigger: CAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGA...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACCAATGTTCCCTTTCCTaGCCAGTTGGCCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNQCSLS*PVGPDG
Trigger: TCCATCAGGGCCAACTGGGCAGGAAAGGGAACATTG...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGACGGTGCTCCATCCCTaGTTAGAGAACTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLTVLHP*LENSFS
Trigger: GCTGAAGGAGTTCTCTAAGCAGGGATGGAGCACCGT...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCAACAGAGTTAATGACACAACAGCTTTAGGAAGTAGAGTGCTAGTGGGTAGAACGCGAGCGGCGCTGTaGTCGCGCAATTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: SNRVNDTTALGSRVLVGRTRAAL*SRNSCR
Trigger: CCGGCAGGAATTGCGCGACCACAGCGCCGCTCGCGT...TCTACCCACTAGCACTCTACTTCCTAAAGCTGTTGTGTCATTAACTCTGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGCCTGCTGTTGGGCCTTaGCACGTCCAGGCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGPAVGP*HVQASY
Trigger: GTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGG...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAAAAGGGAGCAGCATCCTaGGTGAGGCTGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKKGAAS*VRLSAW
Trigger: CCATGCTGACAGCCTCACCCAGGATGCTGCTCCCTT...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTTCAGCAAGTGTACCTaGGCCACAGCCACTTGTGTC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNFSKCT*ATATCV
Trigger: GACACAAGTGGCTGTGGCCCAGGTACACTTGCTGAA...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGAGCAGGGAGATGTGCTaGAGCATGTCCTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLSREMC*SMSLFC
Trigger: GCAGAACAAGGACATGCTCCAGCACATCTCCCTGCT...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCGAATGCAGGTCCTCTaGCTTAGGGGTCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHRMQVL*LRGRGV
Trigger: GACCCCACGACCCCTAAGCCAGAGGACCTGCATTCG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGCGCTCTCGTCCGTGTTaGACTCGTACTCCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGRSRPC*TRTPRR
Trigger: TCGCCTCGGAGTACGAGTCCAACACGGACGAGAGCG...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGTCCTCCAGCAGCCTaGCAGTCCTGGAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRGPPAA*QSWRET
Trigger: GGTCTCTCTCCAGGACTGCCAGGCTGCTGGAGGACC...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCATCACGGACAAAGCGTaGGAGCCTGACGATGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFITDKA*EPDDAA
Trigger: TGCTGCATCGTCAGGCTCCCACGCTTTGTCCGTGAT...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAGATGGCTTCCCTTCCTaGTCGGGACCATGGAGACGG +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLDGFPS*SGPWRR
Trigger: CCGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATC...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTGCAAAAGCTTCAGCTaGACAGGACACAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNCKSFS*TGHRGG
Trigger: ACCTCCCCTGTGTCCTGTCCAGCTGAAGCTTTTGCA...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGCCAAGGGTGGCAATaGCTGTGGTCCCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGGQGWQ*LWSLTQ
Trigger: TTGGGTCAGGGACCACAGCCATTGCCACCCTTGGCC...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACGGAGATAAAACTCAGTaGGAGGAGACAGGGGCAACC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNGDKTQ*EETGAT
Trigger: GGTTGCCCCTGTCTCCTCCCACTGAGTTTTATCTCC...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCATGCCATGTTGGAGGTaGAAGGGGGCACTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSMPCWR*KGALSS
Trigger: AGAAGAGAGTGCCCCCTTCCACCTCCAACATGGCAT...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATAAGGAGTGGGTTCACTaGCACTGCGAAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADKEWVH*HCEAVC
Trigger: ACACACAGCTTCGCAGTGCCAGTGAACCCACTCCTT...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGGCAGCATGGGCATCTaGGCTTATCATTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMGSMGI*AYHSRG
Trigger: TCCTCTGGAATGATAAGCCCAGATGCCCATGCTGCC...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAG +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHLRGDA*LSELDE
Trigger: CTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCGACCCTATTTCTGATTaGGTGGAGCCACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFDPISD*VEPQGH
Trigger: ATGCCCCTGTGGCTCCACTCAATCAGAAATAGGGTC...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTTTGCTGACTGATTCATaGGAGGGCCTCCTCCAACCA +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVLLTDS*EGLLQP
Trigger: TGGTTGGAGGAGGCCCTCTCATGAATCAGTCAGCAA...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCGGACATGAATGCACATaGGAGTCACTGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGGHECT*ESLADG
Trigger: GCCATCTGCCAGTGACTCTCATGTGCATTCATGTCC...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATACTTGTGTCTGCTGCTaGTGCTGCTGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHTCVCC*CCWRSC
Trigger: GCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGT...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCACCAGCAGGGAGATGTaGTGGAGCATGTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLTSREM*WSMSLF
Trigger: GAACAAGGACATGCTCCAGCACATCTCCCTGCTGGT...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGCCCAGTTCCTGCCTCTaGAGGACATTCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRPSSCL*RTFSRR
Trigger: GCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGG...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGTTCAGAGAGGTAAAGTaGTGCAAAAGCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETFREVK*CKSFSW
Trigger: CCAGCTGAAGCTTTTGCAGCACTTTACCTCTCTGAA...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTGCAATGCATTCAGCATaGTTGAGGCCCAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIAMHSA*LRPSGV
Trigger: GACACCACTGGGCCTCAAGCATGCTGAATGCATTGC...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTAAGCAGATGCCGTGCTaGAAGGCGTCCTCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPKQMPC*KASSLC
Trigger: GCACAACGAGGACGCCTTCCAGCACGGCATCTGCTT...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATCAGGACATCATTCCCTaGAAGTGGGACCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHQDIIP*KWDLHR
Trigger: GCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTG...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACC +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQASAAN*SFSKCT
Trigger: GGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGC...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGAGCTGATTCACCTCTaGGAATCCGATTTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDELIHL*ESDFFP
Trigger: GGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCTACAAGGACTAGCCTaGCTTTTGCGGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGILQGLA*LLRSRA
Trigger: TGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAG...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTCTACAAGGACTAGCCTaGCTTTTGCGGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVLQGLA*LLRSRA
Trigger: TGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAG...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCAGCTTCCATTTAGATaGGCTGGGCTACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFQLPFR*AGLQAG
Trigger: TCCTGCCTGTAGCCCAGCCCATCTAAATGGAAGCTG...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTGAGATGGGCCAAGGGTaGCAATGGCTGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SIVISRNKVPEKVPMASLEMGQG*QWLWSL
Trigger: CAGGGACCACAGCCATTGCCACCCTTGGCCCATCTC...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCGACTTTTCACTCCTCTaGACGTTCAAAATCTTAATA +
Preference number: 4 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTDFSLL*TFKILI
Trigger: TATTAAGATTTTGAACGTCCAGAGGAGTGAAAAGTC...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTCACGTTGGGAGGGCATaGGAGCTCTGCCACCCTTCC +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASHVGRA*ELCHPS
Trigger: GGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTG...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp AAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTTGCCGATTGACGAGCAGCATCCTGGGTaGGGCTGTCAGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: KARVDELHFGIIISLPIDEQHPG*GCQHGL
Trigger: GAGCCCATGCTGACAGCCTCACCCAGGATGCTGCTC...GTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATCTCAATACTTTCCTaGAACCTCACACTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVAISILS*NLTLSR
Trigger: CCGGGAGAGTGTGAGGTTTCAGGAAAGTATTGAGAT...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACATCTCAATACTTTCCTaGAACCTCACACTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNISILS*NLTLSR
Trigger: CCGGGAGAGTGTGAGGTTTCAGGAAAGTATTGAGAT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCACAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLAQKQST*EGTDGF
Trigger: GAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTG...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCACTCACACCAAGGGCCTaGACCATGTTAAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLALTPRA*TMLKLQ
Trigger: TTGAAGCTTTAACATGGTTCAGGCCCTTGGTGTGAG...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTAGGGTCGGTGGCTGGTaGTCCTTCAAGGCTCCTAGA +
Preference number: 4 (lower is better)
Translates to: SIVISRNKVPEKVPMASLRVGGW*SFKAPR
Trigger: TCTAGGAGCCTTGAAGGATCACCAGCCACCGACCCT...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTCTGCCCAGTTGGCCCTaGTGGAGGGTCGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFLPSWP*WRVGGW
Trigger: CCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAG...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATCAAACTGTGGGATCTaGTGCTGTTTCCAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQSNCGI*CCFQVD
Trigger: ATCTACCTGGAAACAGCATCAGATCCCACAGTTTGA...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGGGTCAAACATTTGCTaGCTGATTCATGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLGSNIC*LIHERA
Trigger: GGCCCTCTCATGAATCAGTCAGCAAATGTTTGACCC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCGCATCACCAGCATCTTaGTCTCATCCCACGTCCATT +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLASPAS*SHPTSI
Trigger: AATGGACGTGGGATGAGAGCAAGATGCTGGTGATGC...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTACAGCCACTTGTGTCTaGTGCTGCTGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SIVISRNKVPEKVPMASLTATCV*CCCCWR
Trigger: CCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGT...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR GCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAACCAGCAGGGAGATGTaGTGGAGCATGTCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQTSREM*WSMSLF
Trigger: GAACAAGGACATGCTCCAGCACATCTCCCTGCTGGT...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGCAGAACTGCTTGCTTaGTTGGTGTGTGGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMAELLA*LVCGKK
Trigger: CTTTTTCCCACACACCAAGCAAGCAAGCAGTTCTGC...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACC +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGASAAN*SFSKCT
Trigger: GGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGC...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCATCTCAGCAAGGGCCTaGAGAAGGAATTCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSISARA*RRNSSH
Trigger: ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAATGCAAAAGCTTCAGCTaGACAGGACACAGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKCKSFS*TGHRGG
Trigger: ACCTCCCCTGTGTCCTGTCCAGCTGAAGCTTTTGCA...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTGGGTGGCAATGGCTGTaGTCCCTGACCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASGWQWL*SLTQVA
Trigger: TGCCACTTGGGTCAGGGACCACAGCCATTGCCACCC...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAAGGACTCAGGGAACCCTaGGTTAGATTTCATAAGCTA +
Preference number: 4 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQGLREP*VRFHKL
Trigger: TAGCTTATGAAATCTAACCCAGGGTTCCCTGAGTCC...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCCTGGTTTGGGTCCACTaGGGAGGATACCAATACACA +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLLVWVH*GGYQYT
Trigger: TGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAG...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATGCTTGCTTGGTGTGTaGGAAAAAGCCCCATACATT +
Preference number: 4 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQCLLGV*EKAPYI
Trigger: AATGTATGGGGCTTTTTCCCACACACCAAGCAAGCA...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCATGCTTGAGGCCCAGTaGTGTCAACAGCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGMLEAQ*CQQLCS
Trigger: AGAACAGAGCTGTTGACACCACTGGGCCTCAAGCAT...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCCTCGAGCGATATAGCTaGAGATCTTCAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLLERYS*RSSSLG
Trigger: CCCAAGACTTGAAGATCTTCAGCTATATCGCTCGAG...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATCAACTCGCAGCATCGTaGTATCCAGAAACAAAGTAC +
Preference number: 4 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADQLAAS*YPETKY
Trigger: GTACTTTGTTTCTGGATATCACGATGCTGCGAGTTG...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTGGAATCAGATCTAAGTaGTTTGGAGCAGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVGIRSK*FGAADK
Trigger: CTTGTCTGCTGCTCCAAATCACTTAGATCTGATTCC...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp AAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTTGCCGATTGACAGGACACAGGGGAGGTaGGGGGCAATTCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KARVDELHFGIIISLPIDRTQGR*GAIPSF
Trigger: GAAGCTGGGAATTGCCCCTCACCTCCCCTGTGTCCT...GTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCTTTTGCAGTAAAAACTaGCCACCACTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFFCSKN*PPLPSG
Trigger: TCCACTGGGCAGTGGTGGTCAGTTTTTACTGCAAAA...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp TATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGTTTTGCAGTAAAAACTaGCCACCACTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: YPETKYLRRYRWLPFLVGFCSKN*PPLPSG
Trigger: TCCACTGGGCAGTGGTGGTCAGTTTTTACTGCAAAA...CCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAAGCTCCCCAAACCCTTaGGATCTCCAGAGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLSSPNP*DLQSGK
Trigger: CTTACCACTCTGGAGATCTCAAGGGTTTGGGGAGCT...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCAAACATTTGCTGACTaGTTCATGAGAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLQTFAD*FMRGPP
Trigger: AGGAGGCCCTCTCATGAATCAGTCAGCAAATGTTTG...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTTGGCCATCTGCATTCTaGTGCGTGTGCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASWPSAF*CVCCRL
Trigger: GAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCA...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTCCCAGCGGCGGCGAATaGAGGTCCTCTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFPSGGE*RSSGLG
Trigger: CCCTAAGCCAGAGGACCTGCATTCGCCGCCGCTGGG...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp CGAACATATGACTCTAGCAGGTCTCAGCAATCTCTTCAGGCATTTGAAAATCTGCCGTCGCCCAGTTCCTaGCTCTGCAGGACATTCAGC +
Preference number: 4 (lower is better)
Translates to: RTYDSSRSQQSLQAFENLPSPSS*LCRTFS
Trigger: GCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGG...CAGATTTTCAAATGCCTGAAGAGATTGCTGAGACCTGCTAGAGTCATATGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAAGAGAGGTAAAGTGCTaGAAAAGCTTCAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVAREVKC*KSFSWT
Trigger: TGTCCAGCTGAAGCTTTTGCAGCACTTTACCTCTCT...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAGGCTTCCTACGTACTTaGCCTCAAAGCAGATGCCGT +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLGFLRT*PQSRCR
Trigger: ACGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCC...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp TCCAACAGAGTTAATGACACAACAGCTTTAGGAAGTAGAGTGCTAGTGGGTAGACGAATGCAGGTCCTCTaGCTTAGGGGTCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SNRVNDTTALGSRVLVGRRMQVL*LRGRGV
Trigger: GACCCCACGACCCCTAAGCCAGAGGACCTGCATTCG...TCTACCCACTAGCACTCTACTTCCTAAAGCTGTTGTGTCATTAACTCTGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGGCTCTGGTCCTCTaGGGCTTTCAGAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRGALVL*GFQRGK
Trigger: TTTACCTCTCTGAAAGCCCCAGAGGACCAGAGCCCC...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACGTTAACAGCCACTTATaGCCTTACAGGAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNVNSHL*PYRSKG
Trigger: TCCTTTGCTCCTGTAAGGCCATAAGTGGCTGTTAAC...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGCTGATTCAAACACCCTaGAGATCCTCGTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMLIQTP*RSSFFS
Trigger: GGAAAAGAACGAGGATCTCCAGGGTGTTTGAATCAG...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAAAGTATGCGCTGGTTTaGGTCCACTGGGGAGGATAC +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLKYALV*VHWGGY
Trigger: GTATCCTCCCCAGTGGACCCAAACCAGCGCATACTT...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGACTATTACTTGTGATTaGTGTCTGAAATGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWTITCD*CLKWGK
Trigger: TTTCCCCCATTTCAGACACCAATCACAAGTAATAGT...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGACATTTAGAGGTTCCTaGAGGGTGGTGCACGTTGGG +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGTFRGS*RVVHVG
Trigger: CCCAACGTGCACCACCCTCCAGGAACCTCTAAATGT...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACACCAGACCAGGACCCTaGTTTGAAGAAACTGAGTTA +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDTRPGP*FEETEL
Trigger: TAACTCAGTTTCTTCAAACCAGGGTCCTGGTCTGGT...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp AGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTTTAAGGCAGAGCAGTTaGCAGCAATGCATTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLAFAVQSTQSLQSQQGPLRQSS*QQCIQH
Trigger: ATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAA...AGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAGAGGTGAACAATTTGTaGCACCCTCATCAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LFICVLKARTQRDGPRVAEVNNL*HPHQFP
Trigger: TGGAAACTGATGAGGGTGCCACAAATTGTTCACCTC...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGAGGAGCCAAAAGGAGTaGGTTCACTGGCACTGCGAA +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGRSQKE*VHWHCE
Trigger: TTCGCAGTGCCAGTGAACCCACTCCTTTTGGCTCCT...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
3UTR CAA 72 bp AATTCCATGCTCACCCTACAAGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAATCTCTACAATCTCAGC +
Preference number: 4 (lower is better)
Translates to: NSMLTLQGLAWL*RSRALNLYNLS
Trigger: GCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAGGGTGAGCATGGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
3UTR CAA 72 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTaGGGTCCACTGGGGAGGATACCAATACACAAACTA +
Preference number: 4 (lower is better)
Translates to: LSPISTHQVCAG*GPLGRIPIHKL
Trigger: TAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACAAAGCTTATCCACTGTaGCACATTCCAATTCCATGC +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNKAYPL*HIPIPC
Trigger: GCATGGAATTGGAATGTGTCACAGTGGATAAGCTTT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGGAATCAGATCTAAGTaGTTTGGAGCAGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLGIRSK*FGAADK
Trigger: CTTGTCTGCTGCTCCAAATCACTTAGATCTGATTCC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAATTTTGCAGTAAAAACTaGCCACCACTGCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQFCSKN*PPLPSG
Trigger: TCCACTGGGCAGTGGTGGTCAGTTTTTACTGCAAAA...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCCTTTTCCCAGAGAGTTaGTCCAACAGAGTTAATGAC +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSLFPES*SNRVND
Trigger: GTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAG...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTACCACGATCTCCACCCTaGTGTTGGGCCTTGGCACGT +
Preference number: 4 (lower is better)
Translates to: LGWVPKSATQITSFSNSLPRSPP*CWALAR
Trigger: ACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGG...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp AAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTTGCCGATTGACGCATTCTGCTGCGTGTaGTGCAGGCTCAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KARVDELHFGIIISLPIDAFCCV*CRLSLW
Trigger: CCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGC...GTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTACAGCGGTGTCTCTGTaGCCAGGCCTGGAGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFTAVSL*PGLEAS
Trigger: CGAAGCCTCCAGGCCTGGGCACAGAGACACCGCTGT...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTTTCAGAGAGGTAAAGTaGTGCAAAAGCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIFREVK*CKSFSW
Trigger: CCAGCTGAAGCTTTTGCAGCACTTTACCTCTCTGAA...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCACTTTTTATATGTGTaGTCAAGGCACGCACGCAGA +
Preference number: 4 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGIHFLYV*SRHARR
Trigger: TCTGCGTGCGTGCCTTGAGCACACATATAAAAAGTG...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACATACAGTCCATCCAGTaGAGAGAAATTCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNIQSIQ*REILSW
Trigger: CCAGGAAAGAATTTCTCTGCACTGGATGGACTGTAT...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTCTCTGCAGAACTGCTTaGTTGCTTGGTGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPLCRTA*LLGVWE
Trigger: TTCCCACACACCAAGCAAGCAAGCAGTTCTGCAGAG...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTGGCCGGGACCAGAGATaGCCTCCACATTCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASGRDQR*PPHSVQ
Trigger: TTGAACTGAATGTGGAGGGCATCTCTGGTCCCGGCC...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTTTCAGCAAGTGTACCTaGAGAGAAGAGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SIVISRNKVPEKVPMASLFSKCT*REEAAA
Trigger: TGCCGCTGCCTCTTCTCTGCAGGTACACTTGCTGAA...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTACCGTATCCGGCGCATaGCAGCCACGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFTVSGA*QPRSPP
Trigger: GGGTGGAGATCGTGGCTGCCATGCGCCGGATACGGT...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp AAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTTGCCGATTGACTGCAGGCTCAGCTTGTaGCAGACCTCAAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KARVDELHFGIIISLPIDCRLSL*QTSKAC
Trigger: GCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCA...GTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGATCATTCCCTGGAAGTaGGACCTCCACCGCATCGAT +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRIIPWK*DLHRID
Trigger: ATCGATGCGGTGGAGGTCCCACTTCCAGGGAATGAT...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp AGCATCGTGATATCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCTACAAGGACTAGCCTaGCTTTTGCGGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SIVISRNKVPEKVPMASLLQGLA*LLRSRA
Trigger: TGCTCTGGACCGCAAAAGCCAGGCTAGTCCTTGTAG...AAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGATATCACGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CCCAGGCAGGAAGAAACCACCATGGAACACCCCAAGGGCAGGAGTCTTGGATGGACAGAACTGATATTTTaGTCAAGAAGTCAGACTCAT +
Preference number: 4 (lower is better)
Translates to: PRQEETTMEHPKGRSLGWTELIF*SRSQTH
Trigger: ATGAGTCTGACTTCTTGACCAAAATATCAGTTCTGT...CCATCCAAGACTCCTGCCCTTGGGGTGTTCCATGGTGGTTTCTTCCTGCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCATGCAGGAAGATGGATaGGGAGTCAAAAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLMQEDG*GVKSIS
Trigger: GCTAATGCTTTTGACTCCCCATCCATCTTCCTGCAT...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGACCAATGTAGCTTATaGGGAAAAGGGTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: ETKYLRRYRWLPFLVGTMDQCSL*GKGCSC
Trigger: ACAAGAACACCCTTTTCCCCATAAGCTACATTGGTC...CATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACTCGAGCGATATAGCTaGAGATCTTCAAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLLERYS*RSSSLG
Trigger: CCCAAGACTTGAAGATCTTCAGCTATATCGCTCGAG...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR TCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTACTCCGAGGCGATGCCTaGCTCTCGGAACTTGATGAG +
Preference number: 4 (lower is better)
Translates to: LGWVPKSATQITSFSNSLLRGDA*LSELDE
Trigger: CTCATCAAGTTCCGAGAGTCAGGCATCGCCTCGGAG...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGCAGAAACAAAGTACCTaGGAAGGTACCGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGQKQST*EGTDGF
Trigger: GAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTG...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAACAACTCGCAGCATCGTaGTATCCAGAAACAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKQLAAS*YPETKY
Trigger: GTACTTTGTTTCTGGATATCACGATGCTGCGAGTTG...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCAAAGCTTATCCACTGTaGCACATTCCAATTCCATGC +
Preference number: 4 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGKAYPL*HIPIPC
Trigger: GCATGGAATTGGAATGTGTCACAGTGGATAAGCTTT...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACTCACACCAAGGGCCTaGACCATGTTAAAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLLTPRA*TMLKLQ
Trigger: TTGAAGCTTTAACATGGTTCAGGCCCTTGGTGTGAG...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGGACAGACCAAGGTATaGTTAGAGGATAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDGQTKV*LEDRIF
Trigger: AAAAATCCTATCCTCTAATCATACCTTGGTCTGTCC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTATGGCCTCAAAGCAGATaGCGTGCTGGAAGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LGWVPKSATQITSFSNSLWPQSR*RAGRRP
Trigger: AGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCA...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CGAACATATGACTCTAGCAGGTCTCAGCAATCTCTTCAGGCATTTGAAAATCTGTCCAGCTCTTGCACCTaGTTGACCAGCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RTYDSSRSQQSLQAFENLSSSCT*LTSREM
Trigger: CATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCTGGA...CAGATTTTCAAATGCCTGAAGAGATTGCTGAGACCTGCTAGAGTCATATGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGTCGGGAAATCAGGTCTaGAATGTTCCCTTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRSGNQV*NVPFPA
Trigger: GGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGA...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATCCAGGGAGTAAGTaGACTTACATTAACAGAATC +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDHPGSK*TYINRI
Trigger: GATTCTGTTAATGTAAGTGCACTTACTCCCTGGATG...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTCCTTCCCACAGACCCTaGCCTATGCATCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASPSHRP*PMHLFH
Trigger: ATGGAAGAGATGCATAGGGCAGGGTCTGTGGGAAGG...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATTCAATGTCCGGCTaGAGAAAATGTTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDHSMSG*RKCLDS
Trigger: TGAATCCAAACATTTTCTCCAGCCGGACATTGAATG...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTCAGCTTCCATTTAGATaGGCTGGGCTACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASQLPFR*AGLQAG
Trigger: TCCTGCCTGTAGCCCAGCCCATCTAAATGGAAGCTG...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CGAACATATGACTCTAGCAGGTCTCAGCAATCTCTTCAGGCATTTGAAAATCTGGGGGCTCTGGTCCTCTaGGGCTTTCAGAGAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RTYDSSRSQQSLQAFENLGALVL*GFQRGK
Trigger: TTTACCTCTCTGAAAGCCCCAGAGGACCAGAGCCCC...CAGATTTTCAAATGCCTGAAGAGATTGCTGAGACCTGCTAGAGTCATATGTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTGAGGATGCAGGAAGATaGATGGGGAGTCAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPEDAGR*MGSQKH
Trigger: ATGCTTTTGACTCCCCATCCATCTTCCTGCATCCTC...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAAAAAGCTTATCCACTGTaGCACATTCCAATTCCATGC +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKKAYPL*HIPIPC
Trigger: GCATGGAATTGGAATGTGTCACAGTGGATAAGCTTT...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR TCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGCATATCCTTGCCGATTaGCCCTCCAATAACACTGCA +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRHILAD*PSNNTA
Trigger: TGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATG...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAATCACCAGTGGCCAATaGTGTAATCAATCATGCCTA +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQITSGQ*CNQSCL
Trigger: TAGGCATGATTGATTACATCATTGGCCACTGGTGAT...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCAAGTGCTCAAATTTCTaGAGAGGAGTTTGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFKCSNF*RGVCSK
Trigger: TTTGGAGCAAACTCCTCTTCAGAAATTTGAGCACTT...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp CTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAGCATCGTGATATCCAGAAATCTTGTGCAAAGAAGTaGATAAAGAGTTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LIKVGGGLGNSQHRDIQKSCAKK*IKSSPG
Trigger: CCCTGGAGAACTCTTTATTCACTTCTTTGCACAAGA...TTTCTGGATATCACGATGCTGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGCAGCTCTGTTCTTGGTaGGCAATACTTATGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGQLCSW*AILMWR
Trigger: TCTCCACATAAGTATTGCTCACCAAGAACAGAGCTG...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATTTCAGAGAGGTAAAGTaGTGCAAAAGCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EHSISTISARAWRRNSSHFREVK*CKSFSW
Trigger: CCAGCTGAAGCTTTTGCAGCACTTTACCTCTCTGAA...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR GCA 90 bp AAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTTGCCGATTGACTGCCCTCTGCAGAACTaGTTGCTTGCTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KARVDELHFGIIISLPIDCPLQN*LLAWCV
Trigger: CACACACCAAGCAAGCAAGCAGTTCTGCAGAGGGCA...GTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAACTGAGTTCTGTCAGTTaGTCTAGCAAATCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQLSSVS*SSKSVE
Trigger: CTCAACTGATTTGCTAGAGCAACTGACAGAACTCAG...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCACGATTCTCATAGCTTaGCTCTTCTTCTTGGATTTA +
Preference number: 4 (lower is better)
Translates to: GEELIHLWESDFFPTLPSTILIA*LFFLDL
Trigger: TAAATCCAAGAAGAAGAGCCAAGCTATGAGAATCGT...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CCA 90 bp AACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACACAACAGCTTTCCAGCAAGCTGTCCTaGGAGCCCATGGCGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NRIFSQRVDPTELMTQQLSSKLS*EPMAFC
Trigger: ACAGAACGCCATGGGCTCCCAGGACAGCTTGCTGGA...AAGCTGTTGTGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCATTCAATGTCCGGCTaGAGAAAATGTTTGGATTCA +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLHSMSG*RKCLDS
Trigger: TGAATCCAAACATTTTCTCCAGCCGGACATTGAATG...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAGTTAACAGCCACTTATaGCCTTACAGGAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLVNSHL*PYRSKG
Trigger: TCCTTTGCTCCTGTAAGGCCATAAGTGGCTGTTAAC...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCGCTCATTTAGTTTCATaGATCTCACTTTCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFAHLVS*ISLSWF
Trigger: GAACCAGGAAAGTGAGATCCATGAAACTAAATGAGC...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAACACAAATCTGTTGCTaGTTCAAACACCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: QVGEELIHLWESDFFPTLTQICC*FKHPGD
Trigger: ATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGT...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGTATCAGAATCAAACTaGGTTAGAGGACACTGTGTG +
Preference number: 4 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGVSESN*VRGHCV
Trigger: CACACAGTGTCCTCTAACTCAGTTTGATTCTGATAC...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAAGACATCTAGGACCATaGTTCATACCACATATTACC +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQRHLGP*FIPHIT
Trigger: GGTAATATGTGGTATGAATCATGGTCCTAGATGTCT...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp TCCAACAGAGTTAATGACACAACAGCTTTAGGAAGTAGAGTGCTAGTGGGTAGAGCATCACCAGCATCTTaGTCTCATCCCACGTCCATT +
Preference number: 4 (lower is better)
Translates to: SNRVNDTTALGSRVLVGRASPAS*SHPTSI
Trigger: AATGGACGTGGGATGAGAGCAAGATGCTGGTGATGC...TCTACCCACTAGCACTCTACTTCCTAAAGCTGTTGTGTCATTAACTCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp ACTTACATTAACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACAATGGGCTCCTGGGGGTaGGAAACCTTGGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TYINRIFSQRVDPTELMTMGSWG*ETLEPV
Trigger: CACAGGCTCCAAGGTTTCGCACCCCCAGGAGCCCAT...TGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTTAATGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp ACTTACATTAACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACAGCCACTTGTGTCTGCTaGTGCTGCTGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TYINRIFSQRVDPTELMTATCVC*CCCWRS
Trigger: GCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGC...TGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTTAATGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCAATAACACTGCAGTTTaGATCTGTACCTTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLNNTAV*ICTLLS
Trigger: AGACAACAAGGTACAGATGCAAACTGCAGTGTTATT...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR GCA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAATAACACTGCAGTTTaGATCTGTACCTTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVNNTAV*ICTLLS
Trigger: AGACAACAAGGTACAGATGCAAACTGCAGTGTTATT...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACC +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFASAAN*SFSKCT
Trigger: GGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGC...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp AGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGACTTTTCACTCCTCTaGACGTTCAAAATCTTAATA +
Preference number: 4 (lower is better)
Translates to: SLAFAVQSTQSLQSQQGPDFSLL*TFKILI
Trigger: TATTAAGATTTTGAACGTCCAGAGGAGTGAAAAGTC...AGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTTTTCACTCCATCCACTaGAACCATAATGCTCACTTT +
Preference number: 4 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPFHSIH*NHNAHF
Trigger: AAAGTGAGCATTATGGTTTCAGTGGATGGAGTGAAA...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp CGAACATATGACTCTAGCAGGTCTCAGCAATCTCTTCAGGCATTTGAAAATCTGTTCATCCCTGTTTCCTaGCATATAGCTCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: RTYDSSRSQQSLQAFENLFIPVS*HIAPQT
Trigger: GGTTTGGGGAGCTATATGTCAGGAAACAGGGATGAA...CAGATTTTCAAATGCCTGAAGAGATTGCTGAGACCTGCTAGAGTCATATGTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR TCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTTGCATTCAGCATGCTTaGGGCCCAGTGGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFCIQHA*GPVVST
Trigger: TGTTGACACCACTGGGCCTCAAGCATGCTGAATGCA...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR GCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTTCCACACACCAAGTATaGGCTGGTTTGGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFSTHQV*AGLGPL
Trigger: CAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGA...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTCAGCTTCCATTTAGATaGGCTGGGCTACAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFQLPFR*AGLQAG
Trigger: TCCTGCCTGTAGCCCAGCCCATCTAAATGGAAGCTG...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCTCGTTCTTTTCCGTCTaGTTACAATCCTACATATAT +
Preference number: 4 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLSFFSV*LQSYIY
Trigger: ATATATGTAGGATTGTAACCAGACGGAAAAGAACGA...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
3UTR CAA 72 bp AGGGTCGATGAACTCCATTTTGGGATAATCATATCCTaGCCGATTGACCCTCCAATAACACTGCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: RVDELHFGIIIS*PIDPPITLQFA
Trigger: TGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp TCCAACAGAGTTAATGACACAACAGCTTTAGGAAGTAGAGTGCTAGTGGGTAGACAACTCGCAGCATCGTaGTATCCAGAAACAAAGTAC +
Preference number: 4 (lower is better)
Translates to: SNRVNDTTALGSRVLVGRQLAAS*YPETKY
Trigger: GTACTTTGTTTCTGGATATCACGATGCTGCGAGTTG...TCTACCCACTAGCACTCTACTTCCTAAAGCTGTTGTGTCATTAACTCTGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR TCA 90 bp ATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGTGTTCACACATATGTaGTTCTTGTGCAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ISTISARAWRRNSSHKGRVFTHM*FLCKEV
Trigger: CACTTCTTTGCACAAGAATCACATATGTGTGAACAC...CCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CCA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAATCGTTCTTTTCCGTCTaGTTACAATCCTACATATAT +
Preference number: 4 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQSFFSV*LQSYIY
Trigger: ATATATGTAGGATTGTAACCAGACGGAAAAGAACGA...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp ACTTACATTAACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACAACACCAAGTATGCGCTaGTTTGGGTCCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TYINRIFSQRVDPTELMTTPSMR*FGSTGE
Trigger: CTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGT...TGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTTAATGTAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR GCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTAAGAGAGGTAAAGTGCTaGAAAAGCTTCAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LGWVPKSATQITSFSNSLREVKC*KSFSWT
Trigger: TGTCCAGCTGAAGCTTTTGCAGCACTTTACCTCTCT...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR TCA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTAACACAAATCTGTTGCTaGTTCAAACACCCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LGWVPKSATQITSFSNSLTQICC*FKHPGD
Trigger: ATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGT...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CCA 90 bp GGGATAATCATATCCTTGCCGATTGACCCTCCAATAACACTGCAGTTTGCATCTACGATTCTCATAGCTTaGCTCTTCTTCTTGGATTTA +
Preference number: 4 (lower is better)
Translates to: GIIISLPIDPPITLQFASTILIA*LFFLDL
Trigger: TAAATCCAAGAAGAAGAGCCAAGCTATGAGAATCGT...AGATGCAAACTGCAGTGTTATTGGAGGGTCAATCGGCAAGGATATGATTATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS TCA 90 bp GGCGGCCGGACCCGGAGCGGTGCCGAGGGCCGAGCGGCAGCGGGCTaGGCTGATGCGGGCGACGCGAGCGGCGCTGTGGTCGCGCAATTC +
Preference number: 5 (lower is better)
Translates to: GGRTRSGAEGRAAAG*ADAGDASGAVVAQF
Trigger: GAATTGCGCGACCACAGCGCCGCTCGCGTCGCCCGCATCAGCTCAGCCCGCTGCCGCTCGGCCCTCGGCACCGCTCCGGGTCCGGCCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS TCA 90 bp CCGGACCCGGAGCGGTGCCGAGGGCCGAGCGGCAGCGGGCTGAGCTaGTGCGGGCGACGCGAGCGGCGCTGTGGTCGCGCAATTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PDPERCRGPSGSGLS*CGRRERRCGRAIPA
Trigger: GGCAGGAATTGCGCGACCACAGCGCCGCTCGCGTCGCCCGCATCAGCTCAGCCCGCTGCCGCTCGGCCCTCGGCACCGCTCCGGGTCCGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CCA 90 bp GAGCGGCAGCGGGCTGAGCTGATGCGGGCGACGCGAGCGGCGCTGTaGTCGCGCAATTCCTGCCGGCTAGGAGGGCGGCAGGGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ERQRAELMRATRAAL*SRNSCRLGGRQGRR
Trigger: CCTCCTCCCCTGCCGCCCTCCTAGCCGGCAGGAATTGCGCGACCACAGCGCCGCTCGCGTCGCCCGCATCAGCTCAGCCCGCTGCCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CCA 90 bp TTGCGGCCCGAAGCGGGACTGGGCGCGGCGCCGGCCCCAGAGCAGTaGAACGCACCGCCCGGGACGAAGAAGAAAAGGCGACGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: LRPEAGLGAAPAPEQ*NAPPGTKKKRRRWR
Trigger: CCGCCACCGTCGCCTTTTCTTCTTCGTCCCGGGCGGTGCGTTCCACTGCTCTGGGGCCGGCGCCGCGCCCAGTCCCGCTTCGGGCCGCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCCCCTGCTGTTGGGCCTaGGCACGTCCAGGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: TRAAARHGPSSHAAASISPCCWA*ARPGFL
Trigger: TAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGG...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCCTGACTCTCGGAACTaGATGAGCTCCAGACCGCCC +
Preference number: 5 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLPDSRN*MSSRPP
Trigger: GGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGG...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp CATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCAAGGGCAGGAGTCTaGGATGGGTCCCAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: HPLPGQQPDTAPPATPPPPRAGV*DGSQSQ
Trigger: CTGACTTTGGGACCCATCCAAGACTCCTGCCCTTGG...AGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS TCA 90 bp GGGTCGTGGGGTCACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTaGTCTCCAGCAAGCTGTCCTGGGAGCCCACTCTCCGGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: GSWGHRARAGLRSGR*SPASCPGSPLSGLW
Trigger: CCAAAGCCCGGAGAGTGGGCTCCCAGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGTGACCCCACGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454693.1
CDS-3UTR CAA 90 bp CAGGCGCGGCAGCTCCTCCTGGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTCCTGACTCTCGGAACTaGATGAGCTCCAGACCGCCC +
Preference number: 5 (lower is better)
Translates to: QARQLLLGPRVALLALVRPDSRN*MSSRPP
Trigger: GGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGG...ACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCCAGGAGGAGCTGCCGCGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp ATCCCCTACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCAAGTATGCGCTGGTTaGGGTCCACTGGGGAGGATA +
Preference number: 5 (lower is better)
Translates to: IPYPGSSQTRPLQPRRRLQVCAG*GPLGRI
Trigger: TATCCTCCCCAGTGGACCCAAACCAGCGCATACTTG...GAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGTAGGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp TGCCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCGAATGCAGAGAACCAGAGCAATTaGCCCCACCACACACTGGGC +
Preference number: 5 (lower is better)
Translates to: CPQGGQSQPSPRPAAANAENQSN*PHHTLG
Trigger: GCCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTC...TGCATTCGCCGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS GCA 90 bp ATTCCCTGGAAGTGGGACCTCCACCGCATCGATGTCAGTCTCCTCTaGAGTGGCCGTGGAGGCCCTCTCGGCTCCAGTGAGCTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: IPWKWDLHRIDVSLL*SGRGGPLGSSELAA
Trigger: GGCCGCCAGCTCACTGGAGCCGAGAGGGCCTCCACGGCCACTGCAGAGGAGACTGACATCGATGCGGTGGAGGTCCCACTTCCAGGGAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS-3UTR CAA 90 bp AGCGGCGGCGAATGCAGGTCCTCTGGCTTAGGGGTCGTGGGGTCACAGAGCACGTGGAAGGCGTCCTCGTaGTGCAAGGGGATCCGCAGG +
Preference number: 5 (lower is better)
Translates to: SGGECRSSGLGVVGSQSTWKASS*CKGIRR
Trigger: CCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCA...CGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGACCTGCATTCGCCGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp CCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGCCACCCTGCTGTTGGGCCTaGGCACGTCCAGGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: PSSRAYLRGCPQGGQSQPPCCWA*ARPGFL
Trigger: TAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGG...TGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGCCCTTTCCTGCCCAGTaGGCCCTGATGGAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLPFPAQ*ALMEGR
Trigger: CCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGG...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp ACCCGGGCAGCAGCCAGACACGGCCCCTCCAGCCACGCCGCCGCCTCCATCTCCCTCAGAGAATTACACTaGTGGATACCGTGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TRAAARHGPSSHAAASISLRELH*WIPWLP
Trigger: AGGCAGCCACGGTATCCACAAGTGTAATTCTCTGAG...GGAGATGGAGGCGGCGGCGTGGCTGGAGGGGCCGTGTCTGGCTGCTGCCCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp CGCGCCGCAGCCTCAGCAGCCAACTGGTCCTTCAGCAAGTGTACCTaGGCCACAGCCACTTGTGTCTGCTGCTGCTGCTGCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RAAASAANWSFSKCT*ATATCVCCCCCWRS
Trigger: GCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGCTGCGGCGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp CAGGTCCTCTGGCTTAGGGGTCGTGGGGTCACAGAGCACGGGCAGGGCTCCGGAGGGTCTCCTGAGCTGTaGCTGTTCCTCTCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: QVLWLRGRGVTEHGQGSGGSPEL*LFLSLS
Trigger: AGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACCC...TCCGGAGCCCTGCCCGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp ACAGAGCACGGGCAGGGCTCCGGAGCGGAAGGTGATCTCCAGCAAGCTGTCCTGTCGCTCTCGTCCGTGTaGGACTCGTACTCCGAGGCG +
Preference number: 5 (lower is better)
Translates to: TEHGQGSGAEGDLQQAVLSLSSV*DSYSEA
Trigger: CGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGA...CAGGACAGCTTGCTGGAGATCACCTTCCGCTCCGGAGCCCTGCCCGTGCTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS GCA 90 bp GGGAGCTGCCGGGCAGCTGAACATTTAGAGGTTCCTGGAGGGTGGTaGACGTTGGGAGGGCATGGGAGCTCTGCCACCCTTCCCACAGAC +
Preference number: 5 (lower is better)
Translates to: GSCRAAEHLEVPGGW*TLGGHGSSATLPTD
Trigger: GTCTGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCAGGAACCTCTAAATGTTCAGCTGCCCGGCAGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp TGCCCAGGCCTGGAGGCTTCGAGGAAGAAGAAGGGAGCAGCATCCTaGGTGAGGCTGTCAGCATGGGCTCCTGGGGGTGCGAAACCTTGG +
Preference number: 5 (lower is better)
Translates to: CPGLEASRKKKGAAS*VRLSAWAPGGAKPW
Trigger: CCAAGGTTTCGCACCCCCAGGAGCCCATGCTGACAGCCTCACCCAGGATGCTGCTCCCTTCTTCTTCCTCGAAGCCTCCAGGCCTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp GTGGGGAGCTGCCGGGCAGCTGAACATTTAGAGGTTCCTGGAGGGTaGTGCACGTTGGGAGGGCATGGGAGCTCTGCCACCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: VGSCRAAEHLEVPGG*CTLGGHGSSATLPT
Trigger: TGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCAGGAACCTCTAAATGTTCAGCTGCCCGGCAGCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAGGGGAGCGGTGGGGCTaGCGGCCCGAAGCGGGACTG +
Preference number: 5 (lower is better)
Translates to: LFICVLKARTQRDGPRVAGERWG*RPEAGL
Trigger: CAGTCCCGCTTCGGGCCGCAAGCCCCACCGCTCCCC...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp GCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGCTCCTCCTTCAGTTCCAGCTCTaGCACCTGCTTGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: AVAQFLPLQDIQQARQLLLQFQL*HLLDQQ
Trigger: CTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAAG...GAGGAGCTGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTGTGGCTGCCTCCCTCTaGCCCAGATTGGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LAVLERDPLLKPWALEGLVAASL*PRLEAL
Trigger: CAGGGCCTCCAATCTGGGCAAGAGGGAGGCAGCCAC...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTCCTTGGCCAAGTGACTaGCTGGCCCAGGGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LAVLERDPLLKPWALEGLPWPSD*LAQGVP
Trigger: GGGCACACCCTGGGCCAGCAAGTCACTTGGCCAAGG...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 90 bp GCTGGAGGAGCTGCATCTGGTGGTGAGTGGACAGCGGTGTCTCTGTaGCCAGGCCTGGAGGCTTCGAGGAAGAAGAAGGGAGCAGCATCC +
Preference number: 5 (lower is better)
Translates to: AGGAASGGEWTAVSL*PGLEASRKKKGAAS
Trigger: GGATGCTGCTCCCTTCTTCTTCCTCGAAGCCTCCAGGCCTGGGCACAGAGACACCGCTGTCCACTCACCACCAGATGCAGCTCCTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS-3UTR CAA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTGGGGAGCGGTGGGGCTaGCGGCCCGAAGCGGGACTG +
Preference number: 5 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVGERWG*RPEAGL
Trigger: CAGTCCCGCTTCGGGCCGCAAGCCCCACCGCTCCCC...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGGGGTCTCCTGAGCTGTaGCTGTTCCTCTCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLGSPEL*LFLSLS
Trigger: AGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACCC...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS GCA 90 bp TCGCTCTCTCCATCTTCCTGGCCATCTGCATTCTGCTGCGTGTGCTaGAGGCTCAGCTTGTGGCAGACCTCAAAGGCCTGCCCCACCGTC +
Preference number: 5 (lower is better)
Translates to: SLSPSSWPSAFCCVC*RLSLWQTSKACPTV
Trigger: GACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGAAGATGGAGAGAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 90 bp CTCTCGCTCTCTCCATCTTCCTGGCCATCTGCATTCTGCTGCGTGTaGTGCAGGCTCAGCTTGTGGCAGACCTCAAAGGCCTGCCCCACC +
Preference number: 5 (lower is better)
Translates to: LSLSPSSWPSAFCCV*CRLSLWQTSKACPT
Trigger: GGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGAAGATGGAGAGAGCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 90 bp AGAGCAATTTGCCCCACCACACACTGGGCCACAGCCACTTGTGTCTaGTGCTGCTGCTGCTGGAGGAGCTGCTGGAGGAGCTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: RAICPTTHWATATCV*CCCCWRSCWRSCIW
Trigger: CCAGATGCAGCTCCTCCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGTGTGTGGTGGGGCAAATTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS GCA 90 bp AGAGGTTCCTGGAGGGTGGTGCACGTTGGGAGGGCATGGGAGCTCTaGCACCCTTCCCACAGACCCTGCCCTATGCATCTCTTCCATCTG +
Preference number: 5 (lower is better)
Translates to: RGSWRVVHVGRAWEL*HPSHRPCPMHLFHL
Trigger: CAGATGGAAGAGATGCATAGGGCAGGGTCTGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCAGGAACCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 90 bp AAGGGCAGTGCTACCTCACAGTTGGCCACCCTTGGCCAAGTGACTTaGTGGCCCAGGGTGTGCCCCTCCCAGCAACCAGCACTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KGSATSQLATLGQVT*WPRVCPSQQPALRE
Trigger: TTCTCTGAGTGCTGGTTGCTGGGAGGGGCACACCCTGGGCCAGCAAGTCACTTGGCCAAGGGTGGCCAACTGTGAGGTAGCACTGCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp ACGTCCAGGCTTCCTACGTACTTGGCCTCAAAGCAGATGCCGTGCTaGAAGGCGTCCTCGTTGTGCAAGGGGATCCGCAGGTCGTGCCCA +
Preference number: 5 (lower is better)
Translates to: TSRLPTYLASKQMPC*KASSLCKGIRRSCP
Trigger: TGGGCACGACCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCTGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp TATCCGGCGCATGGCAGCCACGATCTCCACCCTGCTGTTGGGCCTTaGCACGTCCAGGCTTCCTACGTACTTGGCCTCAAAGCAGATGCC +
Preference number: 5 (lower is better)
Translates to: YPAHGSHDLHPAVGP*HVQASYVLGLKADA
Trigger: GGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGGCTGCCATGCGCCGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp CATACCGTATCCGGCGCATGGCAGCCACGATCTCCACCCTGCTGTTaGGCCTTGGCACGTCCAGGCTTCCTACGTACTTGGCCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: HTVSGAWQPRSPPCC*ALARPGFLRTWPQS
Trigger: GCTTTGAGGCCAAGTACGTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGGCTGCCATGCGCCGGATACGGTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp GCACATGGCAGGGACTTGGGCAGTGCATGCCAGCGTGCTGGGGACTaGGAGAAGCCACAGGGACATATGCTAAATAGAGGGCCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: AHGRDLGSACQRAGD*EKPQGHMLNRGPGV
Trigger: CACCCCAGGCCCTCTATTTAGCATATGTCCCTGTGGCTTCTCCCAGTCCCCAGCACGCTGGCATGCACTGCCCAAGTCCCTGCCATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464284.1
CDS-3UTR CAA 90 bp CTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGCCAAGCCCGCGCCCAGCGGCGGCTTGGCTCTTCTTCTaGGATTTAAAGACGTTACAC +
Preference number: 5 (lower is better)
Translates to: LRGCPQGGQSQPSPRPAAAWLFF*DLKTLH
Trigger: GTGTAACGTCTTTAAATCCAAGAAGAAGAGCCAAGC...CGCCGCTGGGCGCGGGCTTGGCTGACTTTGCCCACCCTGCGGGCAGCCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCTTCAGTTCCAGCTCTaGCACCTGCTTGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTLQFQL*HLLDQQ
Trigger: CTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAAG...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAAT +
Preference number: 5 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTGLAWL*RSRALN
Trigger: ATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCC...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS GCA 90 bp AACTGGTCCTTCAGCAAGTGTACCTGGGCCACAGCCACTTGTGTCTaGTGCTGCTGCTGCTGGAGGAGCTGCTGGAGGAGCTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: NWSFSKCTWATATCV*CCCCWRSCWRSCIW
Trigger: CCAGATGCAGCTCCTCCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGGTACACTTGCTGAAGGACCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS GCA 90 bp CGCGCCGCAGCCTCAGCAGCCAACTGGTCCTTCAGCAAGTGTACCTaGAGAGAAGAGGCAGCGGCAGAGAAGACAGGACAGAGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RAAASAANWSFSKCT*REEAAAEKTGQREE
Trigger: CTCTTCTCTCTGTCCTGTCTTCTCTGCCGCTGCCTCTTCTCTGCAGGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGCTGCGGCGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp GGCAGTGCTACCTCACAGTTGGCCACCCTTGGCCAAGTGACTTGCTaGCCCAGGGTGTGCCCCTCCCAGCAACCAGCACTCAGAGAATTA +
Preference number: 5 (lower is better)
Translates to: GSATSQLATLGQVTC*PRVCPSQQPALREL
Trigger: TAATTCTCTGAGTGCTGGTTGCTGGGAGGGGCACACCCTGGGCCAGCAAGTCACTTGGCCAAGGGTGGCCAACTGTGAGGTAGCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp GGGACCACGAGTCGCGCTCCTCGCTCTCGTCCGTGTTGGACTCGTACTCCGAGGAGGTTGTACTTGGTTTaGCTAGGCATGGTTACCCGC +
Preference number: 5 (lower is better)
Translates to: GTTSRAPRSRPCWTRTPRRLYLV*LGMVTR
Trigger: GCGGGTAACCATGCCTAGCAAAACCAAGTACAACCT...CCTCGGAGTACGAGTCCAACACGGACGAGAGCGAGGAGCGCGACTCGTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp AGCGGCGGCGAATGCAGGTCCTCTGGCTTAGGGGTCGTGGGGTCACAGAGCACGCCATCGTCCACAAGGTaGTACTTGGTTTTGCTAGGC +
Preference number: 5 (lower is better)
Translates to: SGGECRSSGLGVVGSQSTPSSTR*YLVLLG
Trigger: GCCTAGCAAAACCAAGTACAACCTTGTGGACGATGG...CGTGCTCTGTGACCCCACGACCCCTAAGCCAGAGGACCTGCATTCGCCGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGCCCTGCTGTTGGGCCTaGGCACGTCCAGGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRPCCWA*ARPGFL
Trigger: TAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGG...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS GCA 90 bp TACTTGGCCTCAAAGCAGATGCCGTGCTGGAAGGCGTCCTCGTTGTaGAAGGGGATCCGCAGGTCGTGCCCATCGTCCACAAGGTTGTAC +
Preference number: 5 (lower is better)
Translates to: YLASKQMPCWKASSL*KGIRRSCPSSTRLY
Trigger: GTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp TCCTGGCCATCTGCATTCTGCTGCGTGTGCTGCAGGCTCAGCTTGTaGCAGACCTCAAAGGCCTGCCCCACCGTCCGAACGATTCTCATA +
Preference number: 5 (lower is better)
Translates to: SWPSAFCCVCCRLSL*QTSKACPTVRTILI
Trigger: TATGAGAATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp GGGTCTCCTGAGCTGTTGCTGTTCCTCTCGCTCTCTCCATCTTCCTaGCCATCTGCATTCTGCTGCGTGTGCTGCAGGCTCAGCTTGTGG +
Preference number: 5 (lower is better)
Translates to: GSPELLLFLSLSPSS*PSAFCCVCCRLSLW
Trigger: CCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGAAGATGGAGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp GAAATGGCAGTGGAGAGAACCAGAGCAATTTGCCCCACCACACACTaGGCCACAGCCACTTGTGTCTGCTGCTGCTGCTGCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: EMAVERTRAICPTTH*ATATCVCCCCCWRS
Trigger: GCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTCTCCACTGCCATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp GCCGTCGCCCAGTTCCTGCCTCTGCAGGACATTCAGCAGGCGCGGCAGCTCCTCTCCACAAGGTTGTACTaGGTTTTGCTAGGCATGGTT +
Preference number: 5 (lower is better)
Translates to: AVAQFLPLQDIQQARQLLSTRLY*VLLGMV
Trigger: AACCATGCCTAGCAAAACCAAGTACAACCTTGTGGA...GAGGAGCTGCCGCGCCTGCTGAATGTCCTGCAGAGGCAGGAACTGGGCGACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCCCATCGTCCACAAGGTaGTACTTGGTTTTGCTAGGC +
Preference number: 5 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTPSSTR*YLVLLG
Trigger: GCCTAGCAAAACCAAGTACAACCTTGTGGACGATGG...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp CTGGCAGTCCTGGAGAGAGACCCTCTCCTGAAGCCATGGGCTCTGGAAGGCCTTAGGCTTCCTACGTACTaGGCCTCAAAGCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: LAVLERDPLLKPWALEGLRLPTY*ASKQMP
Trigger: CGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCT...AAGGCCTTCCAGAGCCCATGGCTTCAGGAGAGGGTCTCTCTCCAGGACTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp TGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAATGGCTGTGGTCCTGCATCACCAGCATCTaGCTCTCATCCCACGTCCAT +
Preference number: 5 (lower is better)
Translates to: CSRHARREMGQGWQWLWSCITSI*LSSHVH
Trigger: ATGGACGTGGGATGAGAGCAAGATGCTGGTGATGCA...GGACCACAGCCATTGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGTTACACCTGAAGATATaGCTGGCACCATCTCGAGCG +
Preference number: 5 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLLHLKI*LAPSRA
Trigger: CGCTCGAGATGGTGCCAGCAATATCTTCAGGTGTAA...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp ATGCCTGACTCTCGGAACTTGATGAGCTCCAGACCGCCCAGGAGCGCCTCGCCCTTACACCTGAAGATATaGCTGGCACCATCTCGAGCG +
Preference number: 5 (lower is better)
Translates to: MPDSRNLMSSRPPRSASPLHLKI*LAPSRA
Trigger: CGCTCGAGATGGTGCCAGCAATATCTTCAGGTGTAA...GGGCGAGGCGCTCCTGGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATCGCTCTCGTCCGTGTaGGACTCGTACTCCGAGGCG +
Preference number: 5 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQSLSSV*DSYSEA
Trigger: CGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGA...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGGGAGGGTGGTGCACGTaGGGAGGGCATGGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLGGWCT*GGHGSS
Trigger: AGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCC...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAATGCATTCAGCATGCTaGAGGCCCAGTGGTGTCAAC +
Preference number: 5 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPMHSAC*RPSGVN
Trigger: GTTGACACCACTGGGCCTCAAGCATGCTGAATGCAT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 90 bp CCGTGCTGGAAGGCGTCCTCGTTGTGCAAGGGGATCCGCAGGTCGTaGCCATCGTCCACAAGGTTGTACTTGGTTTTGCTAGGCATGGTT +
Preference number: 5 (lower is better)
Translates to: PCWKASSLCKGIRRS*PSSTRLYLVLLGMV
Trigger: AACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 90 bp TGCTGCGTGTGCTGCAGGCTCAGCTTGTGGCAGACCTCAAAGGCCTaGCCCACCGTCCGAACGATTCTCATAGCTTGGCTCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: CCVCCRLSLWQTSKA*PTVRTILIAWLFFL
Trigger: CAAGAAGAAGAGCCAAGCTATGAGAATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS-3UTR CAA 90 bp CTGGGGCAGGCACCAATAAGGTTAGCACCCCTGGTGTCCATTTGTCCTCCATATTGGAAGGCGTCCTCGTaGTGCAAGGGGATCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LGQAPIRLAPLVSICPPYWKASS*CKGIRR
Trigger: CCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCA...ATATGGAGGACAAATGGACACCAGGGGTGCTAACCTTATTGGTGCCTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCTGGAAGGCGTCCTCGTaGTGCAAGGGGATCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GEELIHLWESDFFPTLPSWKASS*CKGIRR
Trigger: CCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCA...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp TGCTTGACCAGCAGGGAGATGTGCTGGAGCATGTCCTTGTTCTGCAGCAAAAGCATCTCCACCCTGCTGTaGGGCCTTGGCACGTCCAGG +
Preference number: 5 (lower is better)
Translates to: CLTSREMCWSMSLFCSKSISTLL*GLGTSR
Trigger: CCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGAT...GCTTTTGCTGCAGAACAAGGACATGCTCCAGCACATCTCCCTGCTGGTCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCATCTCCACCCTGCTGTaGGGCCTTGGCACGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GEELIHLWESDFFPTLPSISTLL*GLGTSR
Trigger: CCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGAT...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp GGGGTGTCCTCGGGCGGAAGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGTGCATCACCAGCATCTaGCTCTCATCCCACGTCCAT +
Preference number: 5 (lower is better)
Translates to: GVSSGGRKRKHSSFTKQSCITSI*LSSHVH
Trigger: ATGGACGTGGGATGAGAGCAAGATGCTGGTGATGCA...CGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCTTCCGCCCGAGGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS GCA 90 bp AGTAGCAGGCACATGGAAATGGCAGTGGAGAGAACCAGAGCAATTTaGCCCACCACACACTGGGCCACAGCCACTTGTGTCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSRHMEMAVERTRAI*PTTHWATATCVCCC
Trigger: GCAGCAGCAGACACAAGTGGCTGTGGCCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTCTCCACTGCCATTTCCATGTGCCTGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS CCA 90 bp ATCAGTCACACCTCGGCTGAATTCCAGGACATCATTCCCTGGAAGTaGGACCTCCACCGCATCGATGTCAGTCTCCTCTGCAGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: ISHTSAEFQDIIPWK*DLHRIDVSLLCSGR
Trigger: ACGGCCACTGCAGAGGAGACTGACATCGATGCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTGGAATTCAGCCGAGGTGTGACTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 90 bp GAAATGGCAGTGGAGAGAACCAGAGCAATTTGCCCCACCACACACTaGACACAGAAGCAGAGGCAGGCGCCGCTGTCTCAGCATGCACAT +
Preference number: 5 (lower is better)
Translates to: EMAVERTRAICPTTH*TQKQRQAPLSQHAH
Trigger: ATGTGCATGCTGAGACAGCGGCGCCTGCCTCTGCTTCTGTGTCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTCTCCACTGCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464284.1
CDS-3UTR CAA 90 bp AGAAAGCGAAAGCACTCCAGCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGAGGCTTCCTACGTACTaGGCCTCAAAGCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: RKRKHSSFTKQSRLPKGLRLPTY*ASKQMP
Trigger: CGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCT...CAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGCTGGAGTGCTTTCGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp ATCTCAAGTTTTTACAGGCCATTTAGAAGCGGCCTTCCTCACCCACTCCCTGGCATCTCCACCCTGCTGTaGGGCCTTGGCACGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ISSFYRPFRSGLPHPLPGISTLL*GLGTSR
Trigger: CCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGAT...GCCAGGGAGTGGGTGAGGAAGGCCGCTTCTAAATGGCCTGTAAAAACTTGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACCCTGACTCTCGGAACTaGATGAGCTCCAGACCGCCC +
Preference number: 5 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNPDSRN*MSSRPP
Trigger: GGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGG...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGCCTGACTCTCGGAACTaGATGAGCTCCAGACCGCCC +
Preference number: 5 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLPDSRN*MSSRPP
Trigger: GGGCGGTCTGGAGCTCATCAAGTTCCGAGAGTCAGG...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp CGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCTCGCTCTCGTCCGTGTaGGACTCGTACTCCGAGGCG +
Preference number: 5 (lower is better)
Translates to: RSRALNLYNLSKGLEKEFSLSSV*DSYSEA
Trigger: CGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGA...GAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAAT +
Preference number: 5 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRGLAWL*RSRALN
Trigger: ATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCC...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp CTGCCCAGTGGAGGGGACAGGTTGAGAGGTAAGGCTGGGGGCTCTGGTCCTCTGTCAGATCTAAGTGATTaGGAGCAGCAGACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: LPSGGDRLRGKAGGSGPLSDLSD*EQQTSC
Trigger: ACAGCTTGTCTGCTGCTCCAAATCACTTAGATCTGA...CAGAGGACCAGAGCCCCCAGCCTTACCTCTCAACCTGTCCCCTCCACTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS GCA 90 bp CACGTTGGGAGGGCATGGGAGCTCTGCCACCCTTCCCACAGACCCTaGCCTATGCATCTCTTCCATCTGGTGTTCATTGGTATCCCTTAT +
Preference number: 5 (lower is better)
Translates to: HVGRAWELCHPSHRP*PMHLFHLVFIGIPY
Trigger: ATAAGGGATACCAATGAACACCAGATGGAAGAGATGCATAGGGCAGGGTCTGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGGGTCTCCTGAGCTGTaGCTGTTCCTCTCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDGSPEL*LFLSLS
Trigger: AGAGAGCGAGAGGAACAGCAACAGCTCAGGAGACCC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp TGCTTGACCAGCAGGGAGATGTGCTGGAGCATGTCCTTGTTCTGCAGCAAAAGCAGCTCTTGCACCTGCTaGACCAGCAGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: CLTSREMCWSMSLFCSKSSSCTC*TSREMC
Trigger: GCACATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCT...GCTTTTGCTGCAGAACAAGGACATGCTCCAGCACATCTCCCTGCTGGTCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp TCTGGAAGGCCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATAGCTCTTGCACCTGCTaGACCAGCAGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: SGRPYLHHPLVTSRRGADSSCTC*TSREMC
Trigger: GCACATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCT...ATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGGCCTTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp AGGACTAGCCTGGCTTTTGCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAATCGCTCTCGTCCGTGTaGGACTCGTACTCCGAGGCG +
Preference number: 5 (lower is better)
Translates to: RTSLAFAVQSTQSLQSQQSLSSV*DSYSEA
Trigger: CGCCTCGGAGTACGAGTCCAACACGGACGAGAGCGA...TTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp CAGGGTGACATCGTCGGGAAATCAGGTCTGCAATGTTCCCTTTCCTGCCCAGTTCCAAGGGCAGGAGTCTaGGATGGGTCCCAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: QGDIVGKSGLQCSLSCPVPRAGV*DGSQSQ
Trigger: CTGACTTTGGGACCCATCCAAGACTCCTGCCCTTGG...AACTGGGCAGGAAAGGGAACATTGCAGACCTGATTTCCCGACGATGTCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp TCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGCCCTTTCCTGCCCAGTaGGCCCTGATGGAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: SLQSQQGPGEGIPLIKVGPFPAQ*ALMEGR
Trigger: CCGACCCTCCATCAGGGCCAACTGGGCAGGAAAGGG...CCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGCATGGCATGCCATGTaGGAGGTGGAAGGGGGCACT +
Preference number: 5 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLAWHAM*EVEGGT
Trigger: AGTGCCCCCTTCCACCTCCAACATGGCATGCCATGC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 90 bp AGCCTCCTTCCTTCCCTACAGCATCTAGATCAGTCACACCTCGGCTaGATTCCAGGACATCATTCCCTGGAAGTGGGACCTCCACCGCAT +
Preference number: 5 (lower is better)
Translates to: SLLPSLQHLDQSHLG*IPGHHSLEVGPPPH
Trigger: ATGCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTGGAATTCAGCCGAGGTGTGACTGATCTAGATGCTGTAGGGAAGGAAGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS TCA 90 bp CACATATTACCAGGACCACCTGGTAGGGGTCAAACATTTGCTGACTaGTTCATGAGAGGGCCTCCTCCAACCAGCCCAGAAGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: HILPGPPGRGQTFAD*FMRGPPPTSPEGLR
Trigger: CCTCAGCCCTTCTGGGCTGGTTGGAGGAGGCCCTCTCATGAATCAGTCAGCAAATGTTTGACCCCTACCAGGTGGTCCTGGTAATATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 90 bp TGGGTTCACTGGCACTGCGAAGCTGTGTGTCCTAAGGGAGGGCCATaGTGCATCACTAAGGTACCCATACCAAGGGCAAGAGGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: WVHWHCEAVCPKGGP*CITKVPIPRARGRK
Trigger: TTTCCTGCCTCTTGCCCTTGGTATGGGTACCTTAGTGATGCATCATGGCCCTCCCTTAGGACACACAGCTTCGCAGTGCCAGTGAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp AGGGCCTCCTCCAACCAGCCCAGAAGGGCTGAGGTGAACAATTTGTaGCACCCTCATCAGTTTCCAACCTTCTTAAGGCAGAGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: RASSNQPRRAEVNNL*HPHQFPTFLRQSSW
Trigger: CCAACTGCTCTGCCTTAAGAAGGTTGGAAACTGATGAGGGTGCCACAAATTGTTCACCTCAGCCCTTCTGGGCTGGTTGGAGGAGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp TCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTCAGGAAGATCTTCAAGTCTaGGGAATCATGAGAGACATA +
Preference number: 5 (lower is better)
Translates to: SPSSRAYLRGCPQGGQSQEDLQV*GIMRDI
Trigger: TATGTCTCTCATGATTCCCAAGACTTGAAGATCTTC...CTGACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp GGGCCCTGGCTGGCATTCTCCTCGGCAGTGCACATTCACTGGGCATCCCCTACCAACGATTCTCATAGCTaGGCTCTTCTTCTTGGATTT +
Preference number: 5 (lower is better)
Translates to: GPWLAFSSAVHIHWASPTNDSHS*ALLLGF
Trigger: AAATCCAAGAAGAAGAGCCAAGCTATGAGAATCGTT...GGTAGGGGATGCCCAGTGAATGTGCACTGCCGAGGAGAATGCCAGCCAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp GCTTCACCAAGCAGTCGCGCCTACCTAAGGGGCTGCCCGCAGGGTGGGCAAAGTAACGATTCTCATAGCTaGGCTCTTCTTCTTGGATTT +
Preference number: 5 (lower is better)
Translates to: ASPSSRAYLRGCPQGGQSNDSHS*ALLLGF
Trigger: AAATCCAAGAAGAAGAGCCAAGCTATGAGAATCGTT...ACTTTGCCCACCCTGCGGGCAGCCCCTTAGGTAGGCGCGACTGCTTGGTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS-3UTR CAA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACGGACTAGCCTGGCTTTaGCGGTCCAGAGCACTCAAT +
Preference number: 5 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNGLAWL*RSRALN
Trigger: ATTGAGTGCTCTGGACCGCAAAAGCCAGGCTAGTCC...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTATCCCTCTTGCCCAGATaGGAGGCCCTGACCTTGCCG +
Preference number: 5 (lower is better)
Translates to: QVGEELIHLWESDFFPTLSLLPR*EALTLP
Trigger: CGGCAAGGTCAGGGCCTCCAATCTGGGCAAGAGGGA...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp TTGTCTCCCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGCTTAAGGCAGAGCAGTaGGCAGCAATGCATTCAGCA +
Preference number: 5 (lower is better)
Translates to: LSPISTHQVCAGLGPLGRLKAEQ*AAMHSA
Trigger: TGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAG...CCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGGGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp TCCTGCCCAGTTGGCCCTGATGGAGGGTCGGTGGCTGGTGATCCTTCAAGGCTCACCAAAACTCATCTATaGACCCACTGGCTAAGAACA +
Preference number: 5 (lower is better)
Translates to: SCPVGPDGGSVAGDPSRLTKTHL*THWLRT
Trigger: TGTTCTTAGCCAGTGGGTCAATAGATGAGTTTTGGT...GAGCCTTGAAGGATCACCAGCCACCGACCCTCCATCAGGGCCAACTGGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp ACAGGACAGAGAGAAGAGAGGGACATGAATGCACATGAGAGTCACTaGCAGATGGCCGGGACCAGAGATGCCCTCCACATTCAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: TGQREERDMNAHESH*QMAGTRDALHIQFK
Trigger: CTTGAACTGAATGTGGAGGGCATCTCTGGTCCCGGCCATCTGCCAGTGACTCTCATGTGCATTCATGTCCCTCTCTTCTCTCTGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp GAGCAGCAGACAAGCTGTCCTCCCCCTGGGCTCTCACACCAAGGGCCTGAACCAAACGATTCTCATAGCTaGGCTCTTCTTCTTGGATTT +
Preference number: 5 (lower is better)
Translates to: EQQTSCPPPGLSHQGPEPNDSHS*ALLLGF
Trigger: AAATCCAAGAAGAAGAGCCAAGCTATGAGAATCGTT...TGGTTCAGGCCCTTGGTGTGAGAGCCCAGGGGGAGGACAGCTTGTCTGCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTCTTCAGTTCCAGCTCTaGCACCTGCTTGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVLQFQL*HLLDQQ
Trigger: CTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAAG...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp GCGGTCCAGAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCTTCAGTTCCAGCTCTaGCACCTGCTTGACCAGCAG +
Preference number: 5 (lower is better)
Translates to: AVQSTQSLQSQQGPGEGILQFQL*HLLDQQ
Trigger: CTGCTGGTCAAGCAGGTGCAAGAGCTGGAACTGAAG...AATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTCTGGACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS CCA 90 bp CACATTCAGTTCAAGAAGAAGCCCTTCACGGGCAGCATGGGCATCTaGGCTTATCATTCCAGAGGAGGAGCCAAAAGGAGTGGGTTCACT +
Preference number: 5 (lower is better)
Translates to: HIQFKKKPFTGSMGI*AYHSRGGAKRSGFT
Trigger: AGTGAACCCACTCCTTTTGGCTCCTCCTCTGGAATGATAAGCCCAGATGCCCATGCTGCCCGTGAAGGGCTTCTTCTTGAACTGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp CTTTTTATATGTGTGCTCAAGGCACGCACGCAGAGAGATGGGCCAAGGGTGGCAAGGTTGTACTTGGTTTaGCTAGGCATGGTTACCCGC +
Preference number: 5 (lower is better)
Translates to: LFICVLKARTQRDGPRVARLYLV*LGMVTR
Trigger: GCGGGTAACCATGCCTAGCAAAACCAAGTACAACCT...TGCCACCCTTGGCCCATCTCTCTGCGTGCGTGCCTTGAGCACACATATAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCAAGGTTGTACTTGGTTTaGCTAGGCATGGTTACCCGC +
Preference number: 5 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLARLYLV*LGMVTR
Trigger: GCGGGTAACCATGCCTAGCAAAACCAAGTACAACCT...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp AAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCATGGAGACGTCCACAAGGTTGTACTaGGTTTTGCTAGGCATGGTT +
Preference number: 5 (lower is better)
Translates to: KYLRRYRWLPFLVGTMETSTRLY*VLLGMV
Trigger: AACCATGCCTAGCAAAACCAAGTACAACCTTGTGGA...CGTCTCCATGGTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACCCATCGTCCACAAGGTaGTACTTGGTTTTGCTAGGC +
Preference number: 5 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDPSSTR*YLVLLG
Trigger: GCCTAGCAAAACCAAGTACAACCTTGTGGACGATGG...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp AGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCTGCATCACCAGCATCTaGCTCTCATCCCACGTCCAT +
Preference number: 5 (lower is better)
Translates to: RRGADSPLGIRFLPHFTLCITSI*LSSHVH
Trigger: ATGGACGTGGGATGAGAGCAAGATGCTGGTGATGCA...GAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTAGCTCTTGCACCTGCTaGACCAGCAGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPSSCTC*TSREMC
Trigger: GCACATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCT...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp CCATCTCCACACACCAAGTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAAGCTGAGGTGAACAATTaGTGGCACCCTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: PSPHTKYALVWVHWGGYQAEVNN*WHPHQF
Trigger: AAACTGATGAGGGTGCCACAAATTGTTCACCTCAGC...TTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATACTTGGTGTGTGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 90 bp TCCAACCTTCTTAAGGCAGAGCAGTTGGCAGCAATGCATTCAGCATaGTTGAGGCCCAGTGGTGTCAACAGCTCTGTTCTTGGTGAGCAA +
Preference number: 5 (lower is better)
Translates to: SNLLKAEQLAAMHSA*LRPSGVNSSVLGEQ
Trigger: TTGCTCACCAAGAACAGAGCTGTTGACACCACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAGAAGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTAAGGCTTCCTACGTACTaGGCCTCAAAGCAGATGCCG +
Preference number: 5 (lower is better)
Translates to: QVGEELIHLWESDFFPTLRLPTY*ASKQMP
Trigger: CGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCT...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp GGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTACCCTCCGGGAAAAGGGTGTTCTaGTACCAAAACCATGGTGTG +
Preference number: 5 (lower is better)
Translates to: GEELIHLWESDFFPTLPSGKRVF*YQNHGV
Trigger: CACACCATGGTTTTGGTACAAGAACACCCTTTTCCC...GGAGGGTAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 90 bp ACCTTCTTAAGGCAGAGCAGTTGGCAGCAATGCATTCAGCATGCTTaGGGCCCAGTGGTGTCAACAGCTCTGTTCTTGGTGAGCAATACT +
Preference number: 5 (lower is better)
Translates to: TFLRQSSWQQCIQHA*GPVVSTALFLVSNT
Trigger: AGTATTGCTCACCAAGAACAGAGCTGTTGACACCACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp CAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCAGATCTAAGTGATTaGGAGCAGCAGACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QGPGEGIPLIKVGGGLGNSDLSD*EQQTSC
Trigger: ACAGCTTGTCTGCTGCTCCAAATCACTTAGATCTGA...GTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATGCCCTGACCTTGCCGTaGACCCTATTTCTGATTGAG +
Preference number: 5 (lower is better)
Translates to: EHSISTISARAWRRNSSHALTLP*TLFLIE
Trigger: CTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGC...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATTTACACCTGAAGATATaGCTGGCACCATCTCGAGCG +
Preference number: 5 (lower is better)
Translates to: EHSISTISARAWRRNSSHLHLKI*LAPSRA
Trigger: CGCTCGAGATGGTGCCAGCAATATCTTCAGGTGTAA...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp CCTTACCTCCACCACCCTCTAGTCACAAGTAGGAGAGGAGCTGATTCACCTCTGGCTTGGCTCTTCTTCTaGGATTTAAAGACGTTACAC +
Preference number: 5 (lower is better)
Translates to: PYLHHPLVTSRRGADSPLAWLFF*DLKTLH
Trigger: GTGTAACGTCTTTAAATCCAAGAAGAAGAGCCAAGC...CAGAGGTGAATCAGCTCCTCTCCTACTTGTGACTAGAGGGTGGTGGAGGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp CGAACATATGACTCTAGCAGGTCTCAGCAATCTCTTCAGGCATTTGAAAATCTGAGTGCTACCTCACAGTaGGCCACCCTTGGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: RTYDSSRSQQSLQAFENLSATSQ*ATLGQV
Trigger: CACTTGGCCAAGGGTGGCCAACTGTGAGGTAGCACT...CAGATTTTCAAATGCCTGAAGAGATTGCTGAGACCTGCTAGAGTCATATGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp GCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTAGGCAACTCGCATCAACAGCTCTGTTCTaGGTGAGCAATACTTATGTG +
Preference number: 5 (lower is better)
Translates to: AWRRNSSHKGRGRVRQLASTALF*VSNTYV
Trigger: CACATAAGTATTGCTCACCAAGAACAGAGCTGTTGA...TGCGAGTTGCCTAACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp TCCAGAAACAAAGTACCTGAGAAGGTACCGATGGCTTCCCTTCCTGGTCGGGACGAAGATCTTCAAGTCTaGGGAATCATGAGAGACATA +
Preference number: 5 (lower is better)
Translates to: SRNKVPEKVPMASLPGRDEDLQV*GIMRDI
Trigger: TATGTCTCTCATGATTCCCAAGACTTGAAGATCTTC...GTCCCGACCAGGAAGGGAAGCCATCGGTACCTTCTCAGGTACTTTGTTTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp AAAGCTAGGGTCGATGAACTCCATTTTGGGATAATCATATCCTTGCCGATTGACTTGGAGGCCCTGACCTaGCCGTTGACCCTATTTCTG +
Preference number: 5 (lower is better)
Translates to: KARVDELHFGIIISLPIDLEALT*PLTLFL
Trigger: CAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAA...GTCAATCGGCAAGGATATGATTATCCCAAAATGGAGTTCATCGACCCTAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 90 bp AGATTGGAGGCCCTGACCTTGCCGTTGACCCTATTTCTGATTGAGTaGAGCCACAGGGGCATAATGCCTAAGGAATTTAAACTAAATCTG +
Preference number: 5 (lower is better)
Translates to: RLEALTLPLTLFLIE*SHRGIMPKEFKLNL
Trigger: CAGATTTAGTTTAAATTCCTTAGGCATTATGCCCCTGTGGCTCCACTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS-3UTR CAA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTATCCACAAGGTTGTACTaGGTTTTGCTAGGCATGGTT +
Preference number: 5 (lower is better)
Translates to: QVGEELIHLWESDFFPTLSTRLY*VLLGMV
Trigger: AACCATGCCTAGCAAAACCAAGTACAACCTTGTGGA...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS-3UTR CAA 90 bp GTATGCGCTGGTTTGGGTCCACTGGGGAGGATACCAATACACAAACTAGTCCTCGAAGATCTTCAAGTCTaGGGAATCATGAGAGACATA +
Preference number: 5 (lower is better)
Translates to: VCAGLGPLGRIPIHKLVLEDLQV*GIMRDI
Trigger: TATGTCTCTCATGATTCCCAAGACTTGAAGATCTTC...GAGGACTAGTTTGTGTATTGGTATCCTCCCCAGTGGACCCAAACCAGCGCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp AACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACACAACAGCTTAGCTCTTGCACCTGCTaGACCAGCAGGGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: NRIFSQRVDPTELMTQQLSSCTC*TSREMC
Trigger: GCACATCTCCCTGCTGGTCAAGCAGGTGCAAGAGCT...AAGCTGTTGTGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS-3UTR CAA 90 bp CAAGTAGGAGAGGAGCTGATTCACCTCTGGGAATCCGATTTCTTCCCCACTTTATCAGATCTAAGTGATTaGGAGCAGCAGACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: QVGEELIHLWESDFFPTLSDLSD*EQQTSC
Trigger: ACAGCTTGTCTGCTGCTCCAAATCACTTAGATCTGA...TAAAGTGGGGAAGAAATCGGATTCCCAGAGGTGAATCAGCTCCTCTCCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000493151.1
ENST00000530878.5
CDS-3UTR CAA 90 bp ATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATAAAGGTAGGGGGAGGGTTGTTTGCATCTGTACCTaGTTGTCTAGGATAAAGACT +
Preference number: 5 (lower is better)
Translates to: ISARAWRRNSSHKGRGRVVCICT*LSRIKT
Trigger: AGTCTTTATCCTAGACAACAAGGTACAGATGCAAAC...AACCCTCCCCCTACCTTTATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp CTCTGGCTTTATCCTCAGCTCCGGCTTACGTCAGAAAACAGACTTTTCACTCCTGGGATAATCATATCCTaGCCGATTGACCCTCCAATA +
Preference number: 5 (lower is better)
Translates to: LWLYPQLRLTSENRLFTPGIIIS*PIDPPI
Trigger: TATTGGAGGGTCAATCGGCAAGGATATGATTATCCC...AGGAGTGAAAAGTCTGTTTTCTGACGTAAGCCGGAGCTGAGGATAAAGCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp GAGCACTCAATCTCTACAATCTCAGCAAGGGCCTGGAGAAGGAATTCCTCTCATGGGATAATCATATCCTaGCCGATTGACCCTCCAATA +
Preference number: 5 (lower is better)
Translates to: EHSISTISARAWRRNSSHGIIIS*PIDPPI
Trigger: TATTGGAGGGTCAATCGGCAAGGATATGATTATCCC...ATGAGAGGAATTCCTTCTCCAGGCCCTTGCTGAGATTGTAGAGATTGAGTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp TTAGAAAACACAAATCTGTTGCTGATTCAAACACCCTGGAGATCCTCGTTCTTTCAAGTATGCGCTGGTTaGGGTCCACTGGGGAGGATA +
Preference number: 5 (lower is better)
Translates to: LENTNLLLIQTPWRSSFFQVCAG*GPLGRI
Trigger: TATCCTCCCCAGTGGACCCAAACCAGCGCATACTTG...AAAGAACGAGGATCTCCAGGGTGTTTGAATCAGCAACAGATTTGTGTTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp CTTGGATGGGTCCCAAAGTCAGCAACACAGATAACTAGTTTCTCCAATTCTTTAGTTTGCATCTGTACCTaGTTGTCTAGGATAAAGACT +
Preference number: 5 (lower is better)
Translates to: LGWVPKSATQITSFSNSLVCICT*LSRIKT
Trigger: AGTCTTTATCCTAGACAACAAGGTACAGATGCAAAC...TAAAGAATTGGAGAAACTAGTTATCTGTGTTGCTGACTTTGGGACCCATCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000493151.1
CDS-3UTR CAA 90 bp ACTTACATTAACAGAATCTTTTCCCAGAGAGTTGATCCAACAGAGTTAATGACAGCTTGGCTCTTCTTCTaGGATTTAAAGACGTTACAC +
Preference number: 5 (lower is better)
Translates to: TYINRIFSQRVDPTELMTAWLFF*DLKTLH
Trigger: GTGTAACGTCTTTAAATCCAAGAAGAAGAGCCAAGC...TGTCATTAACTCTGTTGGATCAACTCTCTGGGAAAAGATTCTGTTAATGTAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS TCA 90 bp AAGAAGCTTTTTCTTCTTCTTCAGAATCACTTTCACTCCATCCACTaGAACCATAATGCTCACTTTCTTCTTCTTGATGTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KKLFLLLQNHFHSIH*NHNAHFLLLDVLGF
Trigger: AAAGCCAAGAACATCAAGAAGAAGAAAGTGAGCATTATGGTTTCAGTGGATGGAGTGAAAGTGATTCTGAAGAAGAAGAAAAAGCTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361897.10
CDS TCA 90 bp CTTTTTCTTTTTCTTCTTCTTCAGAATCACTTTCACTCCATCCACTaGAACCATAATGCTCACTTTCTTCTTCTTGATGTTCTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LFLFLLLQNHFHSIH*NHNAHFLLLDVLGF
Trigger: AAAGCCAAGAACATCAAGAAGAAGAAAGTGAGCATTATGGTTTCAGTGGATGGAGTGAAAGTGATTCTGAAGAAGAAGAAAAAGAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430120.3
ENST00000530878.5
CDS TCA 72 bp ACCCGGAGCGGTGCCGAGGGCCGAGCGGCAGCGGGCTaGGCTGATGCGGGCGACGCGAGCGGCGCTGTGGTC +
Preference number: 6 (lower is better)
Translates to: TRSGAEGRAAAG*ADAGDASGAVV
Trigger: GACCACAGCGCCGCTCGCGTCGCCCGCATCAGCTCAGCCCGCTGCCGCTCGGCCCTCGGCACCGCTCCGGGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CCA 72 bp CGGGCTGAGCTGATGCGGGCGACGCGAGCGGCGCTGTaGTCGCGCAATTCCTGCCGGCTAGGAGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: RAELMRATRAAL*SRNSCRLGGRQ
Trigger: CTGCCGCCCTCCTAGCCGGCAGGAATTGCGCGACCACAGCGCCGCTCGCGTCGCCCGCATCAGCTCAGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CCA 72 bp TGGGCCTCCAGCCGCGCCGCAGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACCTGGGCCACAGCCACT +
Preference number: 6 (lower is better)
Translates to: WASSRAAASAAN*SFSKCTWATAT
Trigger: AGTGGCTGTGGCCCAGGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGCTGCGGCGCGGCTGGAGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CCA 72 bp TGGGCCTCCAGCCGCGCCGCAGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACCTGGACTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: WASSRAAASAAN*SFSKCTWTPAP
Trigger: AGGAGCTGGAGTCCAGGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGCTGCGGCGCGGCTGGAGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430120.3
ENST00000464284.1
CDS CCA 72 bp GAAGCAGAGGCAGGCGCCGCTGTCTCAGCATGCACATaGCAGGGACTTGGGCAGTGCATGCCAGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EAEAGAAVSACT*QGLGQCMPACW
Trigger: CCAGCACGCTGGCATGCACTGCCCAAGTCCCTGCCATGTGCATGCTGAGACAGCGGCGCCTGCCTCTGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464284.1
CDS CAA 90 bp AAGCAGAGGCAGGCGCCGCTGTCTCAGCATGCACATGGCAGGGACTaGGGCAGTGCATGCCAGCGTGCTGGGGACTGGGAGAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: KQRQAPLSQHAHGRD*GSACQRAGDWEKPQ
Trigger: CTGTGGCTTCTCCCAGTCCCCAGCACGCTGGCATGCACTGCCCAAGTCCCTGCCATGTGCATGCTGAGACAGCGGCGCCTGCCTCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464284.1
CDS GCA 72 bp AAGTGGGACCTCCACCGCATCGATGTCAGTCTCCTCTaGAGTGGCCGTGGAGGCCCTCTCGGCTCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: KWDLHRIDVSLL*SGRGGPLGSSE
Trigger: CTCACTGGAGCCGAGAGGGCCTCCACGGCCACTGCAGAGGAGACTGACATCGATGCGGTGGAGGTCCCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 72 bp TGGAGGGTGGTGCACGTTGGGAGGGCATGGGAGCTCTaGCACCCTTCCCACAGACCCTGCCCTATGCATCTC +
Preference number: 6 (lower is better)
Translates to: WRVVHVGRAWEL*HPSHRPCPMHL
Trigger: GAGATGCATAGGGCAGGGTCTGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp TCCGGCGCATGGCAGCCACGATCTCCACCCTGCTGTTaGGCCTTGGCACGTCCAGGCTTCCTACGTACTTGG +
Preference number: 6 (lower is better)
Translates to: SGAWQPRSPPCC*ALARPGFLRTW
Trigger: CCAAGTACGTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGGCTGCCATGCGCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 72 bp TGGGCCTCCAGCCGCGCCGCAGCCTCAGCAGCCAACTaGTCCTTCAGCAAGTGTACCTGCAGAGAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: WASSRAAASAAN*SFSKCTCREEA
Trigger: TGCCTCTTCTCTGCAGGTACACTTGCTGAAGGACCAGTTGGCTGCTGAGGCTGCGGCGCGGCTGGAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp TGCTACCTCACAGTTGGCCACCCTTGGCCAAGTGACTaGCTGGCCCAGGGTGTGCCCCTCCCAGCAACCAGC +
Preference number: 6 (lower is better)
Translates to: CYLTVGHPWPSD*LAQGVPLPATS
Trigger: GCTGGTTGCTGGGAGGGGCACACCCTGGGCCAGCAAGTCACTTGGCCAAGGGTGGCCAACTGTGAGGTAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp GGGATCCGCAGGTCGTGCCCATCGTCCACAAGGTTGTACTTGGTTTaGCTAGGCATGGTTACCCGCGGCGGACCCGCTCCTTCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: GIRRSCPSSTRLYLV*LGMVTRGGPAPSEA
Trigger: CGCCTCCGAAGGAGCGGGTCCGCCGCGGGTAACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp TGCCGGGCAGCTGAACATTTAGAGGTTCCTGGAGGGTGGTGCACGTaGGGAGGGCATGGGAGCTCTGCCACCCTTCCCACAGACCCTGCC +
Preference number: 6 (lower is better)
Translates to: CRAAEHLEVPGGWCT*GGHGSSATLPTDPA
Trigger: GGCAGGGTCTGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCAGGAACCTCTAAATGTTCAGCTGCCCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp TCTGCATTCTGCTGCGTGTGCTGCAGGCTCAGCTTGTaGCAGACCTCAAAGGCCTGCCCCACCGTCCGAACG +
Preference number: 6 (lower is better)
Translates to: SAFCCVCCRLSL*QTSKACPTVRT
Trigger: CGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp CCATCTGCATTCTGCTGCGTGTGCTGCAGGCTCAGCTaGTGGCAGACCTCAAAGGCCTGCCCCACCGTCCGA +
Preference number: 6 (lower is better)
Translates to: PSAFCCVCCRLS*WQTSKACPTVR
Trigger: TCGGACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp TGCAAGGGGATCCGCAGGTCGTGCCCATCGTCCACAAGGTTGTACTaGGTTTTGCTAGGCATGGTTACCCGCGGCGGACCCGCTCCTTCG +
Preference number: 6 (lower is better)
Translates to: CKGIRRSCPSSTRLY*VLLGMVTRGGPAPS
Trigger: CGAAGGAGCGGGTCCGCCGCGGGTAACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp GTATCCGGCGCATGGCAGCCACGATCTCCACCCTGCTGTTGGGCCTaGGCACGTCCAGGCTTCCTACGTACTTGGCCTCAAAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: VSGAWQPRSPPCCWA*ARPGFLRTWPQSRC
Trigger: GCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGGCTGCCATGCGCCGGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp AGCAGCCAACTGGTCCTTCAGCAAGTGTACCTGGGCCACAGCCACTaGTGTCTGCTGCTGCTGCTGCTGGAGGAGCTGCTGGAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SSQLVLQQVYLGHSH*CLLLLLLEELLEEL
Trigger: CAGCTCCTCCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGGTACACTTGCTGAAGGACCAGTTGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CAA 90 bp GAGAACCAGAGCAATTTGCCCCACCACACACTGGGCCACAGCCACTaGTGTCTGCTGCTGCTGCTGCTGGAGGAGCTGCTGGAGGAGCTG +
Preference number: 6 (lower is better)
Translates to: ENQSNLPHHTLGHSH*CLLLLLLEELLEEL
Trigger: CAGCTCCTCCAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS CAA 90 bp AAAGGGCAGTGCTACCTCACAGTTGGCCACCCTTGGCCAAGTGACTaGCTGGCCCAGGGTGTGCCCCTCCCAGCAACCAGCACTCAGAGA +
Preference number: 6 (lower is better)
Translates to: KGQCYLTVGHPWPSD*LAQGVPLPATSTQR
Trigger: TCTCTGAGTGCTGGTTGCTGGGAGGGGCACACCCTGGGCCAGCAAGTCACTTGGCCAAGGGTGGCCAACTGTGAGGTAGCACTGCCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 72 bp TCAAAGCAGATGCCGTGCTGGAAGGCGTCCTCGTTGTaGAAGGGGATCCGCAGGTCGTGCCCATCGTCCACA +
Preference number: 6 (lower is better)
Translates to: SKQMPCWKASSL*KGIRRSCPSST
Trigger: TGTGGACGATGGGCACGACCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 72 bp TGCACATGGCAGGGACTTGGGCAGTGCATGCCAGCGTaGTGGGGACTGGGAGAAGCCACAGGGACATATGCT +
Preference number: 6 (lower is better)
Translates to: CTWQGLGQCMPA*WGLGEATGTYA
Trigger: AGCATATGTCCCTGTGGCTTCTCCCAGTCCCCAGCACGCTGGCATGCACTGCCCAAGTCCCTGCCATGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464284.1
CDS GCA 72 bp CGGGCAGCTGAACATTTAGAGGTTCCTGGAGGGTGGTaGACGTTGGGAGGGCATGGGAGCTCTGCCACCCTT +
Preference number: 6 (lower is better)
Translates to: RAAEHLEVPGGW*TLGGHGSSATL
Trigger: AAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCAGGAACCTCTAAATGTTCAGCTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp GTGGTGAGTGGACAGCGGTGTCTCTGTGCCCAGGCCTaGAGGCTTCGAGGAAGAAGAAGGGAGCAGCATCCT +
Preference number: 6 (lower is better)
Translates to: VVSGQRCLCAQA*RLRGRRREQHP
Trigger: AGGATGCTGCTCCCTTCTTCTTCCTCGAAGCCTCCAGGCCTGGGCACAGAGACACCGCTGTCCACTCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp CTGGTCCTTCAGCAAGTGTACCTGGGCCACAGCCACTaGTGTCTGCTGCTGCTGCTGCTGGAGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LVLQQVYLGHSH*CLLLLLLEELL
Trigger: CAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGGTACACTTGCTGAAGGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361897.10
ENST00000530878.5
CDS CAA 72 bp AGCAATTTGCCCCACCACACACTGGGCCACAGCCACTaGTGTCTGCTGCTGCTGCTGCTGGAGGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: SNLPHHTLGHSH*CLLLLLLEELL
Trigger: CAGCAGCTCCTCCAGCAGCAGCAGCAGCAGACACAAGTGGCTGTGGCCCAGTGTGTGGTGGGGCAAATTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS CAA 90 bp TCGTTGTGCAAGGGGATCCGCAGGTCGTGCCCATCGTCCACAAGGTaGTACTTGGTTTTGCTAGGCATGGTTACCCGCGGCGGACCCGCT +
Preference number: 6 (lower is better)
Translates to: SLCKGIRRSCPSSTR*YLVLLGMVTRGGPA
Trigger: AGCGGGTCCGCCGCGGGTAACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCACAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp ACGTACTTGGCCTCAAAGCAGATGCCGTGCTGGAAGGCGTCCTCGTaGTGCAAGGGGATCCGCAGGTCGTGCCCATCGTCCACAAGGTTG +
Preference number: 6 (lower is better)
Translates to: TYLASKQMPCWKASS*CKGIRRSCPSSTRL
Trigger: CAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCAAGTACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp TCATACCGTATCCGGCGCATGGCAGCCACGATCTCCACCCTGCTGTaGGGCCTTGGCACGTCCAGGCTTCCTACGTACTTGGCCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SYRIRRMAATISTLL*GLGTSRLPTYLASK
Trigger: CTTTGAGGCCAAGTACGTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGGCTGCCATGCGCCGGATACGGTATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp TCTTCCTGGCCATCTGCATTCTGCTGCGTGTGCTGCAGGCTCAGCTaGTGGCAGACCTCAAAGGCCTGCCCCACCGTCCGAACGATTCTC +
Preference number: 6 (lower is better)
Translates to: SSWPSAFCCVCCRLS*WQTSKACPTVRTIL
Trigger: GAGAATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 72 bp CGTCCAGGCTTCCTACGTACTTGGCCTCAAAGCAGATaGCGTGCTGGAAGGCGTCCTCGTTGTGCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: RPGFLRTWPQSR*RAGRRPRCARG
Trigger: TCCCCTTGCACAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCAAGTACGTAGGAAGCCTGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 72 bp TGCTGCAGGCTCAGCTTGTGGCAGACCTCAAAGGCCTaGCCCACCGTCCGAACGATTCTCATAGCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: CCRLSLWQTSKA*PTVRTILIAWL
Trigger: GAGCCAAGCTATGAGAATCGTTCGGACGGTGGGGCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 72 bp CCATCTTCCTGGCCATCTGCATTCTGCTGCGTGTGCTaGAGGCTCAGCTTGTGGCAGACCTCAAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: PSSWPSAFCCVC*RLSLWQTSKAC
Trigger: GCAGGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGAAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 72 bp CTTCCTACGTACTTGGCCTCAAAGCAGATGCCGTGCTaGAAGGCGTCCTCGTTGTGCAAGGGGATCCGCAGG +
Preference number: 6 (lower is better)
Translates to: LPTYLASKQMPC*KASSLCKGIRR
Trigger: CCTGCGGATCCCCTTGCACAACGAGGACGCCTTCCAGCACGGCATCTGCTTTGAGGCCAAGTACGTAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 72 bp CATGGCAGCCACGATCTCCACCCTGCTGTTGGGCCTTaGCACGTCCAGGCTTCCTACGTACTTGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: HGSHDLHPAVGP*HVQASYVLGLK
Trigger: TTTGAGGCCAAGTACGTAGGAAGCCTGGACGTGCCAAGGCCCAACAGCAGGGTGGAGATCGTGGCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp AGGTCGTGCCCATCGTCCACAAGGTTGTACTTGGTTTaGCTAGGCATGGTTACCCGCGGCGGACCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: RSCPSSTRLYLV*LGMVTRGGPAP
Trigger: AGGAGCGGGTCCGCCGCGGGTAACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp ATCCGCAGGTCGTGCCCATCGTCCACAAGGTTGTACTaGGTTTTGCTAGGCATGGTTACCCGCGGCGGACCC +
Preference number: 6 (lower is better)
Translates to: IRRSCPSSTRLY*VLLGMVTRGGP
Trigger: GGGTCCGCCGCGGGTAACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp GCTGAACATTTAGAGGTTCCTGGAGGGTGGTGCACGTaGGGAGGGCATGGGAGCTCTGCCACCCTTCCCACA +
Preference number: 6 (lower is better)
Translates to: AEHLEVPGGWCT*GGHGSSATLPT
Trigger: TGTGGGAAGGGTGGCAGAGCTCCCATGCCCTCCCAACGTGCACCACCCTCCAGGAACCTCTAAATGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp GTGGCTGCCTCCCTCTTGCCCAGATTGGAGGCCCTGACCTTGCCGTaGACCCTATTTCTGATTGAGTGGAGCCACAGGGGCATAATGCCT +
Preference number: 6 (lower is better)
Translates to: VAASLLPRLEALTLP*TLFLIEWSHRGIMP
Trigger: AGGCATTATGCCCCTGTGGCTCCACTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAATCTGGGCAAGAGGGAGGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp GATACCGTGGCTGCCTCCCTCTTGCCCAGATTGGAGGCCCTGACCTaGCCGTTGACCCTATTTCTGATTGAGTGGAGCCACAGGGGCATA +
Preference number: 6 (lower is better)
Translates to: DTVAASLLPRLEALT*PLTLFLIEWSHRGI
Trigger: TATGCCCCTGTGGCTCCACTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAATCTGGGCAAGAGGGAGGCAGCCACGGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 72 bp CTCAAAAGGACTGGGTGTGGGGAGCTGCCGGGCAGCTaGACATTTAGAGGTTCCTGGAGGGTGGTGCACGTT +
Preference number: 6 (lower is better)
Translates to: LKRTGCGELPGS*TFRGSWRVVHV
Trigger: AACGTGCACCACCCTCCAGGAACCTCTAAATGTTCAGCTGCCCGGCAGCTCCCCACACCCAGTCCTTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 72 bp TCTCCATCTTCCTGGCCATCTGCATTCTGCTGCGTGTaGTGCAGGCTCAGCTTGTGGCAGACCTCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: SPSSWPSAFCCV*CRLSLWQTSKA
Trigger: GGCCTTTGAGGTCTGCCACAAGCTGAGCCTGCAGCACACGCAGCAGAATGCAGATGGCCAGGAAGATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp AAGGGGATCCGCAGGTCGTGCCCATCGTCCACAAGGTaGTACTTGGTTTTGCTAGGCATGGTTACCCGCGGC +
Preference number: 6 (lower is better)
Translates to: KGIRRSCPSSTR*YLVLLGMVTRG
Trigger: GCCGCGGGTAACCATGCCTAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp TCCCTCTTGCCCAGATTGGAGGCCCTGACCTTGCCGTaGACCCTATTTCTGATTGAGTGGAGCCACAGGGGC +
Preference number: 6 (lower is better)
Translates to: SLLPRLEALTLP*TLFLIEWSHRG
Trigger: GCCCCTGTGGCTCCACTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAATCTGGGCAAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp ACCTCGGCTGAATTCCAGGACATCATTCCCTGGAAGTaGGACCTCCACCGCATCGATGTCAGTCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: TSAEFQDIIPWK*DLHRIDVSLLC
Trigger: GCAGAGGAGACTGACATCGATGCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTGGAATTCAGCCGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CCA 72 bp TCATTCCAGAGGAGGAGCCAAAAGGAGTGGGTTCACTaGCACTGCGAAGCTGTGTGTCCTAAGGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: SFQRRSQKEWVH*HCEAVCPKGGP
Trigger: TGGCCCTCCCTTAGGACACACAGCTTCGCAGTGCCAGTGAACCCACTCCTTTTGGCTCCTCCTCTGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 72 bp CCAGGACCACCTGGTAGGGGTCAAACATTTGCTGACTaGTTCATGAGAGGGCCTCCTCCAACCAGCCCAGAA +
Preference number: 6 (lower is better)
Translates to: PGPPGRGQTFAD*FMRGPPPTSPE
Trigger: TTCTGGGCTGGTTGGAGGAGGCCCTCTCATGAATCAGTCAGCAAATGTTTGACCCCTACCAGGTGGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 72 bp AAGGCGTCCTCGTTGTGCAAGGGGATCCGCAGGTCGTaGCCATCGTCCACAAGGTTGTACTTGGTTTTGCTA +
Preference number: 6 (lower is better)
Translates to: KASSLCKGIRRS*PSSTRLYLVLL
Trigger: TAGCAAAACCAAGTACAACCTTGTGGACGATGGGCACGACCTGCGGATCCCCTTGCACAACGAGGACGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS GCA 72 bp CACATGGAAATGGCAGTGGAGAGAACCAGAGCAATTTaGCCCACCACACACTGGGCCACAGCCACTTGTGTC +
Preference number: 6 (lower is better)
Translates to: HMEMAVERTRAI*PTTHWATATCV
Trigger: GACACAAGTGGCTGTGGCCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTCTCCACTGCCATTTCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430120.3
CDS CCA 72 bp AGTCACACCTCGGCTGAATTCCAGGACATCATTCCCTaGAAGTGGGACCTCCACCGCATCGATGTCAGTCTC +
Preference number: 6 (lower is better)
Translates to: SHTSAEFQDIIP*KWDLHRIDVSL
Trigger: GAGACTGACATCGATGCGGTGGAGGTCCCACTTCCAGGGAATGATGTCCTGGAATTCAGCCGAGGTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 90 bp AGCACTCAGAGAATTACACTTGTGGATACCGTGGCTGCCTCCCTCTaGCCCAGATTGGAGGCCCTGACCTTGCCGTTGACCCTATTTCTG +
Preference number: 6 (lower is better)
Translates to: STQRITLVDTVAASL*PRLEALTLPLTLFL
Trigger: CAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAATCTGGGCAAGAGGGAGGCAGCCACGGTATCCACAAGTGTAATTCTCTGAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp GAGAGGGCCTCCTCCAACCAGCCCAGAAGGGCTGAGGTGAACAATTaGTGGCACCCTCATCAGTTTCCAACCTTCTTAAGGCAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: ERASSNQPRRAEVNN*WHPHQFPTFLRQSS
Trigger: ACTGCTCTGCCTTAAGAAGGTTGGAAACTGATGAGGGTGCCACAAATTGTTCACCTCAGCCCTTCTGGGCTGGTTGGAGGAGGCCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp CTGGGCTTATCATTCCAGAGGAGGAGCCAAAAGGAGTaGGTTCACTGGCACTGCGAAGCTGTGTGTCCTAAG +
Preference number: 6 (lower is better)
Translates to: LGLSFQRRSQKE*VHWHCEAVCPK
Trigger: CTTAGGACACACAGCTTCGCAGTGCCAGTGAACCCACTCCTTTTGGCTCCTCCTCTGGAATGATAAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp AGAGAAGAGAGGGACATGAATGCACATGAGAGTCACTaGCAGATGGCCGGGACCAGAGATGCCCTCCACATT +
Preference number: 6 (lower is better)
Translates to: REERDMNAHESH*QMAGTRDALHI
Trigger: AATGTGGAGGGCATCTCTGGTCCCGGCCATCTGCCAGTGACTCTCATGTGCATTCATGTCCCTCTCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp GCACATGGAAATGGCAGTGGAGAGAACCAGAGCAATTaGCCCCACCACACACTGGACACAGAAGCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: AHGNGSGENQSN*PHHTLDTEAEA
Trigger: TGCCTCTGCTTCTGTGTCCAGTGTGTGGTGGGGCAAATTGCTCTGGTTCTCTCCACTGCCATTTCCATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464284.1
CDS CAA 90 bp AGAATTACACTTGTGGATACCGTGGCTGCCTCCCTCTTGCCCAGATaGGAGGCCCTGACCTTGCCGTTGACCCTATTTCTGATTGAGTGG +
Preference number: 6 (lower is better)
Translates to: RITLVDTVAASLLPR*EALTLPLTLFLIEW
Trigger: CCACTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGCCTCCAATCTGGGCAAGAGGGAGGCAGCCACGGTATCCACAAGTGTAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp TTCAAGAAGAAGCCCTTCACGGGCAGCATGGGCATCTaGGCTTATCATTCCAGAGGAGGAGCCAAAAGGAGT +
Preference number: 6 (lower is better)
Translates to: FKKKPFTGSMGI*AYHSRGGAKRS
Trigger: ACTCCTTTTGGCTCCTCCTCTGGAATGATAAGCCCAGATGCCCATGCTGCCCGTGAAGGGCTTCTTCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp AAGGCAGAGCAGTTGGCAGCAATGCATTCAGCATGCTaGAGGCCCAGTGGTGTCAACAGCTCTGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: KAEQLAAMHSAC*RPSGVNSSVLG
Trigger: ACCAAGAACAGAGCTGTTGACACCACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp TTTGTGGCACCCTCATCAGTTTCCAACCTTCTTAAGGCAGAGCAGTaGGCAGCAATGCATTCAGCATGCTTGAGGCCCAGTGGTGTCAAC +
Preference number: 6 (lower is better)
Translates to: FVAPSSVSNLLKAEQ*AAMHSACLRPSGVN
Trigger: GTTGACACCACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAGAAGGTTGGAAACTGATGAGGGTGCCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp TCCCTGCTTAGAGAACTCCTTCAGCACCTAGCATGGCATGCCATGTaGGAGGTGGAAGGGGGCACTCTCTTCTCATCCTGTCTTCTAAAA +
Preference number: 6 (lower is better)
Translates to: SLLRELLQHLAWHAM*EVEGGTLFSSCLLK
Trigger: TTTTAGAAGACAGGATGAGAAGAGAGTGCCCCCTTCCACCTCCAACATGGCATGCCATGCTAGGTGCTGAAGGAGTTCTCTAAGCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 72 bp AGAGGACACTGTGTGCCCTCTGCAGAACTGCTTGCTTaGTTGGTGTGTGGGAAAAAGCCCCATACATTTGGT +
Preference number: 6 (lower is better)
Translates to: RGHCVPSAELLA*LVCGKKPHTFG
Trigger: ACCAAATGTATGGGGCTTTTTCCCACACACCAAGCAAGCAAGCAGTTCTGCAGAGGGCACACAGTGTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 72 bp CTTAAGGCAGAGCAGTTGGCAGCAATGCATTCAGCATaGTTGAGGCCCAGTGGTGTCAACAGCTCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: LKAEQLAAMHSA*LRPSGVNSSVL
Trigger: AAGAACAGAGCTGTTGACACCACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp TCCAACCAGCCCAGAAGGGCTGAGGTGAACAATTTGTaGCACCCTCATCAGTTTCCAACCTTCTTAAGGCAG +
Preference number: 6 (lower is better)
Translates to: SNQPRRAEVNNL*HPHQFPTFLRQ
Trigger: CTGCCTTAAGAAGGTTGGAAACTGATGAGGGTGCCACAAATTGTTCACCTCAGCCCTTCTGGGCTGGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp GAGTTAGAGGACACTGTGTGCCCTCTGCAGAACTGCTaGCTTGCTTGGTGTGTGGGAAAAAGCCCCATACAT +
Preference number: 6 (lower is better)
Translates to: ELEDTVCPLQNC*LAWCVGKSPIH
Trigger: ATGTATGGGGCTTTTTCCCACACACCAAGCAAGCAAGCAGTTCTGCAGAGGGCACACAGTGTCCTCTAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp CCCTCATCAGTTTCCAACCTTCTTAAGGCAGAGCAGTaGGCAGCAATGCATTCAGCATGCTTGAGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: PSSVSNLLKAEQ*AAMHSACLRPS
Trigger: ACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAGAAGGTTGGAAACTGATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp TCCTCCAACCAGCCCAGAAGGGCTGAGGTGAACAATTaGTGGCACCCTCATCAGTTTCCAACCTTCTTAAGG +
Preference number: 6 (lower is better)
Translates to: SSNQPRRAEVNN*WHPHQFPTFLR
Trigger: CCTTAAGAAGGTTGGAAACTGATGAGGGTGCCACAAATTGTTCACCTCAGCCCTTCTGGGCTGGTTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp AACCTTCTTAAGGCAGAGCAGTTGGCAGCAATGCATTCAGCATGCTaGAGGCCCAGTGGTGTCAACAGCTCTGTTCTTGGTGAGCAATAC +
Preference number: 6 (lower is better)
Translates to: NLLKAEQLAAMHSAC*RPSGVNSSVLGEQY
Trigger: GTATTGCTCACCAAGAACAGAGCTGTTGACACCACTGGGCCTCAAGCATGCTGAATGCATTGCTGCCAACTGCTCTGCCTTAAGAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp GCCCTGACCTTGCCGTTGACCCTATTTCTGATTGAGTaGAGCCACAGGGGCATAATGCCTAAGGAATTTAAA +
Preference number: 6 (lower is better)
Translates to: ALTLPLTLFLIE*SHRGIMPKEFK
Trigger: TTTAAATTCCTTAGGCATTATGCCCCTGTGGCTCCACTCAATCAGAAATAGGGTCAACGGCAAGGTCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 90 bp ATTGCTGGCACCATCTCGAGCGATATAGCTGAAGATCTTCAAGTCTaGGGAATCATGAGAGACATAGAAGATCCTGTAGATGGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: IAGTISSDIAEDLQV*GIMRDIEDPVDGVL
Trigger: CAGGACCCCATCTACAGGATCTTCTATGTCTCTCATGATTCCCAAGACTTGAAGATCTTCAGCTATATCGCTCGAGATGGTGCCAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS TCA 72 bp GGTGTAGGTGACAAACTATTACTTGTGATTGGTGTCTaGAATGGGGGAAAGTCTTGTGGGATTGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: GVGDKLLLVIGV*NGGKSCGIEPS
Trigger: TGAGGGCTCAATCCCACAAGACTTTCCCCCATTTCAGACACCAATCACAAGTAATAGTTTGTCACCTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS GCA 72 bp CCAGTAAATGTAGGTGTTTTCCTGAGTTCTGTCAGTTaGTCTAGCAAATCAGTTGAGTCCAAGGAGAGGGTA +
Preference number: 6 (lower is better)
Translates to: PVNVGVFLSSVS*SSKSVESKERV
Trigger: TACCCTCTCCTTGGACTCAACTGATTTGCTAGAGCAACTGACAGAACTCAGGAAAACACCTACATTTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp AAGGAGAGGGTAGTGGGAACACCAATTTATAGCCACTaGGTCAGAGGTGTAGGTGACAAACTATTACTTGTG +
Preference number: 6 (lower is better)
Translates to: KERVVGTPIYSH*VRGVGDKLLLV
Trigger: CACAAGTAATAGTTTGTCACCTACACCTCTGACCAAGTGGCTATAAATTGGTGTTCCCACTACCCTCTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 72 bp AAGTCTTGTGGGATTGAGCCCTCAAACTGTGGGATCTaGTGCTGTTTCCAGGTAGATAGTATCAGAATCAAA +
Preference number: 6 (lower is better)
Translates to: KSCGIEPSNCGI*CCFQVDSIRIK
Trigger: TTTGATTCTGATACTATCTACCTGGAAACAGCATCAGATCCCACAGTTTGAGGGCTCAATCCCACAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CCA 72 bp CTTCCCACAGACCCTGCCCTATGCATCTCTTCCATCTaGTGTTCATTGGTATCCCTTATAATATCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: LPTDPALCISSI*CSLVSLIISFK
Trigger: TTTAAAGGATATTATAAGGGATACCAATGAACACCAGATGGAAGAGATGCATAGGGCAGGGTCTGTGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS CAA 72 bp GAAACCATAATGCTCACTTTCTTCTTCTTGATGTTCTaGGCTTTAAACTCATACCGTATCCGGCGCATGGCA +
Preference number: 6 (lower is better)
Translates to: ETIMLTFFFLMF*ALNSYRIRRMA
Trigger: TGCCATGCGCCGGATACGGTATGAGTTTAAAGCCAAGAACATCAAGAAGAAGAAAGTGAGCATTATGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp ACCATCTCGAGCGATATAGCTGAAGATCTTCAAGTCTaGGGAATCATGAGAGACATAGAAGATCCTGTAGAT +
Preference number: 6 (lower is better)
Translates to: TISSDIAEDLQV*GIMRDIEDPVD
Trigger: ATCTACAGGATCTTCTATGTCTCTCATGATTCCCAAGACTTGAAGATCTTCAGCTATATCGCTCGAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5
CDS CAA 72 bp GACCCTGCCCTATGCATCTCTTCCATCTGGTGTTCATaGGTATCCCTTATAATATCCTTTAAAATAAACCAG +
Preference number: 6 (lower is better)
Translates to: DPALCISSIWCS*VSLIISFKINQ
Trigger: CTGGTTTATTTTAAAGGATATTATAAGGGATACCAATGAACACCAGATGGAAGAGATGCATAGGGCAGGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493151.1
CDS TCA 72 bp TTTCTTCTTCTTCAGAATCACTTTCACTCCATCCACTaGAACCATAATGCTCACTTTCTTCTTCTTGATGTT +
Preference number: 6 (lower is better)
Translates to: FLLLQNHFHSIH*NHNAHFLLLDV
Trigger: AACATCAAGAAGAAGAAAGTGAGCATTATGGTTTCAGTGGATGGAGTGAAAGTGATTCTGAAGAAGAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361897.10
ENST00000430120.3
ENST00000530878.5