RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000089250

Ensembl transcript IDs: ENST00000317775.11, ENST00000338101.8, ENST00000344089.4, ENST00000477584.1, ENST00000549189.1, ENST00000618760.4

Found 1405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAAGGCAGGGGAGATTATAGCTGGCATGAAGTCAAGCTCCATGTaGCAGGAACAGGACACCGGTGGGGGCTGCCAGGGATGGCAGAGC +
Preference number: 1 (lower is better)
Translates to: RKAGEIIAGMKSSSM*QEQDTGGGCQGWQS
Trigger: GCTCTGCCATCCCTGGCAGCCCCCACCGGTGTCCTGTTCCTGCCACATGGAGCTTGACTTCATGCCAGCTATAATCTCCCCTGCCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp GCATGCGACAAACACAGCCTGGACAACCTCGCAAAGAGCGTGGGGTaGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTT +
Preference number: 1 (lower is better)
Translates to: ACDKHSLDNLAKSVG*ASVLQGRCWSTGTL
Trigger: AAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACGCTCTTTGCGAGGTTGTCCAGGCTGTGTTTGTCGCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp GAAGAGCATGCGACAAACACAGCCTGGACAACCTCGCAAAGAGCGTaGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGA +
Preference number: 1 (lower is better)
Translates to: EEHATNTAWTTSQRA*GGRQSFKEGAGAQG
Trigger: TCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACGCTCTTTGCGAGGTTGTCCAGGCTGTGTTTGTCGCATGCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp AAACCCCCACAGCGACGGCCATGTTCCAGTGGTTTCATGCACCCGTaGGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAACAGAGTTTTG +
Preference number: 1 (lower is better)
Translates to: KPPQRRPCSSGFMHP*VALVGKRGSGNRVL
Trigger: CAAAACTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTCGCTGTGGGGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp GCTGGGGGTCAGTTTTCCCTCCGGGCATCTGGGCATGGCTGGACTTaGGAAGGATTCACCCTGTTGACTCCAGAGAAGCTGACTATCACA +
Preference number: 1 (lower is better)
Translates to: AGGQFSLRASGHGWT*EGFTLLTPEKLTIT
Trigger: TGTGATAGTCAGCTTCTCTGGAGTCAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCAGATGCCCGGAGGGAAAACTGACCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp ATGTCTACTGGCTGGGGGTCAGTTTTCCCTCCGGGCATCTGGGCATaGCTGGACTTGGGAAGGATTCACCCTGTTGACTCCAGAGAAGCT +
Preference number: 1 (lower is better)
Translates to: MSTGWGSVFPPGIWA*LDLGRIHPVDSREA
Trigger: AGCTTCTCTGGAGTCAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCAGATGCCCGGAGGGAAAACTGACCCCCAGCCAGTAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp CCCACAGCGACGGCCATGTTCCAGTGGTTTCATGCACCCGTGAGTTaGCCTTGTCGGCAAGAGAGGGAGTGGGAACAGAGTTTTGTAAGA +
Preference number: 1 (lower is better)
Translates to: PTATAMFQWFHAPVS*PCRQEREWEQSFVR
Trigger: TCTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTCGCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp GCCTGGATGAAAAGCCACCACGAGAGGGCAGTATTTCCCCACCCTTaGTCTGAGCCTAACAATCTGGACTCCACTCTGGTCCTTGAGAGG +
Preference number: 1 (lower is better)
Translates to: AWMKSHHERAVFPHP*SEPNNLDSTLVLER
Trigger: CCTCTCAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATACTGCCCTCTCGTGGTGGCTTTTCATCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp TGGGGTGCCCGGCACCGCTCTTTGGGCCTTCTGGAAAACCACTGCTaGGCCAGGAGTGTGAGTCTTAACAATCACAACGAGAACACAACA +
Preference number: 1 (lower is better)
Translates to: WGARHRSLGLLENHC*ARSVSLNNHNENTT
Trigger: TGTTGTGTTCTCGTTGTGATTGTTAAGACTCACACTCCTGGCTCAGCAGTGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp GCAGGACACTGCTACAGGTATCTTGTGGATGGAGGCCAGGAATGCTaGTCAGCTTCCTACAGTACCCAAGACGGCCCCCACAAGAAAGAA +
Preference number: 1 (lower is better)
Translates to: AGHCYRYLVDGGQEC*SASYSTQDGPHKKE
Trigger: TTCTTTCTTGTGGGGGCCGTCTTGGGTACTGTAGGAAGCTGAGCAGCATTCCTGGCCTCCATCCACAAGATACCTGTAGCAGTGTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp TTGGCAGGACACTGCTACAGGTATCTTGTGGATGGAGGCCAGGAATaGTGCTCAGCTTCCTACAGTACCCAAGACGGCCCCCACAAGAAA +
Preference number: 1 (lower is better)
Translates to: LAGHCYRYLVDGGQE*CSASYSTQDGPHKK
Trigger: TTTCTTGTGGGGGCCGTCTTGGGTACTGTAGGAAGCTGAGCAGCATTCCTGGCCTCCATCCACAAGATACCTGTAGCAGTGTCCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTaGCCCATCACACACACACACACACACACACACACACACACAGGC +
Preference number: 1 (lower is better)
Translates to: SKIDTLVQGRGRTET*PITHTHTHTHTHTG
Trigger: GCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp CATAGATTGCCTTTTCACTTTAACAGTCTCCTGGCCTGGGCCCTTTaGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCA +
Preference number: 1 (lower is better)
Translates to: HRLPFHFNSLLAWAL*GLGAPTVKPFQRGP
Trigger: TGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGCCCAGGCCAGGAGACTGTTAAAGTGAAAAGGCAATCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp GAGCAGGGGAAATTGGGATTAAAGGAAGGCAGGGGAGATTATAGCTaGCATGAAGTCAAGCTCCATGTGGCAGGAACAGGACACCGGTGG +
Preference number: 1 (lower is better)
Translates to: EQGKLGLKEGRGDYS*HEVKLHVAGTGHRW
Trigger: CCACCGGTGTCCTGTTCCTGCCACATGGAGCTTGACTTCATGCCAGCTATAATCTCCCCTGCCTTCCTTTAATCCCAATTTCCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp AAGCGTGTTTGGTCAGAAGATTCTGTGTTCTTAGCCAATGTCTACTaGCTGGGGGTCAGTTTTCCCTCCGGGCATCTGGGCATGGCTGGA +
Preference number: 1 (lower is better)
Translates to: KRVWSEDSVFLANVY*LGVSFPSGHLGMAG
Trigger: TCCAGCCATGCCCAGATGCCCGGAGGGAAAACTGACCCCCAGCCAGTAGACATTGGCTAAGAACACAGAATCTTCTGACCAAACACGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp AGGGTCTTCAATGAAAGCAGTGGCAATCTAAGATCGACACACTTGTaGAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACAC +
Preference number: 1 (lower is better)
Translates to: RVFNESSGNLRSTHL*REEDGQRPGPSHTH
Trigger: GTGTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGATTGCCACTGCTTTCATTGAAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp TGCCACCAGGCTTCTTTGAACAACATAACTTCCAGGCCCCTTGGATaGTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAGTC +
Preference number: 1 (lower is better)
Translates to: CHQASLNNITSRPLG*YCWRRGSVNGCGKV
Trigger: GACTTTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp CTCACCCTCCTCAGCCTTCCAAAGCCAGCCTCAATTTATCTTACATaGTCCCTGTCCGTGCCTTTCCTCTCACTCTTCCCAATTCCTGGA +
Preference number: 1 (lower is better)
Translates to: LTLLSLPKPASIYLT*SLSVPFLSLFPIPG
Trigger: TCCAGGAATTGGGAAGAGTGAGAGGAAAGGCACGGACAGGGAGCATGTAAGATAAATTGAGGCTGGCTTTGGAAGGCTGAGGAGGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp AAAAGACTACAGGAAGCAGTGCATGGAGGCAGATTTGTTCCCGCCTaGCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGAC +
Preference number: 1 (lower is better)
Translates to: KRLQEAVHGGRFVPA*QGHLVNNGLCFGPD
Trigger: GTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCTGCCTCCATGCACTGCTTCCTGTAGTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp ACGAGAGGGCAGTATTTCCCCACCCTTGATCTGAGCCTAACAATCTaGACTCCACTCTGGTCCTTGAGAGGTTACTCAACAGAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: TRGQYFPTLDLSLTI*TPLWSLRGYSTERE
Trigger: CTCTCTCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATACTGCCCTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp TCAGGAGACGTCTCATTCCTCCTGGCCAAACTCACTTTTGTGAAATaGGGCTGGAGCTGCTACTGGTCAATTCAGGGGGAAGAGGGAAAT +
Preference number: 1 (lower is better)
Translates to: SGDVSFLLAKLTFVK*GWSCYWSIQGEEGN
Trigger: ATTTCCCTCTTCCCCCTGAATTGACCAGTAGCAGCTCCAGCCCCATTTCACAAAAGTGAGTTTGGCCAGGAGGAATGAGACGTCTCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp CTCCTTTATTCTCACCCTCTACAATGGATGGGGTGCCAGGTACGCTaGTTCAGTTCCTGGAGTCTCTTTATCACTACATCCGCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: LLYSHPLQWMGCQVR*FSSWSLFITTSASS
Trigger: GGAAGAGGCGGATGTAGTGATAAAGAGACTCCAGGAACTGAATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGTGAGAATAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp GCTCAGGCATCTGGATTGCCCATCCTATTAGGACCATTTGCCCTATaGGCTAGGTCAGGACACCTCTCACTTGTTTTGAGCTTAGGGCAA +
Preference number: 1 (lower is better)
Translates to: AQASGLPILLGPFAL*ARSGHLSLVLSLGQ
Trigger: TTGCCCTAAGCTCAAAACAAGTGAGAGGTGTCCTGACCTAGCTCATAGGGCAAATGGTCCTAATAGGATGGGCAATCCAGATGCCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp GCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTaGGTGCTCCAGGAAATCTATAATGAGAAGTCCTGGGGTAGCCAG +
Preference number: 1 (lower is better)
Translates to: AADNGNNHWARQSFC*VLQEIYNEKSWGSQ
Trigger: CTGGCTACCCCAGGACTTCTCATTATAGATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp TTATTGCCACCAGGCTTCTTTGAACAACATAACTTCCAGGCCCCTTaGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAA +
Preference number: 1 (lower is better)
Translates to: LLPPGFFEQHNFQAP*MLLLEEGVSQWMWQ
Trigger: TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp AGAGATTCTCTTGACCCTGAAGTCCAAGAGAGGGGTGTTGCCCCCTaGGGACATTGGGCAATGTCTGATGACATACTTGATTGTTACCGT +
Preference number: 1 (lower is better)
Translates to: RDSLDPEVQERGVAP*GHWAMSDDILDCYR
Trigger: ACGGTAACAATCAAGTATGTCATCAGACATTGCCCAATGTCCCCAGGGGGCAACACCCCTCTCTTGGACTTCAGGGTCAAGAGAATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp GCCTTCCAAAGCCAGCCTCAATTTATCTTACATGCTCCCTGTCCGTaGCTTTCCTCTCACTCTTCCCAATTCCTGGACAACTCTTACCTT +
Preference number: 1 (lower is better)
Translates to: AFQSQPQFILHAPCP*LSSHSSQFLDNSYL
Trigger: AAGGTAAGAGTTGTCCAGGAATTGGGAAGAGTGAGAGGAAAGGCACGGACAGGGAGCATGTAAGATAAATTGAGGCTGGCTTTGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp CAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTaGTCCAGGAAATCTATAATGAGAAGTCCTGGGGTAGCCAGCAGA +
Preference number: 1 (lower is better)
Translates to: QIMETTTGLGKVSAA*SRKSIMRSPGVASR
Trigger: TCTGCTGGCTACCCCAGGACTTCTCATTATAGATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTaGTGCGTGCTCCAGGAAATCTATAATGAGAAGTCCTGGGGTAGC +
Preference number: 1 (lower is better)
Translates to: LAADNGNNHWARQSF*CVLQEIYNEKSWGS
Trigger: GCTACCCCAGGACTTCTCATTATAGATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp AAGTTCTTCCCACCCCAAGTTGTGGCTCCTATCGAAGAAGCCACGTaGGACCTCATTATGGCAACTCTTTCCAACCTCATCCACTTTAAC +
Preference number: 1 (lower is better)
Translates to: KFFPPQVVAPIEEAT*DLIMATLSNLIHFN
Trigger: GTTAAAGTGGATGAGGTTGGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAACTTGGGGTGGGAAGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp GTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTaGAAGTGTACCTGGGTCCTTACATTTGGGGAAGGGCAGCTTTTC +
Preference number: 1 (lower is better)
Translates to: VLIGNRLSTDTAFHG*KCTWVLTFGEGQLF
Trigger: GAAAAGCTGCCCTTCCCCAAATGTAAGGACCCAGGTACACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp GGATCCCTTCCCACCATTTACTCTGAGAGAGTAAATTCAACAGGTTaGCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGA +
Preference number: 1 (lower is better)
Translates to: GSLPTIYSERVNSTG*LLGRNYTGSNSYRR
Trigger: TCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTTGAATTTACTCTCTCAGAGTAAATGGTGGGAAGGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp CAAAAGAAGCCCTCTCTCCTCCCAAGGAGTTTAACATCATCTCTCTaGTCTTTCACGACACAAGCTGTGGGAACTGGATGCATAGTGATG +
Preference number: 1 (lower is better)
Translates to: QKKPSLLPRSLTSSL*SFTTQAVGTGCIVM
Trigger: CATCACTATGCATCCAGTTCCCACAGCTTGTGTCGTGAAAGAGCAGAGAGATGATGTTAAACTCCTTGGGAGGAGAGAGGGCTTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp AACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTaGCCGGTGCCTTCCACACACTGGAGAAGCAAGACATGTTATAAG +
Preference number: 1 (lower is better)
Translates to: NLLHERNCVLLISAN*PVPSTHWRSKTCYK
Trigger: CTTATAACATGTCTTGCTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp TATTTCCCCACCCTTGATCTGAGCCTAACAATCTGGACTCCACTCTaGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATC +
Preference number: 1 (lower is better)
Translates to: YFPTLDLSLTIWTPL*SLRGYSTEREAFGI
Trigger: GATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp GGCTGGAGCTGCTACTGGTCAATTCAGGGGGAAGAGGGAAATAAATaGGCCATAACCCGAATAACCCCCAAATATCTTGTCAACCCTATT +
Preference number: 1 (lower is better)
Translates to: GWSCYWSIQGEEGNK*AITRITPKYLVNPI
Trigger: AATAGGGTTGACAAGATATTTGGGGGTTATTCGGGTTATGGCCCATTTATTTCCCTCTTCCCCCTGAATTGACCAGTAGCAGCTCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp TTAATATGGGCCAGGGACACGTTTCTTGGCATTGAGGGTCTTCAATaGAAGCAGTGGCAATCTAAGATCGACACACTTGTGCAGGGAAGA +
Preference number: 1 (lower is better)
Translates to: LIWARDTFLGIEGLQ*KQWQSKIDTLVQGR
Trigger: TCTTCCCTGCACAAGTGTGTCGATCTTAGATTGCCACTGCTTTCATTGAAGACCCTCAATGCCAAGAAACGTGTCCCTGGCCCATATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp ACTAGAACAATTATGGGGCTTCCAAATGTTTCAGGTACATGGGCGTaGACCCTAATTATGGACACACGAGGGATTAATATGGGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: TRTIMGLPNVSGTWA*TLIMDTRGINMGQG
Trigger: TCCCTGGCCCATATTAATCCCTCGTGTGTCCATAATTAGGGTCCACGCCCATGTACCTGAAACATTTGGAAGCCCCATAATTGTTCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp ATGGCTTTGATAAGTATTAATAGGAAACAGACTCTCGACAGACACTaGTTTCCACGGGTGAAAGTGTACCTGGGTCCTTACATTTGGGGA +
Preference number: 1 (lower is better)
Translates to: MALISINRKQTLDRH*FPRVKVYLGPYIWG
Trigger: TCCCCAAATGTAAGGACCCAGGTACACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTATCAAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp CACAATCCATTGGATGGGTTCATGTCACATGAGGGCTCTGCTCACTaGTATCAAAATCTAAATGCAGCAAATTCTGGGAATGCCTCTTTC +
Preference number: 1 (lower is better)
Translates to: HNPLDGFMSHEGSAH*YQNLNAANSGNASF
Trigger: GAAAGAGGCATTCCCAGAATTTGCTGCATTTAGATTTTGATACCAGTGAGCAGAGCCCTCATGTGACATGAACCCATCCAATGGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp GCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTACAATGGATaGGGTGCCAGGTACGCTGATTCAGTTCCTGGAGTCTCTTTATCA +
Preference number: 1 (lower is better)
Translates to: ARCFNFSFILTLYNG*GARYADSVPGVSLS
Trigger: TGATAAAGAGACTCCAGGAACTGAATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp ATTTGGATGCAGGAGACTATGAAGGTTGGGGACAGCCAGAGAGTATaGATGGGTTATAAAGGAAGACTAGTTAGTGTTTCTCTCTCCTTG +
Preference number: 1 (lower is better)
Translates to: IWMQETMKVGDSQRV*MGYKGRLVSVSLSL
Trigger: CAAGGAGAGAGAAACACTAACTAGTCTTCCTTTATAACCCATTCATACTCTCTGGCTGTCCCCAACCTTCATAGTCTCCTGCATCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 90 bp CTCTGCTCACTGGTATCAAAATCTAAATGCAGCAAATTCTGGGAATaGCTCTTTCATTGGGAGACAGCCCCTTTAATCAATTTCCCACTC +
Preference number: 1 (lower is better)
Translates to: LCSLVSKSKCSKFWE*LFHWETAPLINFPL
Trigger: GAGTGGGAAATTGATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTCCCAGAATTTGCTGCATTTAGATTTTGATACCAGTGAGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp TTTCTAACTAGAACAATTATGGGGCTTCCAAATGTTTCAGGTACATaGGCGTGGACCCTAATTATGGACACACGAGGGATTAATATGGGC +
Preference number: 1 (lower is better)
Translates to: FLTRTIMGLPNVSGT*AWTLIMDTRGINMG
Trigger: GCCCATATTAATCCCTCGTGTGTCCATAATTAGGGTCCACGCCCATGTACCTGAAACATTTGGAAGCCCCATAATTGTTCTAGTTAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp TTTCAAAGAGGGCCAGTGCACTTCCTCTTTAGCAGACACCCAAACTaGACAACAAGATATGCCCACGTACAGTATATAAAAGAAATGTGG +
Preference number: 1 (lower is better)
Translates to: FQRGPVHFLFSRHPN*TTRYAHVQYIKEMW
Trigger: CCACATTTCTTTTATATACTGTACGTGGGCATATCTTGTTGTTCAGTTTGGGTGTCTGCTAAAGAGGAAGTGCACTGGCCCTCTTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 90 bp TATTCCCTGATGGAAAAGCATTCCTGCATAAAGCTTGACTTGGAGTaGGAAGCACTGATCAATTTGTCTTTAATGGGGATTGGACACAAC +
Preference number: 1 (lower is better)
Translates to: YSLMEKHSCIKLDLE*EALINLSLMGIGHN
Trigger: GTTGTGTCCAATCCCCATTAAAGACAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCATCAGGGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp TCTAAGTATTTATTCCCTGATGGAAAAGCATTCCTGCATAAAGCTTaGCTTGGAGTGGGAAGCACTGATCAATTTGTCTTTAATGGGGAT +
Preference number: 1 (lower is better)
Translates to: SKYLFPDGKAFLHKA*LGVGSTDQFVFNGD
Trigger: ATCCCCATTAAAGACAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCATCAGGGAATAAATACTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp ATGAATCCTGGTTTTATAATCATTTCTTTGGACTCCTTGACAAAATaGGACAATGTTTCCATCTGTCTGCTACTAGAAAGGCAGGCACAT +
Preference number: 1 (lower is better)
Translates to: MNPGFIIISLDSLTK*DNVSICLLLERQAH
Trigger: ATGTGCCTGCCTTTCTAGTAGCAGACAGATGGAAACATTGTCTCATTTTGTCAAGGAGTCCAAAGAAATGATTATAAAACCAGGATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 90 bp AGAACAAAACAAACTCATATAAACATACTAAGGCATATTGACAGCTaGCCACCTCCCTCGCACATGGCTTTGATAAGTATTAATAGGAAA +
Preference number: 1 (lower is better)
Translates to: RTKQTHINILRHIDS*PPPSHMALISINRK
Trigger: TTTCCTATTAATACTTATCAAAGCCATGTGCGAGGGAGGTGGTCAGCTGTCAATATGCCTTAGTATGTTTATATGAGTTTGTTTTGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCACTGCGACGTGGGGTaGCCGGCACCGCTCTTTGGG +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWHCDVG*PAPLFG
Trigger: CCCAAAGAGCGGTGCCGGGCACCCCACGTCGCAGTG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGGCCGAGGAAACCACTaGGGGGCGAGAAGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: PVVSCTRELPLSAREGVGGRGNH*GARSPR
Trigger: CCTCGGGCTTCTCGCCCCTCAGTGGTTTCCTCGGCC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCCTCTCCCCACGGTCTaGTCCCAGCCCACCTTTTCT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWPLPTV*SQPTFS
Trigger: AGAAAAGGTGGGCTGGGACCAGACCGTGGGGAGAGG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGCTTTGAGGACATGGTaGCCACAGCGGCATGCTGGG +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWALRTW*PQRHAG
Trigger: CCCAGCATGCCGCTGTGGCCACCATGTCCTCAAAGC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGGGGGAGGCAGAGGATaGAGTGAGCTGAGATCGTAC +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWGGGRG*SELRSY
Trigger: GTACGATCTCAGCTCACTGCATCCTCTGCCTCCCCC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAGGGGTGTTGCCCCCTaGGGACATTGGGCAATGTCT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWRGVAP*GHWAMS
Trigger: AGACATTGCCCAATGTCCCCAGGGGGCAACACCCCT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGGATGCAGGAGACTATaGAGGTTGGGGACAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWGCRRL*RLGTAR
Trigger: TCTGGCTGTCCCCAACCTTCATAGTCTCCTGCATCC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACCGCGCTTACAAAACTTaGAGCCGGCTGGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHRAYKT*SRLGKR
Trigger: CCTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCG...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGACGGCCATGTTCCAGTaGTTTCATGCACCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWTAMFQ*FHAPVS
Trigger: ACTCACGGGTGCATGAAACCACTGGAACATGGCCGT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGGGACCCTGCAGTCTaGGAGGCCACTAGGATTTCT +
Preference number: 2 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGDPAV*EATRIS
Trigger: AGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp GGCTGGGGGTCAGTTTTCCCTCCGGGCATCTGGGCATGGCTGGACTaGGGAAGGATTCACCCTGTTGACTCCAGAGAAGCTGACTATCAC +
Preference number: 2 (lower is better)
Translates to: GWGSVFPPGIWAWLD*GRIHPVDSREADYH
Trigger: GTGATAGTCAGCTTCTCTGGAGTCAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCAGATGCCCGGAGGGAAAACTGACCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGGCCGAGGAAACCACTaGGGGGCGAGAAGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVGRGNH*GARSPR
Trigger: CCTCGGGCTTCTCGCCCCTCAGTGGTTTCCTCGGCC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAGAGGGCAACAAGCCTaGGGGACAAGTTCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVRGQQA*GTSSSH
Trigger: GTGGGAAGAACTTGTCCCTCAGGCTTGTTGCCCTCT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAGATTTGTTCCCGCCTaGCAGGGCCATCTCGTTAAT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWRFVPA*QGHLVN
Trigger: ATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCTTGGATGCTATTGCTaGAGGAGGGGGTCAGTCAAT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWLGCYC*RRGSVN
Trigger: ATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTTCCCTTTCCATCCTTaGGGACCCTGCAGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVFPFHP*GPCSLG
Trigger: TCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp CCCCACAGCGACGGCCATGTTCCAGTGGTTTCATGCACCCGTGAGTaGCCCTTGTCGGCAAGAGAGGGAGTGGGAACAGAGTTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: PHSDGHVPVVSCTRE*PLSAREGVGTEFCK
Trigger: CTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTCGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp GGTTGGCCTCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTaGACTCCCTGGGAGGCAGGCCCCTTCCCTCAGACCCTCAGACCT +
Preference number: 2 (lower is better)
Translates to: GWPPKSNPCSWGTSM*TPWEAGPFPQTLRP
Trigger: AGGTCTGAGGGTCTGAGGGAAGGGGCCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGAGGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp TTGTTCCCGCCTGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTaGGGCCAGACGGGCATAGCCCCGCTTGACCAGAACTGTTTGGGT +
Preference number: 2 (lower is better)
Translates to: LFPPARAISLITDCV*GQTGIAPLDQNCLG
Trigger: ACCCAAACAGTTCTGGTCAAGCGGGGCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCAGGCGGGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTTCAAAGAGGGCCAGTaGACTTCCTCTTTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWFKEGQ*TSSLAD
Trigger: GTCTGCTAAAGAGGAAGTGCACTGGCCCTCTTTGAA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGATCGAAGAAGCCACGTaGGACCTCATTATGGCAACT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWIEEAT*DLIMAT
Trigger: AGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGAT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCAAAAGAAAGACACCTaGCTGTCTCACTCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWQKKDT*LSHSRE
Trigger: TTCCCTGGAGTGAGACAGCCAGGTGTCTTTCTTTTG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp AGCGACGGCCATGTTCCAGTGGTTTCATGCACCCGTGAGTTGCCCTaGTCGGCAAGAGAGGGAGTGGGAACAGAGTTTTGTAAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: SDGHVPVVSCTRELP*SAREGVGTEFCKSH
Trigger: GTGGCTCTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGAGAGGGCAACAAGCCTaGGGGACAAGTTCTTCCCAC +
Preference number: 2 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWRGQQA*GTSSSH
Trigger: GTGGGAAGAACTTGTCCCTCAGGCTTGTTGCCCTCT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGCTACGAGGCCTGGATaGAAAGCCACCACGAGAGGG +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCATRPG*KATTRG
Trigger: CCCTCTCGTGGTGGCTTTTCATCCAGGCCTCGTAGC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTCCAAAGTCATCCAGTaGCAAAGTGGGAAGATCCTT +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSKVIQ*QSGKIL
Trigger: AAGGATCTTCCCACTTTGCCACTGGATGACTTTGGA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCCAATGTCTACTGGCTaGGGGTCAGTTTTCCCTCCG +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSPMSTG*GSVFPP
Trigger: CGGAGGGAAAACTGACCCCCAGCCAGTAGACATTGG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGGTTTCATGCACCCGTaGGTTGCCCTTGTCGGCAAG +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCGFMHP*VALVGK
Trigger: CTTGCCGACAAGGGCAACTCACGGGTGCATGAAACC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGGCTCAGAGAGCTTGTaGCTAGTTCCTGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWGSESL*LVPAAF
Trigger: AAAGGCTGCAGGAACTAGGCACAAGCTCTCTGAGCC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAGATCGACACACTTGTaGAGGGAAGAGGACGGACAG +
Preference number: 2 (lower is better)
Translates to: VEPAEHSLSILGDPAVWERSTHL*REEDGQ
Trigger: CTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTCCAGGCCCCTTGGATaGTATTGCTGGAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRSRPLG*YCWRRG
Trigger: CCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGACGGCCATGTTCCAGTaGTTTCATGCACCCGTGAGT +
Preference number: 2 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWTAMFQ*FHAPVS
Trigger: ACTCACGGGTGCATGAAACCACTGGAACATGGCCGT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGGACGGACAGAGACCTaGCCCATCACACACACACAC +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCGRTET*PITHTH
Trigger: GTGTGTGTGTGTGATGGGCCAGGTCTCTGTCCGTCC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGGGGACCCTGCAGTCTaGGAGGCCACTAGGATTTCT +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCGDPAV*EATRIS
Trigger: AGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGTAATCCAGCACTTTaGGAGGCTGAGGTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSCNPAL*EAEVRG
Trigger: TCCACGCACCTCAGCCTCCCAAAGTGCTGGATTACA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGGCACTTCGATGTCCTaGAGTTACTTTCTAAAAGAC +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWGTSMS*SYFLKD
Trigger: GTCTTTTAGAAAGTAACTCCAGGACATCGAAGTGCC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCTCCACTCTGGTCCTTaGGAGGTTACTCAACAGAGA +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSLHSGP*EVTQQR
Trigger: TCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCCAGAAGCTACCAGTaGAATCCCGCCCATTTCTCA +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSRSYQ*NPAHFS
Trigger: TGAGAAATGGGCGGGATTTCACTGGTAGCTTCTGGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCGCGCTTACAAAACTTaGAGCCGGCTGGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRRAYKT*SRLGKR
Trigger: CCTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCCTTTGGGGTCTTGGTaGCCCCACTGTAAAGCCCTT +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCPLGSW*PHCKAL
Trigger: AAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCAGTGGCTGAGGGACTaGCTCAGAGAGCTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: NRLPLREELHRLQFLPKTQWLRD*LRELVP
Trigger: AGGCACAAGCTCTCTGAGCCAGTCCCTCAGCCACTG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAAATGCAGCAAATTCTaGGAATGCCTCTTTCATTGG +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWKCSKF*ECLFHW
Trigger: CCAATGAAAGAGGCATTCCCAGAATTTGCTGCATTT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGTCAGTCAATGGATGTaGCAAAGTCAAGTGATTCTA +
Preference number: 2 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWVSQWM*QSQVIL
Trigger: TAGAATCACTTGACTTTGCCACATCCATTGACTGAC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCCTTCCCTGGGGAATTaGGGAGGCGTCTCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVPSLGN*GGVSKA
Trigger: AGCTTTGGAGACGCCTCCCCAATTCCCCAGGGAAGG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCCTGCCTTCTAGCCTaGAGTTGTGAAGCAGCTTGT +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSCLLA*SCEAAC
Trigger: ACAAGCTGCTTCACAACTCCAGGCTAGAAGGCAGGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGGAGACTATGAAGGTTaGGGACAGCCAGAGAGTATG +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSGDYEG*GQPESM
Trigger: CATACTCTCTGGCTGTCCCCAACCTTCATAGTCTCC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp CTCCGGGCATCTGGGCATGGCTGGACTTGGGAAGGATTCACCCTGTaGACTCCAGAGAAGCTGACTATCACATCAGCTCTGAAAACTCAT +
Preference number: 2 (lower is better)
Translates to: LRASGHGWTWEGFTL*TPEKLTITSALKTH
Trigger: ATGAGTTTTCAGAGCTGATGTGATAGTCAGCTTCTCTGGAGTCAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCAGATGCCCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp GCCAAGGATAGGGAGTGTGAGATAAAGGGCAGAGGCCAGGCCAGGTaGGCCTCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTT +
Preference number: 2 (lower is better)
Translates to: AKDRECEIKGRGQAR*ASKVKSLFMGNIYV
Trigger: AACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGAGGCCAACCTGGCCTGGCCTCTGCCCTTTATCTCACACTCCCTATCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTTTCATCCCCAAGGGTaGAGCAGCAAGCCCGCTTTG +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLFHPQG*SSKPAL
Trigger: CAAAGCGGGCTTGCTGCTTCACCCTTGGGGATGAAA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAGCAGACACCCAAACTaGACAACAAGATATGCCCAC +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSRHPN*TTRYAH
Trigger: GTGGGCATATCTTGTTGTTCAGTTTGGGTGTCTGCT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGACAGACAGAAGGCTTTaGGGACATGGTGGCCACAGC +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRTDRRL*GHGGHS
Trigger: GCTGTGGCCACCATGTCCTCAAAGCCTTCTGTCTGT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCTTGTGCCTAGTTCCTaGAGCCTTTCCAGGGGAACC +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLLVPSS*SLSRGT
Trigger: GGTTCCCCTGGAAAGGCTGCAGGAACTAGGCACAAG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCAGATCGACACACTTGTaGAGGGAAGAGGACGGACAG +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCRSTHL*REEDGQ
Trigger: CTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCCACTCCTCTCCCCATaGCCTGAACCCTTTCTAACT +
Preference number: 2 (lower is better)
Translates to: VVAPIEEATWDLIMATLSPLLSP*PEPFLT
Trigger: AGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCCACTCCTCTCCCCATaGCCTGAACCCTTTCTAACT +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCPLLSP*PEPFLT
Trigger: AGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGCTGTGGGAACTGGATaGATAGTGATGGCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCAVGTG*IVMAGE
Trigger: CTCACCTGCCATCACTATGCATCCAGTTCCCACAGC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCAAAGGGGGACTTCAGTaGCTGAGGGACTGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLKGGLQ*LRDWLR
Trigger: TCTGAGCCAGTCCCTCAGCCACTGAAGTCCCCCTTT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAAAAGGGGGACTTCAGTaGCTGAGGGACTGGCTCAGA +
Preference number: 2 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGKGGLQ*LRDWLR
Trigger: TCTGAGCCAGTCCCTCAGCCACTGAAGTCCCCCTTT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGGCTGGAGCTGCTACTaGTCAATTCAGGGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGGWSCY*SIQGEE
Trigger: CTCTTCCCCCTGAATTGACCAGTAGCAGCTCCAGCC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGTCGCCTCAAACTCCTaGGACCAAGTGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRVASNS*DQVILL
Trigger: CAGGAGGATCACTTGGTCCCAGGAGTTTGAGGCGAC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp TTGAGGGTCTTCAATGAAAGCAGTGGCAATCTAAGATCGACACACTaGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACA +
Preference number: 2 (lower is better)
Translates to: LRVFNESSGNLRSTH*CREEDGQRPGPSHT
Trigger: TGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGATTGCCACTGCTTTCATTGAAGACCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp TCTAGCTGGTATGGGTGGGTTTGGGGAGGGGATTTGCACAATCCATaGGATGGGTTCATGTCACATGAGGGCTCTGCTCACTGGTATCAA +
Preference number: 2 (lower is better)
Translates to: SSWYGWVWGGDLHNP*DGFMSHEGSAHWYQ
Trigger: TTGATACCAGTGAGCAGAGCCCTCATGTGACATGAACCCATCCAATGGATTGTGCAAATCCCCTCCCCAAACCCACCCATACCAGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGTTCGTATGACATTATaGCTAGGAAAAACTGAGGAC +
Preference number: 2 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVVRMTL*LGKTED
Trigger: GTCCTCAGTTTTTCCTAGTCATAATGTCATACGAAC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCTGGTCTCCAACTCCTaGCCTCAACTGATACACCCA +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVLVSNS*PQLIHP
Trigger: TGGGTGTATCAGTTGAGGTCAGGAGTTGGAGACCAG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAGATTAGAAAAGCATTaGATCGCAGCAGGAAAACTC +
Preference number: 2 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVRLEKH*IAAGKL
Trigger: GAGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAAGATTAGAAAAGCATTaGATCGCAGCAGGAAAACTC +
Preference number: 2 (lower is better)
Translates to: PVVSCTRELPLSAREGVGRLEKH*IAAGKL
Trigger: GAGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGGGACCACAGGAGCATaGCATCATGCCCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRGTTGA*HHAQLI
Trigger: AATTAGCTGGGCATGATGGCATGCTCCTGTGGTCCC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGAATGCCTCTTTCATTaGGAGACAGCCCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWECLFH*ETAPLI
Trigger: GATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTGGTATGGGTGGGTTTaGGGAGGGGATTTGCACAAT +
Preference number: 2 (lower is better)
Translates to: VVAPIEEATWDLIMATLSWYGWV*GGDLHN
Trigger: ATTGTGCAAATCCCCTCCCCAAACCCACCCATACCA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGGCCCTTTGGGGTCTTaGTGCCCCCACTGTAAAGCC +
Preference number: 2 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLGPLGS*CPHCKA
Trigger: GGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGCC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAAAGTCAAGCTCCATGTaGCAGGAACAGGACACCGGT +
Preference number: 2 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGKSSSM*QEQDTG
Trigger: ACCGGTGTCCTGTTCCTGCCACATGGAGCTTGACTT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTCACTTTTGTGAAATaGGGCTGGAGCTGCTACTGG +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLTFVK*GWSCYW
Trigger: CCAGTAGCAGCTCCAGCCCCATTTCACAAAAGTGAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGTGCCTTCCACACACTaGAGAAGCAAGACATGTTAT +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSVPSTH*RSKTCY
Trigger: ATAACATGTCTTGCTTCTCCAGTGTGTGGAAGGCAC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGACCCTCTACAATGGATaGGGTGCCAGGTACGCTGAT +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRTLYNG*GARYAD
Trigger: ATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp CATCCAGTGGCAAAGTGGGAAGATCCTTATTGCCACCAGGCTTCTTaGAACAACATAACTTCCAGGCCCCTTGGATGCTATTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: HPVAKWEDPYCHQAS*NNITSRPLGCYCWR
Trigger: CCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCACTTTGCCACTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp GTGACCCATCCAAAGTCATCCAGTGGCAAAGTGGGAAGATCCTTATaGCCACCAGGCTTCTTTGAACAACATAACTTCCAGGCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: VTHPKSSSGKVGRSL*PPGFFEQHNFQAPW
Trigger: CCAAGGGGCCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCACTTTGCCACTGGATGACTTTGGATGGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp CTGACCTCTTTCAAAGTCCAGAGCAGGCAGCTGCTGAAAGCGTGTTaGGTCAGAAGATTCTGTGTTCTTAGCCAATGTCTACTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LTSFKVQSRQLLKAC*VRRFCVLSQCLLAG
Trigger: CCCAGCCAGTAGACATTGGCTAAGAACACAGAATCTTCTGACCAAACACGCTTTCAGCAGCTGCCTGCTCTGGACTTTGAAAGAGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTCCTGCATAAAGCTTaGCTTGGAGTGGGAAGCACT +
Preference number: 2 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKFLHKA*LGVGST
Trigger: AGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGGTGCGTGGATCATTTaGGGTCAGGAATTCAAGACC +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRGAWII*GQEFKT
Trigger: GGTCTTGAATTCCTGACCTCAAATGATCCACGCACC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACTGGTGCTGTCGGAGTaGAGGGGCTCAGGCATCTGG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKLVLSE*RGSGIW
Trigger: CCAGATGCCTGAGCCCCTTCACTCCGACAGCACCAG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTTTTGTAAGAGCCACTaGAGATTAGAAAAGCATTGC +
Preference number: 2 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVFCKSH*RLEKHC
Trigger: GCAATGCTTTTCTAATCTGCAGTGGCTCTTACAAAA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCATGCACCCGTGAGTTaGCCTTGTCGGCAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMHAPVS*PCRQER
Trigger: CCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCAATTTATCTTACATaGTCCCTGTCCGTGCCTTTC +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSIYLT*SLSVPF
Trigger: GAAAGGCACGGACAGGGAGCATGTAAGATAAATTGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGACTCTCGACAGACACTaGTTTCCACGGGTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVTLDRH*FPRVKV
Trigger: CACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCACGAGGGATTAATATaGGCCAGGGACACGTTTCTT +
Preference number: 2 (lower is better)
Translates to: VVAPIEEATWDLIMATLSHEGLI*ARDTFL
Trigger: AAGAAACGTGTCCCTGGCCCATATTAATCCCTCGTG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAATGTTTCAGGTACATaGGCGTGGACCCTAATTATG +
Preference number: 2 (lower is better)
Translates to: VEPAEHSLSILGDPAVWENVSGT*AWTLIM
Trigger: CATAATTAGGGTCCACGCCCATGTACCTGAAACATT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTGGTATGGGTGGGTTTaGGGAGGGGATTTGCACAAT +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRWYGWV*GGDLHN
Trigger: ATTGTGCAAATCCCCTCCCCAAACCCACCCATACCA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAAGCTTGACTTGGAGTaGGAAGCACTGATCAATTTG +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSKLDLE*EALINL
Trigger: CAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAGAGAGAGAGGCTTTTaGTATCAGGAATTCTGGCAA +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSRERGF*YQEFWQ
Trigger: TTGCCAGAATTCCTGATACCAAAAGCCTCTCTCTCT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTTGCACTTAAACGGTTaGCTACGAGGCCTGGATGAA +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLHLNG*LRGLDE
Trigger: TTCATCCAGGCCTCGTAGCCAACCGTTTAAGTGCAA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCTCACTTTTGTGAAATaGGGCTGGAGCTGCTACTGG +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLLTFVK*GWSCYW
Trigger: CCAGTAGCAGCTCCAGCCCCATTTCACAAAAGTGAG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp CCCACCCTTGATCTGAGCCTAACAATCTGGACTCCACTCTGGTCCTaGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAAT +
Preference number: 2 (lower is better)
Translates to: PTLDLSLTIWTPLWS*RGYSTEREAFGIRN
Trigger: ATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATCAAGGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCACGTTTCTTGGCATTaGGGGTCTTCAATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKHVSWH*GSSMKA
Trigger: TGCTTTCATTGAAGACCCTCAATGCCAAGAAACGTG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTTCCTGCATAAAGCTTaGCTTGGAGTGGGAAGCACT +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLFLHKA*LGVGST
Trigger: AGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAGGAATTCTGGCAAATaGAAGAAACACATCAGATCG +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSRNSGK*KKHIRS
Trigger: CGATCTGATGTGTTTCTTTCATTTGCCAGAATTCCT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGTATTTCCCCACCCTTaGTCTGAGCCTAACAATCTG +
Preference number: 2 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGVFPHP*SEPNNL
Trigger: CAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATAC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTTTGGGGAGGGGATTTaGACAATCCATTGGATGGGT +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRFGEGI*TIHWMG
Trigger: ACCCATCCAATGGATTGTGCAAATCCCCTCCCCAAA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCTCTTTCTGGGAACTaGCTGACACTAATTTGTAGT +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSLSGN*LTLICS
Trigger: ACTACAAATTAGTGTCAGGCAGTTCCCAGAAAGAGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGACTACAGGAAGCAGTaGATGGAGGCAGATTTGTTC +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVDYRKQ*MEADLF
Trigger: GAACAAATCTGCCTCCATGCACTGCTTCCTGTAGTC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTCAGGTACATGGGCGTaGACCCTAATTATGGACACA +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVSGTWA*TLIMDT
Trigger: TGTGTCCATAATTAGGGTCCACGCCCATGTACCTGA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAATCGAAGAAGCCACGTaGGACCTCATTATGGCAACT +
Preference number: 2 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGIEEAT*DLIMAT
Trigger: AGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGAT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTTTCTTGTCTCTTTCTaGGAACTGCCTGACACTAAT +
Preference number: 2 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEFLVSF*ELPDTN
Trigger: ATTAGTGTCAGGCAGTTCCCAGAAAGAGACAAGAAA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGATCTGGACTCCACTCTaGTCCTTGAGAGGTTACTCA +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRIWTPL*SLRGYS
Trigger: TGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGAT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp AGTTACTTTCTAAAAGACTACAGGAAGCAGTGCATGGAGGCAGATTaGTTCCCGCCTGCCAGGGCCATCTCGTTAATAACGGACTGTGTT +
Preference number: 2 (lower is better)
Translates to: SYFLKDYRKQCMEAD*FPPARAISLITDCV
Trigger: AACACAGTCCGTTATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCTGCCTCCATGCACTGCTTCCTGTAGTCTTTTAGAAAGTAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGGTTTCATGCACCCGTaGGTTGCCCTTGTCGGCAAG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKGFMHP*VALVGK
Trigger: CTTGCCGACAAGGGCAACTCACGGGTGCATGAAACC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCATTGAGGGTCTTCAATaGAAGCAGTGGCAATCTAAG +
Preference number: 2 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCIEGLQ*KQWQSK
Trigger: CTTAGATTGCCACTGCTTTCATTGAAGACCCTCAAT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCACGTTTCTTGGCATTaGGGGTCTTCAATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: NRLPLREELHRLQFLPKTHVSWH*GSSMKA
Trigger: TGCTTTCATTGAAGACCCTCAATGCCAAGAAACGTG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGCCCATTTTTGATCTaGGTTGAGGGTAACTTATTT +
Preference number: 2 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSCPFLI*VEGNLF
Trigger: AAATAAGTTACCCTCAACTCAGATCAAAAATGGGCA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTGCCCATTTTTGATCTaGGTTGAGGGTAACTTATTT +
Preference number: 2 (lower is better)
Translates to: VEPAEHSLSILGDPAVWECPFLI*VEGNLF
Trigger: AAATAAGTTACCCTCAACTCAGATCAAAAATGGGCA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCATATCTGTGGAAGAGTaGGCAGGGGAAATTGGGATT +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLISVEE*AGEIGI
Trigger: AATCCCAATTTCCCCTGCTCACTCTTCCACAGATAT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACATGCACCCGTGAGTTaGCCTTGTCGGCAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKHAPVS*PCRQER
Trigger: CCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCCCTTGGATGCTATTaGTGGAGGAGGGGGTCAGTC +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPLGCY*WRRGSV
Trigger: GACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTGGGAAGATCCTTATTaGCACCAGGCTTCTTTGAAC +
Preference number: 2 (lower is better)
Translates to: NRLPLREELHRLQFLPKTWEDPY*HQASLN
Trigger: GTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCGCCCACAGCCATCTaGACCAACAGGGGCAGAATT +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPPTAI*TNRGRI
Trigger: AATTCTGCCCCTGTTGGTGCAGATGGCTGTGGGCGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAACAATCTTGGCTCACTaGAGCCTCCACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKTILAH*SLHLLG
Trigger: GCCCAGGAGGTGGAGGCTGCAGTGAGCCAAGATTGT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGAATGCCTCTTTCATTaGGAGACAGCCCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVECLFH*ETAPLI
Trigger: GATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTCCAAAGTCATCCAGTaGCAAAGTGGGAAGATCCTT +
Preference number: 2 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGSKVIQ*QSGKIL
Trigger: AAGGATCTTCCCACTTTGCCACTGGATGACTTTGGA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTCCCACCCCAAGTTGTaGCTCCTATCGAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLSHPKL*LLSKKP
Trigger: TGGCTTCTTCGATAGGAGCCACAACTTGGGGTGGGA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTTCCTACCGAAGACTTaGCTGCCCATTTTTGATCTG +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVFLPKT*LPIFDL
Trigger: CAGATCAAAAATGGGCAGCCAAGTCTTCGGTAGGAA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCTTCCCTGGGGAATTaGGGAGGCGTCTCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPSLGN*GGVSKA
Trigger: AGCTTTGGAGACGCCTCCCCAATTCCCCAGGGAAGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTTTGTGAAATGGGGCTaGAGCTGCTACTGGTCAATT +
Preference number: 2 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGFVKWG*SCYWSI
Trigger: AATTGACCAGTAGCAGCTCCAGCCCCATTTCACAAA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGCCAAAGAGGACATTTaGATGCAGGAGACTATGAAG +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRAKEDI*MQETMK
Trigger: CTTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGCCAAAGAGGACATTTaGATGCAGGAGACTATGAAG +
Preference number: 2 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGAKEDI*MQETMK
Trigger: CTTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGTTCGTATGACATTATaGCTAGGAAAAACTGAGGAC +
Preference number: 2 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKVRMTL*LGKTED
Trigger: GTCCTCAGTTTTTCCTAGTCATAATGTCATACGAAC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCTCCACTCTGGTCCTTaGGAGGTTACTCAACAGAGA +
Preference number: 2 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLLHSGP*EVTQQR
Trigger: TCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAATGTTTCAGGTACATaGGCGTGGACCCTAATTATG +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRNVSGT*AWTLIM
Trigger: CATAATTAGGGTCCACGCCCATGTACCTGAAACATT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGAGGGCTCTGCTCACTaGTATCAAAATCTAAATGCA +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVEGSAH*YQNLNA
Trigger: TGCATTTAGATTTTGATACCAGTGAGCAGAGCCCTC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGAGGGCTCTGCTCACTaGTATCAAAATCTAAATGCA +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGREGSAH*YQNLNA
Trigger: TGCATTTAGATTTTGATACCAGTGAGCAGAGCCCTC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCTTGGATGCTATTGCTaGAGGAGGGGGTCAGTCAAT +
Preference number: 2 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSLGCYC*RRGSVN
Trigger: ATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCACAGGTTTAAAACTTTaGAGATCAACTGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGTGLKL*RSTAEG
Trigger: GCCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATTCCCTTTCCATCCTTaGGGACCCTGCAGTCTGGGA +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKFPFHP*GPCSLG
Trigger: TCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGTTGGCTACGAGGCCTaGATGAAAAGCCACCACGAG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKVGYEA*MKSHHE
Trigger: CTCGTGGTGGCTTTTCATCCAGGCCTCGTAGCCAAC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGAAGAGGGAAATAAATaGGCCATAACCCGAATAACC +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGREEGNK*AITRIT
Trigger: GGTTATTCGGGTTATGGCCCATTTATTTCCCTCTTC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGGGCATGGCTGGACTTaGGAAGGATTCACCCTGTTG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKGHGWT*EGFTLL
Trigger: CAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGTTCCAGTGGTTTCATaGACCCGTGAGTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKVPVVS*TRELPL
Trigger: CAAGGGCAACTCACGGGTGCATGAAACCACTGGAAC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGGCTCAGAGAGCTTGTaGCTAGTTCCTGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKGSESL*LVPAAF
Trigger: AAAGGCTGCAGGAACTAGGCACAAGCTCTCTGAGCC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTTTGGGGAGGGGATTTaGACAATCCATTGGATGGGT +
Preference number: 2 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSFGEGI*TIHWMG
Trigger: ACCCATCCAATGGATTGTGCAAATCCCCTCCCCAAA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGTAAATTCAACAGGTTaGCTCTTAGGGAGGAATTAC +
Preference number: 2 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGVNSTG*LLGRNY
Trigger: GTAATTCCTCCCTAAGAGGCAACCTGTTGAATTTAC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCGGCAAGAGAGGGAGTaGGAACAGAGTTTTGTAAGA +
Preference number: 2 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLRQERE*EQSFVR
Trigger: TCTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCGGCAAGAGAGGGAGTaGGAACAGAGTTTTGTAAGA +
Preference number: 2 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMRQERE*EQSFVR
Trigger: TCTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCACGAGGGATTAATATaGGCCAGGGACACGTTTCTT +
Preference number: 2 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSHEGLI*ARDTFL
Trigger: AAGAAACGTGTCCCTGGCCCATATTAATCCCTCGTG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAAATGCAGCAAATTCTaGGAATGCCTCTTTCATTGG +
Preference number: 2 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRKCSKF*ECLFHW
Trigger: CCAATGAAAGAGGCATTCCCAGAATTTGCTGCATTT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGTCAGTCAATGGATGTaGCAAAGTCAAGTGATTCTA +
Preference number: 2 (lower is better)
Translates to: NRLPLREELHRLQFLPKTVSQWM*QSQVIL
Trigger: TAGAATCACTTGACTTTGCCACATCCATTGACTGAC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTGTTCTTTATATCTGTaGAAGAGTGAGCAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: SYRAQPARCFNFSFILTLCSLYL*KSEQGK
Trigger: TTTCCCCTGCTCACTCTTCCACAGATATAAAGAACA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTAAAACTGAGGACAAGTaGCCCATCCAAAGTCATCCA +
Preference number: 2 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSKTEDK*PIQSHP
Trigger: TGGATGACTTTGGATGGGTCACTTGTCCTCAGTTTT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATCCAGAAGCTACCAGTaGAATCCCGCCCATTTCTCA +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSRSYQ*NPAHFS
Trigger: TGAGAAATGGGCGGGATTTCACTGGTAGCTTCTGGA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTTCCTACCGAAGACTTaGCTGCCCATTTTTGATCTG +
Preference number: 2 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLFLPKT*LPIFDL
Trigger: CAGATCAAAAATGGGCAGCCAAGTCTTCGGTAGGAA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGTATCAAAATCTAAATaGAGCAAATTCTGGGAATGC +
Preference number: 2 (lower is better)
Translates to: LAADNGNNHWARQSFCCVVSKSK*SKFWEC
Trigger: GCATTCCCAGAATTTGCTGCATTTAGATTTTGATAC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATCAAGTGATTCTAGCTaGTATGGGTGGGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSSDSS*YGWVWG
Trigger: TCCCCAAACCCACCCATACCAGCTAGAATCACTTGA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTACAGGTTTAAAACTTTaGAGATCAACTGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSTGLKL*RSTAEG
Trigger: GCCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGAAAGCTACTAGGAGCTaGAAATGGGTTTGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLKATRS*KWVCRK
Trigger: TTTCCTGCAAACCCATTTCCAGCTCCTAGTAGCTTT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACTCCTTGTTGCTTCCTaGCAGTCTCAGACTACATTC +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKLLVAS*QSQTTF
Trigger: GAATGTAGTCTGAGACTGCCAGGAAGCAACAAGGAG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATTTGTGAAATGGGGCTaGAGCTGCTACTGGTCAATT +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKFVKWG*SCYWSI
Trigger: AATTGACCAGTAGCAGCTCCAGCCCCATTTCACAAA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAACTCTTCCCAATTCCTaGACAACTCTTACCTTCCAG +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKTLPNS*TTLTFQ
Trigger: CTGGAAGGTAAGAGTTGTCCAGGAATTGGGAAGAGT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 90 bp AGTATTTATTCCCTGATGGAAAAGCATTCCTGCATAAAGCTTGACTaGGAGTGGGAAGCACTGATCAATTTGTCTTTAATGGGGATTGGA +
Preference number: 2 (lower is better)
Translates to: SIYSLMEKHSCIKLD*EWEALINLSLMGIG
Trigger: TCCAATCCCCATTAAAGACAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCATCAGGGAATAAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATGTTCTTTATATCTGTaGAAGAGTGAGCAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKCSLYL*KSEQGK
Trigger: TTTCCCCTGCTCACTCTTCCACAGATATAAAGAACA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CCCCAGCTTCCCAAGCCCGGAACGGACACTGCGACGTaGGGTGCCCGGCACCGCTCTTTGGGCCTTCTGGAA +
Preference number: 3 (lower is better)
Translates to: PQLPKPGTDTAT*GARHRSLGLLE
Trigger: TTCCAGAAGGCCCAAAGAGCGGTGCCGGGCACCCCACGTCGCAGTGTCCGTTCCGGGCTTGGGAAGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp GCTTCCCAAGCCCGGAACGGACACTGCGACGTGGGGTaGCCGGCACCGCTCTTTGGGCCTTCTGGAAAACCA +
Preference number: 3 (lower is better)
Translates to: ASQARNGHCDVG*PAPLFGPSGKP
Trigger: TGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGGCACCCCACGTCGCAGTGTCCGTTCCGGGCTTGGGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGCCCGGCACCGCTCTTaGGGCCTTCTGGAAAACCAC +
Preference number: 3 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWARHRS*GLLENH
Trigger: GTGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGGC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp GAAGTCAAGCTCCATGTGGCAGGAACAGGACACCGGTaGGGGCTGCCAGGGATGGCAGAGCAAGGTGAGTCA +
Preference number: 3 (lower is better)
Translates to: EVKLHVAGTGHR*GLPGMAEQGES
Trigger: TGACTCACCTTGCTCTGCCATCCCTGGCAGCCCCCACCGGTGTCCTGTTCCTGCCACATGGAGCTTGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp CAGCGACGGCCATGTTCCAGTGGTTTCATGCACCCGTaGGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: QRRPCSSGFMHP*VALVGKRGSGN
Trigger: GTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp AACCCCCACAGCGACGGCCATGTTCCAGTGGTTTCATaGACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: NPHSDGHVPVVS*TRELPLSAREG
Trigger: TCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTCGCTGTGGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp GGGGAGATTATAGCTGGCATGAAGTCAAGCTCCATGTaGCAGGAACAGGACACCGGTGGGGGCTGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: GEIIAGMKSSSM*QEQDTGGGCQG
Trigger: TCCCTGGCAGCCCCCACCGGTGTCCTGTTCCTGCCACATGGAGCTTGACTTCATGCCAGCTATAATCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp GCGACAAACACAGCCTGGACAACCTCGCAAAGAGCGTaGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGA +
Preference number: 3 (lower is better)
Translates to: ATNTAWTTSQRA*GGRQSFKEGAG
Trigger: TCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACGCTCTTTGCGAGGTTGTCCAGGCTGTGTTTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCCAATAGTGCTAAGGTaGACAGACCCTGCGCTACAG +
Preference number: 3 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWPIVLR*TDPALQ
Trigger: CTGTAGCGCAGGGTCTGTCAACCTTAGCACTATTGG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGACCCGTGAGTTGCCCTaGTCGGCAAGAGAGGGAGTG +
Preference number: 3 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWTRELP*SAREGV
Trigger: CACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATCATGCACCCGTGAGTaGCCCTTGTCGGCAAGAGAG +
Preference number: 3 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQSCTRE*PLSARE
Trigger: CTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAACTGGCTCAGAGAGCTaGTGCCTAGTTCCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQTGSES*CLVPAA
Trigger: GGCTGCAGGAACTAGGCACAAGCTCTCTGAGCCAGT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCTGGTATGGGTGGGTTaGGGGAGGGGATTTGCACAA +
Preference number: 3 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVLVWVG*GRGFAQ
Trigger: TTGTGCAAATCCCCTCCCCAAACCCACCCATACCAG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCACCTCTCACTTGTTTaGAGCTTAGGGCAAGACCTG +
Preference number: 3 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWHLSLV*SLGQDL
Trigger: CAGGTCTTGCCCTAAGCTCAAAACAAGTGAGAGGTG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp AACAGTGGCGGCAGAGCACAGGACATGGGAGGGGACTaGGACCCAGCTCAAGAGCACTGGATCTCAGTGAGT +
Preference number: 3 (lower is better)
Translates to: NSGGRAQDMGGD*DPAQEHWISVS
Trigger: ACTCACTGAGATCCAGTGCTCTTGAGCTGGGTCTCAGTCCCCTCCCATGTCCTGTGCTCTGCCGCCACTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TCTACTGGCTGGGGGTCAGTTTTCCCTCCGGGCATCTaGGCATGGCTGGACTTGGGAAGGATTCACCCTGTT +
Preference number: 3 (lower is better)
Translates to: STGWGSVFPPGI*AWLDLGRIHPV
Trigger: AACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCAGATGCCCGGAGGGAAAACTGACCCCCAGCCAGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CATGCCCCCTCCCCCGGACACCCTCAAATCCCACTTTaGCAGCAGATAATGGAAACAACCACTGGGCTAGGC +
Preference number: 3 (lower is better)
Translates to: HAPSPGHPQIPL*QQIMETTTGLG
Trigger: GCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAAAGTGGGATTTGAGGGTGTCCGGGGGAGGGGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp AAACACAGCCTGGACAACCTCGCAAAGAGCGTGGGGTaGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACA +
Preference number: 3 (lower is better)
Translates to: KHSLDNLAKSVG*ASVLQGRCWST
Trigger: TGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACGCTCTTTGCGAGGTTGTCCAGGCTGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp ACGGCCATGTTCCAGTGGTTTCATGCACCCGTGAGTTaGCCTTGTCGGCAAGAGAGGGAGTGGGAACAGAGT +
Preference number: 3 (lower is better)
Translates to: TAMFQWFHAPVS*PCRQEREWEQS
Trigger: ACTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp ACAGAAGGCTTTGAGGACATGGTGGCCACAGCGGCATaGTGGGTATGTGGGGCAGCGGGTAGGGAAATATAC +
Preference number: 3 (lower is better)
Translates to: TEGFEDMVATAA*WVCGAAGREIY
Trigger: GTATATTTCCCTACCCGCTGCCCCACATACCCAGCATGCCGCTGTGGCCACCATGTCCTCAAAGCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp TGCTACAGGTATCTTGTGGATGGAGGCCAGGAATGCTaGTCAGCTTCCTACAGTACCCAAGACGGCCCCCAC +
Preference number: 3 (lower is better)
Translates to: CYRYLVDGGQEC*SASYSTQDGPH
Trigger: GTGGGGGCCGTCTTGGGTACTGTAGGAAGCTGAGCAGCATTCCTGGCCTCCATCCACAAGATACCTGTAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp CACTGCTACAGGTATCTTGTGGATGGAGGCCAGGAATaGTGCTCAGCTTCCTACAGTACCCAAGACGGCCCC +
Preference number: 3 (lower is better)
Translates to: HCYRYLVDGGQE*CSASYSTQDGP
Trigger: GGGGCCGTCTTGGGTACTGTAGGAAGCTGAGCAGCATTCCTGGCCTCCATCCACAAGATACCTGTAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCTGCTGAAAGCGTGTTaGGTCAGAAGATTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWLLKAC*VRRFCV
Trigger: AACACAGAATCTTCTGACCAAACACGCTTTCAGCAG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTGTCTGATGACATACTaGATTGTTACCGTTGGCAGG +
Preference number: 3 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWCLMTY*IVTVGR
Trigger: CCTGCCAACGGTAACAATCAAGTATGTCATCAGACA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp GACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTaGCCCATCACACACACACACACACACACACACACA +
Preference number: 3 (lower is better)
Translates to: DTLVQGRGRTET*PITHTHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCCGCGCTTACAAAACTaGCAGCCGGCTGGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: NRLPLREELHRLQFLPKTPRLQN*QPAGQE
Trigger: CTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCTAAGATCGACACACTaGTGCAGGGAAGAGGACGGA +
Preference number: 3 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLRSTH*CREEDG
Trigger: TCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCTAAGATCGACACACTaGTGCAGGGAAGAGGACGGA +
Preference number: 3 (lower is better)
Translates to: VEPAEHSLSILGDPAVWELRSTH*CREEDG
Trigger: TCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp AAAAAGGAGAAAGGGGGACTTCAGTGGCTGAGGGACTaGCTCAGAGAGCTTGTGCCTAGTTCCTGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: KKEKGGLQWLRD*LRELVPSSCSL
Trigger: AAGGCTGCAGGAACTAGGCACAAGCTCTCTGAGCCAGTCCCTCAGCCACTGAAGTCCCCCTTTCTCCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CCTTTTCACTTTAACAGTCTCCTGGCCTGGGCCCTTTaGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: PFHFNSLLAWAL*GLGAPTVKPFQ
Trigger: TTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGCCCAGGCCAGGAGACTGTTAAAGTGAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TGGTCAGAAGATTCTGTGTTCTTAGCCAATGTCTACTaGCTGGGGGTCAGTTTTCCCTCCGGGCATCTGGGC +
Preference number: 3 (lower is better)
Translates to: WSEDSVFLANVY*LGVSFPSGHLG
Trigger: GCCCAGATGCCCGGAGGGAAAACTGACCCCCAGCCAGTAGACATTGGCTAAGAACACAGAATCTTCTGACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCATGCACCCGTGAGTaGCCCTTGTCGGCAAGAGAG +
Preference number: 3 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSCTRE*PLSARE
Trigger: CTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAACTGGCTCAGAGAGCTaGTGCCTAGTTCCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGTGSES*CLVPAA
Trigger: GGCTGCAGGAACTAGGCACAAGCTCTCTGAGCCAGT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGAAGCACTGATCAATTaGTCTTTAATGGGGATTGGA +
Preference number: 3 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWEALIN*SLMGIG
Trigger: TCCAATCCCCATTAAAGACAAATTGATCAGTGCTTC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp AAAAGCCACCACGAGAGGGCAGTATTTCCCCACCCTTaGTCTGAGCCTAACAATCTGGACTCCACTCTGGTC +
Preference number: 3 (lower is better)
Translates to: KSHHERAVFPHP*SEPNNLDSTLV
Trigger: GACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATACTGCCCTCTCGTGGTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp GGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTaGAAGTGTACCTGGGTCCTTACATTTGGGGAAGGG +
Preference number: 3 (lower is better)
Translates to: GNRLSTDTAFHG*KCTWVLTFGEG
Trigger: CCCTTCCCCAAATGTAAGGACCCAGGTACACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp CAGGAAGCAGTGCATGGAGGCAGATTTGTTCCCGCCTaGCAGGGCCATCTCGTTAATAACGGACTGTGTTTT +
Preference number: 3 (lower is better)
Translates to: QEAVHGGRFVPA*QGHLVNNGLCF
Trigger: AAAACACAGTCCGTTATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCTGCCTCCATGCACTGCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CCAGGCTTCTTTGAACAACATAACTTCCAGGCCCCTTaGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGG +
Preference number: 3 (lower is better)
Translates to: PGFFEQHNFQAP*MLLLEEGVSQW
Trigger: CCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTTATGTTGTTCAAAGAAGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CCACCCCAAGTTGTGGCTCCTATCGAAGAAGCCACGTaGGACCTCATTATGGCAACTCTTTCCAACCTCATC +
Preference number: 3 (lower is better)
Translates to: PPQVVAPIEEAT*DLIMATLSNLI
Trigger: GATGAGGTTGGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAACTTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp GAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTaGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGA +
Preference number: 3 (lower is better)
Translates to: EHSLSILGDPAV*EATRISCLFLG
Trigger: TCCCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TGTTACCGTTGGCAGGACACTGCTACAGGTATCTTGTaGATGGAGGCCAGGAATGCTGCTCAGCTTCCTACA +
Preference number: 3 (lower is better)
Translates to: CYRWQDTATGIL*MEARNAAQLPT
Trigger: TGTAGGAAGCTGAGCAGCATTCCTGGCCTCCATCCACAAGATACCTGTAGCAGTGTCCTGCCAACGGTAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CTTGACCCTGAAGTCCAAGAGAGGGGTGTTGCCCCCTaGGGACATTGGGCAATGTCTGATGACATACTTGAT +
Preference number: 3 (lower is better)
Translates to: LDPEVQERGVAP*GHWAMSDDILD
Trigger: ATCAAGTATGTCATCAGACATTGCCCAATGTCCCCAGGGGGCAACACCCCTCTCTTGGACTTCAGGGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCCGCGCTTACAAAACTaGCAGCCGGCTGGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGPRLQN*QPAGQE
Trigger: CTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCAGATTAGAAAAGCATaGCATCGCAGCAGGAAAACT +
Preference number: 3 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVQIRKA*HRSRKT
Trigger: AGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCTG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGGAATGCCTCTTTCATaGGGAGACAGCCCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSGMPLS*GDSPFN
Trigger: ATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTCC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGGAATGCCTCTTTCATaGGGAGACAGCCCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEGMPLS*GDSPFN
Trigger: ATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTCC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACTGGTATGGGTGGGTTaGGGGAGGGGATTTGCACAA +
Preference number: 3 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGLVWVG*GRGFAQ
Trigger: TTGTGCAAATCCCCTCCCCAAACCCACCCATACCAG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTCCCTCACTCAAGCCTaGGTTGCAGCAATAACCCCC +
Preference number: 3 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRSLTQA*VAAITP
Trigger: GGGGGTTATTGCTGCAACCAAGGCTTGAGTGAGGGA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTGGGCATGGCTGGACTaGGGAAGGATTCACCCTGTT +
Preference number: 3 (lower is better)
Translates to: LAADNGNNHWARQSFCCVWAWLD*GRIHPV
Trigger: AACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTGGGCATGGCTGGACTaGGGAAGGATTCACCCTGTT +
Preference number: 3 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGWAWLD*GRIHPV
Trigger: AACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTCTTCCCACCCCAAGTaGTGGCTCCTATCGAAGAAG +
Preference number: 3 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRSSHPK*WLLSKK
Trigger: CTTCTTCGATAGGAGCCACAACTTGGGGTGGGAAGA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCCCAAAATTCCATATaGATGGGTCTGAAGTGTCCC +
Preference number: 3 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSQNSI*MGLKCP
Trigger: GGGACACTTCAGACCCATCAATATGGAATTTTGGGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTACAGACAGAAGGCTTaGAGGACATGGTGGCCACAG +
Preference number: 3 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGYRQKA*RTWWPQ
Trigger: CTGTGGCCACCATGTCCTCAAAGCCTTCTGTCTGTA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp TATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGATaGAAAGCCACCACGAGAGGGCAGTATTTCCCCACC +
Preference number: 3 (lower is better)
Translates to: YFALKRLATRPG*KATTRGQYFPT
Trigger: GGTGGGGAAATACTGCCCTCTCGTGGTGGCTTTTCATCCAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp GAGACGTCTCATTCCTCCTGGCCAAACTCACTTTTGTaGAATGGGGCTGGAGCTGCTACTGGTCAATTCAGG +
Preference number: 3 (lower is better)
Translates to: ETSHSSWPNSLL*NGAGAATGQFR
Trigger: CCTGAATTGACCAGTAGCAGCTCCAGCCCCATTTCACAAAAGTGAGTTTGGCCAGGAGGAATGAGACGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp AATGAAAGCAGTGGCAATCTAAGATCGACACACTTGTaGAGGGAAGAGGACGGACAGAGACCTGGCCCATCA +
Preference number: 3 (lower is better)
Translates to: NESSGNLRSTHL*REEDGQRPGPS
Trigger: TGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGATTGCCACTGCTTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp CACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTaGCCGGTGCCTTCCACACACTGGAGAAGCAAGACA +
Preference number: 3 (lower is better)
Translates to: HERNCVLLISAN*PVPSTHWRSKT
Trigger: TGTCTTGCTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp CTCAGCCTTCCAAAGCCAGCCTCAATTTATCTTACATaGTCCCTGTCCGTGCCTTTCCTCTCACTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: LSLPKPASIYLT*SLSVPFLSLFP
Trigger: TGGGAAGAGTGAGAGGAAAGGCACGGACAGGGAGCATGTAAGATAAATTGAGGCTGGCTTTGGAAGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp ATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTaGCAAAGTCAAGTGATTCTAGCTGGTATGGGTGGG +
Preference number: 3 (lower is better)
Translates to: MLLLEEGVSQWM*QSQVILAGMGG
Trigger: CCCACCCATACCAGCTAGAATCACTTGACTTTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp AACAACATAACTTCCAGGCCCCTTGGATGCTATTGCTaGAGGAGGGGGTCAGTCAATGGATGTGGCAAAGTC +
Preference number: 3 (lower is better)
Translates to: NNITSRPLGCYC*RRGSVNGCGKV
Trigger: GACTTTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTTATGTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGTGGGAAGATCCTTATaGCCACCAGGCTTCTTTGAA +
Preference number: 3 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKVGRSL*PPGFFE
Trigger: TTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCAC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAACAGGTTTAAAACTTaGGAGATCAACTGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSNRFKT*EINCRG
Trigger: CCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGTT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp CATCAGATCGCTCTCCTGCCTTCTAGCCTGGAGTTGTaGAGCAGCTTGTGTTGGGGATTGAAAGGTGTTTAC +
Preference number: 3 (lower is better)
Translates to: HQIALLPSSLEL*SSLCWGLKGVY
Trigger: GTAAACACCTTTCAATCCCCAACACAAGCTGCTTCACAACTCCAGGCTAGAAGGCAGGAGAGCGATCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp TCTCACCCTCTACAATGGATGGGGTGCCAGGTACGCTaGTTCAGTTCCTGGAGTCTCTTTATCACTACATCC +
Preference number: 3 (lower is better)
Translates to: SHPLQWMGCQVR*FSSWSLFITTS
Trigger: GGATGTAGTGATAAAGAGACTCCAGGAACTGAATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp TTGAACAACATAACTTCCAGGCCCCTTGGATGCTATTaGTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAA +
Preference number: 3 (lower is better)
Translates to: LNNITSRPLGCY*WRRGSVNGCGK
Trigger: TTTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTTATGTTGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp GCAAAGTCAAGTGATTCTAGCTGGTATGGGTGGGTTTaGGGAGGGGATTTGCACAATCCATTGGATGGGTTC +
Preference number: 3 (lower is better)
Translates to: AKSSDSSWYGWV*GGDLHNPLDGF
Trigger: GAACCCATCCAATGGATTGTGCAAATCCCCTCCCCAAACCCACCCATACCAGCTAGAATCACTTGACTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGACACGTTTCTTGGCATaGAGGGTCTTCAATGAAAGC +
Preference number: 3 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKTRFLA*RVFNES
Trigger: GCTTTCATTGAAGACCCTCAATGCCAAGAAACGTGT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCACACGTTTCTTGGCATaGAGGGTCTTCAATGAAAGC +
Preference number: 3 (lower is better)
Translates to: VVAPIEEATWDLIMATLSTRFLA*RVFNES
Trigger: GCTTTCATTGAAGACCCTCAATGCCAAGAAACGTGT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATGCCACCAGGCTTCTTaGAACAACATAACTTCCAGG +
Preference number: 3 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGCHQAS*NNITSR
Trigger: CCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGAAGCACTGATCAATTaGTCTTTAATGGGGATTGGA +
Preference number: 3 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSEALIN*SLMGIG
Trigger: TCCAATCCCCATTAAAGACAAATTGATCAGTGCTTC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp GCCAGGGACACGTTTCTTGGCATTGAGGGTCTTCAATaGAAGCAGTGGCAATCTAAGATCGACACACTTGTG +
Preference number: 3 (lower is better)
Translates to: ARDTFLGIEGLQ*KQWQSKIDTLV
Trigger: CACAAGTGTGTCGATCTTAGATTGCCACTGCTTTCATTGAAGACCCTCAATGCCAAGAAACGTGTCCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp TCTGGATTGCCCATCCTATTAGGACCATTTGCCCTATaGGCTAGGTCAGGACACCTCTCACTTGTTTTGAGC +
Preference number: 3 (lower is better)
Translates to: SGLPILLGPFAL*ARSGHLSLVLS
Trigger: GCTCAAAACAAGTGAGAGGTGTCCTGACCTAGCTCATAGGGCAAATGGTCCTAATAGGATGGGCAATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp AAACTGAGGACAAGTGACCCATCCAAAGTCATCCAGTaGCAAAGTGGGAAGATCCTTATTGCCACCAGGCTT +
Preference number: 3 (lower is better)
Translates to: KLRTSDPSKVIQ*QSGKILIATRL
Trigger: AAGCCTGGTGGCAATAAGGATCTTCCCACTTTGCCACTGGATGACTTTGGATGGGTCACTTGTCCTCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp CAGTATTTCCCCACCCTTGATCTGAGCCTAACAATCTaGACTCCACTCTGGTCCTTGAGAGGTTACTCAACA +
Preference number: 3 (lower is better)
Translates to: QYFPTLDLSLTI*TPLWSLRGYST
Trigger: TGTTGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCAGATTAGAAAAGCATaGCATCGCAGCAGGAAAACT +
Preference number: 3 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCQIRKA*HRSRKT
Trigger: AGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCTG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTCCCAAAATTCCATATaGATGGGTCTGAAGTGTCCC +
Preference number: 3 (lower is better)
Translates to: LAADNGNNHWARQSFCCVSQNSI*MGLKCP
Trigger: GGGACACTTCAGACCCATCAATATGGAATTTTGGGA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGCCAAAGAGGACATTaGGATGCAGGAGACTATGAA +
Preference number: 3 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGSQRGH*DAGDYE
Trigger: TTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGCT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCTTGACCAGAACTGTTaGGGTATTTTAGAACAAAAC +
Preference number: 3 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSLDQNC*GILEQN
Trigger: GTTTTGTTCTAAAATACCCAAACAGTTCTGGTCAAG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGATTTGCACAATCCATaGGATGGGTTCATGTCACAT +
Preference number: 3 (lower is better)
Translates to: LAADNGNNHWARQSFCCVDLHNP*DGFMSH
Trigger: ATGTGACATGAACCCATCCAATGGATTGTGCAAATC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTAACAGGTTTAAAACTTaGGAGATCAACTGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: NRLPLREELHRLQFLPKTNRFKT*EINCRG
Trigger: CCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGTT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp ACAGCCCCTTTAATCAATTTCCCACTCCTCTCCCCATaGCCTGAACCCTTTCTAACTAGAACAATTATGGGG +
Preference number: 3 (lower is better)
Translates to: TAPLINFPLLSP*PEPFLTRTIMG
Trigger: CCCCATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATTGATTAAAGGGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp CCCACCATTTACTCTGAGAGAGTAAATTCAACAGGTTaGCTCTTAGGGAGGAATTACACCGGCTCCAATTCC +
Preference number: 3 (lower is better)
Translates to: PTIYSERVNSTG*LLGRNYTGSNS
Trigger: GGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTTGAATTTACTCTCTCAGAGTAAATGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp GGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTaGCTTCCACACACTGGAGAAGCAAGACATGTTATA +
Preference number: 3 (lower is better)
Translates to: GTVFCLSLQTAR*LPHTGEARHVI
Trigger: TATAACATGTCTTGCTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp AATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTaGGTGCTCCAGGAAATCTATAATGAGAAGTCCTGG +
Preference number: 3 (lower is better)
Translates to: NGNNHWARQSFC*VLQEIYNEKSW
Trigger: CCAGGACTTCTCATTATAGATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp AGAGAGGGAGTGGGAACAGAGTTTTGTAAGAGCCACTaGAGATTAGAAAAGCATTGCATCGCAGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: REGVGTEFCKSH*RLEKHCIAAGK
Trigger: TTTTCCTGCTGCGATGCAATGCTTTTCTAATCTGCAGTGGCTCTTACAAAACTCTGTTCCCACTCCCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp CAAAGTCATCCAGTGGCAAAGTGGGAAGATCCTTATTaGCACCAGGCTTCTTTGAACAACATAACTTCCAGG +
Preference number: 3 (lower is better)
Translates to: QSHPVAKWEDPY*HQASLNNITSR
Trigger: CCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCACTTTGCCACTGGATGACTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp GATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTaGTGCGTGCTCCAGGAAATCTATAATGAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: DNGNNHWARQSF*CVLQEIYNEKS
Trigger: GGACTTCTCATTATAGATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTaGCTACGAGGCCTGGATGAAAAGCCACCACGAGAG +
Preference number: 3 (lower is better)
Translates to: YPLLNSILHLNG*LRGLDEKPPRE
Trigger: CTCTCGTGGTGGCTTTTCATCCAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TGCTACTGGTCAATTCAGGGGGAAGAGGGAAATAAATaGGCCATAACCCGAATAACCCCCAAATATCTTGTC +
Preference number: 3 (lower is better)
Translates to: CYWSIQGEEGNK*AITRITPKYLV
Trigger: GACAAGATATTTGGGGGTTATTCGGGTTATGGCCCATTTATTTCCCTCTTCCCCCTGAATTGACCAGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TTTAATTTCTCCTTTATTCTCACCCTCTACAATGGATaGGGTGCCAGGTACGCTGATTCAGTTCCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: FNFSFILTLYNG*GARYADSVPGV
Trigger: GACTCCAGGAACTGAATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGTGAGAATAAAGGAGAAATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTATTGTTACTTGATATaGTTTCCAGGCACCAAAGCT +
Preference number: 3 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRYCYLI*FPGTKA
Trigger: AGCTTTGGTGCCTGGAAACAATATCAAGTAACAATA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTGGGATGCTAAGTGTTaGTTCTTTATATCTGTGGAA +
Preference number: 3 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRWDAKC*FFISVE
Trigger: TTCCACAGATATAAAGAACAAACACTTAGCATCCCA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp GGGCCAGTGCACTTCCTCTTTAGCAGACACCCAAACTaGACAACAAGATATGCCCACGTACAGTATATAAAA +
Preference number: 3 (lower is better)
Translates to: GPVHFLFSRHPN*TTRYAHVQYIK
Trigger: TTTTATATACTGTACGTGGGCATATCTTGTTGTTCAGTTTGGGTGTCTGCTAAAGAGGAAGTGCACTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR GCA 72 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTaGTTTCCACGGGTGAAAGTGTACCTGGGTCCTTAC +
Preference number: 3 (lower is better)
Translates to: ISINRKQTLDRH*FPRVKVYLGPY
Trigger: GTAAGGACCCAGGTACACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TCTAAATGCAGCAAATTCTGGGAATGCCTCTTTCATTaGGAGACAGCCCCTTTAATCAATTTCCCACTCCTC +
Preference number: 3 (lower is better)
Translates to: SKCSKFWECLFH*ETAPLINFPLL
Trigger: GAGGAGTGGGAAATTGATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTCCCAGAATTTGCTGCATTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp CAGGAGACTATGAAGGTTGGGGACAGCCAGAGAGTATaGATGGGTTATAAAGGAAGACTAGTTAGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: QETMKVGDSQRV*MGYKGRLVSVS
Trigger: AGAAACACTAACTAGTCTTCCTTTATAACCCATTCATACTCTCTGGCTGTCCCCAACCTTCATAGTCTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CCA 72 bp TTGGATGGGTTCATGTCACATGAGGGCTCTGCTCACTaGTATCAAAATCTAAATGCAGCAAATTCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: LDGFMSHEGSAH*YQNLNAANSGN
Trigger: ATTCCCAGAATTTGCTGCATTTAGATTTTGATACCAGTGAGCAGAGCCCTCATGTGACATGAACCCATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACTGCTGAAAGCGTGTTaGGTCAGAAGATTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKLLKAC*VRRFCV
Trigger: AACACAGAATCTTCTGACCAAACACGCTTTCAGCAG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp TTATTCCCTGATGGAAAAGCATTCCTGCATAAAGCTTaGCTTGGAGTGGGAAGCACTGATCAATTTGTCTTT +
Preference number: 3 (lower is better)
Translates to: LFPDGKAFLHKA*LGVGSTDQFVF
Trigger: AAAGACAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCATCAGGGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp CAAACTCATATAAACATACTAAGGCATATTGACAGCTaGCCACCTCCCTCGCACATGGCTTTGATAAGTATT +
Preference number: 3 (lower is better)
Translates to: QTHINILRHIDS*PPPSHMALISI
Trigger: AATACTTATCAAAGCCATGTGCGAGGGAGGTGGTCAGCTGTCAATATGCCTTAGTATGTTTATATGAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp GGTTTTATAATCATTTCTTTGGACTCCTTGACAAAATaGGACAATGTTTCCATCTGTCTGCTACTAGAAAGG +
Preference number: 3 (lower is better)
Translates to: GFIIISLDSLTK*DNVSICLLLER
Trigger: CCTTTCTAGTAGCAGACAGATGGAAACATTGTCTCATTTTGTCAAGGAGTCCAAAGAAATGATTATAAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR TCA 72 bp AATTCCTACCGAAGACTTGGCTGCCCATTTTTGATCTaGGTTGAGGGTAACTTATTTGTCAAAATTAATTTA +
Preference number: 3 (lower is better)
Translates to: NSYRRLGCPFLI*VEGNLFVKINL
Trigger: TAAATTAATTTTGACAAATAAGTTACCCTCAACTCAGATCAAAAATGGGCAGCCAAGTCTTCGGTAGGAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCCAGGGGCTGTTCTTTaGCGGCCGGTGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWPGAVL*RPVAGG
Trigger: CCCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACACTGCGACGTGGGGTaGCCGGCACCGCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLHCDVG*PAPLFG
Trigger: CCCAAAGAGCGGTGCCGGGCACCCCACGTCGCAGTG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGCCAGGCCGTTGGCATaGGGGAGTGAGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLARPLA*GSEPAS
Trigger: GGAGGCTGGCTCACTCCCCCATGCCAACGGCCTGGC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAGGCCTGGAAGATGGTaGAGGGCGGGAGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLRPGRW*RAGGGA
Trigger: AGCTCCGCCTCCCGCCCTGCACCATCTTCCAGGCCT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATGCAGCAGGGACAGCTaGGTCAGGAGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLCSRDS*VRSRVA
Trigger: GGCCACCCTGCTCCTGACCCAGCTGTCCCTGCTGCA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGAGCAGGAGCCGGGGTaGCAGGTGCTGACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLEQEPG*QVLTRL
Trigger: AAGCCTTGTCAGCACCTGTCACCCCGGCTCCTGCTC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACTGGTGCTGTCGGAGTaGAGGGGCTCAGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLLVLSE*RGSGIW
Trigger: CCAGATGCCTGAGCCCCTTCACTCCGACAGCACCAG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTCCCCAGGCTGGTACTaGAGCTCCTGGCTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSPGWY*SSWLPL
Trigger: CAACGGGAGCCAGGAGCTGCAGTACCAGCCTGGGGA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACACTGCGACGTGGGGTaGCCGGCACCGCTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGHCDVG*PAPLFG
Trigger: CCCAAAGAGCGGTGCCGGGCACCCCACGTCGCAGTG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATCACCCACTCATGGCTaGTGGCCCGTCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLSPTHG*WPVGGM
Trigger: CATGCCACCGACGGGCCACCAGCCATGAGTGGGTGA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTGGGGGCCAGGCCGTTaGCATGGGGGAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHWGPGR*HGGVSQ
Trigger: CTGGCTCACTCCCCCATGCCAACGGCCTGGCCCCCA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAACATCCCGTGGGCCGTaGTGCAGTCACGGGCATCGA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLTSRGP*CSHGHR
Trigger: TCGATGCCCGTGACTGCACCACGGCCCACGGGATGT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGAACTGCACATTGGCTaGGTCCCCCAGGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLELHIG*VPQGGA
Trigger: GGCTCCACCCTGGGGGACCCAGCCAATGTGCAGTTC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGAACTGCACATTGGCTaGGTCCCCCAGGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWELHIG*VPQGGA
Trigger: GGCTCCACCCTGGGGGACCCAGCCAATGTGCAGTTC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATCTCCAGGTGCGTGGTaGAACCTTCAGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLSPGAW*NLQGPS
Trigger: TGAGGGGCCCTGAAGGTTTCACCACGCACCTGGAGA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGGCCGAGGAAACCACTaGGGGGCGAGAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQGRGNH*GARSPR
Trigger: CCTCGGGCTTCTCGCCCCTCAGTGGTTTCCTCGGCC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGGGGAACATCTATGTTaGCTCCCTGGGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLGEHLC*LPGRQA
Trigger: GGCCTGCCTCCCAGGGAGTCAACATAGATGTTCCCC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGAGGCCACTCTGCTCTaGGGCGCCCCCACGAATCAG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGEATLL*GAPTNQ
Trigger: CTGATTCGTGGGGGCGCCGCAGAGCAGAGTGGCCTC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACTGGTCCAACGAGGATaGAGGGGACTTGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLLVQRG*RGLGGS
Trigger: GGAACCCCCAAGTCCCCTGCATCCTCGTTGGACCAG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGTGGCCACAGCGGCATaGTGGGTATGTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGVATAA*WVCGAA
Trigger: CGCTGCCCCACATACCCAGCATGCCGCTGTGGCCAC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCCCGGAACGGACACTaGGACGTGGGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEARNGH*DVGCPA
Trigger: TGCCGGGCACCCCACGTCGCAGTGTCCGTTCCGGGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCCGGCCGGTGGCTGGTaGGACAGATCCACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVPAGGW*DRSTAL
Trigger: CAAAGCCGTGGATCTGTCCCACCAGCCACCGGCCGG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATCTCTAGGAGCATGTTaGACACGGCGGGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLSLGAC*TRRGGR
Trigger: ACGGCCTCCCCGCCGTGTCCAACATGCTCCTAGAGA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGGGGCAGGTGGAAGCTaGGTGCTCCTCTCACGAAAC +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWGAGGS*VLLSRN
Trigger: GTTTCGTGAGAGGAGCACCCAGCTTCCACCTGCCCC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGCTTTGAGGACATGGTaGCCACAGCGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLALRTW*PQRHAG
Trigger: CCCAGCATGCCGCTGTGGCCACCATGTCCTCAAAGC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGGCAGGGACTGGCAGTaGGCCAAGGATAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLGRDWQ*AKDREC
Trigger: ACACTCCCTATCCTTGGCCCACTGCCAGTCCCTGCC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCCACAAGGCAGGGACTaGCAGTGGGCCAAGGATAGG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWPQGRD*QWAKDR
Trigger: CCTATCCTTGGCCCACTGCCAGTCCCTGCCTTGTGG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGATGCGGATCAGATCTaGGGCATCATGAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLDADQI*GIMSPS
Trigger: GGACGGGCTCATGATGCCTCAGATCTGATCCGCATC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGGCCCGTCGGTGGCATaGTTTCCTGCATCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGGPSVA*FPASAS
Trigger: AGAGGCGGATGCAGGAAATCATGCCACCGACGGGCC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGCCCGTCGGTGGCATaGTTTCCTGCATCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGPSVA*FPASAS
Trigger: AGAGGCGGATGCAGGAAATCATGCCACCGACGGGCC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGAGCAGGAGCCGGGGTaGCAGGTGCTGACAAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVEQEPG*QVLTRL
Trigger: AAGCCTTGTCAGCACCTGTCACCCCGGCTCCTGCTC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGGGCTCTGGAGGTTTTaGCGGCTAAGGAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGGLWRF*RLRSRA
Trigger: TGCCCGGCTCCTTAGCCGTCAAAACCTCCAGAGCCC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGGCCGAGGAAACCACTaGGGGGCGAGAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEGRGNH*GARSPR
Trigger: CCTCGGGCTTCTCGCCCCTCAGTGGTTTCCTCGGCC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGGTTTCATGCACCCGTaGGTTGCCCTTGTCGGCAAG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWGFMHP*VALVGK
Trigger: CTTGCCGACAAGGGCAACTCACGGGTGCATGAAACC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGCTAGGGAGGCAAACTaGTGCAGCTGCAGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLAREAN*CSCRGV
Trigger: AACGCCTCTGCAGCTGCAGCAGTTTGCCTCCCTAGC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGCCGAGAGCTTCCCCTaGTGGGTCATGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGAESFP*WVMMRW
Trigger: CCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCATGCACCCGTGAGTTaGCCTTGTCGGCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWHAPVS*PCRQER
Trigger: CCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGACAATCTTGGCTCACTaGAGCCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWTILAH*SLHLLG
Trigger: GCCCAGGAGGTGGAGGCTGCAGTGAGCCAAGATTGT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTGCATTAGGCGCTGGTaGTGTCGGAGTGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWCIRRW*CRSEGA
Trigger: AGCCCCTTCACTCCGACAGCACCAGCGCCTAATGCA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAGATGCGACCAGGTCTaGCCACCTCCCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVRCDQV*PPPQLP
Trigger: GGGAAGCTGGGGAGGTGGGCAGACCTGGTCGCATCT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACGTCAAGAGAGGCGGTaGGACGTGTCCCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLRQERR*DVSLRS
Trigger: TGACCTTAGGGACACGTCCCACCGCCTCTCTTGACG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCGTCAAGAGAGGCGGTaGGACGTGTCCCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWRQERR*DVSLRS
Trigger: TGACCTTAGGGACACGTCCCACCGCCTCTCTTGACG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCCAGGCCGTTGGCATaGGGGAGTGAGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEARPLA*GSEPAS
Trigger: GGAGGCTGGCTCACTCCCCCATGCCAACGGCCTGGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGATGGCTCGCCGCTTTGTaGGGGTCCCGTTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGWLAAL*GSRWCL
Trigger: AAGGCACCAACGGGACCCCCACAAAGCGGCGAGCCA...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATGGTACTGCAGCTCCTaGCTCCCGTTGGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLWYCSS*LPLVWR
Trigger: TCTCCACACCAACGGGAGCCAGGAGCTGCAGTACCA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCACGGACACTGCGACGTaGGGTGCCCGGCACCGCTCT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSTDTAT*GARHRS
Trigger: AGAGCGGTGCCGGGCACCCCACGTCGCAGTGTCCGT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGTGTCTCCGGCCTGGATaGGGCCACTCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWCLRPG*GHSALR
Trigger: CCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACA...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACAGAGGCAATGCCTCTaGGTACCTCCAGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGQRQCL*VPPGRC
Trigger: ACAGCGCCCTGGAGGTACTCAGAGGCATTGCCTCTG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACCTCTGCTCCCACTGGTaGGAAGGCTCAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHLCSHW*EGSAQA
Trigger: AGCCTGTGCTGAGCCTTCTCACCAGTGGGAGCAGAG...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGTGGAGGGTGTCAGTaGGAACCACCTCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGGGCQ*EPPQSP
Trigger: GGGAGACTGAGGTGGTTCTCACTGACACCCTCCACC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAGAGAACCGCGATATTaGTCTCCACCAGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLREPRY*SPPAPG
Trigger: ACCAGGCGCTGGTGGAGATCAATATCGCGGTTCTCT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACTTCTGCTAGCTTCTTaGAGCCAATGGCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLLLLAS*SQWLAA
Trigger: AGCGGCGAGCCATTGGCTTCAAGAAGCTAGCAGAAG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCATCAGCAGCCATGGTaGCGTCCCCACAGACGTATA +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWHQQPW*RPHRRI
Trigger: TATACGTCTGTGGGGACGTCACCATGGCTGCTGATG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGCTACGAGGCCTGGATaGAAAGCCACCACGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGATRPG*KATTRG
Trigger: CCCTCTCGTGGTGGCTTTTCATCCAGGCCTCGTAGC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGGACCATTTGCCCTATaGGCTAGGTCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWGPFAL*ARSGHL
Trigger: GAGGTGTCCTGACCTAGCTCATAGGGCAAATGGTCC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGTGGATGAGGCCACTCTaGTCTGCGGCGCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWWMRPL*SAAPPR
Trigger: TCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCA...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACCGAGGTCCTCGTGGTTaGCAGGGAAGACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHRGPRG*QGRHPG
Trigger: ACCTGGGTGTCTTCCCTGGCAACCACGAGGACCTCG...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGCAAACTGCTGCAGCTaGAGAGGCGTTGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHANCCS*RGVGGV
Trigger: CACGCCACCAACGCCTCTGCAGCTGCAGCAGTTTGC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTACGCCGGCGTCCTCTaGCGAGAGCTTCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEYAGVL*RELPLL
Trigger: CAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATCACCCACTCATGGCTaGTGGCCCGTCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQSPTHG*WPVGGM
Trigger: CATGCCACCGACGGGCCACCAGCCATGAGTGGGTGA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAGCGTCACCCACTCATaGCTGGTGGCCCGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESVTHS*LVARRW
Trigger: CCACCGACGGGCCACCAGCCATGAGTGGGTGACGCT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGCTGTGTCACCCGGATaGTCTTGGGGGTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVAVSPG*SWGSHH
Trigger: GTGATGGGACCCCCAAGACCATCCGGGTGACACAGC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGCTGTGTCACCCGGATaGTCTTGGGGGTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHAVSPG*SWGSHH
Trigger: GTGATGGGACCCCCAAGACCATCCGGGTGACACAGC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTTCTTTGCCGGCCGGTaGCTGGTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVFFAGR*LVGQIH
Trigger: GTGGATCTGTCCCACCAGCCACCGGCCGGCAAAGAA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACCTGGCCTGGGGGCCTaGGGGCCAGGCCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGPGLGA*GPGRWH
Trigger: ATGCCAACGGCCTGGCCCCCAGGCCCCCAGGCCAGG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAACTGTTTTCCTGAGGTaGGGGGCTGCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLTVFLR*GAAPSL
Trigger: CAGAGAAGGAGCAGCCCCCCACCTCAGGAAAACAGT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGACCTTGAGGAAGCGTaGACACTTGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVDLEEA*TLGGAA
Trigger: GGCAGCCCCTCCAAGTGTCCACGCTTCCTCAAGGTC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCTGGGTCCCCCAGGGTaGAGCCGTCAGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWELGPPG*SRQAAC
Trigger: ACAAGCAGCCTGACGGCTCCACCCTGGGGGACCCAG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTCTCTAGGAGCATGTTaGACACGGCGGGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVSLGAC*TRRGGR
Trigger: ACGGCCTCCCCGCCGTGTCCAACATGCTCCTAGAGA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGCTCCTGGCTCCCGTTaGTGTGGAGACGCACGAAGA +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVAPGSR*CGDARR
Trigger: TCTTCGTGCGTCTCCACACCAACGGGAGCCAGGAGC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGGGCAGGTGGAAGCTaGGTGCTCCTCTCACGAAAC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGAGGS*VLLSRN
Trigger: GTTTCGTGAGAGGAGCACCCAGCTTCCACCTGCCCC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAAAGGGGGACTTCAGTaGCTGAGGGACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWKGGLQ*LRDWLR
Trigger: TCTGAGCCAGTCCCTCAGCCACTGAAGTCCCCCTTT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGTTGGCTACGAGGCCTaGATGAAAAGCCACCACGAG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLVGYEA*MKSHHE
Trigger: CTCGTGGTGGCTTTTCATCCAGGCCTCGTAGCCAAC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGCTTTGAGGACATGGTaGCCACAGCGGCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGALRTW*PQRHAG
Trigger: CCCAGCATGCCGCTGTGGCCACCATGTCCTCAAAGC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGTCGCCTCAAACTCCTaGGACCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLVASNS*DQVILL
Trigger: CAGGAGGATCACTTGGTCCCAGGAGTTTGAGGCGAC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAGCCTCCCGAGTAGATaGGATTACAGATGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSLPSR*DYRCPP
Trigger: TGGCGGGCATCTGTAATCCCATCTACTCGGGAGGCT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACACCTCGCAAAGAGCGTaGGGTGGGCGTCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHTSQRA*GGRQSF
Trigger: GAAGGACTGACGCCCACCCCACGCTCTTTGCGAGGT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGATGCGGATCAGATCTaGGGCATCATGAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVDADQI*GIMSPS
Trigger: GGACGGGCTCATGATGCCTCAGATCTGATCCGCATC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATCTCCAGGTGCGTGGTaGAACCTTCAGGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQSPGAW*NLQGPS
Trigger: TGAGGGGCCCTGAAGGTTTCACCACGCACCTGGAGA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAGCCAGCGTAGCGGATaGGCTGGGAGTTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQSQRSG*AGSSRL
Trigger: GAGTCTGGAACTCCCAGCTCATCCGCTACGCTGGCT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGGTGGAACACAGGGGTaGTGCTTCCGGACATGGGGG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWGGTQG*CFRTWG
Trigger: CCCCCATGTCCGGAAGCATCACCCCTGTGTTCCACC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTGCGCTGGATGGCTTTaGGGACATCAGCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHCAGWL*GHQQPW
Trigger: CCATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGACTCCTGACCTCAACTaGTACACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVTPDLN*YTHLGL
Trigger: GAGGCCGAGGTGGGTGTATCAGTTGAGGTCAGGAGT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCCTGGGAGGGGTTTTTaGAAGCATACTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVPGRGF*KHTALP
Trigger: GGGGAGGGCAGTATGCTTTCAAAAACCCCTCCCAGG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGACTCCCAGCCTCAAGTaGTCTGCCAGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWETPSLK*SASLGL
Trigger: GAGGCCGAGGCTGGCAGATCACTTGAGGCTGGGAGT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCCAGGGGCTGTTCTTTaGCGGCCGGTGGCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCPGAVL*RPVAGG
Trigger: CCCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACGCGCTTACAAAACTTaGAGCCGGCTGGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGRAYKT*SRLGKR
Trigger: CCTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACATGCACCCGTGAGTTaGCCTTGTCGGCAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGHAPVS*PCRQER
Trigger: CCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAGATCGACACACTTGTaGAGGGAAGAGGACGGACAG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWRSTHL*REEDGQ
Trigger: CTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGCCCGGAACGGACACTaGGACGTGGGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVARNGH*DVGCPA
Trigger: TGCCGGGCACCCCACGTCGCAGTGTCCGTTCCGGGC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATCCTCACCCAGCGGCTaGAAACGCGGCATAAATATG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLSSPSG*KRGINM
Trigger: CATATTTATGCCGCGTTTCCAGCCGCTGGGTGAGGA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCACATCCCGTGGGCCGTaGTGCAGTCACGGGCATCGA +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSTSRGP*CSHGHR
Trigger: TCGATGCCCGTGACTGCACCACGGCCCACGGGATGT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATTGCCGTCTGTCCTCTaGGGGAATATGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLLPSVL*GNMVMA
Trigger: TGCCATCACCATATTCCCCCAGAGGACAGACGGCAA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGGCTCGCCGCTTTGTaGGGGTCCCGTTGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSWLAAL*GSRWCL
Trigger: AAGGCACCAACGGGACCCCCACAAAGCGGCGAGCCA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCAGTGGCTGAGGGACTaGCTCAGAGAGCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVQWLRD*LRELVP
Trigger: AGGCACAAGCTCTCTGAGCCAGTCCCTCAGCCACTG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAAGGGGTGTTGCCCCCTaGGGACATTGGGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGRGVAP*GHWAMS
Trigger: AGACATTGCCCAATGTCCCCAGGGGGCAACACCCCT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACCACCACGCCTGGCCTaGGAGGGGTTTTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGPPRLA*EGFLKA
Trigger: TGCTTTCAAAAACCCCTCCCAGGCCAGGCGTGGTGG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAGAGAACCGCGATATTaGTCTCCACCAGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVREPRY*SPPAPG
Trigger: ACCAGGCGCTGGTGGAGATCAATATCGCGGTTCTCT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCCGAAGGCGCAAAAGTaGGGGTATGCTCGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIPKAQK*GYAREP
Trigger: CGGCTCACGAGCATACCCTCACTTTTGCGCCTTCGG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCTTTCACCATCTGGTTaGCAGGCGGCGCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSLSPSG*QAARPP
Trigger: TGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGGTTTCATGCACCCGTaGGTTGCCCTTGTCGGCAAG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQGFMHP*VALVGK
Trigger: CTTGCCGACAAGGGCAACTCACGGGTGCATGAAACC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACACAGACAGAAGGCTTTaGGGACATGGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHTDRRL*GHGGHS
Trigger: GCTGTGGCCACCATGTCCTCAAAGCCTTCTGTCTGT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACATACTAAGGCATATTaGCAGCTGACCACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLHTKAY*QLTTSL
Trigger: GAGGGAGGTGGTCAGCTGTCAATATGCCTTAGTATG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGGGCATAGCCCCGCTTaGCCAGAACTGTTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGGHSPA*PELFGY
Trigger: ATACCCAAACAGTTCTGGTCAAGCGGGGCTATGCCC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGACGAGAACACAACAATaGAAACAGTGGCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWTRTQQ*KQWRQS
Trigger: GCTCTGCCGCCACTGTTTTCATTGTTGTGTTCTCGT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAAGGTGGTCTCCAGGTaGGTGGTGAAACCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVKVVSR*VVKPSG
Trigger: CCCTGAAGGTTTCACCACGCACCTGGAGACCACCTT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGACGACAGGCACATTaGCCTTCCCCCATAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGRQAH*PSPIGH
Trigger: ATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGGACCACTGGATCCTaGCCACACAGCGCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSWTTGS*PHSARH
Trigger: ATGCCTCGCGCTGTGTGGGCAGGATCCAGTGGTCCA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGTGCCTTTCCAGACATaGGTGTTCCAGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHVPFQT*VFQGSG
Trigger: GCCTGATCCCTGGAACACGCATGTCTGGAAAGGCAC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATTCGGAAAGGGGCAATaGCGGTGCCTGGTCCAACGA +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQFGKGQ*RCLVQR
Trigger: TCGTTGGACCAGGCACCGGCATTGCCCCTTTCCGAA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGGGGGAGGCAGAGGATaGAGTGAGCTGAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQGGGRG*SELRSY
Trigger: GTACGATCTCAGCTCACTGCATCCTCTGCCTCCCCC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACATGCTCCCTGTCCGTaGCTTTCCTCTCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGHAPCP*LSSHSS
Trigger: GGAAGAGTGAGAGGAAAGGCACGGACAGGGAGCATG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAGGCATGAACCACCATaGCTGGCCTACTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLRHEPP*LAYFLS
Trigger: GCTCAAAAAGTAGGCCAGGCATGGTGGTTCATGCCT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACATGATGTCTCCGGCCTaGATGAGGCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHMMSPA*MRPLCS
Trigger: AGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCAT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTTCTCCCCTCTGCCTTaGAGGCTGACTCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVFSPLP*RLTLVA
Trigger: AGCAACCAGAGTCAGCCTCCAAGGCAGAGGGGAGAA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACACTGTTTTCCTGAGGTaGGGGGCTGCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHTVFLR*GAAPSL
Trigger: CAGAGAAGGAGCAGCCCCCCACCTCAGGAAAACAGT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTGCAGCTTGGACCACTaGATCCTGCCCACACAGCGC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPICSLDH*ILPTQR
Trigger: GCGCTGTGTGGGCAGGATCCAGTGGTCCAAGCTGCA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCAGGGTCATTGCCGTTaGCCTGAAGCAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSQGHCR*PEAGAA
Trigger: TGCCGCTCCTGCTTCAGGCCAACGGCAATGACCCTG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCAGCTGCAGAGGCGTTaGTGGCGTGGTGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWQLQRR*WRGDVQ
Trigger: CTGGACATCACCACGCCACCAACGCCTCTGCAGCTG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTGCAGCAGGGACAGCTaGGTCAGGAGCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSCSRDS*VRSRVA
Trigger: GGCCACCCTGCTCCTGACCCAGCTGTCCCTGCTGCA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGTTGGCTACGAGGCCTaGATGAAAAGCCACCACGAG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGVGYEA*MKSHHE
Trigger: CTCGTGGTGGCTTTTCATCCAGGCCTCGTAGCCAAC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGGCTGGAGCTGCTACTaGTCAATTCAGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHGWSCY*SIQGEE
Trigger: CTCTTCCCCCTGAATTGACCAGTAGCAGCTCCAGCC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCTCACTTTTGTGAAATaGGGCTGGAGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWLTFVK*GWSCYW
Trigger: CCAGTAGCAGCTCCAGCCCCATTTCACAAAAGTGAG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTCTCACCCTCTACAATaGATGGGGTGCCAGGTACGC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVSHPLQ*MGCQVR
Trigger: GCGTACCTGGCACCCCATCCATTGTAGAGGGTGAGA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAAGGCTTTGAGGACATaGTGGCCACAGCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVKALRT*WPQRHA
Trigger: AGCATGCCGCTGTGGCCACCATGTCCTCAAAGCCTT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAACCACCACGCCTGGCCTaGGAGGGGTTTTTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQPPRLA*EGFLKA
Trigger: TGCTTTCAAAAACCCCTCCCAGGCCAGGCGTGGTGG...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCTTCAAGGAAGGTGCTaGAGCACAGGGACACTTGGC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVLQGRC*STGTLG
Trigger: GCCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGACTGGTTTATGGGTGTaGGGAGGGAGACGTCGCAAC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVTGLWV*GGRRRN
Trigger: GTTGCGACGTCTCCCTCCCCACACCCATAAACCAGT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618760.4
3UTR CAA 72 bp GACGGCCATGTTCCAGTGGTTTCATGCACCCGTGAGTaGCCCTTGTCGGCAAGAGAGGGAGTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: DGHVPVVSCTRE*PLSAREGVGTE
Trigger: CTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATGGCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp CCTGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTaGGGCCAGACGGGCATAGCCCCGCTTGACCAGAAC +
Preference number: 4 (lower is better)
Translates to: PARAISLITDCV*GQTGIAPLDQN
Trigger: GTTCTGGTCAAGCGGGGCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCGGGGTGACAGGTGCTaGCAAGGCTTCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCRGDRC*QGFSPL
Trigger: GAGAGGGCTGAAGCCTTGTCAGCACCTGTCACCCCG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAACCGAGGGGTCCTGTCTaGAGACCTCACAATGCTATC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQPRGPV*RPHNAI
Trigger: GATAGCATTGTGAGGTCTTCAGACAGGACCCCTCGG...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATGTCTCCGGCCTGGATaGGGCCACTCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGCLRPG*GHSALR
Trigger: CCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCAGGGCCCCTCAGAATaGGGACCACGTGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCQGPSE*GPRGSQ
Trigger: CTGAGACCCACGTGGTCCTCATTCTGAGGGGCCCTG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGGCTGCTCCTTCTCTaGATATGGGTTGTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGLLLL*IWVVED
Trigger: GTCCTCAACAACCCATATTCAGAGAAGGAGCAGCCC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGCTGAGAAGGATGCATaGTGGAGCCCATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVAEKDA*WSPCRC
Trigger: ACATCTGCATGGGCTCCATCATGCATCCTTCTCAGC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGCTGAGAAGGATGCATaGTGGAGCCCATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGAEKDA*WSPCRC
Trigger: ACATCTGCATGGGCTCCATCATGCATCCTTCTCAGC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGACTCGGTGGCGGAGTaGTGGTCAACAATGGTCACT +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQDSVAE*WSTMVT
Trigger: AGTGACCATTGTTGACCATCACTCCGCCACCGAGTC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTGCCAAAGGTGCTGGTaGCCACAAGGACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHCQRCW*PQGPEF
Trigger: AAACTCTGGTCCTTGTGGTCACCAGCACCTTTGGCA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTGTCTGGGGAGGAGCTaGTGGAATAGTAGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWECLGRS*WNSSGA
Trigger: AGCCCCGCTACTATTCCATCAGCTCCTCCCCAGACA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTGGTGCTGTCGGAGTaGAGGGGCTCAGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLVLSE*RGSGIW
Trigger: CCAGATGCCTGAGCCCCTTCACTCCGACAGCACCAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAACTGCTTTCCACGGGTaGAAGTGTACCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGTAFHG*KCTWVL
Trigger: AAGGACCCAGGTACACTTTCACCCGTGGAAAGCAGT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAGGCATATTGACAGCTaGCCACCTCCCTCGCACATG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQRHIDS*PPPSHM
Trigger: CATGTGCGAGGGAGGTGGTCAGCTGTCAATATGCCT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCCTGGGAGGGGTTTTTaGAAGCATACTGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEPGRGF*KHTALP
Trigger: GGGGAGGGCAGTATGCTTTCAAAAACCCCTCCCAGG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGGACGGCCGAGTTTCTaGCAGCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIGRPSF*QRVCVC
Trigger: ACACACACACACACGCTGTCAGAAACTCGGCCGTCC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTGGATGAGGCCACTCTaGTCTGCGGCGCCCCCACGA +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRWMRPL*SAAPPR
Trigger: TCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGAGGCTGACTCTGGTTaGTTTCTTCGCGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSEADSG*FLRGVL
Trigger: CAGGACCCCGCGAAGAAAGCAACCAGAGTCAGCCTC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGACACTTGGAGGGGCTaGCATTCTTTGTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQDTWRG*HSLWGT
Trigger: AGTCCCCCACAAAGAATGGCAGCCCCTCCAAGTGTC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAACGGGCATCGAATACCTaGAGCTTGGACCACTGGATC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQRASNT*SLDHWI
Trigger: GATCCAGTGGTCCAAGCTGCAGGTATTCGATGCCCG...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGGGGGTCCCGTTGGTaGCTTTCCAGACATGCGTGT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSWGSRW*LSRHAC
Trigger: ACACGCATGTCTGGAAAGGCACCAACGGGACCCCCA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTGGGGGTCCCGTTGGTaGCTTTCCAGACATGCGTGT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEWGSRW*LSRHAC
Trigger: ACACGCATGTCTGGAAAGGCACCAACGGGACCCCCA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCCTGGAAGATGGTaGAGGGCGGGAGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGRPGRW*RAGGGA
Trigger: AGCTCCGCCTCCCGCCCTGCACCATCTTCCAGGCCT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAGGGAGGCAAACTGCTaGAGCTGCAGAGGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSREANC*SCRGVG
Trigger: ACCAACGCCTCTGCAGCTGCAGCAGTTTGCCTCCCT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCCACTCCTCTCCCCATaGCCTGAACCCTTTCTAACT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVPLLSP*PEPFLT
Trigger: AGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCCCCTTGGATGCTATTaGTGGAGGAGGGGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSPLGCY*WRRGSV
Trigger: GACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGCTGTGGGAACTGGATaGATAGTGATGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGAVGTG*IVMAGE
Trigger: CTCACCTGCCATCACTATGCATCCAGTTCCCACAGC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGCATTAGGCGCTGGTaGTGTCGGAGTGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSCIRRW*CRSEGA
Trigger: AGCCCCTTCACTCCGACAGCACCAGCGCCTAATGCA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGTGGCCACAGCGGCATaGTGGGTATGTGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGVATAA*WVCGAA
Trigger: CGCTGCCCCACATACCCAGCATGCCGCTGTGGCCAC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGGGACCACAGGAGCATaGCATCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHGTTGA*HHAQLI
Trigger: AATTAGCTGGGCATGATGGCATGCTCCTGTGGTCCC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGCCATCTCGGCTCACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKAISAH*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTGAGCCGAGATGGC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATACAGAAGAAGAGCATaGGACAAACACAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLYRRRA*DKHSLD
Trigger: GTCCAGGCTGTGTTTGTCGCATGCTCTTCTTCTGTA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTTGCCGGCCGGTGGCTaGTGGGACAGATCCACGGCT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTLPAGG*WDRSTA
Trigger: AGCCGTGGATCTGTCCCACCAGCCACCGGCCGGCAA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCTGGGTCCCCCAGGGTaGAGCCGTCAGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVLGPPG*SRQAAC
Trigger: ACAAGCAGCCTGACGGCTCCACCCTGGGGGACCCAG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCAGGTGGTCCCCAGGCTaGTACTGCAGCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCRWSPG*YCSSWL
Trigger: GAGCCAGGAGCTGCAGTACCAGCCTGGGGACCACCT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTTCACGAGGTCCTCGTaGTTGCCAGGGAAGACACCC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIFTRSS*LPGKTP
Trigger: GGGTGTCTTCCCTGGCAACCACGAGGACCTCGTGAA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAGACCCCCTTGTTCTTaGCCTGCAGGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSRPPCS*PAGSLP
Trigger: GGGAAGAGACCCTGCAGGCCAAGAACAAGGGGGTCT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACTTCTTTGGTTTGTCTaGCTCCCGGGAGTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGLLWFV*LPGVSR
Trigger: ACGGCTTACTCCCGGGAGCCAGACAAACCAAAGAAG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGGGGACCCTGCAGTCTaGGAGGCCACTAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEGDPAV*EATRIS
Trigger: AGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAATCTGGACTCCACTCTaGTCCTTGAGAGGTTACTCA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLIWTPL*SLRGYS
Trigger: TGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGAT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGCCACAGCGGCATGCTaGGTATGTGGGGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTATAAC*VCGAAG
Trigger: ACCCGCTGCCCCACATACCCAGCATGCCGCTGTGGC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAACAGGAAGCAGTGCATaGAGGCAGATTTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGTGSSA*RQICSR
Trigger: GCGGGAACAAATCTGCCTCCATGCACTGCTTCCTGT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCCCGGCACCGCTCTTTaGGCCTTCTGGAAAACCACT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEPGTAL*AFWKTT
Trigger: AGTGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCGGGGTGACAGGTGCTaGCAAGGCTTCAGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGRGDRC*QGFSPL
Trigger: GAGAGGGCTGAAGCCTTGTCAGCACCTGTCACCCCG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGGCCTCCTTGCATGCTaGGAAGGATGCATGATGGAG +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSGLLAC*EGCMME
Trigger: CTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGGTTACAGATGTAGTTaGACATCCCGTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEGYRCS*TSRGPW
Trigger: CCACGGCCCACGGGATGTTCAACTACATCTGTAACC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTCATTGCCGTTGGCCTaGAGCAGGAGCGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSSLPLA*SRSGRT
Trigger: TGTCCTGCCGCTCCTGCTTCAGGCCAACGGCAATGA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTCATTGCCGTTGGCCTaGAGCAGGAGCGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSLPLA*SRSGRT
Trigger: TGTCCTGCCGCTCCTGCTTCAGGCCAACGGCAATGA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGACTCGGTGGCGGAGTaGTGGTCAACAATGGTCACT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWDSVAE*WSTMVT
Trigger: AGTGACCATTGTTGACCATCACTCCGCCACCGAGTC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGGTGGAACACAGGGGTaGTGCTTCCGGACATGGGGG +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLGGTQG*CFRTWG
Trigger: CCCCCATGTCCGGAAGCATCACCCCTGTGTTCCACC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCTTCTGCTAGCTTCTTaGAGCCAATGGCTCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLLLAS*SQWLAA
Trigger: AGCGGCGAGCCATTGGCTTCAAGAAGCTAGCAGAAG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGCCGAGGCCAAAAACTaGGAACCTCACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSAEAKN*EPHIGQ
Trigger: CTGGCCAATGTGAGGTTCTCAGTTTTTGGCCTCGGC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCTTTCACCATCTGGTTaGCAGGCGGCGCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKLSPSG*QAARPP
Trigger: TGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGAGCATACGCCGTGGTaGATTGGTCCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQEHTPW*IGPSPS
Trigger: AGATGGAGAAGGACCAATTCACCACGGCGTATGCTC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCAGCCTGTATCCGGTTaGGCCAGGAGGAGCATACGC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSQPVSG*ARRSIR
Trigger: GCGTATGCTCCTCCTGGCTCAACCGGATACAGGCTG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCAGAGGGCAACAAGCCTaGGGGACAAGTTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIRGQQA*GTSSSH
Trigger: GTGGGAAGAACTTGTCCCTCAGGCTTGTTGCCCTCT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGAGGATGCAGTGAGCTaGGATCGTACCACTGTACGC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEEDAVS*DRTTVR
Trigger: GCGTACAGTGGTACGATCTCAGCTCACTGCATCCTC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGGTGCGTGGATCATTTaGGGTCAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGGAWII*GQEFKT
Trigger: GGTCTTGAATTCCTGACCTCAAATGATCCACGCACC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACAACTCATCTTTTCCCTaGGCCTGCTCTTCAGAGACC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHNSSFP*ACSSET
Trigger: GGTCTCTGAAGAGCAGGCTCAGGGAAAAGATGAGTT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTACTCCCAGCCTCAAGTaGTCTGCCAGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTTPSLK*SASLGL
Trigger: GAGGCCGAGGCTGGCAGATCACTTGAGGCTGGGAGT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGCTGAGCCAGGAGTGTaGGTCTTAACAATCACAACG +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVAEPGV*VLTITT
Trigger: CGTTGTGATTGTTAAGACTCACACTCCTGGCTCAGC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACGAGGCCCCATCCACTaGCAGGGGCTGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGRGPIH*QGLFFA
Trigger: GGCAAAGAACAGCCCCTGGCAGTGGATGGGGCCTCG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGTCTTCAGGCCTCCTTaGATGCTGAGAAGGATGCAT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVVFRPP*MLRRMH
Trigger: ATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGAC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGAGAGCTGTCCTTTTGTaGGGACGTCTTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWRAVLL*GRLQAS
Trigger: GGAGGCCTGAAGACGTCCGCACAAAAGGACAGCTCT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCTCTTGGCCATAGCCTaGCCCATCAGCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLLAIA*PISLAE
Trigger: CTCGGCCAAGCTGATGGGGCAGGCTATGGCCAAGAG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCCCCAGGCTGGTACTaGAGCTCCTGGCTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSPGWY*SSWLPL
Trigger: CAACGGGAGCCAGGAGCTGCAGTACCAGCCTGGGGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGCAAACTGCTGCAGCTaGAGAGGCGTTGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKANCCS*RGVGGV
Trigger: CACGCCACCAACGCCTCTGCAGCTGCAGCAGTTTGC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACATGGCCACAGTGAGGTaGACTTCATCAGGGTACATG +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHMATVR*TSSGYM
Trigger: CATGTACCCTGATGAAGTGCACCTCACTGTGGCCAT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTGGTCCAACGAGGATaGAGGGGACTTGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLVQRG*RGLGGS
Trigger: GGAACCCCCAAGTCCCCTGCATCCTCGTTGGACCAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCTTGTGCCTAGTTCCTaGAGCCTTTCCAGGGGAACC +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLVPSS*SLSRGT
Trigger: GGTTCCCCTGGAAAGGCTGCAGGAACTAGGCACAAG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGAGATTGCGCTGTGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGEIALC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACACAGCGCAATCTC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGCCATCTCGGCTCACTaGAGCCTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGAISAH*SLCLLG
Trigger: ACCCAGGAGGCAGAGGCTGCAGTGAGCCGAGATGGC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAGATGCGACCAGGTCTaGCCACCTCCCCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRRCDQV*PPPQLP
Trigger: GGGAAGCTGGGGAGGTGGGCAGACCTGGTCGCATCT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCATGATGTCTCCGGCCTaGATGAGGCCACTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIMMSPA*MRPLCS
Trigger: AGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCAT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTCTTTGCCGGCCGGTaGCTGGTGGGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKFFAGR*LVGQIH
Trigger: GTGGATCTGTCCCACCAGCCACCGGCCGGCAAAGAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTTCCAACACCAGCTCTaGAGGAATCTGGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVFQHQL*RNLEEL
Trigger: GAGCTCTTCCAGATTCCTCCAGAGCTGGTGTTGGAA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACCTTCCTGCACAGAGTTaGGGTGCCTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHLPAQS*GASFPS
Trigger: TGATGGAAATGAGGCACCCCAACTCTGTGCAGGAAG...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTACGCCGTGGTGAATTaGTCCTTCTCCATCTCGAGT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHYAVVN*SFSISS
Trigger: ACTCGAGATGGAGAAGGACCAATTCACCACGGCGTA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCGAAGACCAGGACCATaGGGCAGGGGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIRRPGP*GRGSFL
Trigger: AAGGAATGAACCCCTGCCCCATGGTCCTGGTCTTCG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAGATATGATCTATCTTaGATTGCCGGCACCCGAAGA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLRYDLS*IAGTRR
Trigger: TCTTCGGGTGCCGGCAATCCAAGATAGATCATATCT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCCACAGACGTATATGTaGCCCCCTTGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIPQTYM*PPCSFR
Trigger: CCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAAAGGGGGACTTCAGTaGCTGAGGGACTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEKGGLQ*LRDWLR
Trigger: TCTGAGCCAGTCCCTCAGCCACTGAAGTCCCCCTTT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACCTTGGATGCTATTGCTaGAGGAGGGGGTCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHLGCYC*RRGSVN
Trigger: ATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAG...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTTCCCTTTCCATCCTTaGGGACCCTGCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIFPFHP*GPCSLG
Trigger: TCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGACTTTAACAGTCTCCTaGCCTGGGCCCTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWETLTVS*PGPFGV
Trigger: GACCCCAAAGGGCCCAGGCCAGGAGACTGTTAAAGT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTTTGTGAAATGGGGCTaGAGCTGCTACTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWFVKWG*SCYWSI
Trigger: AATTGACCAGTAGCAGCTCCAGCCCCATTTCACAAA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTCTCACCCTCTACAATaGATGGGGTGCCAGGTACGC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESHPLQ*MGCQVR
Trigger: GCGTACCTGGCACCCCATCCATTGTAGAGGGTGAGA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGGGCATGGCTGGACTTaGGAAGGATTCACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSGHGWT*EGFTLL
Trigger: CAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGAAGGCTTTGAGGACATaGTGGCCACAGCGGCATGCT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWKALRT*WPQRHA
Trigger: AGCATGCCGCTGTGGCCACCATGTCCTCAAAGCCTT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGAGCACAGGGACACTTaGCAGAGATTAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGEHRDT*QRLAAL
Trigger: CAATGCTGCTAATCTCTGCCAAGTGTCCCTGTGCTC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCTTCAAGGAAGGTGCTaGAGCACAGGGACACTTGGC +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLQGRC*STGTLG
Trigger: GCCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCACCTCGCAAAGAGCGTaGGGTGGGCGTCAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSTSQRA*GGRQSF
Trigger: GAAGGACTGACGCCCACCCCACGCTCTTTGCGAGGT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCAGCCCTCTCTGTCTTTaGCGTCAGCTCAGCGTCACC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCSPLCL*RQLSVT
Trigger: GGTGACGCTGAGCTGACGTCAAAGACAGAGAGGGCT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAGCCCTCTCTGTCTTTaGCGTCAGCTCAGCGTCACC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSPLCL*RQLSVT
Trigger: GGTGACGCTGAGCTGACGTCAAAGACAGAGAGGGCT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCAGAGGCAATGCCTCTaGGTACCTCCAGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTQRQCL*VPPGRC
Trigger: ACAGCGCCCTGGAGGTACTCAGAGGCATTGCCTCTG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTCCCCCATAGGTCATTaGAGACTCGGTCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPISPIGH*RLGRSP
Trigger: TGGAGAACGACCGAGTCTTCAATGACCTATGGGGGA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAGCCAGCGTAGCGGATaGGCTGGGAGTTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRSQRSG*AGSSRL
Trigger: GAGTCTGGAACTCCCAGCTCATCCGCTACGCTGGCT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTCTCAAAGTTGTCTCTaGGGTCGGGCCCATCGCCTG +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSQSCL*GRAHRL
Trigger: CAGGCGATGGGCCCGACCTCAGAGACAACTTTGAGA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCCGAAGGCGCAAAAGTaGGGGTATGCTCGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGPKAQK*GYAREP
Trigger: CGGCTCACGAGCATACCCTCACTTTTGCGCCTTCGG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCCTGCAAACCCTTGCTaGGGACCAGCAGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGPANPC*GPADAA
Trigger: AGCAGCGTCTGCTGGTCCTCAGCAAGGGTTTGCAGG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTGCGCTGGATGGCTTTaGGGACATCAGCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSCAGWL*GHQQPW
Trigger: CCATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGTATTTCCCCACCCTTaGTCTGAGCCTAACAATCTG +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGVFPHP*SEPNNL
Trigger: CAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATAC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGGGTGCCAGGTACGCTaGTTCAGTTCCTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKGCQVR*FSSWSL
Trigger: GAGACTCCAGGAACTGAATCAGCGTACCTGGCACCC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCTGGTCTCCAACTCCTaGCCTCAACTGATACACCCA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWELVSNS*PQLIHP
Trigger: TGGGTGTATCAGTTGAGGTCAGGAGTTGGAGACCAG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGGGGAACATCTATGTTaGCTCCCTGGGAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLGEHLC*LPGRQA
Trigger: GGCCTGCCTCCCAGGGAGTCAACATAGATGTTCCCC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGACTGCTTTCCACGGGTaGAAGTGTACCTGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWTAFHG*KCTWVL
Trigger: AAGGACCCAGGTACACTTTCACCCGTGGAAAGCAGT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGAGGCCACTCTGCTCTaGGGCGCCCCCACGAATCAG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGEATLL*GAPTNQ
Trigger: CTGATTCGTGGGGGCGCCGCAGAGCAGAGTGGCCTC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGAGGTTTGTGTGACTTaGCGTCCAAATCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHEVCVT*RPNLCP
Trigger: TGGACAGAGATTTGGACGGCAAGTCACACAAACCTC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGGCGGTTTCCAGCCCTaGTGTATGCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIGGFQP*CMHISV
Trigger: CACAGAGATATGCATACAGCAGGGCTGGAAACCGCC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCGATGGTGGGGTTCTTaGCCCATTTCCATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIRWWGS*PISIPR
Trigger: ACGAGGAATGGAAATGGGGCAAGAACCCCACCATCG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAATGGCCACAGTGAGGTaGACTTCATCAGGGTACATG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQMATVR*TSSGYM
Trigger: CATGTACCCTGATGAAGTGCACCTCACTGTGGCCAT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCTTCTCCATCTCGAGTaGGGTAGGAAACGATGGCCA +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSLLHLE*GRKRWP
Trigger: TGGCCATCGTTTCCTACCGCACTCGAGATGGAGAAG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTCGGAAAGGGGCAATaGCGGTGCCTGGTCCAACGA +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKFGKGQ*RCLVQR
Trigger: TCGTTGGACCAGGCACCGGCATTGCCCCTTTCCGAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAACAGACTCCGCCAGCTaGTCCTGCAGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGTDSAS*SCRMSC
Trigger: GCAGGACATCCTGCAGGAGCAGCTGGCGGAGTCTGT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTACAGACTCCGCCAGCTaGTCCTGCAGGATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTTDSAS*SCRMSC
Trigger: GCAGGACATCCTGCAGGAGCAGCTGGCGGAGTCTGT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGTTCCAGTGGTTTCATaGACCCGTGAGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEVPVVS*TRELPL
Trigger: CAAGGGCAACTCACGGGTGCATGAAACCACTGGAAC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCTGTGGGAACTGGATaGATAGTGATGGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEAVGTG*IVMAGE
Trigger: CTCACCTGCCATCACTATGCATCCAGTTCCCACAGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGGGGGAGGCAGAGGATaGAGTGAGCTGAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKGGGRG*SELRSY
Trigger: GTACGATCTCAGCTCACTGCATCCTCTGCCTCCCCC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGACAATCTTGGCTCACTaGAGCCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKTILAH*SLHLLG
Trigger: GCCCAGGAGGTGGAGGCTGCAGTGAGCCAAGATTGT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGACTACAGGAAGCAGTaGATGGAGGCAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVDYRKQ*MEADLF
Trigger: GAACAAATCTGCCTCCATGCACTGCTTCCTGTAGTC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCTTATTGAAACAGACTaGCATCCTCTGTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWLIETD*HPLFWH
Trigger: ATGCCAGAACAGAGGATGGCAGTCTGTTTCAATAAG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCCTCACCCAGCGGCTaGAAACGCGGCATAAATATG +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSSPSG*KRGINM
Trigger: CATATTTATGCCGCGTTTCCAGCCGCTGGGTGAGGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACTGGTGGCCCGTCGGTaGCATGATTTCCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGLVARR*HDFLHP
Trigger: CGGATGCAGGAAATCATGCCACCGACGGGCCACCAG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAGCGTCACCCACTCATaGCTGGTGGCCCGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSVTHS*LVARRW
Trigger: CCACCGACGGGCCACCAGCCATGAGTGGGTGACGCT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGATCCACGGCTTTGGTaGGGGGACCCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGDPRLW*GDPGAV
Trigger: CACAGCCCCTGGGTCCCCCCACCAAAGCCGTGGATC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTGGGGGCCAGGCCGTTaGCATGGGGGAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMWGPGR*HGGVSQ
Trigger: CTGGCTCACTCCCCCATGCCAACGGCCTGGCCCCCA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCTGGCCTGGGGGCCTaGGGGCCAGGCCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPGLGA*GPGRWH
Trigger: ATGCCAACGGCCTGGCCCCCAGGCCCCCAGGCCAGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGACCTTGAGGAAGCGTaGACACTTGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLDLEEA*TLGGAA
Trigger: GGCAGCCCCTCCAAGTGTCCACGCTTCCTCAAGGTC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTCCAGCCTTTCCATGTaGGCTTTGGAGCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHSSLSM*ALEPNL
Trigger: AAGATTTGGCTCCAAAGCCCACATGGAAAGGCTGGA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCAGGGTCATTGCCGTTaGCCTGAAGCAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLQGHCR*PEAGAA
Trigger: TGCCGCTCCTGCTTCAGGCCAACGGCAATGACCCTG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGCTCCTGGCTCCCGTTaGTGTGGAGACGCACGAAGA +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGAPGSR*CGDARR
Trigger: TCTTCGTGCGTCTCCACACCAACGGGAGCCAGGAGC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCTGCAGAGGCGTTGGTaGCGTGGTGATGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLQRRW*RGDVQV
Trigger: TACCTGGACATCACCACGCCACCAACGCCTCTGCAG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCAGCTGCAGAGGCGTTaGTGGCGTGGTGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRQLQRR*WRGDVQ
Trigger: CTGGACATCACCACGCCACCAACGCCTCTGCAGCTG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCAGGGTGGCCGGCATCTaGATAGATGGGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSRVAGI*IDGNSS
Trigger: GGAGGAGTTCCCATCTATCCAGATGCCGGCCACCCT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAGACCCCCTTGTTCTTaGCCTGCAGGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKRPPCS*PAGSLP
Trigger: GGGAAGAGACCCTGCAGGCCAAGAACAAGGGGGTCT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCAGTGGCTGAGGGACTaGCTCAGAGAGCTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKQWLRD*LRELVP
Trigger: AGGCACAAGCTCTCTGAGCCAGTCCCTCAGCCACTG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTCAAGTGATTCTAGCTaGTATGGGTGGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHSSDSS*YGWVWG
Trigger: TCCCCAAACCCACCCATACCAGCTAGAATCACTTGA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAACTTCCAGGCCCCTTaGATGCTATTGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWENFQAP*MLLLEE
Trigger: CTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGGCCCTTTGGGGTCTTaGTGCCCCCACTGTAAAGCC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGGPLGS*CPHCKA
Trigger: GGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGCC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAAGCTTGACTTGGAGTaGGAAGCACTGATCAATTTG +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLKLDLE*EALINL
Trigger: CAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAACTGAGCCTAACAATCTaGACTCCACTCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQLSLTI*TPLWSL
Trigger: CAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAG...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACCTCTCCCCACGGTCTaGTCCCAGCCCACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGPLPTV*SQPTFS
Trigger: AGAAAAGGTGGGCTGGGACCAGACCGTGGGGAGAGG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCCTCTCCCCACGGTCTaGTCCCAGCCCACCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRPLPTV*SQPTFS
Trigger: AGAAAAGGTGGGCTGGGACCAGACCGTGGGGAGAGG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACCCTCTACAATGGATaGGGTGCCAGGTACGCTGAT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPITLYNG*GARYAD
Trigger: ATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGAGGGGCTCAGGCATCTaGATTGCCCATCCTATTAGG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWRGSGI*IAHPIR
Trigger: CCTAATAGGATGGGCAATCCAGATGCCTGAGCCCCT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGGCTGCATTAGGCGCTaGTGCTGTCGGAGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGGCIRR*CCRSEG
Trigger: CCCTTCACTCCGACAGCACCAGCGCCTAATGCAGCC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGCCACAGCGGCATGCTaGGTATGTGGGGCAGCGGGT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGATAAC*VCGAAG
Trigger: ACCCGCTGCCCCACATACCCAGCATGCCGCTGTGGC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCGAGGCCAGGCCAGGTTaGCCTCCAAAGTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSEARPG*PPKSNP
Trigger: GGGATTTGACTTTGGAGGCCAACCTGGCCTGGCCTC...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGGCACTTCGATGTCCTaGAGTTACTTTCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLGTSMS*SYFLKD
Trigger: GTCTTTTAGAAAGTAACTCCAGGACATCGAAGTGCC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCAGGTATCTTGTGGATaGAGGCCAGGAATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIQVSCG*RPGMLL
Trigger: GAGCAGCATTCCTGGCCTCCATCCACAAGATACCTG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAGAGACGAACAGAAATaGCATTGGGCTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVRDEQK*HWAGFA
Trigger: AGCAAATCCAGCCCAATGTCATTTCTGTTCGTCTCT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCTCTGCCTTGGAGGCTaGCTCTGGTTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLCLGG*LWLLSS
Trigger: CGAAGAAAGCAACCAGAGTCAGCCTCCAAGGCAGAG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCAGGCTCTATCTCCTTaGGCAGTTCATTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIQALSP*AVHCSP
Trigger: GGGAGAACAATGAACTGCTCAAGGAGATAGAGCCTG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCTGAATATGGGTTGTTaGGGACGACAGGCACATTGC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWELNMGC*GRQAHC
Trigger: GCAATGTGCCTGTCGTCCTCAACAACCCATATTCAG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCTCAAAGTTGTCTCTaGGGTCGGGCCCATCGCCTG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSQSCL*GRAHRL
Trigger: CAGGCGATGGGCCCGACCTCAGAGACAACTTTGAGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGCCGAGGCCAAAAACTaGGAACCTCACATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCAEAKN*EPHIGQ
Trigger: CTGGCCAATGTGAGGTTCTCAGTTTTTGGCCTCGGC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCATCACAGGCTGCCTTaGAGACCTTCTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTHHRLP*RPSWPR
Trigger: CCTGGGCCAAGAAGGTCTTCAAGGCAGCCTGTGATG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCATCACAGGCTGCCTTaGAGACCTTCTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGHHRLP*RPSWPR
Trigger: CCTGGGCCAAGAAGGTCTTCAAGGCAGCCTGTGATG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGAAGGAGCCGGGCAGCTaGGACTCGCTTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVKEPGS*DSLFVD
Trigger: GTCCACAAAAAGCGAGTCTCAGCTGCCCGGCTCCTT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGACGCACGAAGATAGTTaGCCGACTGGATTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWTHEDS*PTGFRA
Trigger: AGCCCTAAATCCAGTCGGTCAACTATCTTCGTGCGT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACCACGTTTCTTGGCATTaGGGGTCTTCAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHHVSWH*GSSMKA
Trigger: TGCTTTCATTGAAGACCCTCAATGCCAAGAAACGTG...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTTTCATCCCCAAGGGTaGAGCAGCAAGCCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCFHPQG*SSKPAL
Trigger: CAAAGCGGGCTTGCTGCTTCACCCTTGGGGATGAAA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTTCATCCCCAAGGGTaGAGCAGCAAGCCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKFHPQG*SSKPAL
Trigger: CAAAGCGGGCTTGCTGCTTCACCCTTGGGGATGAAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCGGCAGAAGAATCACTTaGACTGGGGGAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCGRRIT*TGGGRG
Trigger: TCCTCTGCCTCCCCCAGTTCAAGTGATTCTTCTGCC...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCGGCAGAAGAATCACTTaGACTGGGGGAGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSGRRIT*TGGGRG
Trigger: TCCTCTGCCTCCCCCAGTTCAAGTGATTCTTCTGCC...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGGTGCGTGGATCATTTaGGGTCAGGAATTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWGAWII*GQEFKT
Trigger: GGTCTTGAATTCCTGACCTCAAATGATCCACGCACC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGGGTGCCAGGTACGCTaGTTCAGTTCCTGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGGCQVR*FSSWSL
Trigger: GAGACTCCAGGAACTGAATCAGCGTACCTGGCACCC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGACTCCTGACCTCAACTaGTACACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVTPDLN*YTHLGL
Trigger: GAGGCCGAGGTGGGTGTATCAGTTGAGGTCAGGAGT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCGGATGCAGGAGACTATaGAGGTTGGGGACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSGCRRL*RLGTAR
Trigger: TCTGGCTGTCCCCAACCTTCATAGTCTCCTGCATCC...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCTGAGCCAGGAGTGTaGGTCTTAACAATCACAACG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEAEPGV*VLTITT
Trigger: CGTTGTGATTGTTAAGACTCACACTCCTGGCTCAGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATGCAGATGTACTCAGTaGATCCCGTTTCCAATGTGC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQCRCTQ*IPFPMC
Trigger: GCACATTGGAAACGGGATGCACTGAGTACATCTGCA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGTCTTCAGGCCTCCTTaGATGCTGAGAAGGATGCAT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEVFRPP*MLRRMH
Trigger: ATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGAC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCAGGGAGGCAAACTGCTaGAGCTGCAGAGGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLREANC*SCRGVG
Trigger: ACCAACGCCTCTGCAGCTGCAGCAGTTTGCCTCCCT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCAGGTGGAAGCTGGGTaGTCCTCTCACGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLQVEAG*SSHETG
Trigger: CCCTGTTTCGTGAGAGGAGCACCCAGCTTCCACCTG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTATATGTGGCCCCCTTaGTCCTTCAGGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKYMWPP*SFRARY
Trigger: GTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAGATTAGAAAAGCATTaGATCGCAGCAGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLRLEKH*IAAGKL
Trigger: GAGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACCCCTTGGATGCTATTaGTGGAGGAGGGGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGPLGCY*WRRGSV
Trigger: GACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCCGCCCACAGCCATCTaGACCAACAGGGGCAGAATT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTPPTAI*TNRGRI
Trigger: AATTCTGCCCCTGTTGGTGCAGATGGCTGTGGGCGG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCAGCTCAACGGGCCATaGTCTGTACTGTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCQLNGP*SVLWPE
Trigger: TTCTGGCCACAGTACAGAGCATGGCCCGTTGAGCTG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGCTAGGCAAAGTTTCTaGTGCGTGCTCCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIARQSF*CVLQEI
Trigger: GATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGTGTGTGTGGTGAGATaGGACCAGGTCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRVCVVR*DQVCPP
Trigger: AGGTGGGCAGACCTGGTCGCATCTCACCACACACAC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGTGTGTGTGGTGAGATaGGACCAGGTCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTVCVVR*DQVCPP
Trigger: AGGTGGGCAGACCTGGTCGCATCTCACCACACACAC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCCGGCCGGTGGCTGGTaGGACAGATCCACGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMPAGGW*DRSTAL
Trigger: CAAAGCCGTGGATCTGTCCCACCAGCCACCGGCCGG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTTGCCGGCCGGTGGCTaGTGGGACAGATCCACGGCT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMLPAGG*WDRSTA
Trigger: AGCCGTGGATCTGTCCCACCAGCCACCGGCCGGCAA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGGAAGCGTGGACACTTaGAGGGGCTGCCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKGSVDT*RGCHSL
Trigger: CAAAGAATGGCAGCCCCTCCAAGTGTCCACGCTTCC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTTGTGGGGGTCCCGTTaGTGCCTTTCCAGACATGCG +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLLWGSR*CLSRHA
Trigger: CGCATGTCTGGAAAGGCACCAACGGGACCCCCACAA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTTGTGGGGGTCCCGTTaGTGCCTTTCCAGACATGCG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTLWGSR*CLSRHA
Trigger: CGCATGTCTGGAAAGGCACCAACGGGACCCCCACAA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCTGAGAACCTCACATTaGCCAGGGGTCCAGCACTCT +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLRTSH*PGVQHS
Trigger: AGAGTGCTGGACCCCTGGCCAATGTGAGGTTCTCAG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACCTTGTGTGAGTTCTaGAGCTTCGGCCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPITLCEF*SFGHKG
Trigger: ACCTTTGTGGCCGAAGCTCCAGAACTCACACAAGGT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAGGTGGTCCCCAGGCTaGTACTGCAGCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGRWSPG*YCSSWL
Trigger: GAGCCAGGAGCTGCAGTACCAGCCTGGGGACCACCT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCCAGCACCTCCACGATaGTGGGGTTCTTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGPAPPR*WGSCPI
Trigger: AATGGGGCAAGAACCCCACCATCGTGGAGGTGCTGG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGTGGGTCATGATGCGCTaGATGGCTTTGAGGACATCA +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWWVMMR*MALRTS
Trigger: TGATGTCCTCAAAGCCATCCAGCGCATCATGACCCA...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGGACGGACAGAGACCTaGCCCATCACACACACACAC +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTGRTET*PITHTH
Trigger: GTGTGTGTGTGTGATGGGCCAGGTCTCTGTCCGTCC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGGGGACCCTGCAGTCTaGGAGGCCACTAGGATTTCT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTGDPAV*EATRIS
Trigger: AGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACCTTCCCTGGGGAATTaGGGAGGCGTCTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGPSLGN*GGVSKA
Trigger: AGCTTTGGAGACGCCTCCCCAATTCCCCAGGGAAGG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCCTTCCCTGGGGAATTaGGGAGGCGTCTCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGPSLGN*GGVSKA
Trigger: AGCTTTGGAGACGCCTCCCCAATTCCCCAGGGAAGG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGTCCTGCCTTCTAGCCTaGAGTTGTGAAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWSCLLA*SCEAAC
Trigger: ACAAGCTGCTTCACAACTCCAGGCTAGAAGGCAGGA...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCTGAGCCTAACAATCTaGACTCCACTCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLSLTI*TPLWSL
Trigger: CAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAACAAAAGAAAGACACCTaGCTGTCTCACTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQQKKDT*LSHSRE
Trigger: TTCCCTGGAGTGAGACAGCCAGGTGTCTTTCTTTTG...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGGAGACTATGAAGGTTaGGGACAGCCAGAGAGTATG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWGDYEG*GQPESM
Trigger: CATACTCTCTGGCTGTCCCCAACCTTCATAGTCTCC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTCAAATCCCTGTTCATaGGGAACATCTATGTTGACT +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSNPCS*GTSMLT
Trigger: AGTCAACATAGATGTTCCCCATGAACAGGGATTTGA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGAGGGGTGTTGCCCCCTaGGGACATTGGGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVRGVAP*GHWAMS
Trigger: AGACATTGCCCAATGTCCCCAGGGGGCAACACCCCT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACCAGCTCAAGAGCACTaGATCTCAGTGAGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGPAQEH*ISVSLN
Trigger: ATTAAGACTCACTGAGATCCAGTGCTCTTGAGCTGG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCCCGGCACCGCTCTTTaGGCCTTCTGGAAAACCACT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTPGTAL*AFWKTT
Trigger: AGTGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCTTCTGTGTCACCATTaGGGAGGGGAGGCCCTTTAC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKLLCHH*GGEALY
Trigger: GTAAAGGGCCTCCCCTCCCCAATGGTGACACAGAAG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGACGTCCAACCCGACTaGTTTATGGGTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTDVQPD*FMGVGR
Trigger: CCTCCCCACACCCATAAACCAGTCGGGTTGGACGTC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618760.4
3UTR CAA 72 bp CATGTTCCAGTGGTTTCATGCACCCGTGAGTTGCCCTaGTCGGCAAGAGAGGGAGTGGGAACAGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: HVPVVSCTRELP*SAREGVGTEFC
Trigger: ACAAAACTCTGTTCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp TCTGGGCATGGCTGGACTTGGGAAGGATTCACCCTGTaGACTCCAGAGAAGCTGACTATCACATCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGHGWTWEGFTL*TPEKLTITSAL
Trigger: CAGAGCTGATGTGATAGTCAGCTTCTCTGGAGTCAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp CAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTaGGCAGAGATTAGCAGCATTGAGAGCTCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: QSFKEGAGAQGH*AEISSIESSEV
Trigger: TACCTCTGAGCTCTCAATGCTGCTAATCTCTGCCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGGGAGGAGATGCGTCTaGTGGCTGTGTCTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGGRRCV*WLCLEV
Trigger: CACTTCTAGACACAGCCATCAGACGCATCTCCTCCC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGGGAGGAGATGCGTCTaGTGGCTGTGTCTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVGRRCV*WLCLEV
Trigger: CACTTCTAGACACAGCCATCAGACGCATCTCCTCCC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGGGCAGAGGTTTGTGTaGCTTGCCGTCCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKGQRFV*LAVQIS
Trigger: AGAGATTTGGACGGCAAGTCACACAAACCTCTGCCC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGGCCTCCTTGCATGCTaGGAAGGATGCATGATGGAG +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVGLLAC*EGCMME
Trigger: CTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGTATGCATATCTCTGTaGACTGCACATTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSVCISL*TAHWLG
Trigger: ACCCAGCCAATGTGCAGTTCACAGAGATATGCATAC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTCAGCCCCAGGTCCTTaGACCACTCAAACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTSAPGP*TTQTWG
Trigger: ACCCCAAGTTTGAGTGGTTCAAGGACCTGGGGCTGA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGGGCTCTGGAGGTTTTaGCGGCTAAGGAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMGLWRF*RLRSRA
Trigger: TGCCCGGCTCCTTAGCCGTCAAAACCTCCAGAGCCC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCAGCCTGTATCCGGTTaGGCCAGGAGGAGCATACGC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGQPVSG*ARRSIR
Trigger: GCGTATGCTCCTCCTGGCTCAACCGGATACAGGCTG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCATCAGCAGCCATGGTaGCGTCCCCACAGACGTATA +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGHQQPW*RPHRRI
Trigger: TATACGTCTGTGGGGACGTCACCATGGCTGCTGATG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTAGAGGGCAACAAGCCTaGGGGACAAGTTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTRGQQA*GTSSSH
Trigger: GTGGGAAGAACTTGTCCCTCAGGCTTGTTGCCCTCT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTGCCCATTTTTGATCTaGGTTGAGGGTAACTTATTT +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWCPFLI*VEGNLF
Trigger: AAATAAGTTACCCTCAACTCAGATCAAAAATGGGCA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGCTACGAGGCCTGGATaGAAAGCCACCACGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGATRPG*KATTRG
Trigger: CCCTCTCGTGGTGGCTTTTCATCCAGGCCTCGTAGC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGAGGATGCAGTGAGCTaGGATCGTACCACTGTACGC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGEDAVS*DRTTVR
Trigger: GCGTACAGTGGTACGATCTCAGCTCACTGCATCCTC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCACAGACAGAAGGCTTTaGGGACATGGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLTDRRL*GHGGHS
Trigger: GCTGTGGCCACCATGTCCTCAAAGCCTTCTGTCTGT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGGGCATAGCCCCGCTTaGCCAGAACTGTTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLGHSPA*PELFGY
Trigger: ATACCCAAACAGTTCTGGTCAAGCGGGGCTATGCCC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGACATGGGAGGGGACTaGGACCCAGCTCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGDMGGD*DPAQEH
Trigger: GTGCTCTTGAGCTGGGTCTCAGTCCCCTCCCATGTC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCGAGGCCCCATCCACTaGCAGGGGCTGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLRGPIH*QGLFFA
Trigger: GGCAAAGAACAGCCCCTGGCAGTGGATGGGGCCTCG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCATATCTTTCATCTCTaGCTTGGCAGGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKHIFHL*LGRCPS
Trigger: GGAGGGGCACCTGCCAAGGCAGAGATGAAAGATATG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGGACGACAGGCACATTaGCCTTCCCCCATAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLGRQAH*PSPIGH
Trigger: ATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCGGGCATCGAATACCTaGAGCTTGGACCACTGGATC +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLRASNT*SLDHWI
Trigger: GATCCAGTGGTCCAAGCTGCAGGTATTCGATGCCCG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTCCCGTGGGCCGTGGTaGAGTCACGGGCATCGAATA +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSRGPW*SHGHRI
Trigger: TATTCGATGCCCGTGACTGCACCACGGCCCACGGGA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTCTTCCTTTCTTCCTaGACAGAGTTGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLFLSS*TELGCL
Trigger: GAGGCACCCCAACTCTGTGCAGGAAGAAAGGAAGAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317775.11
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTCCTGCAGGATGTCCTaGACGTACTTCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESCRMS*TYFFGL
Trigger: CAAACCAAAGAAGTACGTGCAGGACATCCTGCAGGA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTATATGTGGCCCCCTTaGTCCTTCAGGGCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVYMWPP*SFRARY
Trigger: GTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTTTGGGGAGGGGATTTaGACAATCCATTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSFGEGI*TIHWMG
Trigger: ACCCATCCAATGGATTGTGCAAATCCCCTCCCCAAA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAAGAGGAACTGTGTTTTaGTTATCTCTGCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGRGTVF*LSLQTA
Trigger: GGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTCAATTTATCTTACATaGTCCCTGTCCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHSIYLT*SLSVPF
Trigger: GAAAGGCACGGACAGGGAGCATGTAAGATAAATTGA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCAGCTCAACGGGCCATaGTCTGTACTGTGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVQLNGP*SVLWPE
Trigger: TTCTGGCCACAGTACAGAGCATGGCCCGTTGAGCTG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGGGACCACAGGAGCATaGCATCATGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKGTTGA*HHAQLI
Trigger: AATTAGCTGGGCATGATGGCATGCTCCTGTGGTCCC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGACTACAGGAAGCAGTaGATGGAGGCAGATTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWDYRKQ*MEADLF
Trigger: GAACAAATCTGCCTCCATGCACTGCTTCCTGTAGTC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGTCCTTCAAGGAAGGTaGTGGAGCACAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKVLQGR*WSTGTL
Trigger: AAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGAC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTACAGAAGAAGAGCATaGGACAAACACAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSYRRRA*DKHSLD
Trigger: GTCCAGGCTGTGTTTGTCGCATGCTCTTCTTCTGTA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCCCACTCATGGCTGGTaGCCCGTCGGTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGPTHGW*PVGGMI
Trigger: AATCATGCCACCGACGGGCCACCAGCCATGAGTGGG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGGAAGCGTGGACACTTaGAGGGGCTGCCATTCTTTG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTGSVDT*RGCHSL
Trigger: CAAAGAATGGCAGCCCCTCCAAGTGTCCACGCTTCC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTGCCGTCTGTCCTCTaGGGGAATATGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKLPSVL*GNMVMA
Trigger: TGCCATCACCATATTCCCCCAGAGGACAGACGGCAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAAGTGATGGTCAACAATaGTCACTTTGTCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGSDGQQ*SLCHSG
Trigger: TCCAGAGTGACAAAGTGACCATTGTTGACCATCACT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTTCCAGGGATCAGGCTaGTATTCGAAGGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVFQGSG*YSKEGV
Trigger: CACCCCCTCCTTCGAATACCAGCCTGATCCCTGGAA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATTCCAGGGATCAGGCTaGTATTCGAAGGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGFQGSG*YSKEGV
Trigger: CACCCCCTCCTTCGAATACCAGCCTGATCCCTGGAA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGAGACTCGCTTTTTGTaGACATTGGATAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVETRFL*TLDRPC
Trigger: ACAAGGTCTATCCAATGTCCACAAAAAGCGAGTCTC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGATCAGGGTACATGTCTaGGGAGGAGCTGATGGAATA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEIRVHV*GGADGI
Trigger: TATTCCATCAGCTCCTCCCCAGACATGTACCCTGAT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTTCATTCCTTTGTGTTaGATATCAAATTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWFIPLC*ISNCRC
Trigger: ACAGCGGCAATTTGATATCCAACACAAAGGAATGAA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCCACAGACGTATATGTaGCCCCCTTGCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGPQTYM*PPCSFR
Trigger: CCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCGGCAAGAGAGGGAGTaGGAACAGAGTTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIRQERE*EQSFVR
Trigger: TCTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGACGGCCATGTTCCAGTaGTTTCATGCACCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKTAMFQ*FHAPVS
Trigger: ACTCACGGGTGCATGAAACCACTGGAACATGGCCGT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCACGAGGGATTAATATaGGCCAGGGACACGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWHEGLI*ARDTFL
Trigger: AAGAAACGTGTCCCTGGCCCATATTAATCCCTCGTG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCACGAGGGATTAATATaGGCCAGGGACACGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSHEGLI*ARDTFL
Trigger: AAGAAACGTGTCCCTGGCCCATATTAATCCCTCGTG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCAGGTACATGGGCGTaGACCCTAATTATGGACACA +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSGTWA*TLIMDT
Trigger: TGTGTCCATAATTAGGGTCCACGCCCATGTACCTGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTCAGGTACATGGGCGTaGACCCTAATTATGGACACA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESGTWA*TLIMDT
Trigger: TGTGTCCATAATTAGGGTCCACGCCCATGTACCTGA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGAATGCCTCTTTCATTaGGAGACAGCCCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQECLFH*ETAPLI
Trigger: GATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTCAAGTGATTCTAGCTaGTATGGGTGGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESSDSS*YGWVWG
Trigger: TCCCCAAACCCACCCATACCAGCTAGAATCACTTGA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGATCGAAGAAGCCACGTaGGACCTCATTATGGCAACT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWIEEAT*DLIMAT
Trigger: AGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGAT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGACAGGTTTAAAACTTTaGAGATCAACTGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVTGLKL*RSTAEG
Trigger: GCCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTTCCCTTTCCATCCTTaGGGACCCTGCAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRFPFHP*GPCSLG
Trigger: TCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCACTTTAACAGTCTCCTaGCCTGGGCCCTTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGTLTVS*PGPFGV
Trigger: GACCCCAAAGGGCCCAGGCCAGGAGACTGTTAAAGT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCAAAAGAAAGACACCTaGCTGTCTCACTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEQKKDT*LSHSRE
Trigger: TTCCCTGGAGTGAGACAGCCAGGTGTCTTTCTTTTG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTGTAATCCAGCACTTTaGGAGGCTGAGGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCCNPAL*EAEVRG
Trigger: TCCACGCACCTCAGCCTCCCAAAGTGCTGGATTACA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGGGCATGGCTGGACTTaGGAAGGATTCACCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRGHGWT*EGFTLL
Trigger: CAACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCCAATGTCTACTGGCTaGGGGTCAGTTTTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRPMSTG*GSVFPP
Trigger: CGGAGGGAAAACTGACCCCCAGCCAGTAGACATTGG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGTCGCCTCAAACTCCTaGGACCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTVASNS*DQVILL
Trigger: CAGGAGGATCACTTGGTCCCAGGAGTTTGAGGCGAC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGACAGGAAGCAGTGCATaGAGGCAGATTTGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKTGSSA*RQICSR
Trigger: GCGGGAACAAATCTGCCTCCATGCACTGCTTCCTGT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAATGGAAACAACCACTaGGCTAGGCAAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQNGNNH*ARQSFC
Trigger: GCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCATTCTGTCAACAAGCTaGAGTGCAGTGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSILSTS*SAVVPS
Trigger: AGATGGCACCACTGCACTCCAGCTTGTTGACAGAAT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAACGGACACTGCGACGTaGGGTGCCCGGCACCGCTCT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKTDTAT*GARHRS
Trigger: AGAGCGGTGCCGGGCACCCCACGTCGCAGTGTCCGT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGCGACAAACACAGCCTaGACAACCTCGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGATNTA*TTSQRA
Trigger: CGCTCTTTGCGAGGTTGTCCAGGCTGTGTTTGTCGC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGCTGCAGCCAGACCGTaGACTTCTGTGTCACCATTG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGAAARP*TSVSPL
Trigger: CAATGGTGACACAGAAGTCCACGGTCTGGCTGCAGC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAGAGACGAACAGAAATaGCATTGGGCTGGATTTGCT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWERDEQK*HWAGFA
Trigger: AGCAAATCCAGCCCAATGTCATTTCTGTTCGTCTCT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTCACGGGCGGCTTACTaGCCCGCTCCTTCACCAGAA +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSSRAAY*PAPSPE
Trigger: TTCTGGTGAAGGAGCGGGTCAGTAAGCCGCCCGTGA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGGGCAGAGGTTTGTGTaGCTTGCCGTCCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLGQRFV*LAVQIS
Trigger: AGAGATTTGGACGGCAAGTCACACAAACCTCTGCCC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGGGCTGCTCCTTCTCTaGATATGGGTTGTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRGLLLL*IWVVED
Trigger: GTCCTCAACAACCCATATTCAGAGAAGGAGCAGCCC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGGTGGAGGGTGTCAGTaGGAACCACCTCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMGGGCQ*EPPQSP
Trigger: GGGAGACTGAGGTGGTTCTCACTGACACCCTCCACC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCTTCGGCCACAAAGGTaGGGCGGAACTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVLRPQR*GGTCFS
Trigger: AGAGAAACAAGTTCCGCCTCACCTTTGTGGCCGAAG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTGGATAGACCTTGTGTaGGTTCTGGAGCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRWIDLV*VLELRP
Trigger: TGGCCGAAGCTCCAGAACTCACACAAGGTCTATCCA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTGGATAGACCTTGTGTaGGTTCTGGAGCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTWIDLV*VLELRP
Trigger: TGGCCGAAGCTCCAGAACTCACACAAGGTCTATCCA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTGTCCAGGTAGTACTTaGAGGCCTGGAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVCPGST*RPGRWC
Trigger: GCACCATCTTCCAGGCCTTCAAGTACTACCTGGACA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCCTGCAAACCCTTGCTaGGGACCAGCAGACGCTGCT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLPANPC*GPADAA
Trigger: AGCAGCGTCTGCTGGTCCTCAGCAAGGGTTTGCAGG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGAGCATACGCCGTGGTaGATTGGTCCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGEHTPW*IGPSPS
Trigger: AGATGGAGAAGGACCAATTCACCACGGCGTATGCTC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGGTCCAGTTAGGAGCTaGAAACCTCATCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKGPVRS*KPHRCL
Trigger: AAGACACCGATGAGGTTTTCAGCTCCTAACTGGACC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGTTCGTATGACATTATaGCTAGGAAAAACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHVRMTL*LGKTED
Trigger: GTCCTCAGTTTTTCCTAGTCATAATGTCATACGAAC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAGGAATTCTGGCAAATaGAAGAAACACATCAGATCG +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVRNSGK*KKHIRS
Trigger: CGATCTGATGTGTTTCTTTCATTTGCCAGAATTCCT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCCAAACTCACTTTTGTaGAATGGGGCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCPNSLL*NGAGAA
Trigger: AGCAGCTCCAGCCCCATTTCACAAAAGTGAGTTTGG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAAGAGCAGGCAGCTGCTaGAAGCGTGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGRAGSC*KRVWSE
Trigger: TTCTGACCAAACACGCTTTCAGCAGCTGCCTGCTCT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGACACAGTGTCTTATTaGAACAGACTGCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSDTVSY*NRLPSS
Trigger: AGAGGATGGCAGTCTGTTTCAATAAGACACTGTGTC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCTGGAAAACCACTGCTaGGCCAGGAGTGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTLENHC*ARSVSL
Trigger: AAGACTCACACTCCTGGCTCAGCAGTGGTTTTCCAG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCATATCTTTCATCTCTaGCTTGGCAGGTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLHIFHL*LGRCPS
Trigger: GGAGGGGCACCTGCCAAGGCAGAGATGAAAGATATG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTCCCGTGGGCCGTGGTaGAGTCACGGGCATCGAATA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSRGPW*SHGHRI
Trigger: TATTCGATGCCCGTGACTGCACCACGGCCCACGGGA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGGCGGTTTCCAGCCCTaGTGTATGCATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVGGFQP*CMHISV
Trigger: CACAGAGATATGCATACAGCAGGGCTGGAAACCGCC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCATAAGCTTGCGATTTaGCTGTCTCTGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWHKLAI*LSLWHR
Trigger: TCTATGCCACAGAGACAGGCAAATCGCAAGCTTATG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATACGCCGGCGTCCTCTaGCGAGAGCTTCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKYAGVL*RELPLL
Trigger: CAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGTTCCAGTGGTTTCATaGACCCGTGAGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTVPVVS*TRELPL
Trigger: CAAGGGCAACTCACGGGTGCATGAAACCACTGGAAC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCCACTCCTCTCCCCATaGCCTGAACCCTTTCTAACT +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRPLLSP*PEPFLT
Trigger: AGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTGGGAAGATCCTTATTaGCACCAGGCTTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEWEDPY*HQASLN
Trigger: GTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACTGAACAACAAGATATaGCCACGTACAGTATATAAA +
Preference number: 4 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLLNNKI*PRTVYK
Trigger: TTTATATACTGTACGTGGGCATATCTTGTTGTTCAG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAAAATGGGGCTGGAGCTaGTACTGGTCAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGKWGWS*YWSIQG
Trigger: CCCCTGAATTGACCAGTAGCAGCTCCAGCCCCATTT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCCGCCCACAGCCATCTaGACCAACAGGGGCAGAATT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGPPTAI*TNRGRI
Trigger: AATTCTGCCCCTGTTGGTGCAGATGGCTGTGGGCGG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCAGGCATGAACCACCATaGCTGGCCTACTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSRHEPP*LAYFLS
Trigger: GCTCAAAAAGTAGGCCAGGCATGGTGGTTCATGCCT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGAGATTGCGCTGTGTTaGCCAAGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKEIALC*PSWSQT
Trigger: AGTTTGAGACCAGCTTGGGCAACACAGCGCAATCTC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGTCCTTCAAGGAAGGTaGTGGAGCACAGGGACACTT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTVLQGR*WSTGTL
Trigger: AAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGAC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGATCCACGGCTTTGGTaGGGGGACCCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKDPRLW*GDPGAV
Trigger: CACAGCCCCTGGGTCCCCCCACCAAAGCCGTGGATC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGGCTGCCATTCTTTGTaGGGGACTGTTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTGCHSL*GTVFLR
Trigger: CCTCAGGAAAACAGTCCCCCACAAAGAATGGCAGCC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCAGCTCTGGAGGAATCTaGAAGAGCTCAGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSSSGGI*KSSGSL
Trigger: CAATGACCCTGAGCTCTTCCAGATTCCTCCAGAGCT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTGTCATATTCTTCCATaGACATCACCTTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVCHILP*TSPWHQ
Trigger: TTGATGCCAAGGTGATGTCCATGGAAGAATATGACA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATGGCTCCCGTTGGTGTaGAGACGCACGAAGATAGTT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGWLPLV*RRTKIV
Trigger: AACTATCTTCGTGCGTCTCCACACCAACGGGAGCCA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTGGCTCCCGTTGGTGTaGAGACGCACGAAGATAGTT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVWLPLV*RRTKIV
Trigger: AACTATCTTCGTGCGTCTCCACACCAACGGGAGCCA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTGGTACTGCAGCTCCTaGCTCCCGTTGGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGWYCSS*LPLVWR
Trigger: TCTCCACACCAACGGGAGCCAGGAGCTGCAGTACCA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAGGGTGGCCGGCATCTaGATAGATGGGAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGRVAGI*IDGNSS
Trigger: GGAGGAGTTCCCATCTATCCAGATGCCGGCCACCCT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCTTCTTTGGTTTGTCTaGCTCCCGGGAGTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVLLWFV*LPGVSR
Trigger: ACGGCTTACTCCCGGGAGCCAGACAAACCAAAGAAG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCTGCACGTACTTCTTTaGTTTGTCTGGCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRLHVLL*FVWLPG
Trigger: TCCCGGGAGCCAGACAAACCAAAGAAGTACGTGCAG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGAAATGCAGCAAATTCTaGGAATGCCTCTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVKCSKF*ECLFHW
Trigger: CCAATGAAAGAGGCATTCCCAGAATTTGCTGCATTT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGAGGGCTCTGCTCACTaGTATCAAAATCTAAATGCA +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQEGSAH*YQNLNA
Trigger: TGCATTTAGATTTTGATACCAGTGAGCAGAGCCCTC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGTCAGTCAATGGATGTaGCAAAGTCAAGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: PVVSCTRELPLSAREGVGVSQWM*QSQVIL
Trigger: TAGAATCACTTGACTTTGCCACATCCATTGACTGAC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGTCAGTCAATGGATGTaGCAAAGTCAAGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVVSQWM*QSQVIL
Trigger: TAGAATCACTTGACTTTGCCACATCCATTGACTGAC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTGGATGCTATTGCTaGAGGAGGGGGTCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLGCYC*RRGSVN
Trigger: ATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAACTTCCAGGCCCCTTaGATGCTATTGCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRNFQAP*MLLLEE
Trigger: CTCCTCCAGCAATAGCATCCAAGGGGCCTGGAAGTT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCCCACCCCAAGTTGTaGCTCCTATCGAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSHPKL*LLSKKP
Trigger: TGGCTTCTTCGATAGGAGCCACAACTTGGGGTGGGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAGAGAGAGAGGCTTTTaGTATCAGGAATTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQRERGF*YQEFWQ
Trigger: TTGCCAGAATTCCTGATACCAAAAGCCTCTCTCTCT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGACTCTTCCCAATTCCTaGACAACTCTTACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWTLPNS*TTLTFQ
Trigger: CTGGAAGGTAAGAGTTGTCCAGGAATTGGGAAGAGT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCACCCTCTACAATGGATaGGGTGCCAGGTACGCTGAT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGTLYNG*GARYAD
Trigger: ATCAGCGTACCTGGCACCCCATCCATTGTAGAGGGT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTTAGCCAATGTCTACTaGCTGGGGGTCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLANVY*LGVSFP
Trigger: GGGAAAACTGACCCCCAGCCAGTAGACATTGGCTAA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTAGCCAATGTCTACTaGCTGGGGGTCAGTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKLANVY*LGVSFP
Trigger: GGGAAAACTGACCCCCAGCCAGTAGACATTGGCTAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGGCAGGGACTGGCAGTaGGCCAAGGATAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLGRDWQ*AKDREC
Trigger: ACACTCCCTATCCTTGGCCCACTGCCAGTCCCTGCC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGCTACAGGTATCTTGTaGATGGAGGCCAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKATGIL*MEARNA
Trigger: AGCATTCCTGGCCTCCATCCACAAGATACCTGTAGC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp TTCAATGAAAGCAGTGGCAATCTAAGATCGACACACTaGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FNESSGNLRSTH*CREEDGQRPGP
Trigger: TGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGATTGCCACTGCTTTCATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp CTAAAAGACTACAGGAAGCAGTGCATGGAGGCAGATTaGTTCCCGCCTGCCAGGGCCATCTCGTTAATAACG +
Preference number: 4 (lower is better)
Translates to: LKDYRKQCMEAD*FPPARAISLIT
Trigger: CGTTATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCTGCCTCCATGCACTGCTTCCTGTAGTCTTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp CCCCCTGGGGACATTGGGCAATGTCTGATGACATACTaGATTGTTACCGTTGGCAGGACACTGCTACAGGTA +
Preference number: 4 (lower is better)
Translates to: PPGDIGQCLMTY*IVTVGRTLLQV
Trigger: TACCTGTAGCAGTGTCCTGCCAACGGTAACAATCAAGTATGTCATCAGACATTGCCCAATGTCCCCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGCTATCAGGCCAAGATaGTTTCACCAGGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTAIRPR*FHQEDP
Trigger: TGGATCCTCCTGGTGAAATCATCTTGGCCTGATAGC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACAGGGCCCCTCAGAATaGGGACCACGTGGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKQGPSE*GPRGSQ
Trigger: CTGAGACCCACGTGGTCCTCATTCTGAGGGGCCCTG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCAGGCTCTATCTCCTTaGGCAGTTCATTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVQALSP*AVHCSP
Trigger: GGGAGAACAATGAACTGCTCAAGGAGATAGAGCCTG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGCTGAATATGGGTTGTTaGGGACGACAGGCACATTGC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRLNMGC*GRQAHC
Trigger: GCAATGTGCCTGTCGTCCTCAACAACCCATATTCAG...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCGTACGTTCGCAGGGTaGCTCCAAAAATATCCTCAT +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCRTFAG*LQKYPH
Trigger: ATGAGGATATTTTTGGAGTCACCCTGCGAACGTACG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTTTTGCTCTCTTCAATaGAGGCAATGGACTCAGATC +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEFCSLQ*RQWTQI
Trigger: GATCTGAGTCCATTGCCTTCATTGAAGAGAGCAAAA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAGCAGACACCCAAACTaGACAACAAGATATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSRHPN*TTRYAH
Trigger: GTGGGCATATCTTGTTGTTCAGTTTGGGTGTCTGCT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTTCCTGCATAAAGCTTaGCTTGGAGTGGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCFLHKA*LGVGST
Trigger: AGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAGGAATTCTGGCAAATaGAAGAAACACATCAGATCG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQRNSGK*KKHIRS
Trigger: CGATCTGATGTGTTTCTTTCATTTGCCAGAATTCCT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCTCCACTCTGGTCCTTaGGAGGTTACTCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLLHSGP*EVTQQR
Trigger: TCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTCCAGAAGCTACCAGTaGAATCCCGCCCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTSRSYQ*NPAHFS
Trigger: TGAGAAATGGGCGGGATTTCACTGGTAGCTTCTGGA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAACTCATCTTTTCCCTaGGCCTGCTCTTCAGAGACC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRNSSFP*ACSSET
Trigger: GGTCTCTGAAGAGCAGGCTCAGGGAAAAGATGAGTT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGGACCATTTGCCCTATaGGCTAGGTCAGGACACCTC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGGPFAL*ARSGHL
Trigger: GAGGTGTCCTGACCTAGCTCATAGGGCAAATGGTCC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGGACGGCCGAGTTTCTaGCAGCGTGTGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLGRPSF*QRVCVC
Trigger: ACACACACACACACGCTGTCAGAAACTCGGCCGTCC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTGCCAGCCTGTTAGATaGGGATCAGATCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLCQPVR*GSDLRH
Trigger: ATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTGCCAGCCTGTTAGATaGGGATCAGATCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRCQPVR*GSDLRH
Trigger: ATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGGTGGCATGATTTCCTaGATCCGCCTCTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGGGMIS*IRLSPY
Trigger: ATAAGGAGAGAGGCGGATGCAGGAAATCATGCCACC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCTGAAGACCTCACAATaGTATCAGGCCAAGATGATT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWELKTSQ*YQAKMI
Trigger: AATCATCTTGGCCTGATAGCATTGTGAGGTCTTCAG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGAGGCTGACTCTGGTTaGTTTCTTCGCGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLEADSG*FLRGVL
Trigger: CAGGACCCCGCGAAGAAAGCAACCAGAGTCAGCCTC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGACACTTGGAGGGGCTaGCATTCTTTGTGGGGGACT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGDTWRG*HSLWGT
Trigger: AGTCCCCCACAAAGAATGGCAGCCCCTCCAAGTGTC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAGAGCTGTCCTTTTGTaGGGACGTCTTCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGRAVLL*GRLQAS
Trigger: GGAGGCCTGAAGACGTCCGCACAAAAGGACAGCTCT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCAGACTCGGAAGTCGTaGTTGCCGTCTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSQTRKS*LPSVLW
Trigger: CCAGAGGACAGACGGCAAGCACGACTTCCGAGTCTG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCAGACTCGGAAGTCGTaGTTGCCGTCTGTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLQTRKS*LPSVLW
Trigger: CCAGAGGACAGACGGCAAGCACGACTTCCGAGTCTG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCACTCAAACTTGGGGTaGCTGATGGGAACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTHSNLG*LMGTSN
Trigger: GTTGGAAGTTCCCATCAGGCACCCCAAGTTTGAGTG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTGCACAGAGTTGGGGTaGCTCATTTCCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSCTELG*LISIKA
Trigger: TGCTTTGATGGAAATGAGGCACCCCAACTCTGTGCA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTCAAATTGCCGCTGTTaGCAGAAGCTTCGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTSNCRC*QKLRKG
Trigger: CCCTTTCCGAAGCTTCTGGCAACAGCGGCAATTTGA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCAAATTGCCGCTGTTaGCAGAAGCTTCGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSNCRC*QKLRKG
Trigger: CCCTTTCCGAAGCTTCTGGCAACAGCGGCAATTTGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTCCTGCAGGATGTCCTaGACGTACTTCTTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSSCRMS*TYFFGL
Trigger: CAAACCAAAGAAGTACGTGCAGGACATCCTGCAGGA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGCCGAGAGCTTCCCCTaGTGGGTCATGATGCGCTGG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKAESFP*WVMMRW
Trigger: CCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTTCAAAGAGGGCCAGTaGACTTCCTCTTTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSFKEGQ*TSSLAD
Trigger: GTCTGCTAAAGAGGAAGTGCACTGGCCCTCTTTGAA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAATGGAAAAGCATTCCTaGATAAAGCTTGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQMEKHS*IKLDLE
Trigger: CTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCAT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAACTCTCGACAGACACTaGTTTCCACGGGTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGTLDRH*FPRVKV
Trigger: CACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCACTCTCGACAGACACTaGTTTCCACGGGTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGTLDRH*FPRVKV
Trigger: CACTTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAGATTTGTTCCCGCCTaGCAGGGCCATCTCGTTAAT +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRRFVPA*QGHLVN
Trigger: ATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGAGATTTGTTCCCGCCTaGCAGGGCCATCTCGTTAAT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVRFVPA*QGHLVN
Trigger: ATTAACGAGATGGCCCTGGCAGGCGGGAACAAATCT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGCTAGGCAAAGTTTCTaGTGCGTGCTCCAGGAAATC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGARQSF*CVLQEI
Trigger: GATTTCCTGGAGCACGCAGCAGAAACTTTGCCTAGC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCTTATTGAAACAGACTaGCATCCTCTGTTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWELIETD*HPLFWH
Trigger: ATGCCAGAACAGAGGATGGCAGTCTGTTTCAATAAG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTACTTCCTTTCTTCCTaGACAGAGTTGGGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGYFLSS*TELGCL
Trigger: GAGGCACCCCAACTCTGTGCAGGAAGAAAGGAAGTA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTTCTCCCCTCTGCCTTaGAGGCTGACTCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGFSPLP*RLTLVA
Trigger: AGCAACCAGAGTCAGCCTCCAAGGCAGAGGGGAGAA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTCCAGCCTTTCCATGTaGGCTTTGGAGCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSSSLSM*ALEPNL
Trigger: AAGATTTGGCTCCAAAGCCCACATGGAAAGGCTGGA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTTCCAACACCAGCTCTaGAGGAATCTGGAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRFQHQL*RNLEEL
Trigger: GAGCTCTTCCAGATTCCTCCAGAGCTGGTGTTGGAA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAGTGATGGTCAACAATaGTCACTTTGTCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESDGQQ*SLCHSG
Trigger: TCCAGAGTGACAAAGTGACCATTGTTGACCATCACT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTTCACGAGGTCCTCGTaGTTGCCAGGGAAGACACCC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLFTRSS*LPGKTP
Trigger: GGGTGTCTTCCCTGGCAACCACGAGGACCTCGTGAA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTCCACTTTCACCATCTaGTTGACAGGCGGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSTFTI*LTGGAS
Trigger: GGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCTGCAGAGGCGTTGGTaGCGTGGTGATGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSLQRRW*RGDVQV
Trigger: TACCTGGACATCACCACGCCACCAACGCCTCTGCAG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTGGGTCATGATGCGCTaGATGGCTTTGAGGACATCA +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGWVMMR*MALRTS
Trigger: TGATGTCCTCAAAGCCATCCAGCGCATCATGACCCA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGAGAGCTTCCCCTGCTaGGTCATGATGCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLESFPC*VMMRWM
Trigger: CATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGGACGGACAGAGACCTaGCCCATCACACACACACAC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLGRTET*PITHTH
Trigger: GTGTGTGTGTGTGATGGGCCAGGTCTCTGTCCGTCC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTGGTATGGGTGGGTTTaGGGAGGGGATTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLWYGWV*GGDLHN
Trigger: ATTGTGCAAATCCCCTCCCCAAACCCACCCATACCA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGTCTTTAATGGGGATTaGACACAACAGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIVFNGD*TQQFPS
Trigger: GGAAGGAAACTGTTGTGTCCAATCCCCATTAAAGAC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTTGCACTTAAACGGTTaGCTACGAGGCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKLHLNG*LRGLDE
Trigger: TTCATCCAGGCCTCGTAGCCAACCGTTTAAGTGCAA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTTGCACTTAAACGGTTaGCTACGAGGCCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLHLNG*LRGLDE
Trigger: TTCATCCAGGCCTCGTAGCCAACCGTTTAAGTGCAA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGAAGAGGGAAATAAATaGGCCATAACCCGAATAACC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIEEGNK*AITRIT
Trigger: GGTTATTCGGGTTATGGCCCATTTATTTCCCTCTTC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGAGGCCAGGCCAGGTTaGCCTCCAAAGTCAAATCCC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMEARPG*PPKSNP
Trigger: GGGATTTGACTTTGGAGGCCAACCTGGCCTGGCCTC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGGCACTTCGATGTCCTaGAGTTACTTTCTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWGTSMS*SYFLKD
Trigger: GTCTTTTAGAAAGTAACTCCAGGACATCGAAGTGCC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGAGCACAGGGACACTTaGCAGAGATTAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGEHRDT*QRLAAL
Trigger: CAATGCTGCTAATCTCTGCCAAGTGTCCCTGTGCTC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGCAAAGAGCGTGGGGTaGGCGTCAGTCCTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSAKSVG*ASVLQG
Trigger: TCCTTGAAGGACTGACGCCCACCCCACGCTCTTTGC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGCAAAGAGCGTGGGGTaGGCGTCAGTCCTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMAKSVG*ASVLQG
Trigger: TCCTTGAAGGACTGACGCCCACCCCACGCTCTTTGC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTATTCTCTAAGGAAGTaGTGGTTGACCAGGCAGACG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTYSLRK*WLTRQT
Trigger: CGTCTGCCTGGTCAACCATCACTTCCTTAGAGAATA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGGTTACAGATGTAGTTaGACATCCCGTGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSGYRCS*TSRGPW
Trigger: CCACGGCCCACGGGATGTTCAACTACATCTGTAACC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCATCAAAGGCGTGTTTaGAGATCTCACACAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKHQRRV*RSHTRS
Trigger: AGACCTTGTGTGAGATCTTCAAACACGCCTTTGATG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACGTACGTTCGCAGGGTaGCTCCAAAAATATCCTCAT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGRTFAG*LQKYPH
Trigger: ATGAGGATATTTTTGGAGTCACCCTGCGAACGTACG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGCAGACACCCAAACTaGACAACAAGATATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGSRHPN*TTRYAH
Trigger: GTGGGCATATCTTGTTGTTCAGTTTGGGTGTCTGCT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCAAATGCAGTAAGTTTTaGACCAGGTACTGTAACTGG +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIKCSKF*TRYCNW
Trigger: CCAGTTACAGTACCTGGTTCAAAACTTACTGCATTT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCTGGTCTCCAACTCCTaGCCTCAACTGATACACCCA +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGLVSNS*PQLIHP
Trigger: TGGGTGTATCAGTTGAGGTCAGGAGTTGGAGACCAG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCTCAGACTACATTCCTaGTACAGACAGAAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLRLHS*YRQKAL
Trigger: CAAAGCCTTCTGTCTGTATCAGGAATGTAGTCTGAG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGGATGCAGGAGACTATaGAGGTTGGGGACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMGCRRL*RLGTAR
Trigger: TCTGGCTGTCCCCAACCTTCATAGTCTCCTGCATCC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGGCATATTGACAGCTaGCCACCTCCCTCGCACATG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMRHIDS*PPPSHM
Trigger: CATGTGCGAGGGAGGTGGTCAGCTGTCAATATGCCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCAGCACTGGATCTCAGTaGGTCTTAATCAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCSTGSQ*VLIRTN
Trigger: GTTGGTTCTGATTAAGACTCACTGAGATCCAGTGCT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGAAGGTGGTCTCCAGGTaGGTGGTGAAACCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLKVVSR*VVKPSG
Trigger: CCCTGAAGGTTTCACCACGCACCTGGAGACCACCTT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGAGGTTTGTGTGACTTaGCGTCCAAATCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVEVCVT*RPNLCP
Trigger: TGGACAGAGATTTGGACGGCAAGTCACACAAACCTC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGAGAGCTCAGGGTCATTaGCGTTGGCCTGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLRAQGH*RWPEAG
Trigger: TCCTGCTTCAGGCCAACGGCAATGACCCTGAGCTCT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGAGCTCAGGGTCATTaGCGTTGGCCTGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMRAQGH*RWPEAG
Trigger: TCCTGCTTCAGGCCAACGGCAATGACCCTGAGCTCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACTCTTGGCCATAGCCTaGCCCATCAGCTTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKLLAIA*PISLAE
Trigger: CTCGGCCAAGCTGATGGGGCAGGCTATGGCCAAGAG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCATAAGCTTGCGATTTaGCTGTCTCTGTGGCATAGA +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSHKLAI*LSLWHR
Trigger: TCTATGCCACAGAGACAGGCAAATCGCAAGCTTATG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTGCACAGAGTTGGGGTaGCTCATTTCCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGCTELG*LISIKA
Trigger: TGCTTTGATGGAAATGAGGCACCCCAACTCTGTGCA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATCCAGGCCCCTTGGATaGTATTGCTGGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSRPLG*YCWRRG
Trigger: CCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTGGA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCTGAACAACAAGATATaGCCACGTACAGTATATAAA +
Preference number: 4 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVLNNKI*PRTVYK
Trigger: TTTATATACTGTACGTGGGCATATCTTGTTGTTCAG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCCTTTGGGGTCTTGGTaGCCCCACTGTAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLPLGSW*PHCKAL
Trigger: AAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAAATGGGGCTGGAGCTaGTACTGGTCAATTCAGGGG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGKWGWS*YWSIQG
Trigger: CCCCTGAATTGACCAGTAGCAGCTCCAGCCCCATTT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCATGCTCCCTGTCCGTaGCTTTCCTCTCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSHAPCP*LSSHSS
Trigger: GGAAGAGTGAGAGGAAAGGCACGGACAGGGAGCATG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGGCCCAGCCTGCAAGATaGTTTAATTTCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWAQPAR*FNFSFI
Trigger: AATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGC...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCCACTCATGGCTGGTaGCCCGTCGGTGGCATGATT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPTHGW*PVGGMI
Trigger: AATCATGCCACCGACGGGCCACCAGCCATGAGTGGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATGCAGCTTGGACCACTaGATCCTGCCCACACAGCGC +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKCSLDH*ILPTQR
Trigger: GCGCTGTGTGGGCAGGATCCAGTGGTCCAAGCTGCA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCTGAGAACCTCACATTaGCCAGGGGTCCAGCACTCT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMLRTSH*PGVQHS
Trigger: AGAGTGCTGGACCCCTGGCCAATGTGAGGTTCTCAG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTATCAGGGTACATGTCTaGGGAGGAGCTGATGGAATA +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTIRVHV*GGADGI
Trigger: TATTCCATCAGCTCCTCCCCAGACATGTACCCTGAT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCGAAGACCAGGACCATaGGGCAGGGGTTCATTCCTT +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSRRPGP*GRGSFL
Trigger: AAGGAATGAACCCCTGCCCCATGGTCCTGGTCTTCG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTCCAAAGTCATCCAGTaGCAAAGTGGGAAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSKVIQ*QSGKIL
Trigger: AAGGATCTTCCCACTTTGCCACTGGATGACTTTGGA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCATCGAAGAAGCCACGTaGGACCTCATTATGGCAACT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLIEEAT*DLIMAT
Trigger: AGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGAT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAAGTCAAGCTCCATGTaGCAGGAACAGGACACCGGT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGKSSSM*QEQDTG
Trigger: ACCGGTGTCCTGTTCCTGCCACATGGAGCTTGACTT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCCAATGTCTACTGGCTaGGGGTCAGTTTTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLPMSTG*GSVFPP
Trigger: CGGAGGGAAAACTGACCCCCAGCCAGTAGACATTGG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCTCCTTGTTGCTTCCTaGCAGTCTCAGACTACATTC +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTLLVAS*QSQTTF
Trigger: GAATGTAGTCTGAGACTGCCAGGAAGCAACAAGGAG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCACAAGGCAGGGACTaGCAGTGGGCCAAGGATAGG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPQGRD*QWAKDR
Trigger: CCTATCCTTGGCCCACTGCCAGTCCCTGCCTTGTGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTATAATGAGAAGTCCTaGGGTAGCCAGCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCYNEKS*GSQQRF
Trigger: GAATCTCTGCTGGCTACCCCAGGACTTCTCATTATA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCAATGGAAACAACCACTaGGCTAGGCAAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSNGNNH*ARQSFC
Trigger: GCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCATTCTGTCAACAAGCTaGAGTGCAGTGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGILSTS*SAVVPS
Trigger: AGATGGCACCACTGCACTCCAGCTTGTTGACAGAAT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGCGACAAACACAGCCTaGACAACCTCGCAAAGAGCG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMATNTA*TTSQRA
Trigger: CGCTCTTTGCGAGGTTGTCCAGGCTGTGTTTGTCGC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp GATCTGAGCCTAACAATCTGGACTCCACTCTGGTCCTaGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: DLSLTIWTPLWS*RGYSTEREAFG
Trigger: ACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGATTGTTAGGCTCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGCTATCAGGCCAAGATaGTTTCACCAGGAGGATCCA +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGAIRPR*FHQEDP
Trigger: TGGATCCTCCTGGTGAAATCATCTTGGCCTGATAGC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTCCCCCATAGGTCATTaGAGACTCGGTCGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLSPIGH*RLGRSP
Trigger: TGGAGAACGACCGAGTCTTCAATGACCTATGGGGGA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCAAACTTGGGGTGCCTaGTGGGAACTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLQTWGA*WELPTP
Trigger: TGGTGTTGGAAGTTCCCATCAGGCACCCCAAGTTTG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACATCAAAGGCGTGTTTaGAGATCTCACACAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGHQRRV*RSHTRS
Trigger: AGACCTTGTGTGAGATCTTCAAACACGCCTTTGATG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTGCCAAAGGTGCTGGTaGCCACAAGGACCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLCQRCW*PQGPEF
Trigger: AAACTCTGGTCCTTGTGGTCACCAGCACCTTTGGCA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGACGCACGAAGATAGTTaGCCGACTGGATTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGTHEDS*PTGFRA
Trigger: AGCCCTAAATCCAGTCGGTCAACTATCTTCGTGCGT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTGTCCAGGTAGTACTTaGAGGCCTGGAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSCPGST*RPGRWC
Trigger: GCACCATCTTCCAGGCCTTCAAGTACTACCTGGACA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAAACGATGGCCACAGTaGGGTGCACTTCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMKRWPQ*GALHQG
Trigger: ACCCTGATGAAGTGCACCTCACTGTGGCCATCGTTT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTTTTGCTCTCTTCAATaGAGGCAATGGACTCAGATC +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSFCSLQ*RQWTQI
Trigger: GATCTGAGTCCATTGCCTTCATTGAAGAGAGCAAAA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGGTCCAGTTAGGAGCTaGAAACCTCATCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGGPVRS*KPHRCL
Trigger: AAGACACCGATGAGGTTTTCAGCTCCTAACTGGACC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCATTGAGGGTCTTCAATaGAAGCAGTGGCAATCTAAG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSIEGLQ*KQWQSK
Trigger: CTTAGATTGCCACTGCTTTCATTGAAGACCCTCAAT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCACGTTTCTTGGCATTaGGGGTCTTCAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGHVSWH*GSSMKA
Trigger: TGCTTTCATTGAAGACCCTCAATGCCAAGAAACGTG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTAAAACTGAGGACAAGTaGCCCATCCAAAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTKTEDK*PIQSHP
Trigger: TGGATGACTTTGGATGGGTCACTTGTCCTCAGTTTT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGATATCTGTGGAAGAGTaGGCAGGGGAAATTGGGATT +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRISVEE*AGEIGI
Trigger: AATCCCAATTTCCCCTGCTCACTCTTCCACAGATAT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAATATCTGTGGAAGAGTaGGCAGGGGAAATTGGGATT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGISVEE*AGEIGI
Trigger: AATCCCAATTTCCCCTGCTCACTCTTCCACAGATAT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCCAAACTCACTTTTGTaGAATGGGGCTGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGPNSLL*NGAGAA
Trigger: AGCAGCTCCAGCCCCATTTCACAAAAGTGAGTTTGG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTCCAGAAGCTACCAGTaGAATCCCGCCCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSRSYQ*NPAHFS
Trigger: TGAGAAATGGGCGGGATTTCACTGGTAGCTTCTGGA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCTATCACATCAGCTCTaGAAACTCATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSLSHQL*KLIFSL
Trigger: CAGGGAAAAGATGAGTTTTCAGAGCTGATGTGATAG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGAGCAGGCAGCTGCTaGAAGCGTGTTTGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMRAGSC*KRVWSE
Trigger: TTCTGACCAAACACGCTTTCAGCAGCTGCCTGCTCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCTCAGACTACATTCCTaGTACAGACAGAAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTLRLHS*YRQKAL
Trigger: CAAAGCCTTCTGTCTGTATCAGGAATGTAGTCTGAG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGACACAGTGTCTTATTaGAACAGACTGCCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLDTVSY*NRLPSS
Trigger: AGAGGATGGCAGTCTGTTTCAATAAGACACTGTGTC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTACTCATTCTCCATGTaGTTAATGAAGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSYSFSM*LMKDSV
Trigger: CACCGAGTCCTTCATTAAGCACATGGAGAATGAGTA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGCTAGGGAGGCAAACTaGTGCAGCTGCAGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKAREAN*CSCRGV
Trigger: AACGCCTCTGCAGCTGCAGCAGTTTGCCTCCCTAGC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCGATGGTGGGGTTCTTaGCCCATTTCCATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSRWWGS*PISIPR
Trigger: ACGAGGAATGGAAATGGGGCAAGAACCCCACCATCG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCTTCTCCATCTCGAGTaGGGTAGGAAACGATGGCCA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMLLHLE*GRKRWP
Trigger: TGGCCATCGTTTCCTACCGCACTCGAGATGGAGAAG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACAGGTGGAAGCTGGGTaGTCCTCTCACGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKQVEAG*SSHETG
Trigger: CCCTGTTTCGTGAGAGGAGCACCCAGCTTCCACCTG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTTTTGTAAGAGCCACTaGAGATTAGAAAAGCATTGC +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIFCKSH*RLEKHC
Trigger: GCAATGCTTTTCTAATCTGCAGTGGCTCTTACAAAA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGGCTCAGAGAGCTTGTaGCTAGTTCCTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSGSESL*LVPAAF
Trigger: AAAGGCTGCAGGAACTAGGCACAAGCTCTCTGAGCC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGGCTCAGAGAGCTTGTaGCTAGTTCCTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLGSESL*LVPAAF
Trigger: AAAGGCTGCAGGAACTAGGCACAAGCTCTCTGAGCC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGTATCAAAATCTAAATaGAGCAAATTCTGGGAATGC +
Preference number: 4 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQVSKSK*SKFWEC
Trigger: GCATTCCCAGAATTTGCTGCATTTAGATTTTGATAC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTCAATTTATCTTACATaGTCCCTGTCCGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCSIYLT*SLSVPF
Trigger: GAAAGGCACGGACAGGGAGCATGTAAGATAAATTGA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGGCTGCCATTCTTTGTaGGGGACTGTTTTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSGCHSL*GTVFLR
Trigger: CCTCAGGAAAACAGTCCCCCACAAAGAATGGCAGCC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTAAGTTCATCTTCTTaGCCACTTCCTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLSSSS*PLPPGY
Trigger: ATATCCTGGAGGAAGTGGCCAAGAAGATGAACTTAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCTCACACAAGGTCTTaGCATAAGCTTGCGATTTGC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSHTRS*HKLAIC
Trigger: GCAAATCGCAAGCTTATGCCAAGACCTTGTGTGAGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATCCACTTTCACCATCTaGTTGACAGGCGGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSTFTI*LTGGAS
Trigger: GGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCAGCACCTCCACGATaGTGGGGTTCTTGCCCCATT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPAPPR*WGSCPI
Trigger: AATGGGGCAAGAACCCCACCATCGTGGAGGTGCTGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAAGATATGATCTATCTTaGATTGCCGGCACCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGRYDLS*IAGTRR
Trigger: TCTTCGGGTGCCGGCAATCCAAGATAGATCATATCT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCTGCACGTACTTCTTTaGTTTGTCTGGCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSLHVLL*FVWLPG
Trigger: TCCCGGGAGCCAGACAAACCAAAGAAGTACGTGCAG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCAATGTTTCAGGTACATaGGCGTGGACCCTAATTATG +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCNVSGT*AWTLIM
Trigger: CATAATTAGGGTCCACGCCCATGTACCTGAAACATT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGAATGCCTCTTTCATTaGGAGACAGCCCCTTTAATC +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGECLFH*ETAPLI
Trigger: GATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATCCAAAGTCATCCAGTaGCAAAGTGGGAAGATCCTT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGSKVIQ*QSGKIL
Trigger: AAGGATCTTCCCACTTTGCCACTGGATGACTTTGGA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCACAGGTTTAAAACTTTaGAGATCAACTGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCTGLKL*RSTAEG
Trigger: GCCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTTCCTACCGAAGACTTaGCTGCCCATTTTTGATCTG +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLFLPKT*LPIFDL
Trigger: CAGATCAAAAATGGGCAGCCAAGTCTTCGGTAGGAA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATTCCTACCGAAGACTTaGCTGCCCATTTTTGATCTG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGFLPKT*LPIFDL
Trigger: CAGATCAAAAATGGGCAGCCAAGTCTTCGGTAGGAA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTCCTGCCTTCTAGCCTaGAGTTGTGAAGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSCLLA*SCEAAC
Trigger: ACAAGCTGCTTCACAACTCCAGGCTAGAAGGCAGGA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTTTTGTGAAATGGGGCTaGAGCTGCTACTGGTCAATT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTFVKWG*SCYWSI
Trigger: AATTGACCAGTAGCAGCTCCAGCCCCATTTCACAAA...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGTGCCTTCCACACACTaGAGAAGCAAGACATGTTAT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLVPSTH*RSKTCY
Trigger: ATAACATGTCTTGCTTCTCCAGTGTGTGGAAGGCAC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGGGGCTCAGGCATCTaGATTGCCCATCCTATTAGG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMRGSGI*IAHPIR
Trigger: CCTAATAGGATGGGCAATCCAGATGCCTGAGCCCCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGCCAAAGAGGACATTTaGATGCAGGAGACTATGAAG +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVAKEDI*MQETMK
Trigger: CTTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGCTACAGGTATCTTGTaGATGGAGGCCAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGATGIL*MEARNA
Trigger: AGCATTCCTGGCCTCCATCCACAAGATACCTGTAGC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCCTCAAATCCCACTTTaGCAGCAGATAATGGAAACA +
Preference number: 4 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCPQIPL*QQIMET
Trigger: TGTTTCCATTATCTGCTGCCAAAGTGGGATTTGAGG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACCAGCTCAAGAGCACTaGATCTCAGTGAGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGPAQEH*ISVSLN
Trigger: ATTAAGACTCACTGAGATCCAGTGCTCTTGAGCTGG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTTAAAAGAGCCGCTCTaGGCTCCAAAGCATACATCT +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGLKEPL*APKHTS
Trigger: AGATGTATGCTTTGGAGCCCAGAGCGGCTCTTTTAA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACTCTGCCTTGGAGGCTaGCTCTGGTTGCTTTCTTCG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKLCLGG*LWLLSS
Trigger: CGAAGAAAGCAACCAGAGTCAGCCTCCAAGGCAGAG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGTATGCATATCTCTGTaGACTGCACATTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGVCISL*TAHWLG
Trigger: ACCCAGCCAATGTGCAGTTCACAGAGATATGCATAC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATCAGCCCCAGGTCCTTaGACCACTCAAACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSAPGP*TTQTWG
Trigger: ACCCCAAGTTTGAGTGGTTCAAGGACCTGGGGCTGA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAATTGAGGGTCTTCAATaGAAGCAGTGGCAATCTAAG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGIEGLQ*KQWQSK
Trigger: CTTAGATTGCCACTGCTTTCATTGAAGACCCTCAAT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCGACTCCTTGACAAAATaGGACAATGTTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: VVAPIEEATWDLIMATLSDSLTK*DNVSIC
Trigger: ACAGATGGAAACATTGTCTCATTTTGTCAAGGAGTC...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGTATTTCCCCACCCTTaGTCTGAGCCTAACAATCTG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGVFPHP*SEPNNL
Trigger: CAGATTGTTAGGCTCAGATCAAGGGTGGGGAAATAC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCATACTAAGGCATATTaGCAGCTGACCACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMHTKAY*QLTTSL
Trigger: GAGGGAGGTGGTCAGCTGTCAATATGCCTTAGTATG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTACGAGAACACAACAATaGAAACAGTGGCGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSTRTQQ*KQWRQS
Trigger: GCTCTGCCGCCACTGTTTTCATTGTTGTGTTCTCGT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGGTGGCATGATTTCCTaGATCCGCCTCTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLGGMIS*IRLSPY
Trigger: ATAAGGAGAGAGGCGGATGCAGGAAATCATGCCACC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTGCAGATGTACTCAGTaGATCCCGTTTCCAATGTGC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGCRCTQ*IPFPMC
Trigger: GCACATTGGAAACGGGATGCACTGAGTACATCTGCA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCACTCAAACTTGGGGTaGCTGATGGGAACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSHSNLG*LMGTSN
Trigger: GTTGGAAGTTCCCATCAGGCACCCCAAGTTTGAGTG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGTGCCTTTCCAGACATaGGTGTTCCAGGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKVPFQT*VFQGSG
Trigger: GCCTGATCCCTGGAACACGCATGTCTGGAAAGGCAC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTTTGGGGAGGGGATTTaGACAATCCATTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGFGEGI*TIHWMG
Trigger: ACCCATCCAATGGATTGTGCAAATCCCCTCCCCAAA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAGAGGAACTGTGTTTTaGTTATCTCTGCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRRGTVF*LSLQTA
Trigger: GGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAAAGTTTCTGCTGCGTaGTCCAGGAAATCTATAATG +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKKVSAA*SRKSIM
Trigger: CATTATAGATTTCCTGGAGCACGCAGCAGAAACTTT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGCTCTGGAGGAATCTaGAAGAGCTCAGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSSGGI*KSSGSL
Trigger: CAATGACCCTGAGCTCTTCCAGATTCCTCCAGAGCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCTAAGTTCATCTTCTTaGCCACTTCCTCCAGGATAT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVLSSSS*PLPPGY
Trigger: ATATCCTGGAGGAAGTGGCCAAGAAGATGAACTTAG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCTTCCTGCACAGAGTTaGGGTGCCTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLLPAQS*GASFPS
Trigger: TGATGGAAATGAGGCACCCCAACTCTGTGCAGGAAG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGACCTTGTGTGAGTTCTaGAGCTTCGGCCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMTLCEF*SFGHKG
Trigger: ACCTTTGTGGCCGAAGCTCCAGAACTCACACAAGGT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGAGACTCGCTTTTTGTaGACATTGGATAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVETRFL*TLDRPC
Trigger: ACAAGGTCTATCCAATGTCCACAAAAAGCGAGTCTC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTACGCCGTGGTGAATTaGTCCTTCTCCATCTCGAGT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMYAVVN*SFSISS
Trigger: ACTCGAGATGGAGAAGGACCAATTCACCACGGCGTA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTGGTATGGGTGGGTTTaGGGAGGGGATTTGCACAAT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMWYGWV*GGDLHN
Trigger: ATTGTGCAAATCCCCTCCCCAAACCCACCCATACCA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCAAAGCTACTAGGAGCTaGAAATGGGTTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLKATRS*KWVCRK
Trigger: TTTCCTGCAAACCCATTTCCAGCTCCTAGTAGCTTT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAAAGCTACTAGGAGCTaGAAATGGGTTTGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRKATRS*KWVCRK
Trigger: TTTCCTGCAAACCCATTTCCAGCTCCTAGTAGCTTT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTAAGCTTGACTTGGAGTaGGAAGCACTGATCAATTTG +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTKLDLE*EALINL
Trigger: CAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTGGTATCAGGAATTCTaGCAAATGAAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIWYQEF*QMKETH
Trigger: ATGTGTTTCTTTCATTTGCCAGAATTCCTGATACCA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCTCACTTTTGTGAAATaGGGCTGGAGCTGCTACTGG +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSLTFVK*GWSCYW
Trigger: CCAGTAGCAGCTCCAGCCCCATTTCACAAAAGTGAG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCTCCTTGTTGCTTCCTaGCAGTCTCAGACTACATTC +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGLLVAS*QSQTTF
Trigger: GAATGTAGTCTGAGACTGCCAGGAAGCAACAAGGAG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGGAGACTATGAAGGTTaGGGACAGCCAGAGAGTATG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMGDYEG*GQPESM
Trigger: CATACTCTCTGGCTGTCCCCAACCTTCATAGTCTCC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCCTCAAATCCCACTTTaGCAGCAGATAATGGAAACA +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTPQIPL*QQIMET
Trigger: TGTTTCCATTATCTGCTGCCAAAGTGGGATTTGAGG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp GCAAAGTGGGAAGATCCTTATTGCCACCAGGCTTCTTaGAACAACATAACTTCCAGGCCCCTTGGATGCTAT +
Preference number: 4 (lower is better)
Translates to: AKWEDPYCHQAS*NNITSRPLGCY
Trigger: ATAGCATCCAAGGGGCCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCACTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp ATAGATTCTAACCTTCTGCACGAGAGGAACTGTGTTTaGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: IDSNLLHERNCV*LISANCPVPST
Trigger: TGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGTTAGAATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAAACGATGGCCACAGTaGGGTGCACTTCATCAGGGT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKKRWPQ*GALHQG
Trigger: ACCCTGATGAAGTGCACCTCACTGTGGCCATCGTTT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGTTCGTATGACATTATaGCTAGGAAAAACTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGVRMTL*LGKTED
Trigger: GTCCTCAGTTTTTCCTAGTCATAATGTCATACGAAC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTGCCCATTTTTGATCTaGGTTGAGGGTAACTTATTT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKCPFLI*VEGNLF
Trigger: AAATAAGTTACCCTCAACTCAGATCAAAAATGGGCA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTTATCCTATCATCACTaGAACGAATTAGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRLSYHH*NELAVT
Trigger: CGTCACTGCTAATTCGTTTCAGTGATGATAGGATAA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTCTCTTTCTGGGAACTaGCTGACACTAATTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVSLSGN*LTLICS
Trigger: ACTACAAATTAGTGTCAGGCAGTTCCCAGAAAGAGA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAATGGAAAAGCATTCCTaGATAAAGCTTGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGMEKHS*IKLDLE
Trigger: CTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCAT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGCCCAGCCTGCAAGATaGTTTAATTTCTCCTTTATT +
Preference number: 4 (lower is better)
Translates to: NRLPLREELHRLQFLPKTAQPAR*FNFSFI
Trigger: AATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGAAAGTTTCTGCTGCGTaGTCCAGGAAATCTATAATG +
Preference number: 4 (lower is better)
Translates to: LAADNGNNHWARQSFCCVKVSAA*SRKSIM
Trigger: CATTATAGATTTCCTGGAGCACGCAGCAGAAACTTT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGAATGAGGACCACGTaGGTCTCAGAGGCAATGCCT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKRMRTT*VSEAMP
Trigger: AGGCATTGCCTCTGAGACCCACGTGGTCCTCATTCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTCGGCAAGAGAGGGAGTaGGAACAGAGTTTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSRQERE*EQSFVR
Trigger: TCTTACAAAACTCTGTTCCCACTCCCTCTCTTGCCG...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAACGGCCATGTTCCAGTaGTTTCATGCACCCGTGAGT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKTAMFQ*FHAPVS
Trigger: ACTCACGGGTGCATGAAACCACTGGAACATGGCCGT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTTTCTTGTCTCTTTCTaGGAACTGCCTGACACTAAT +
Preference number: 4 (lower is better)
Translates to: SYRAQPARCFNFSFILTLFLVSF*ELPDTN
Trigger: ATTAGTGTCAGGCAGTTCCCAGAAAGAGACAAGAAA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTGTTCTTTATATCTGTaGAAGAGTGAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGCSLYL*KSEQGK
Trigger: TTTCCCCTGCTCACTCTTCCACAGATATAAAGAACA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGATCTGGACTCCACTCTaGTCCTTGAGAGGTTACTCA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLIWTPL*SLRGYS
Trigger: TGAGTAACCTCTCAAGGACCAGAGTGGAGTCCAGAT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCCATGCTCTGTACTGTaGCCAGAACTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGPCSVL*PELSFP
Trigger: TGGAAAAGAAAGTTCTGGCCACAGTACAGAGCATGG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACAGGTATCTTGTGGATaGAGGCCAGGAATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKQVSCG*RPGMLL
Trigger: GAGCAGCATTCCTGGCCTCCATCCACAAGATACCTG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp CCAAAGTCATCCAGTGGCAAAGTGGGAAGATCCTTATaGCCACCAGGCTTCTTTGAACAACATAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: PKSSSGKVGRSL*PPGFFEQHNFQ
Trigger: CTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCACTTTGCCACTGGATGACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTGGGAAGATCCTTATTaGCACCAGGCTTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSWEDPY*HQASLN
Trigger: GTTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTCTCACACAAGGTCTTaGCATAAGCTTGCGATTTGC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSHTRS*HKLAIC
Trigger: GCAAATCGCAAGCTTATGCCAAGACCTTGTGTGAGA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTGGTATCAGGAATTCTaGCAAATGAAAGAAACACAT +
Preference number: 4 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKWYQEF*QMKETH
Trigger: ATGTGTTTCTTTCATTTGCCAGAATTCCTGATACCA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTACTCTTCCCAATTCCTaGACAACTCTTACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSTLPNS*TTLTFQ
Trigger: CTGGAAGGTAAGAGTTGTCCAGGAATTGGGAAGAGT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGCCAAAGAGGACATTTaGATGCAGGAGACTATGAAG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMAKEDI*MQETMK
Trigger: CTTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTATAATGAGAAGTCCTaGGGTAGCCAGCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLYNEKS*GSQQRF
Trigger: GAATCTCTGCTGGCTACCCCAGGACTTCTCATTATA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp TGTTCTTTATATCTGTGGAAGAGTGAGCAGGGGAAATaGGGATTAAAGGAAGGCAGGGGAGATTATAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSLYLWKSEQGK*GLKEGRGDYSW
Trigger: CCAGCTATAATCTCCCCTGCCTTCCTTTAATCCCAATTTCCCCTGCTCACTCTTCCACAGATATAAAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGAAATGCAGTAAGTTTTaGACCAGGTACTGTAACTGG +
Preference number: 4 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGKCSKF*TRYCNW
Trigger: CCAGTTACAGTACCTGGTTCAAAACTTACTGCATTT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCTATCACATCAGCTCTaGAAACTCATCTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMLSHQL*KLIFSL
Trigger: CAGGGAAAAGATGAGTTTTCAGAGCTGATGTGATAG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTGTTGGATATCAAATTaGCGCTGTTGCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLCWISN*RCCQKL
Trigger: AAGCTTCTGGCAACAGCGGCAATTTGATATCCAACA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGTATCAAAATCTAAATaGAGCAAATTCTGGGAATGC +
Preference number: 4 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGVSKSK*SKFWEC
Trigger: GCATTCCCAGAATTTGCTGCATTTAGATTTTGATAC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCCAAAAATATCCTCATaGTATCGGTTGTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLPKISS*YRLSSL
Trigger: GAGGGATGACAACCGATACCATGAGGATATTTTTGG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCCAAAAATATCCTCATaGTATCGGTTGTCATCCCTC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMPKISS*YRLSSL
Trigger: GAGGGATGACAACCGATACCATGAGGATATTTTTGG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGAGGGCTCTGCTCACTaGTATCAAAATCTAAATGCA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLEGSAH*YQNLNA
Trigger: TGCATTTAGATTTTGATACCAGTGAGCAGAGCCCTC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGTCTTTAATGGGGATTaGACACAACAGTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLVFNGD*TQQFPS
Trigger: GGAAGGAAACTGTTGTGTCCAATCCCCATTAAAGAC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGCACTGGATCTCAGTaGGTCTTAATCAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSTGSQ*VLIRTN
Trigger: GTTGGTTCTGATTAAGACTCACTGAGATCCAGTGCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGAGATTAGAAAAGCATTaGATCGCAGCAGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLRLEKH*IAAGKL
Trigger: GAGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGTAAATTCAACAGGTTaGCTCTTAGGGAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSVNSTG*LLGRNY
Trigger: GTAATTCCTCCCTAAGAGGCAACCTGTTGAATTTAC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGGTAAATTCAACAGGTTaGCTCTTAGGGAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMVNSTG*LLGRNY
Trigger: GTAATTCCTCCCTAAGAGGCAACCTGTTGAATTTAC...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTCTCTTTCTGGGAACTaGCTGACACTAATTTGTAGT +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSLSGN*LTLICS
Trigger: ACTACAAATTAGTGTCAGGCAGTTCCCAGAAAGAGA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTGTCATATTCTTCCATaGACATCACCTTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLCHILP*TSPWHQ
Trigger: TTGATGCCAAGGTGATGTCCATGGAAGAATATGACA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTTTCTTGTCTCTTTCTaGGAACTGCCTGACACTAAT +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLFLVSF*ELPDTN
Trigger: ATTAGTGTCAGGCAGTTCCCAGAAAGAGACAAGAAA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTGTTCTTTATATCTGTaGAAGAGTGAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMCSLYL*KSEQGK
Trigger: TTTCCCCTGCTCACTCTTCCACAGATATAAAGAACA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGTGCCTTCCACACACTaGAGAAGCAAGACATGTTAT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKVPSTH*RSKTCY
Trigger: ATAACATGTCTTGCTTCTCCAGTGTGTGGAAGGCAC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCATGCTCTGTACTGTaGCCAGAACTTTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPCSVL*PELSFP
Trigger: TGGAAAAGAAAGTTCTGGCCACAGTACAGAGCATGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTCAAATCCCTGTTCATaGGGAACATCTATGTTGACT +
Preference number: 4 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSSNPCS*GTSMLT
Trigger: AGTCAACATAGATGTTCCCCATGAACAGGGATTTGA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
3UTR CAA 72 bp TCCCTGATGGAAAAGCATTCCTGCATAAAGCTTGACTaGGAGTGGGAAGCACTGATCAATTTGTCTTTAATG +
Preference number: 4 (lower is better)
Translates to: SLMEKHSCIKLD*EWEALINLSLM
Trigger: CATTAAAGACAAATTGATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCAGGAATGCTTTTCCATCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATGTTGGATATCAAATTaGCGCTGTTGCCAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKCWISN*RCCQKL
Trigger: AAGCTTCTGGCAACAGCGGCAATTTGATATCCAACA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR GCA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTTTTGTAAGAGCCACTaGAGATTAGAAAAGCATTGC +
Preference number: 4 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLFCKSH*RLEKHC
Trigger: GCAATGCTTTTCTAATCTGCAGTGGCTCTTACAAAA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGAGAGAGAGGCTTTTaGTATCAGGAATTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKRERGF*YQEFWQ
Trigger: TTGCCAGAATTCCTGATACCAAAAGCCTCTCTCTCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR TCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGACTCCTTGACAAAATaGGACAATGTTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKDSLTK*DNVSIC
Trigger: ACAGATGGAAACATTGTCTCATTTTGTCAAGGAGTC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAAATGCAGCAAATTCTaGGAATGCCTCTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKKCSKF*ECLFHW
Trigger: CCAATGAAAGAGGCATTCCCAGAATTTGCTGCATTT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CCA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATTCATTCCTTTGTGTTaGATATCAAATTGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKFIPLC*ISNCRC
Trigger: ACAGCGGCAATTTGATATCCAACACAAAGGAATGAA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp CATTCCCGGGACCCGAGGCCCCATCCACTGCCAGGGGCTGTTCTTTaGCGGCCGGTGGCTGGTGGGACAGATCCACGGCTTTGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: HSRDPRPHPLPGAVL*RPVAGGTDPRLWWG
Trigger: CCCCCACCAAAGCCGTGGATCTGTCCCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGGCAGTGGATGGGGCCTCGGGTCCCGGGAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp GTAGGCATGCTGAGGCCCATTCCCGGGACCCGAGGCCCCATCCACTaGCAGGGGCTGTTCTTTGCCGGCCGGTGGCTGGTGGGACAGATC +
Preference number: 5 (lower is better)
Translates to: VGMLRPIPGTRGPIH*QGLFFAGRWLVGQI
Trigger: GATCTGTCCCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGGCAGTGGATGGGGCCTCGGGTCCCGGGAATGGGCCTCAGCATGCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp TCCACCAAGGGCCGGCCGTTGACCGCAAGAATGATGTCTCCGGCCTaGATGAGGCCACTCTGCTCTGCGGCGCCCCCACGAATCAGGTCA +
Preference number: 5 (lower is better)
Translates to: STKGRPLTARMMSPA*MRPLCSAAPPRIRS
Trigger: TGACCTGATTCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCATTCTTGCGGTCAACGGCCGGCCCTTGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp AGGTCCTCGTGGTTGCCAGGGAAGACACCCAGGTGGTCCCCAGGCTaGTACTGCAGCTCCTGGCTCCCGTTGGTGTGGAGACGCACGAAG +
Preference number: 5 (lower is better)
Translates to: RSSWLPGKTPRWSPG*YCSSWLPLVWRRTK
Trigger: CTTCGTGCGTCTCCACACCAACGGGAGCCAGGAGCTGCAGTACCAGCCTGGGGACCACCTGGGTGTCTTCCCTGGCAACCACGAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACAATGGCTCGCCGCTTaGTGGGGGTCCCGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLQWLAA*WGSRWC
Trigger: GCACCAACGGGACCCCCACAAAGCGGCGAGCCATTG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 90 bp CCGGCGTCCTCTGCCGAGAGCTTCCCCTGCTGGGTCATGATGCGCTaGATGGCTTTGAGGACATCAGCAGCCATGGTGACGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: PASSAESFPCWVMMR*MALRTSAAMVTSPQ
Trigger: CTGTGGGGACGTCACCATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGCCAGGGGCTGTTCTTaGCCGGCCGGTGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQARGCS*PAGGWW
Trigger: CCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGGC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp GACCGCAAGAATGATGTCTCCGGCCTGGATGAGGCCACTCTGCTCTaGGGCGCCCCCACGAATCAGGTCAGAGATGATCACGGGCGGCTT +
Preference number: 5 (lower is better)
Translates to: DRKNDVSGLDEATLL*GAPTNQVRDDHGRL
Trigger: AAGCCGCCCGTGATCATCTCTGACCTGATTCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCATTCTTGCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp CCGTTGACCGCAAGAATGATGTCTCCGGCCTGGATGAGGCCACTCTaGTCTGCGGCGCCCCCACGAATCAGGTCAGAGATGATCACGGGC +
Preference number: 5 (lower is better)
Translates to: PLTARMMSPAWMRPL*SAAPPRIRSEMITG
Trigger: GCCCGTGATCATCTCTGACCTGATTCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCATTCTTGCGGTCAACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp TCAGCAGCCATGGTGACGTCCCCACAGACGTATATGTGGCCCCCTTaGTCCTTCAGGGCTCGGTACACAGACTCCGCCAGCTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SAAMVTSPQTYMWPP*SFRARYTDSASCSC
Trigger: GCAGGAGCAGCTGGCGGAGTCTGTGTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGGGGACGTCACCATGGCTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp GGCTGTCACGGGCTGCAGCCAGACCGTGGACTTCTGTGTCACCATTaGGGAGGGGAGGCCCTTTACGGGGAAAGAAACGCAAGGGTTCCG +
Preference number: 5 (lower is better)
Translates to: GCHGLQPDRGLLCHH*GGEALYGERNARVP
Trigger: CGGAACCCTTGCGTTTCTTTCCCCGTAAAGGGCCTCCCCTCCCCAATGGTGACACAGAAGTCCACGGTCTGGCTGCAGCCCGTGACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTCTGTGAACTGCACATaGGCTGGGTCCCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSVNCT*AGSPRV
Trigger: CACCCTGGGGGACCCAGCCAATGTGCAGTTCACAGA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGCCTGCCCCATCAGCTaGGCCGAGAACTTGACAGCT +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWACPIS*AENLTA
Trigger: AGCTGTCAAGTTCTCGGCCAAGCTGATGGGGCAGGC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp AAGCCGTGTTCCGCTCCTCCAGCAGTTCCACTTTCACCATCTGGTTaGCAGGCGGCGCGTCCTCCAGCCGCTCGATCAGGGCATTCACGA +
Preference number: 5 (lower is better)
Translates to: KPCSAPPAVPLSPSG*QAARPPAARSGHSR
Trigger: TCGTGAATGCCCTGATCGAGCGGCTGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGAACTGCTGGAGGAGCGGAACACGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp ATCCGGCTGATGAATACGCCGGCGTCCTCTGCCGAGAGCTTCCCCTaGTGGGTCATGATGCGCTGGATGGCTTTGAGGACATCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: IRLMNTPASSAESFP*WVMMRWMALRTSAA
Trigger: GGCTGCTGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTATTCATCAGCCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp GCCCTCTCTGTCTTTGACGTCAGCTCAGCGTCACCCACTCATGGCTaGTGGCCCGTCGGTGGCATGATTTCCTGCATCCGCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: ALSVFDVSSASPTHG*WPVGGMISCIRLSP
Trigger: AGGAGAGAGGCGGATGCAGGAAATCATGCCACCGACGGGCCACCAGCCATGAGTGGGTGACGCTGAGCTGACGTCAAAGACAGAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 90 bp CCTAAAGCCGTGTTCCGCTCCTCCAGCAGTTCCACTTTCACCATCTaGTTGACAGGCGGCGCGTCCTCCAGCCGCTCGATCAGGGCATTC +
Preference number: 5 (lower is better)
Translates to: PKAVFRSSSSSTFTI*LTGGASSSRSIRAF
Trigger: GAATGCCCTGATCGAGCGGCTGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGAACTGCTGGAGGAGCGGAACACGGCTTTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp CGGCTGATGAATACGCCGGCGTCCTCTGCCGAGAGCTTCCCCTGCTaGGTCATGATGCGCTGGATGGCTTTGAGGACATCAGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: RLMNTPASSAESFPC*VMMRWMALRTSAAM
Trigger: CATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTATTCATCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCAGGTGCCCCTCCCTaGACCCCTCTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEAGAPP*TPLLPL
Trigger: CAGTGGGAGCAGAGGGGTCAAGGGAGGGGCACCTGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGCTTCTGCTAGCTTCTaGAAGCCAATGGCTCGCCGC +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWASASF*KPMARR
Trigger: GCGGCGAGCCATTGGCTTCAAGAAGCTAGCAGAAGC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCCAGCACTCTCAAAGTaGTCTCTGAGGTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWPALSK*SLRSGP
Trigger: TGGGCCCGACCTCAGAGACAACTTTGAGAGTGCTGG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGCCTTGAAGACCTTCTaGGCCCAGGTCCTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWALKTF*AQVLKA
Trigger: GGCTTTCAGGACCTGGGCCAAGAAGGTCTTCAAGGC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGCCCGGCACCGCTCTTaGGGCCTTCTGGAAAACCAC +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVARHRS*GLLENH
Trigger: GTGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGGC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp CAGGAGGATCCAGGCTTCAGGCTACACGGAGAGCAGGAGCCGGGGTaGCAGGTGCTGACAAGGCTTCAGCCCTCTCTGTCTTTGACGTCA +
Preference number: 5 (lower is better)
Translates to: QEDPGFRLHGEQEPG*QVLTRLQPSLSLTS
Trigger: TGACGTCAAAGACAGAGAGGGCTGAAGCCTTGTCAGCACCTGTCACCCCGGCTCCTGCTCTCCGTGTAGCCTGAAGCCTGGATCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp CGGATGGTCTTGGGGGTCCCATCACCTGTAAAGGTGGTCTCCAGGTaGGTGGTGAAACCTTCAGGGCCCCTCAGAATGAGGACCACGTGG +
Preference number: 5 (lower is better)
Translates to: RMVLGVPSPVKVVSR*VVKPSGPLRMRTTW
Trigger: CCACGTGGTCCTCATTCTGAGGGGCCCTGAAGGTTTCACCACGCACCTGGAGACCACCTTTACAGGTGATGGGACCCCCAAGACCATCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp CCTTGCTCCTTCAGGGCTCGGTACACAGACTCCGCCAGCTGCTCCTaGAGGATGTCCTGCACGTACTTCTTTGGTTTGTCTGGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: PCSFRARYTDSASCS*RMSCTYFFGLSGSR
Trigger: CCGGGAGCCAGACAAACCAAAGAAGTACGTGCAGGACATCCTGCAGGAGCAGCTGGCGGAGTCTGTGTACCGAGCCCTGAAGGAGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp TCGGTTGTCATCCCTCATCCGGCTGATGAATACGCCGGCGTCCTCTaGCGAGAGCTTCCCCTGCTGGGTCATGATGCGCTGGATGGCTTT +
Preference number: 5 (lower is better)
Translates to: SVVIPHPADEYAGVL*RELPLLGHDALDGF
Trigger: AAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTATTCATCAGCCGGATGAGGGATGACAACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp AGGTGCGTGGTGAAACCTTCAGGGCCCCTCAGAATGAGGACCACGTaGGTCTCAGAGGCAATGCCTCTGAGTACCTCCAGGGCGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RCVVKPSGPLRMRTT*VSEAMPLSTSRALS
Trigger: TGACAGCGCCCTGGAGGTACTCAGAGGCATTGCCTCTGAGACCCACGTGGTCCTCATTCTGAGGGGCCCTGAAGGTTTCACCACGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp TTGAGGACATCAGCAGCCATGGTGACGTCCCCACAGACGTATATGTaGCCCCCTTGCTCCTTCAGGGCTCGGTACACAGACTCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: LRTSAAMVTSPQTYM*PPCSFRARYTDSAS
Trigger: GCTGGCGGAGTCTGTGTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGGGGACGTCACCATGGCTGCTGATGTCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGTCACCCGGATGGTCTaGGGGGTCCCATCACCTGTA +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHVTRMV*GVPSPV
Trigger: TACAGGTGATGGGACCCCCAAGACCATCCGGGTGAC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGTCGCTTTCACCCTCTaGGCCATAGCCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHVAFTL*AIACPI
Trigger: GATGGGGCAGGCTATGGCCAAGAGGGTGAAAGCGAC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGACCCGTGAGTTGCCCTaGTCGGCAAGAGAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVTRELP*SAREGV
Trigger: CACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAGGCAGAAGAATCACTaGAACTGGGGGAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWRQKNH*NWGRQR
Trigger: CCTCTGCCTCCCCCAGTTCAAGTGATTCTTCTGCCT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATGCATGGAGGCAGATTaGTTCCCGCCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQCMEAD*FPPARA
Trigger: GGCCCTGGCAGGCGGGAACAAATCTGCCTCCATGCA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACAGCCCTCTCTGTCTTaGACGTCAGCTCAGCGTCAC +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGQPSLS*TSAQRH
Trigger: GTGACGCTGAGCTGACGTCAAAGACAGAGAGGGCTG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCCCAGGCCCCCAACTTaGCGCTTGAAGAGACGAACA +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVPRPPT*RLKRRT
Trigger: TGTTCGTCTCTTCAAGCGCAAAGTTGGGGGCCTGGG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAACCAAGGGCCGGCCGTaGACCGCAAGAATGATGTCT +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGTKGRP*TARMMS
Trigger: AGACATCATTCTTGCGGTCAACGGCCGGCCCTTGGT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGCCAGGGGCTGTTCTTaGCCGGCCGGTGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLARGCS*PAGGWW
Trigger: CCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGGC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTCTTTCATCTCTGCCTaGGCAGGTGCCCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHSFISA*AGAPPL
Trigger: CAAGGGAGGGGCACCTGCCAAGGCAGAGATGAAAGA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACCGAGGGGCAGAGGTTaGTGTGACTTGCCGTCCAAA +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGPRGRG*CDLPSK
Trigger: TTTGGACGGCAAGTCACACAAACCTCTGCCCCTCGG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGGAAGAGCTGTCCTTTaGTGCGGACGTCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGGRAVL*CGRLQA
Trigger: GGCCTGAAGACGTCCGCACAAAAGGACAGCTCTTCC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTCAGGGGGATCTCCATaGCCAAAGGTGCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVSGGSP*PKVLVT
Trigger: GGTCACCAGCACCTTTGGCAATGGAGATCCCCCTGA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGAAGGTGAGGCGGAACTaGTTTCTCTTCCAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWKVRRN*FLFQLR
Trigger: TCGCAGCTGGAAGAGAAACAAGTTCCGCCTCACCTT...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCAGGGCTCTGGAGGTTTaGACGGCTAAGGAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIRALEV*TAKEPG
Trigger: GCCCGGCTCCTTAGCCGTCAAAACCTCCAGAGCCCT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTCAGCCTGTATCCGGTaGAGCCAGGAGGAGCATACG +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHSACIR*SQEEHT
Trigger: CGTATGCTCCTCCTGGCTCAACCGGATACAGGCTGA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGTATATGTGGCCCCCTaGCTCCTTCAGGGCTCGGTA +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHVYVAP*LLQGSV
Trigger: TACCGAGCCCTGAAGGAGCAAGGGGGCCACATATAC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGATCATGCACCCGTGAGTaGCCCTTGTCGGCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGSCTRE*PLSARE
Trigger: CTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGA...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACTAAGATCGACACACTaGTGCAGGGAAGAGGACGGA +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLLRSTH*CREEDG
Trigger: TCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAG...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATCTTCCCACCCCAAGTaGTGGCTCCTATCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLSSHPK*WLLSKK
Trigger: CTTCTTCGATAGGAGCCACAACTTGGGGTGGGAAGA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTGGGGAACATCTATGTaGACTCCCTGGGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVWGTSM*TPWEAG
Trigger: GCCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGCCTGGGAGGGGTTTTaGAAAGCATACTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGAWEGF*KAYCPP
Trigger: GGGAGGGCAGTATGCTTTCAAAAACCCCTCCCAGGC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCCCGGCACCGCTCTTaGGGCCTTCTGGAAAACCAC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEARHRS*GLLENH
Trigger: GTGGTTTTCCAGAAGGCCCAAAGAGCGGTGCCGGGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp GCCGTCCAAATCTCTGTCCACCTGGATTCCCATATCTTTCATCTCTaGCTTGGCAGGTGCCCCTCCCTTGACCCCTCTGCTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: AVQISVHLDSHIFHL*LGRCPSLDPSAPTG
Trigger: ACCAGTGGGAGCAGAGGGGTCAAGGGAGGGGCACCTGCCAAGGCAGAGATGAAAGATATGGGAATCCAGGTGGACAGAGATTTGGACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 90 bp CTCTCTGTCTTTGACGTCAGCTCAGCGTCACCCACTCATGGCTGGTaGCCCGTCGGTGGCATGATTTCCTGCATCCGCCTCTCTCCTTAT +
Preference number: 5 (lower is better)
Translates to: LSVFDVSSASPTHGW*PVGGMISCIRLSPY
Trigger: ATAAGGAGAGAGGCGGATGCAGGAAATCATGCCACCGACGGGCCACCAGCCATGAGTGGGTGACGCTGAGCTGACGTCAAAGACAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGACATTGGGCTGGATTaGCTGAACACCGAACATGTG +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLDIGLD*LNTEHV
Trigger: CACATGTTCGGTGTTCAGCAAATCCAGCCCAATGTC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGCAGGTGCCCCTCCCTaGACCCCTCTGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRAGAPP*TPLLPL
Trigger: CAGTGGGAGCAGAGGGGTCAAGGGAGGGGCACCTGC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAAGAGGTTTGTGTGACTaGCCGTCCAAATCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLRGLCD*PSKSLS
Trigger: GGACAGAGATTTGGACGGCAAGTCACACAAACCTCT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCGTCTTCAGGCCTCCTaGCATGCTGAGAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVRLQAS*HAEKDA
Trigger: TGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGCCTGCCCCATCAGCTaGGCCGAGAACTTGACAGCT +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIACPIS*AENLTA
Trigger: AGCTGTCAAGTTCTCGGCCAAGCTGATGGGGCAGGC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAACATCACAGGCTGCCTaGAAGACCTTCTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGTSQAA*KTFLAQ
Trigger: CTGGGCCAAGAAGGTCTTCAAGGCAGCCTGTGATGT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGACTTTCACCATCTGGTaGACAGGCGGCGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWETFTIW*TGGASS
Trigger: GGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAATCAAATTGCCGCTGTaGCCAGAAGCTTCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLIKLPL*PEASER
Trigger: CCTTTCCGAAGCTTCTGGCAACAGCGGCAATTTGAT...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAAAGACCCCCTTGTTCTaGGCCTGCAGGGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQKTPLF*ACRVSS
Trigger: GGAAGAGACCCTGCAGGCCAAGAACAAGGGGGTCTT...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp CTCCTCTCACGAAACAGGGGACCAGTTCGTCAGCCTGTATCCGGTTaGGCCAGGAGGAGCATACGCCGTGGTGAATTGGTCCTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: LLSRNRGPVRQPVSG*ARRSIRRGELVLLH
Trigger: ATGGAGAAGGACCAATTCACCACGGCGTATGCTCCTCCTGGCTCAACCGGATACAGGCTGACGAACTGGTCCCCTGTTTCGTGAGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCAGCCCTCTCTGTCTTaGACGTCAGCTCAGCGTCAC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEQPSLS*TSAQRH
Trigger: GTGACGCTGAGCTGACGTCAAAGACAGAGAGGGCTG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCCGAGGGGCAGAGGTTaGTGTGACTTGCCGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIPRGRG*CDLPSK
Trigger: TTTGGACGGCAAGTCACACAAACCTCTGCCCCTCGG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTTCCCCCATAGGTCATaGAAGACTCGGTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVFPHRS*KTRSFS
Trigger: GGAGAACGACCGAGTCTTCAATGACCTATGGGGGAA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCAGGACGACAGGCACATaGCCCTTCCCCCATAGGTCA +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSRTTGT*PFPHRS
Trigger: TGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCCT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTCTGAATATGGGTTGTaGAGGACGACAGGCACATTG +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSEYGL*RTTGTL
Trigger: CAATGTGCCTGTCGTCCTCAACAACCCATATTCAGA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTCAGTCTCCCAGTTCTaGACCTTGAGGAAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVSVSQF*TLRKRG
Trigger: TCCACGCTTCCTCAAGGTCAAGAACTGGGAGACTGA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAACGTCTTCAGGCCTCCTaGCATGCTGAGAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQRLQAS*HAEKDA
Trigger: TGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACG...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGATCTCTAGGAGCATGTaGGACACGGCGGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKISRSM*DTAGRP
Trigger: CGGCCTCCCCGCCGTGTCCAACATGCTCCTAGAGAT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTTTGTGGGGGTCCCGTaGGTGCCTTTCCAGACATGC +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIFVGVP*VPFQTC
Trigger: GCATGTCTGGAAAGGCACCAACGGGACCCCCACAAA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCAATGGCTCGCCGCTTaGTGGGGGTCCCGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGQWLAA*WGSRWC
Trigger: GCACCAACGGGACCCCCACAAAGCGGCGAGCCATTG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGCATCAAAGGCGTGTTaGAAGATCTCACACAAGGTC +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWASKAC*KISHKV
Trigger: GACCTTGTGTGAGATCTTCAAACACGCCTTTGATGC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAGCTCCTGGCTCCCGTaGGTGTGGAGACGCACGAAG +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSSWLP*VWRRTK
Trigger: CTTCGTGCGTCTCCACACCAACGGGAGCCAGGAGCT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCACGAGGTCCTCGTGGTaGCCAGGGAAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCTRSSW*PGKTPR
Trigger: CCTGGGTGTCTTCCCTGGCAACCACGAGGACCTCGT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTCTCTGAAGACCCCCTaGTTCTTGGCCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPISLKTP*FLACRV
Trigger: GACCCTGCAGGCCAAGAACAAGGGGGTCTTCAGAGA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCCTGCACGTACTTCTTaGGTTTGTCTGGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSPARTS*VCLAPG
Trigger: CCCGGGAGCCAGACAAACCAAAGAAGTACGTGCAGG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGTATATGTGGCCCCCTaGCTCCTTCAGGGCTCGGTA +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSVYVAP*LLQGSV
Trigger: TACCGAGCCCTGAAGGAGCAAGGGGGCCACATATAC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGACTAAGATCGACACACTaGTGCAGGGAAGAGGACGGA +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGLRSTH*CREEDG
Trigger: TCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAG...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATGCCACCAGGCTTCTTaGAACAACATAACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLCHQAS*NNITSR
Trigger: CCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGTGGGAAGATCCTTATaGCCACCAGGCTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLVGRSL*PPGFFE
Trigger: TTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCAC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGATTCCCTTTCCATCCTaGGGGACCCTGCAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWIPFPS*GTLQSG
Trigger: CCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAAT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGATTCCCTTTCCATCCTaGGGGACCCTGCAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEIPFPS*GTLQSG
Trigger: CCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAAT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGTACAGACAGAAGGCTTaGAGGACATGGTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVYRQKA*RTWWPQ
Trigger: CTGTGGCCACCATGTCCTCAAAGCCTTCTGTCTGTA...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATGCCTGGCCTACTTTTaGAGCCAAAGAGGACATTTG +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLCLAYF*SQRGHL
Trigger: CAAATGTCCTCTTTGGCTCAAAAAGTAGGCCAGGCA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAGAGGCCAGGCCAGGTaGGCCTCCAAAGTCAAATCC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWERGQAR*ASKVKS
Trigger: GGATTTGACTTTGGAGGCCAACCTGGCCTGGCCTCT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCCCTCAAATCCCACTTaGGCAGCAGATAATGGAAAC +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWPSNPT*AADNGN
Trigger: GTTTCCATTATCTGCTGCCAAAGTGGGATTTGAGGG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp TCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTACAAAACTTaGAGCCGGCTGGGCAAGAGGGTCCAGTTAGGAGCTGAAAACCTC +
Preference number: 5 (lower is better)
Translates to: SQRKGSAVSVRAYKT*SRLGKRVQLGAENL
Trigger: GAGGTTTTCAGCTCCTAACTGGACCCTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGCTGAGGTTCCCTTTGTaGGTGGCATACTTGACATGG +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVLRFPL*VAYLTW
Trigger: CCATGTCAAGTATGCCACCAACAAAGGGAACCTCAG...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCCGCGCTTACAAAACTaGCAGCCGGCTGGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKPRLQN*QPAGQE
Trigger: CTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGTGAAGCAGCTTGTGTaGGGGATTGAAAGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLVKQLV*GIERCL
Trigger: TAAACACCTTTCAATCCCCAACACAAGCTGCTTCAC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGACTCCACTCTGGTCCTaGAGAGGTTACTCAACAGAG +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVTPLWS*RGYSTE
Trigger: CTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAGT...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTCCCAAAATTCCATATaGATGGGTCTGAAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWSQNSI*MGLKCP
Trigger: GGGACACTTCAGACCCATCAATATGGAATTTTGGGA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGGAGAGGAACTGTGTTTaGCTTATCTCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWERNCV*LISANC
Trigger: GCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTC...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAGAAGGATTCACCCTGTaGACTCCAGAGAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGEGFTL*TPEKLT
Trigger: AGTCAGCTTCTCTGGAGTCAACAGGGTGAATCCTTC...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGAAGGATTCACCCTGTaGACTCCAGAGAAGCTGACT +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVEGFTL*TPEKLT
Trigger: AGTCAGCTTCTCTGGAGTCAACAGGGTGAATCCTTC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACTTCTGTGTCACCATaGGGGAGGGGAGGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPITSVSP*GRGGPL
Trigger: TAAAGGGCCTCCCCTCCCCAATGGTGACACAGAAGT...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS TCA 90 bp AGAACCTCACATTGGCCAGGGGTCCAGCACTCTCAAAGTTGTCTCTaGGGTCGGGCCCATCGCCTGATGATTTTTGGGAGTCAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: RTSHWPGVQHSQSCL*GRAHRLMIFGSQSR
Trigger: CCTACTCTGACTCCCAAAAATCATCAGGCGATGGGCCCGACCTCAGAGACAACTTTGAGAGTGCTGGACCCCTGGCCAATGTGAGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 90 bp CGCACGAAGATAGTTGACCGACTGGATTTAGGGCTCTGGAGGTTTTaGCGGCTAAGGAGCCGGGCAGCTGAGACTCGCTTTTTGTGGACA +
Preference number: 5 (lower is better)
Translates to: RTKIVDRLDLGLWRF*RLRSRAAETRFLWT
Trigger: TGTCCACAAAAAGCGAGTCTCAGCTGCCCGGCTCCTTAGCCGTCAAAACCTCCAGAGCCCTAAATCCAGTCGGTCAACTATCTTCGTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGCCCAGGCCCCCAACTTaGCGCTTGAAGAGACGAACA +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKPRPPT*RLKRRT
Trigger: TGTTCGTCTCTTCAAGCGCAAAGTTGGGGGCCTGGG...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTGTCACCCGGATGGTCTaGGGGGTCCCATCACCTGTA +
Preference number: 5 (lower is better)
Translates to: NRLPLREELHRLQFLPKTVTRMV*GVPSPV
Trigger: TACAGGTGATGGGACCCCCAAGACCATCCGGGTGAC...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACACAGGCTCTATCTCCTaGAGCAGTTCATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHTGSIS*SSSLFS
Trigger: GGAGAACAATGAACTGCTCAAGGAGATAGAGCCTGT...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTTCCCCCATAGGTCATaGAAGACTCGGTCGTTCTCC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEFPHRS*KTRSFS
Trigger: GGAGAACGACCGAGTCTTCAATGACCTATGGGGGAA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGATTCTCTGAATATGGGTaGTTGAGGACGACAGGCACA +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGFSEYG*LRTTGT
Trigger: TGTGCCTGTCGTCCTCAACAACCCATATTCAGAGAA...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGTCGCTTTCACCCTCTaGGCCATAGCCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRVAFTL*AIACPI
Trigger: GATGGGGCAGGCTATGGCCAAGAGGGTGAAAGCGAC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTCAGGGGGATCTCCATaGCCAAAGGTGCTGGTGACC +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSGGSP*PKVLVT
Trigger: GGTCACCAGCACCTTTGGCAATGGAGATCCCCCTGA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTCTTCCTGCACAGAGTaGGGGTGCCTCATTTCCATC +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSSSCTE*GCLISI
Trigger: GATGGAAATGAGGCACCCCAACTCTGTGCAGGAAGA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCACTGAGAACCTCACATaGGCCAGGGGTCCAGCACTC +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSTENLT*ARGPAL
Trigger: GAGTGCTGGACCCCTGGCCAATGTGAGGTTCTCAGT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGATACGCCGTGGTGAATaGGTCCTTCTCCATCTCGAG +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEIRRGE*VLLHLE
Trigger: CTCGAGATGGAGAAGGACCAATTCACCACGGCGTAT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTCAGCCTGTATCCGGTaGAGCCAGGAGGAGCATACG +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSSACIR*SQEEHT
Trigger: CGTATGCTCCTCCTGGCTCAACCGGATACAGGCTGA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGATGATCTATCTTGGATaGCCGGCACCCGAAGACCAG +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEMIYLG*PAPEDQ
Trigger: CTGGTCTTCGGGTGCCGGCAATCCAAGATAGATCAT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTCAGATCTAAGGCGGTaGGTCACTTCGTACGTTCGC +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPISDLRR*VTSYVR
Trigger: GCGAACGTACGAAGTGACCAACCGCCTTAGATCTGA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTCAGATCTAAGGCGGTaGGTCACTTCGTACGTTCGC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESDLRR*VTSYVR
Trigger: GCGAACGTACGAAGTGACCAACCGCCTTAGATCTGA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTATCATCGGTGTCTTTTTaGCTCTCTTCAATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLSSVSF*LSSMKA
Trigger: TGCCTTCATTGAAGAGAGCAAAAAAGACACCGATGA...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCAGATTAGAAAAGCATaGCATCGCAGCAGGAAAACT +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWQIRKA*HRSRKT
Trigger: AGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCTG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGACCCGTGAGTTGCCCTaGTCGGCAAGAGAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRTRELP*SAREGV
Trigger: CACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGGAATGCCTCTTTCATaGGGAGACAGCCCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVGMPLS*GDSPFN
Trigger: ATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTCC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGAGGGCCACAGGGGGTCCCAGAGGAAAGGTTCAGCAGTGTCTGTCCGCGCTTAGATTTGCACAATCCATaGGATGGGTTCATGTCACAT +
Preference number: 5 (lower is better)
Translates to: RGPQGVPEERFSSVCPRLDLHNP*DGFMSH
Trigger: ATGTGACATGAACCCATCCAATGGATTGTGCAAATC...TAAGCGCGGACAGACACTGCTGAACCTTTCCTCTGGGACCCCCTGTGGCCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACTGCATAAAGCTTGACTaGGAGTGGGAAGCACTGATC +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHCIKLD*EWEALI
Trigger: GATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCA...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAGAGGCCAGGCCAGGTaGGCCTCCAAAGTCAAATCC +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKRGQAR*ASKVKS
Trigger: GGATTTGACTTTGGAGGCCAACCTGGCCTGGCCTCT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCCTGGGTCCTTACATTaGGGGAAGGGCAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWPGSLH*GKGSFS
Trigger: AGAAAAGCTGCCCTTCCCCAAATGTAAGGACCCAGG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCCAATAGTGCTAAGGTaGACAGACCCTGCGCTACAG +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIPIVLR*TDPALQ
Trigger: CTGTAGCGCAGGGTCTGTCAACCTTAGCACTATTGG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCACACACACGGACACAGTGTCTTATaGAAACAGACTGCCATCCTC +
Preference number: 5 (lower is better)
Translates to: RHTCAGKRTDRDLAHHTHGHSVL*KQTAIL
Trigger: GAGGATGGCAGTCTGTTTCAATAAGACACTGTGTCC...GTGTGTGTGATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp TTGTGCGGACGTCTTCAGGCCTCCTTGCATGCTGAGAAGGATGCATaGTGGAGCCCATGCAGATGTACTCAGTGCATCCCGTTTCCAATG +
Preference number: 5 (lower is better)
Translates to: LCGRLQASLHAEKDA*WSPCRCTQCIPFPM
Trigger: CATTGGAAACGGGATGCACTGAGTACATCTGCATGGGCTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACGTCCGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp AGATGTGAACTATTCTCTGGGTATCTTCATTGCCAGCCTGTTAGATaGGGATCAGATCTGAGGCATCATGAGCCCGTCCGCTCGGCCGCT +
Preference number: 5 (lower is better)
Translates to: RCELFSGYLHCQPVR*GSDLRHHEPVRSAA
Trigger: AGCGGCCGAGCGGACGGGCTCATGATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCAATGAAGATACCCAGAGAATAGTTCACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTCTTTCATCTCTGCCTaGGCAGGTGCCCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVSFISA*AGAPPL
Trigger: CAAGGGAGGGGCACCTGCCAAGGCAGAGATGAAAGA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGAGAGGTTTGTGTGACTaGCCGTCCAAATCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWRGLCD*PSKSLS
Trigger: GGACAGAGATTTGGACGGCAAGTCACACAAACCTCT...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGGAAGAGCTGTCCTTTaGTGCGGACGTCTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVGRAVL*CGRLQA
Trigger: GGCCTGAAGACGTCCGCACAAAAGGACAGCTCTTCC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGCTTTCCATGTGGGCTTaGGAGCCAAATCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWLSMWA*EPNLLI
Trigger: AATTAAAAGATTTGGCTCCAAAGCCCACATGGAAAG...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGATCTCTAGGAGCATGTaGGACACGGCGGGGAGGCCG +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGISRSM*DTAGRP
Trigger: CGGCCTCCCCGCCGTGTCCAACATGCTCCTAGAGAT...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCGGTCTTGGCATAAGCTaGCGATTTGCCTGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSGLGIS*RFACLC
Trigger: ACAGAGACAGGCAAATCGCAAGCTTATGCCAAGACC...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGGTCTTGGCATAAGCTaGCGATTTGCCTGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIGLGIS*RFACLC
Trigger: ACAGAGACAGGCAAATCGCAAGCTTATGCCAAGACC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGCCTTGAAGACCTTCTaGGCCCAGGTCCTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLALKTF*AQVLKA
Trigger: GGCTTTCAGGACCTGGGCCAAGAAGGTCTTCAAGGC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATACTCCTGCAAACCCTaGCTGAGGACCAGCAGACGC +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGYSCKP*LRTSRR
Trigger: GCGTCTGCTGGTCCTCAGCAAGGGTTTGCAGGAGTA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCATGCGCTGGATGGCTTaGAGGACATCAGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCMRWMA*RTSAAM
Trigger: CATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCAT...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCACTGGCTCAGAGAGCTaGTGCCTAGTTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGTGSES*CLVPAA
Trigger: GGCTGCAGGAACTAGGCACAAGCTCTCTGAGCCAGT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTACTGGCTCAGAGAGCTaGTGCCTAGTTCCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: NRLPLREELHRLQFLPKTTGSES*CLVPAA
Trigger: GGCTGCAGGAACTAGGCACAAGCTCTCTGAGCCAGT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCCAGGGACACGTTTCTaGGCATTGAGGGTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWPGTRF*ALRVFN
Trigger: ATTGAAGACCCTCAATGCCAAGAAACGTGTCCCTGG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAAGTGGGAAGATCCTTATaGCCACCAGGCTTCTTTGAA +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQVGRSL*PPGFFE
Trigger: TTCAAAGAAGCCTGGTGGCAATAAGGATCTTCCCAC...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCCCTTTGGGGTCTTGGTGCCCCCACTGTAAAGCCCTTTCAAAGAGGGCCAGTGGAGAGGAACTGTGTTTaGCTTATCTCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: ALWGLGAPTVKPFQRGPVERNCV*LISANC
Trigger: GCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTC...CACTGGCCCTCTTTGAAAGGGCTTTACAGTGGGGGCACCAAGACCCCAAAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCAGGCAGAAGAATCACTaGAACTGGGGGAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSRQKNH*NWGRQR
Trigger: CCTCTGCCTCCCCCAGTTCAAGTGATTCTTCTGCCT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCACCTCTCACTTGTTTaGAGCTTAGGGCAAGACCTG +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSHLSLV*SLGQDL
Trigger: CAGGTCTTGCCCTAAGCTCAAAACAAGTGAGAGGTG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCATAACGGACTGTGTTTaGGGCCAGACGGGCATAGCC +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSITDCV*GQTGIA
Trigger: GGCTATGCCCGTCTGGCCCAAAACACAGTCCGTTAT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTGCATGGAGGCAGATTaGTTCCCGCCTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGCMEAD*FPPARA
Trigger: GGCCCTGGCAGGCGGGAACAAATCTGCCTCCATGCA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGCCTGGGAGGGGTTTTaGAAAGCATACTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLAWEGF*KAYCPP
Trigger: GGGAGGGCAGTATGCTTTCAAAAACCCCTCCCAGGC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp AAGAGCTGTCCTTTTGTGCGGACGTCTTCAGGCCTCCTTGCATGCTaGGAAGGATGCATGATGGAGCCCATGCAGATGTACTCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: KSCPFVRTSSGLLAC*EGCMMEPMQMYSVH
Trigger: ATGCACTGAGTACATCTGCATGGGCTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACGTCCGCACAAAAGGACAGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCACAGGCTCTATCTCCTaGAGCAGTTCATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSTGSIS*SSSLFS
Trigger: GGAGAACAATGAACTGCTCAAGGAGATAGAGCCTGT...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCAGGAAGCGTGGACACTaGGAGGGGCTGCCATTCTTT +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLRKRGH*EGLPFF
Trigger: AAAGAATGGCAGCCCCTCCAAGTGTCCACGCTTCCT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTCCCAGTTCTTGACCTaGAGGAAGCGTGGACACTTG +
Preference number: 5 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCSQFLT*RKRGHL
Trigger: CAAGTGTCCACGCTTCCTCAAGGTCAAGAACTGGGA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTTCAGCCCCAGGTCCTaGAACCACTCAAACTTGGGG +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVFSPRS*NHSNLG
Trigger: CCCCAAGTTTGAGTGGTTCAAGGACCTGGGGCTGAA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTTCAGCCCCAGGTCCTaGAACCACTCAAACTTGGGG +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLFSPRS*NHSNLG
Trigger: CCCCAAGTTTGAGTGGTTCAAGGACCTGGGGCTGAA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATCTAAGTTCATCTTCTaGGCCACTTCCTCCAGGATA +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQSKFIF*ATSSRI
Trigger: TATCCTGGAGGAAGTGGCCAAGAAGATGAACTTAGA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCATCAAAGGCGTGTTaGAAGATCTCACACAAGGTC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEASKAC*KISHKV
Trigger: GACCTTGTGTGAGATCTTCAAACACGCCTTTGATGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCAAGGTGAGGCGGAACTaGTTTCTCTTCCAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSKVRRN*FLFQLR
Trigger: TCGCAGCTGGAAGAGAAACAAGTTCCGCCTCACCTT...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGCTGAGACTCGCTTTTaGTGGACATTGGATAGACCT +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEAETRF*WTLDRP
Trigger: AGGTCTATCCAATGTCCACAAAAAGCGAGTCTCAGC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCGCTGAGACTCGCTTTTaGTGGACATTGGATAGACCT +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIAETRF*WTLDRP
Trigger: AGGTCTATCCAATGTCCACAAAAAGCGAGTCTCAGC...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGACGAGGTCCTCGTGGTaGCCAGGGAAGACACCCAGG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLTRSSW*PGKTPR
Trigger: CCTGGGTGTCTTCCCTGGCAACCACGAGGACCTCGT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGACGATGGTGGGGTTCTaGCCCCATTTCCATTCCTCG +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVTMVGF*PHFHSS
Trigger: CGAGGAATGGAAATGGGGCAAGAACCCCACCATCGT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTCCTCATGGTATCGGTaGTCATCCCTCATCCGGCTG +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLSSWYR*SSLIRL
Trigger: CAGCCGGATGAGGGATGACAACCGATACCATGAGGA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTCCTCATGGTATCGGTaGTCATCCCTCATCCGGCTG +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGSSWYR*SSLIRL
Trigger: CAGCCGGATGAGGGATGACAACCGATACCATGAGGA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCTGGTATGGGTGGGTTaGGGGAGGGGATTTGCACAA +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLLVWVG*GRGFAQ
Trigger: TTGTGCAAATCCCCTCCCCAAACCCACCCATACCAG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCTGGTATGGGTGGGTTaGGGGAGGGGATTTGCACAA +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGLVWVG*GRGFAQ
Trigger: TTGTGCAAATCCCCTCCCCAAACCCACCCATACCAG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CGTGGGGTGGGCGTCAGTCCTTCAAGGAAGGTGCTGGAGCACAGGGACACTTGGTATTGTTACTTGATATaGTTTCCAGGCACCAAAGCT +
Preference number: 5 (lower is better)
Translates to: RGVGVSPSRKVLEHRDTWYCYLI*FPGTKA
Trigger: AGCTTTGGTGCCTGGAAACAATATCAAGTAACAATA...CCAAGTGTCCCTGTGCTCCAGCACCTTCCTTGAAGGACTGACGCCCACCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CCAGTGGTTTCATGCACCCGTGAGTTGCCCTTGTCGGCAAGAGAGGGAGTGGGAAACAGGTTTAAAACTTaGGAGATCAACTGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PVVSCTRELPLSAREGVGNRFKT*EINCRG
Trigger: CCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGTT...TCCCACTCCCTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGAAACCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGGGCATTTCGTGGGCATaGTCTCATTCAATCCACCTT +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEGISWA*SHSIHL
Trigger: AAGGTGGATTGAATGAGACAATGCCCACGAAATGCC...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGTCCCTCACTCAAGCCTaGGTTGCAGCAATAACCCCC +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVSLTQA*VAAITP
Trigger: GGGGGTTATTGCTGCAACCAAGGCTTGAGTGAGGGA...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGTGGGCATGGCTGGACTaGGGAAGGATTCACCCTGTT +
Preference number: 5 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRWAWLD*GRIHPV
Trigger: AACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCA...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGCTCAGGCATCTGGATaGCCCATCCTATTAGGACCA +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKAQASG*PILLGP
Trigger: TGGTCCTAATAGGATGGGCAATCCAGATGCCTGAGC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCGCTCAGGCATCTGGATaGCCCATCCTATTAGGACCA +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSAQASG*PILLGP
Trigger: TGGTCCTAATAGGATGGGCAATCCAGATGCCTGAGC...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCATAACGGACTGTGTTTaGGGCCAGACGGGCATAGCC +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGITDCV*GQTGIA
Trigger: GGCTATGCCCGTCTGGCCCAAAACACAGTCCGTTAT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CAGGCCCCTTGGATGCTATTGCTGGAGGAGGGGGTCAGTCAATGGATGTGGCAATGTCTGATGACATACTaGATTGTTACCGTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: QAPWMLLLEEGVSQWMWQCLMTY*IVTVGR
Trigger: CCTGCCAACGGTAACAATCAAGTATGTCATCAGACA...TTGCCACATCCATTGACTGACCCCCTCCTCCAGCAATAGCATCCAAGGGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp TGGGACGTGTCCCTAAGGTCAGGCAGAAAGGGGAGGAGATGCGTCTaGTGGCTGTGTCTAGAAGTGACGCATGATAGATGTGAACTATTC +
Preference number: 5 (lower is better)
Translates to: WDVSLRSGRKGRRCV*WLCLEVTHDRCELF
Trigger: GAATAGTTCACATCTATCATGCGTCACTTCTAGACACAGCCATCAGACGCATCTCCTCCCCTTTCTGCCTGACCTTAGGGACACGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 90 bp AGAAACGCAAGGGTTCCGGGTACTTCCTTTCTTCCTGCACAGAGTTaGGGTGCCTCATTTCCATCAAAGCACAGCCGAATTTCTCCCCAT +
Preference number: 5 (lower is better)
Translates to: RNARVPGTSFLPAQS*GASFPSKHSRISPH
Trigger: ATGGGGAGAAATTCGGCTGTGCTTTGATGGAAATGAGGCACCCCAACTCTGTGCAGGAAGAAAGGAAGTACCCGGAACCCTTGCGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTCAGTCTCCCAGTTCTaGACCTTGAGGAAGCGTGGA +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGSVSQF*TLRKRG
Trigger: TCCACGCTTCCTCAAGGTCAAGAACTGGGAGACTGA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTCTGTGAACTGCACATaGGCTGGGTCCCCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSVNCT*AGSPRV
Trigger: CACCCTGGGGGACCCAGCCAATGTGCAGTTCACAGA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTAGCTTGGCCGAGAACTaGACAGCTTCTGCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: NRLPLREELHRLQFLPKTSLAEN*TASASF
Trigger: GAAGCTAGCAGAAGCTGTCAAGTTCTCGGCCAAGCT...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCTCCATGGACATCACCTaGGCATCAAAGGCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCSMDIT*ASKACL
Trigger: CAAACACGCCTTTGATGCCAAGGTGATGTCCATGGA...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTCCATGGACATCACCTaGGCATCAAAGGCGTGTTTG +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSMDIT*ASKACL
Trigger: CAAACACGCCTTTGATGCCAAGGTGATGTCCATGGA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTCTTCCTGCACAGAGTaGGGGTGCCTCATTTCCATC +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLSSCTE*GCLISI
Trigger: GATGGAAATGAGGCACCCCAACTCTGTGCAGGAAGA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCCAGCACTCTCAAAGTaGTCTCTGAGGTCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGPALSK*SLRSGP
Trigger: TGGGCCCGACCTCAGAGACAACTTTGAGAGTGCTGG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGTTGGCCTTTTCAATGTaGACATCATCTCCCACACAG +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLAFSM*TSSPTQ
Trigger: CTGTGTGGGAGATGATGTCAACATTGAAAAGGCCAA...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGACTTTCACCATCTGGTaGACAGGCGGCGCGTCCTCC +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLTFTIW*TGGASS
Trigger: GGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTACTCCTGCAAACCCTaGCTGAGGACCAGCAGACGC +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGYSCKP*LRTSRR
Trigger: GCGTCTGCTGGTCCTCAGCAAGGGTTTGCAGGAGTA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCTGCTGAAAGCGTGTTaGGTCAGAAGATTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWLLKAC*VRRFCV
Trigger: AACACAGAATCTTCTGACCAAACACGCTTTCAGCAG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCTGTCTGATGACATACTaGATTGTTACCGTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSCLMTY*IVTVGR
Trigger: CCTGCCAACGGTAACAATCAAGTATGTCATCAGACA...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAGGAGCACAGGGACACTaGGCAGAGATTAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGGAQGH*AEISSI
Trigger: AATGCTGCTAATCTCTGCCAAGTGTCCCTGTGCTCC...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGGACATTGGGCTGGATTaGCTGAACACCGAACATGTG +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVDIGLD*LNTEHV
Trigger: CACATGTTCGGTGTTCAGCAAATCCAGCCCAATGTC...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCCCCCAACTTTGCGCTaGAAGAGACGAACAGAAATG +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLPPTLR*KRRTEM
Trigger: CATTTCTGTTCGTCTCTTCAAGCGCAAAGTTGGGGG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTACCAAGGGCCGGCCGTaGACCGCAAGAATGATGTCT +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSTKGRP*TARMMS
Trigger: AGACATCATTCTTGCGGTCAACGGCCGGCCCTTGGT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTCTGAATATGGGTTGTaGAGGACGACAGGCACATTG +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSEYGL*RTTGTL
Trigger: CAATGTGCCTGTCGTCCTCAACAACCCATATTCAGA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCTTGAACCACTCAAACTaGGGGTGCCTGATGGGAACT +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGLNHSN*GCLMGT
Trigger: AGTTCCCATCAGGCACCCCAAGTTTGAGTGGTTCAA...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTTTGTGGGGGTCCCGTaGGTGCCTTTCCAGACATGC +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLFVGVP*VPFQTC
Trigger: GCATGTCTGGAAAGGCACCAACGGGACCCCCACAAA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGACTGAGAACCTCACATaGGCCAGGGGTCCAGCACTC +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMTENLT*ARGPAL
Trigger: GAGTGCTGGACCCCTGGCCAATGTGAGGTTCTCAGT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCTTGCTGATGAGGGAATaGTTGGCCTTTTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPILLMRE*LAFSML
Trigger: CAACATTGAAAAGGCCAACAATTCCCTCATCAGCAA...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGGGCTCTGGAGGTTTaGACGGCTAAGGAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKRALEV*TAKEPG
Trigger: GCCCGGCTCCTTAGCCGTCAAAACCTCCAGAGCCCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGCTCCTGGCTCCCGTaGGTGTGGAGACGCACGAAG +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSSWLP*VWRRTK
Trigger: CTTCGTGCGTCTCCACACCAACGGGAGCCAGGAGCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGCAGGGGTTCATTCCTTaGTGTTGGATATCAAATTGC +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWEQGFIP*CWISNC
Trigger: GCAATTTGATATCCAACACAAAGGAATGAACCCCTG...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAAGACCCCCTTGTTCTaGGCCTGCAGGGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMKTPLF*ACRVSS
Trigger: GGAAGAGACCCTGCAGGCCAAGAACAAGGGGGTCTT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTCTCTGAAGACCCCCTaGTTCTTGGCCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSSLKTP*FLACRV
Trigger: GACCCTGCAGGCCAAGAACAAGGGGGTCTTCAGAGA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCCTGCACGTACTTCTTaGGTTTGTCTGGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMPARTS*VCLAPG
Trigger: CCCGGGAGCCAGACAAACCAAAGAAGTACGTGCAGG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGTCATCGGTGTCTTTTTaGCTCTCTTCAATGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESSVSF*LSSMKA
Trigger: TGCCTTCATTGAAGAGAGCAAAAAAGACACCGATGA...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGCCAGGGCCATCTCGTTAATAACGGACTGTGTTTTGGGCCAGACGGGCATAGCCAGATTAGAAAAGCATaGCATCGCAGCAGGAAAACT +
Preference number: 5 (lower is better)
Translates to: CQGHLVNNGLCFGPDGHSQIRKA*HRSRKT
Trigger: AGTTTTCCTGCTGCGATGCAATGCTTTTCTAATCTG...GCTATGCCCGTCTGGCCCAAAACACAGTCCGTTATTAACGAGATGGCCCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTCATGCACCCGTGAGTaGCCCTTGTCGGCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLSCTRE*PLSARE
Trigger: CTCTCTTGCCGACAAGGGCAACTCACGGGTGCATGA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCCAGGGACACGTTTCTaGGCATTGAGGGTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVPGTRF*ALRVFN
Trigger: ATTGAAGACCCTCAATGCCAAGAAACGTGTCCCTGG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCGGAATGCCTCTTTCATaGGGAGACAGCCCCTTTAAT +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSGMPLS*GDSPFN
Trigger: ATTAAAGGGGCTGTCTCCCAATGAAAGAGGCATTCC...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCACTCCACTCTGGTCCTaGAGAGGTTACTCAACAGAG +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGTPLWS*RGYSTE
Trigger: CTCTGTTGAGTAACCTCTCAAGGACCAGAGTGGAGT...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTCCCTCACTCAAGCCTaGGTTGCAGCAATAACCCCC +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSLTQA*VAAITP
Trigger: GGGGGTTATTGCTGCAACCAAGGCTTGAGTGAGGGA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACACCTCTCACTTGTTTaGAGCTTAGGGCAAGACCTG +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGHLSLV*SLGQDL
Trigger: CAGGTCTTGCCCTAAGCTCAAAACAAGTGAGAGGTG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTGGGGAACATCTATGTaGACTCCCTGGGAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSWGTSM*TPWEAG
Trigger: GCCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCACTGCTACAGGTATCTaGTGGATGGAGGCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLTATGI*WMEARN
Trigger: ATTCCTGGCCTCCATCCACAAGATACCTGTAGCAGT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAACTGCTACAGGTATCTaGTGGATGGAGGCCAGGAAT +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGTATGI*WMEARN
Trigger: ATTCCTGGCCTCCATCCACAAGATACCTGTAGCAGT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 90 bp CACAGGCATGGGATTCAAATCCTGATTCTGTCATTTACTGACACGTaGCTCGGTCAAGGGCTTCAGCATCTTGGTGCCTCCGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: HRHGIQILILSFTDT*LGQGLQHLGASVSS
Trigger: TGAAGAAACGGAGGCACCAAGATGCTGAAGCCCTTGACCGAGTCACGTGTCAGTAAATGACAGAATCAGGATTTGAATCCCATGCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS CCA 90 bp ATCCTATCATCACTGAAACGAATTAGCAGTGACGTCCAACCCGACTaGTTTATGGGTGTGGGGAGGGAGACGTCGCAACCCTCATTAAAA +
Preference number: 5 (lower is better)
Translates to: ILSSLKRISSDVQPD*FMGVGRETSQPSLK
Trigger: TTTTAATGAGGGTTGCGACGTCTCCCTCCCCACACCCATAAACCAGTCGGGTTGGACGTCACTGCTAATTCGTTTCAGTGATGATAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTCCTTGAGCAGTTCATaGTTCTCCCCTCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSLSSS*FSPLPW
Trigger: CCAAGGCAGAGGGGAGAACAATGAACTGCTCAAGGA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTAGGAAGCGTGGACACTaGGAGGGGCTGCCATTCTTT +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSRKRGH*EGLPFF
Trigger: AAAGAATGGCAGCCCCTCCAAGTGTCCACGCTTCCT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTCTAAGTTCATCTTCTaGGCCACTTCCTCCAGGATA +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSSKFIF*ATSSRI
Trigger: TATCCTGGAGGAAGTGGCCAAGAAGATGAACTTAGA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTACATCACAGGCTGCCTaGAAGACCTTCTTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSTSQAA*KTFLAQ
Trigger: CTGGGCCAAGAAGGTCTTCAAGGCAGCCTGTGATGT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCCGCTTTTTGTGGACATaGGATAGACCTTGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSRFLWT*DRPCVS
Trigger: ACTCACACAAGGTCTATCCAATGTCCACAAAAAGCG...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGACGATGGTGGGGTTCTaGCCCCATTTCCATTCCTCG +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMTMVGF*PHFHSS
Trigger: CGAGGAATGGAAATGGGGCAAGAACCCCACCATCGT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGTGTTGGATATCAAATaGCCGCTGTTGCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGVLDIK*PLLPEA
Trigger: AGCTTCTGGCAACAGCGGCAATTTGATATCCAACAC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTATGCGCTGGATGGCTTaGAGGACATCAGCAGCCATG +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSMRWMA*RTSAAM
Trigger: CATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCAT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAACCGCGCTTACAAAACTaGCAGCCGGCTGGGCAAGAG +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKPRLQN*QPAGQE
Trigger: CTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGG...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCTGCCACCAGGCTTCTTaGAACAACATAACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLCHQAS*NNITSR
Trigger: CCTGGAAGTTATGTTGTTCAAAGAAGCCTGGTGGCA...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTCTTCCCACCCCAAGTaGTGGCTCCTATCGAAGAAG +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGSSHPK*WLLSKK
Trigger: CTTCTTCGATAGGAGCCACAACTTGGGGTGGGAAGA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTAGAACCAGCAGAACATTCCCTTTCCATCCTTGGGGACCCTGCAGTCTGGGAGAGTAAATTCAACAGGTaGCCTCTTAGGGAGGAATTA +
Preference number: 5 (lower is better)
Translates to: VEPAEHSLSILGDPAVWESKFNR*PLREEL
Trigger: TAATTCCTCCCTAAGAGGCAACCTGTTGAATTTACT...CTCCCAGACTGCAGGGTCCCCAAGGATGGAAAGGGAATGTTCTGCTGGTTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCAGAGAGAGAGGCTTTaGGTATCAGGAATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGQRERL*VSGILA
Trigger: TGCCAGAATTCCTGATACCAAAAGCCTCTCTCTCTG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGGCATTTCGTGGGCATaGTCTCATTCAATCCACCTT +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLGISWA*SHSIHL
Trigger: AAGGTGGATTGAATGAGACAATGCCCACGAAATGCC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTGGGCATGGCTGGACTaGGGAAGGATTCACCCTGTT +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLWAWLD*GRIHPV
Trigger: AACAGGGTGAATCCTTCCCAAGTCCAGCCATGCCCA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGATGCCTGGCCTACTTTTaGAGCCAAAGAGGACATTTG +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGCLAYF*SQRGHL
Trigger: CAAATGTCCTCTTTGGCTCAAAAAGTAGGCCAGGCA...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCTTGGGGACCCTGCAGTCTGGGAGGCCACTAGGATTTCTTGTCTCTTTCTGGCCCTCGCACATGGCTTaGATAAGTATTAATAGGAAA +
Preference number: 5 (lower is better)
Translates to: SLGTLQSGRPLGFLVSFWPSHMA*ISINRK
Trigger: TTTCCTATTAATACTTATCAAAGCCATGTGCGAGGG...CCAGAAAGAGACAAGAAATCCTAGTGGCCTCCCAGACTGCAGGGTCCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCTAAGATCGACACACTTGTGCAGGGAAGAGGACGGACAGAGACCTGGCCCATCCCCTCGCACATGGCTTaGATAAGTATTAATAGGAAA +
Preference number: 5 (lower is better)
Translates to: SKIDTLVQGRGRTETWPIPSHMA*ISINRK
Trigger: TTTCCTATTAATACTTATCAAAGCCATGTGCGAGGG...GATGGGCCAGGTCTCTGTCCGTCCTCTTCCCTGCACAAGTGTGTCGATCTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACCCTCAAATCCCACTTaGGCAGCAGATAATGGAAAC +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGPSNPT*AADNGN
Trigger: GTTTCCATTATCTGCTGCCAAAGTGGGATTTGAGGG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCGGACACAGTGTCTTATaGAAACAGACTGCCATCCTC +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGGHSVL*KQTAIL
Trigger: GAGGATGGCAGTCTGTTTCAATAAGACACTGTGTCC...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp GAAGTGACGCATGATAGATGTGAACTATTCTCTGGGTATCTTCATTaGCAGCCTGTTAGATGCGGATCAGATCTGAGGCATCATGAGCCC +
Preference number: 5 (lower is better)
Translates to: EVTHDRCELFSGYLH*QPVRCGSDLRHHEP
Trigger: GGGCTCATGATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCAATGAAGATACCCAGAGAATAGTTCACATCTATCATGCGTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp CCAAAGGTGCTGGTGACCACAAGGACCAGAGTTTCATGTTCCAGGTaGACAATGTCATATTCTTCCATGGACATCACCTTGGCATCAAAG +
Preference number: 5 (lower is better)
Translates to: PKVLVTTRTRVSCSR*TMSYSSMDITLASK
Trigger: CTTTGATGCCAAGGTGATGTCCATGGAAGAATATGACATTGTGCACCTGGAACATGAAACTCTGGTCCTTGTGGTCACCAGCACCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 90 bp ATCTGGGCACAGATCACATGCTCAGTGTGGAGAGCTGTAGTTGTGTaGACATCCGTGTATATTTCTGCATTCACACGACGAATTCACGGA +
Preference number: 5 (lower is better)
Translates to: IWAQITCSVWRAVVV*TSVYISAFTRRIHG
Trigger: TCCGTGAATTCGTCGTGTGAATGCAGAAATATACACGGATGTGCACACAACTACAGCTCTCCACACTGAGCATGTGATCTGTGCCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS CCA 90 bp GTGTGGTTGTGGGGATTAATCTGGGCACAGATCACATGCTCAGTGTaGAGAGCTGTAGTTGTGTGCACATCCGTGTATATTTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: VWLWGLIWAQITCSV*RAVVVCTSVYISAF
Trigger: GAATGCAGAAATATACACGGATGTGCACACAACTACAGCTCTCCACACTGAGCATGTGATCTGTGCCCAGATTAATCCCCACAACCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTCCTTGAGCAGTTCATaGTTCTCCCCTCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSSLSSS*FSPLPW
Trigger: CCAAGGCAGAGGGGAGAACAATGAACTGCTCAAGGA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGGACGACAGGCACATaGCCCTTCCCCCATAGGTCA +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKRTTGT*PFPHRS
Trigger: TGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAGCTTCTGCTAGCTTCTaGAAGCCAATGGCTCGCCGC +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKASASF*KPMARR
Trigger: GCGGCGAGCCATTGGCTTCAAGAAGCTAGCAGAAGC...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGCTTGGCCGAGAACTaGACAGCTTCTGCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSLAEN*TASASF
Trigger: GAAGCTAGCAGAAGCTGTCAAGTTCTCGGCCAAGCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCGCTTTTTGTGGACATaGGATAGACCTTGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGRFLWT*DRPCVS
Trigger: ACTCACACAAGGTCTATCCAATGTCCACAAAAAGCG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGATACGCCGTGGTGAATaGGTCCTTCTCCATCTCGAG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLIRRGE*VLLHLE
Trigger: CTCGAGATGGAGAAGGACCAATTCACCACGGCGTAT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGTTCATTCCTTTGTGTaGGATATCAAATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKVHSFV*DIKLPL
Trigger: CAGCGGCAATTTGATATCCAACACAAAGGAATGAAC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGATGATCTATCTTGGATaGCCGGCACCCGAAGACCAG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLMIYLG*PAPEDQ
Trigger: CTGGTCTTCGGGTGCCGGCAATCCAAGATAGATCAT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGAACACGTTTCTTGGCATaGAGGGTCTTCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGTRFLA*RVFNES
Trigger: GCTTTCATTGAAGACCCTCAATGCCAAGAAACGTGT...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGGTGAAGCAGCTTGTGTaGGGGATTGAAAGGTGTTTA +
Preference number: 5 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRVKQLV*GIERCL
Trigger: TAAACACCTTTCAATCCCCAACACAAGCTGCTTCAC...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTACAGACAGAAGGCTTaGAGGACATGGTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLYRQKA*RTWWPQ
Trigger: CTGTGGCCACCATGTCCTCAAAGCCTTCTGTCTGTA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGCCTGGGTCCTTACATTaGGGGAAGGGCAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMPGSLH*GKGSFS
Trigger: AGAAAAGCTGCCCTTCCCCAAATGTAAGGACCCAGG...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGGAGCACAGGGACACTaGGCAGAGATTAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSGAQGH*AEISSI
Trigger: AATGCTGCTAATCTCTGCCAAGTGTCCCTGTGCTCC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCTGAGGTTCCCTTTGTaGGTGGCATACTTGACATGG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLLRFPL*VAYLTW
Trigger: CCATGTCAAGTATGCCACCAACAAAGGGAACCTCAG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GGAGCTGGAAATGGGTTTGCAGGAAAGGAGTTTAGAATGGGCTTCCCTTCAGGACTGATGAGGGAATTGTaGGCCTTTTCAATGTTGACA +
Preference number: 5 (lower is better)
Translates to: GAGNGFAGKEFRMGFPSGLMREL*AFSMLT
Trigger: TGTCAACATTGAAAAGGCCAACAATTCCCTCATCAG...TCCTGAAGGGAAGCCCATTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCTGATGAGGGAATTGTaGGCCTTTTCAATGTTGACA +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGLMREL*AFSMLT
Trigger: TGTCAACATTGAAAAGGCCAACAATTCCCTCATCAG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGTTCCAGCTGCGATCATaGCTGATGAGGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGFQLRS*LMRELL
Trigger: CAACAATTCCCTCATCAGCAATGATCGCAGCTGGAA...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGATCAAATTGCCGCTGTaGCCAGAAGCTTCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLIKLPL*PEASER
Trigger: CCTTTCCGAAGCTTCTGGCAACAGCGGCAATTTGAT...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCGTTCATTCCTTTGTGTaGGATATCAAATTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLVHSFV*DIKLPL
Trigger: CAGCGGCAATTTGATATCCAACACAAAGGAATGAAC...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGCAGGGGTTCATTCCTTaGTGTTGGATATCAAATTGC +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVQGFIP*CWISNC
Trigger: GCAATTTGATATCCAACACAAAGGAATGAACCCCTG...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCAGGAACAGGTTTAAAACTTaGGAGATCAACTGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: KVKSLFMGNIYVDSLGGRNRFKT*EINCRG
Trigger: CCCTCTGCAGTTGATCTCCAAAGTTTTAAACCTGTT...CCTGCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGAGTAAATTCAACAGGTaGCCTCTTAGGGAGGAATTA +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKSKFNR*PLREEL
Trigger: TAATTCCTCCCTAAGAGGCAACCTGTTGAATTTACT...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGGAAGCACTGATCAATTaGTCTTTAATGGGGATTGGA +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKEALIN*SLMGIG
Trigger: TCCAATCCCCATTAAAGACAAATTGATCAGTGCTTC...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGCAGAGAGAGAGGCTTTaGGTATCAGGAATTCTGGCA +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGQRERL*VSGILA
Trigger: TGCCAGAATTCCTGATACCAAAAGCCTCTCTCTCTG...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 90 bp AATGGAATTGTGTGGTTGTGGGGATTAATCTGGGCACAGATCACATaGTCAGTGTGGAGAGCTGTAGTTGTGTGCACATCCGTGTATATT +
Preference number: 5 (lower is better)
Translates to: NGIVWLWGLIWAQIT*SVWRAVVVCTSVYI
Trigger: AATATACACGGATGTGCACACAACTACAGCTCTCCACACTGAGCATGTGATCTGTGCCCAGATTAATCCCCACAACCACACAATTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTTCTCTGAATATGGGTaGTTGAGGACGACAGGCACA +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMFSEYG*LRTTGT
Trigger: TGTGCCTGTCGTCCTCAACAACCCATATTCAGAGAA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATCCCAGTTCTTGACCTaGAGGAAGCGTGGACACTTG +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSQFLT*RKRGHL
Trigger: CAAGTGTCCACGCTTCCTCAAGGTCAAGAACTGGGA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCCTTTCCATGTGGGCTTaGGAGCCAAATCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLLSMWA*EPNLLI
Trigger: AATTAAAAGATTTGGCTCCAAAGCCCACATGGAAAG...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTTCCAGCTGCGATCATaGCTGATGAGGGAATTGTTG +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMFQLRS*LMRELL
Trigger: CAACAATTCCCTCATCAGCAATGATCGCAGCTGGAA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGGTGTTGGATATCAAATaGCCGCTGTTGCCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLVLDIK*PLLPEA
Trigger: AGCTTCTGGCAACAGCGGCAATTTGATATCCAACAC...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp CTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTCCACACACTGGAGAAGTATTGTTACTTGATATaGTTTCCAGGCACCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LCFAYLCKLPGAFHTLEKYCYLI*FPGTKA
Trigger: AGCTTTGGTGCCTGGAAACAATATCAAGTAACAATA...CTTCTCCAGTGTGTGGAAGGCACCGGGCAGTTTGCAGAGATAAGCAAAACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GTTGTGGCTCCTATCGAAGAAGCCACGTGGGACCTCATTATGGCAACTCTTTCCTGGGATGCTAAGTGTTaGTTCTTTATATCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: VVAPIEEATWDLIMATLSWDAKC*FFISVE
Trigger: TTCCACAGATATAAAGAACAAACACTTAGCATCCCA...GGAAAGAGTTGCCATAATGAGGTCCCACGTGGCTTCTTCGATAGGAGCCACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATTAGAAAAGCATTGCATCGCAGCAGGAAAACTCAAGGAGTAAACCCAGGAGGGGAGCTGGAAATGGGTTaGCAGGAAAGGAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: IRKALHRSRKTQGVNPGGELEMG*QERSLE
Trigger: TTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTC...CCCTCCTGGGTTTACTCCTTGAGTTTTCCTGCTGCGATGCAATGCTTTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TCCAAAGTCAAATCCCTGTTCATGGGGAACATCTATGTTGACTCCCTGGGAGGCCAAAGCTATAAAGGATaGGAAAGAAAGCCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SKVKSLFMGNIYVDSLGGQSYKG*ERKPLG
Trigger: TCCCAAAGGCTTTCTTTCCAATCCTTTATAGCTTTG...GCCTCCCAGGGAGTCAACATAGATGTTCCCCATGAACAGGGATTTGACTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AACAGGTTGCCTCTTAGGGAGGAATTACACCGGCTCCAATTCCTACCGAAGACTCAAAGCTATAAAGGATaGGAAAGAAAGCCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: NRLPLREELHRLQFLPKTQSYKG*ERKPLG
Trigger: TCCCAAAGGCTTTCTTTCCAATCCTTTATAGCTTTG...AGTCTTCGGTAGGAATTGGAGCCGGTGTAATTCCTCCCTAAGAGGCAACCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTGCATAAAGCTTGACTaGGAGTGGGAAGCACTGATC +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSCIKLD*EWEALI
Trigger: GATCAGTGCTTCCCACTCCAAGTCAAGCTTTATGCA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ACCTTCTGCACGAGAGGAACTGTGTTTTGCTTATCTCTGCAAACTGCCCGGTGCCTTGACCAGAACTGTTaGGGTATTTTAGAACAAAAC +
Preference number: 5 (lower is better)
Translates to: TFCTRGTVFCLSLQTARCLDQNC*GILEQN
Trigger: GTTTTGTTCTAAAATACCCAAACAGTTCTGGTCAAG...GCACCGGGCAGTTTGCAGAGATAAGCAAAACACAGTTCCTCTCGTGCAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AGCTACCGCGCCCAGCCTGCAAGATGCTTTAATTTCTCCTTTATTCTCACCCTCAAGGTGAGTCATAGATaGCCTTTTCACTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: SYRAQPARCFNFSFILTLKVSHR*PFHFNS
Trigger: ACTGTTAAAGTGAAAAGGCAATCTATGACTCACCTT...GAGGGTGAGAATAAAGGAGAAATTAAAGCATCTTGCAGGCTGGGCGCGGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGAGCTGGAAATGGGTTaGCAGGAAAGGAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSELEMG*QERSLE
Trigger: TTCTAAACTCCTTTCCTGCAAACCCATTTCCAGCTC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TTGGCAGCAGATAATGGAAACAACCACTGGGCTAGGCAAAGTTTCTGCTGCGTGAGCTTGTGTTGGGGATaGAAAGGTGTTTACTTAAAA +
Preference number: 5 (lower is better)
Translates to: LAADNGNNHWARQSFCCVSLCWG*KGVYLK
Trigger: TTTTAAGTAAACACCTTTCAATCCCCAACACAAGCT...CACGCAGCAGAAACTTTGCCTAGCCCAGTGGTTGTTTCCATTATCTGCTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGTCCCAAAATTCCATATaGATGGGTCTGAAGTGTCCC +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLSQNSI*MGLKCP
Trigger: GGGACACTTCAGACCCATCAATATGGAATTTTGGGA...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGAGCCAAAGAGGACATTaGGATGCAGGAGACTATGAA +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMSQRGH*DAGDYE
Trigger: TTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGCT...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTTTGCTGATGAGGGAATaGTTGGCCTTTTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSLLMRE*LAFSML
Trigger: CAACATTGAAAAGGCCAACAATTCCCTCATCAGCAA...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTGATTTGCACAATCCATaGGATGGGTTCATGTCACAT +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSDLHNP*DGFMSH
Trigger: ATGTGACATGAACCCATCCAATGGATTGTGCAAATC...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAATTGGCCTTTTCAATGTaGACATCATCTCCCACACAG +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKLAFSM*TSSPTQ
Trigger: CTGTGTGGGAGATGATGTCAACATTGAAAAGGCCAA...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAACACGTTTCTTGGCATaGAGGGTCTTCAATGAAAGC +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKTRFLA*RVFNES
Trigger: GCTTTCATTGAAGACCCTCAATGCCAAGAAACGTGT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGCCAAAGAGGACATTaGGATGCAGGAGACTATGAA +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSQRGH*DAGDYE
Trigger: TTCATAGTCTCCTGCATCCAAATGTCCTCTTTGGCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp TGGTCCTTGAGAGGTTACTCAACAGAGAGAGAGGCTTTTGGTATCAGGAATTCTAAGGTGAGTCATAGATaGCCTTTTCACTTTAACAGT +
Preference number: 5 (lower is better)
Translates to: WSLRGYSTEREAFGIRNSKVSHR*PFHFNS
Trigger: ACTGTTAAAGTGAAAAGGCAATCTATGACTCACCTT...AGAATTCCTGATACCAAAAGCCTCTCTCTCTGTTGAGTAACCTCTCAAGGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp AATTTCCCACTCCTCTCCCCATGCCCTGAACCCTTTCTAACTAGAACAATTATGTGGGATGCTAAGTGTTaGTTCTTTATATCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: NFPLLSPCPEPFLTRTIMWDAKC*FFISVE
Trigger: TTCCACAGATATAAAGAACAAACACTTAGCATCCCA...CATAATTGTTCTAGTTAGAAAGGGTTCAGGGCATGGGGAGAGGAGTGGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp GCTTACCCATTGCTTAATTCTATTTTGCACTTAAACGGTTGGCTACGAGGCCTGCTTGACCAGAACTGTTaGGGTATTTTAGAACAAAAC +
Preference number: 5 (lower is better)
Translates to: AYPLLNSILHLNGWLRGLLDQNC*GILEQN
Trigger: GTTTTGTTCTAAAATACCCAAACAGTTCTGGTCAAG...CAGGCCTCGTAGCCAACCGTTTAAGTGCAAAATAGAATTAAGCAATGGGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS-3UTR CAA 90 bp ATAAGTATTAATAGGAAACAGACTCTCGACAGACACTGCTTTCCACGGGTGAAAAGCTTGTGTTGGGGATaGAAAGGTGTTTACTTAAAA +
Preference number: 5 (lower is better)
Translates to: ISINRKQTLDRHCFPRVKSLCWG*KGVYLK
Trigger: TTTTAAGTAAACACCTTTCAATCCCCAACACAAGCT...TTTCACCCGTGGAAAGCAGTGTCTGTCGAGAGTCTGTTTCCTATTAATACTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 72 bp CTGAGGCCCATTCCCGGGACCCGAGGCCCCATCCACTaGCAGGGGCTGTTCTTTGCCGGCCGGTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LRPIPGTRGPIH*QGLFFAGRWLV
Trigger: CACCAGCCACCGGCCGGCAAAGAACAGCCCCTGGCAGTGGATGGGGCCTCGGGTCCCGGGAATGGGCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CGGCCGGTGGCTGGTGGGACAGATCCACGGCTTTGGTaGGGGGACCCAGGGGCTGTGTCACCCGGATGGTCT +
Preference number: 6 (lower is better)
Translates to: RPVAGGTDPRLW*GDPGAVSPGWS
Trigger: AGACCATCCGGGTGACACAGCCCCTGGGTCCCCCCACCAAAGCCGTGGATCTGTCCCACCAGCCACCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp GACCCGAGGCCCCATCCACTGCCAGGGGCTGTTCTTTaGCGGCCGGTGGCTGGTGGGACAGATCCACGGCTT +
Preference number: 6 (lower is better)
Translates to: DPRPHPLPGAVL*RPVAGGTDPRL
Trigger: AAGCCGTGGATCTGTCCCACCAGCCACCGGCCGGCAAAGAACAGCCCCTGGCAGTGGATGGGGCCTCGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp GGCCGGCCGTTGACCGCAAGAATGATGTCTCCGGCCTaGATGAGGCCACTCTGCTCTGCGGCGCCCCCACGA +
Preference number: 6 (lower is better)
Translates to: GRPLTARMMSPA*MRPLCSAAPPR
Trigger: TCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCATTCTTGCGGTCAACGGCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp GCCGCTCGATCAGGGCATTCACGAGGTCCTCGTGGTTaGCAGGGAAGACACCCAGGTGGTCCCCAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: AARSGHSRGPRG*QGRHPGGPQAG
Trigger: ACCAGCCTGGGGACCACCTGGGTGTCTTCCCTGGCAACCACGAGGACCTCGTGAATGCCCTGATCGAGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp TCCAGCCGCTCGATCAGGGCATTCACGAGGTCCTCGTaGTTGCCAGGGAAGACACCCAGGTGGTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: SSRSIRAFTRSS*LPGKTPRWSPG
Trigger: GCCTGGGGACCACCTGGGTGTCTTCCCTGGCAACCACGAGGACCTCGTGAATGCCCTGATCGAGCGGCTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CTCCTGTGCTGGCTGTCACGGGCTGCAGCCAGACCGTaGACTTCTGTGTCACCATTGGGGAGGGGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: LLCWLSRAAARP*TSVSPLGRGGP
Trigger: AGGGCCTCCCCTCCCCAATGGTGACACAGAAGTCCACGGTCTGGCTGCAGCCCGTGACAGCCAGCACAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS CAA 72 bp AGCCGCTCGATCAGGGCATTCACGAGGTCCTCGTGGTaGCCAGGGAAGACACCCAGGTGGTCCCCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRSIRAFTRSSW*PGKTPRWSPGW
Trigger: CCAGCCTGGGGACCACCTGGGTGTCTTCCCTGGCAACCACGAGGACCTCGTGAATGCCCTGATCGAGCGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp TCCGCTCCTCCAGCAGTTCCACTTTCACCATCTGGTTaGCAGGCGGCGCGTCCTCCAGCCGCTCGATCAGGG +
Preference number: 6 (lower is better)
Translates to: SAPPAVPLSPSG*QAARPPAARSG
Trigger: CCCTGATCGAGCGGCTGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGAACTGCTGGAGGAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CCAGGCTTCAGGCTACACGGAGAGCAGGAGCCGGGGTaGCAGGTGCTGACAAGGCTTCAGCCCTCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: PGFRLHGEQEPG*QVLTRLQPSLS
Trigger: AGACAGAGAGGGCTGAAGCCTTGTCAGCACCTGTCACCCCGGCTCCTGCTCTCCGTGTAGCCTGAAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 72 bp ATCCCTCATCCGGCTGATGAATACGCCGGCGTCCTCTaGCGAGAGCTTCCCCTGCTGGGTCATGATGCGCTG +
Preference number: 6 (lower is better)
Translates to: IPHPADEYAGVL*RELPLLGHDAL
Trigger: CAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTATTCATCAGCCGGATGAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp GTGTTCCGCTCCTCCAGCAGTTCCACTTTCACCATCTaGTTGACAGGCGGCGCGTCCTCCAGCCGCTCGATC +
Preference number: 6 (lower is better)
Translates to: VFRSSSSSTFTI*LTGGASSSRSI
Trigger: GATCGAGCGGCTGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGAACTGCTGGAGGAGCGGAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp TTCCGCTCCTCCAGCAGTTCCACTTTCACCATCTGGTaGACAGGCGGCGCGTCCTCCAGCCGCTCGATCAGG +
Preference number: 6 (lower is better)
Translates to: FRSSSSSTFTIW*TGGASSSRSIR
Trigger: CCTGATCGAGCGGCTGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGAACTGCTGGAGGAGCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp AAAGCCGTGTTCCGCTCCTCCAGCAGTTCCACTTTCACCATCTGGTaGACAGGCGGCGCGTCCTCCAGCCGCTCGATCAGGGCATTCACG +
Preference number: 6 (lower is better)
Translates to: KAVFRSSSSSTFTIW*TGGASSSRSIRAFT
Trigger: CGTGAATGCCCTGATCGAGCGGCTGGAGGACGCGCCGCCTGTCAACCAGATGGTGAAAGTGGAACTGCTGGAGGAGCGGAACACGGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp ATCAGCAGCCATGGTGACGTCCCCACAGACGTATATGTGGCCCCCTaGCTCCTTCAGGGCTCGGTACACAGACTCCGCCAGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: ISSHGDVPTDVYVAP*LLQGSVHRLRQLLL
Trigger: CAGGAGCAGCTGGCGGAGTCTGTGTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGGGGACGTCACCATGGCTGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp GGACGACAGGCACATTGCCCTTCCCCCATAGGTCATTaGAGACTCGGTCGTTCTCCACGCCGAGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: GRQAHCPSPIGH*RLGRSPRRGAE
Trigger: CTCTGCCCCTCGGCGTGGAGAACGACCGAGTCTTCAATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp GCAAGAATGATGTCTCCGGCCTGGATGAGGCCACTCTaGTCTGCGGCGCCCCCACGAATCAGGTCAGAGATG +
Preference number: 6 (lower is better)
Translates to: ARMMSPAWMRPL*SAAPPRIRSEM
Trigger: CATCTCTGACCTGATTCGTGGGGGCGCCGCAGAGCAGAGTGGCCTCATCCAGGCCGGAGACATCATTCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp AGCCAATGGCTCGCCGCTTTGTGGGGGTCCCGTTGGTaGCTTTCCAGACATGCGTGTTCCAGGGATCAGGCT +
Preference number: 6 (lower is better)
Translates to: SQWLAALWGSRW*LSRHACSRDQA
Trigger: AGCCTGATCCCTGGAACACGCATGTCTGGAAAGGCACCAACGGGACCCCCACAAAGCGGCGAGCCATTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp ATGGTGACGTCCCCACAGACGTATATGTGGCCCCCTTaGTCCTTCAGGGCTCGGTACACAGACTCCGCCAGC +
Preference number: 6 (lower is better)
Translates to: MVTSPQTYMWPP*SFRARYTDSAS
Trigger: GCTGGCGGAGTCTGTGTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGGGGACGTCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp TTTGACGTCAGCTCAGCGTCACCCACTCATGGCTGGTaGCCCGTCGGTGGCATGATTTCCTGCATCCGCCTC +
Preference number: 6 (lower is better)
Translates to: FDVSSASPTHGW*PVGGMISCIRL
Trigger: GAGGCGGATGCAGGAAATCATGCCACCGACGGGCCACCAGCCATGAGTGGGTGACGCTGAGCTGACGTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 72 bp GTCTTTGACGTCAGCTCAGCGTCACCCACTCATGGCTaGTGGCCCGTCGGTGGCATGATTTCCTGCATCCGC +
Preference number: 6 (lower is better)
Translates to: VFDVSSASPTHG*WPVGGMISCIR
Trigger: GCGGATGCAGGAAATCATGCCACCGACGGGCCACCAGCCATGAGTGGGTGACGCTGAGCTGACGTCAAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 72 bp GGGCTGCAGCCAGACCGTGGACTTCTGTGTCACCATTaGGGAGGGGAGGCCCTTTACGGGGAAAGAAACGCA +
Preference number: 6 (lower is better)
Translates to: GLQPDRGLLCHH*GGEALYGERNA
Trigger: TGCGTTTCTTTCCCCGTAAAGGGCCTCCCCTCCCCAATGGTGACACAGAAGTCCACGGTCTGGCTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS CAA 72 bp CAGCCCTGCTGTATGCATATCTCTGTGAACTGCACATaGGCTGGGTCCCCCAGGGTGGAGCCGTCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: QPCCMHISVNCT*AGSPRVEPSGC
Trigger: GCAGCCTGACGGCTCCACCCTGGGGGACCCAGCCAATGTGCAGTTCACAGAGATATGCATACAGCAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp CATGGTGACGTCCCCACAGACGTATATGTGGCCCCCTaGCTCCTTCAGGGCTCGGTACACAGACTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: HGDVPTDVYVAP*LLQGSVHRLRQ
Trigger: CTGGCGGAGTCTGTGTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGGGGACGTCACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp TTCTCCTTCTCGCTGGTAGCTAGGGAGGCAAACTGCTaGAGCTGCAGAGGCGTTGGTGGCGTGGTGATGTCC +
Preference number: 6 (lower is better)
Translates to: FSFSLVAREANC*SCRGVGGVVMS
Trigger: GGACATCACCACGCCACCAACGCCTCTGCAGCTGCAGCAGTTTGCCTCCCTAGCTACCAGCGAGAAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp TGCTTCTCCTTCTCGCTGGTAGCTAGGGAGGCAAACTaGTGCAGCTGCAGAGGCGTTGGTGGCGTGGTGATG +
Preference number: 6 (lower is better)
Translates to: CFSFSLVAREAN*CSCRGVGGVVM
Trigger: CATCACCACGCCACCAACGCCTCTGCAGCTGCAGCAGTTTGCCTCCCTAGCTACCAGCGAGAAGGAGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp ATGAATACGCCGGCGTCCTCTGCCGAGAGCTTCCCCTaGTGGGTCATGATGCGCTGGATGGCTTTGAGGACA +
Preference number: 6 (lower is better)
Translates to: MNTPASSAESFP*WVMMRWMALRT
Trigger: TGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTATTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CTCAGCGTCACCCACTCATGGCTGGTGGCCCGTCGGTaGCATGATTTCCTGCATCCGCCTCTCTCCTTATTC +
Preference number: 6 (lower is better)
Translates to: LSVTHSWLVARR*HDFLHPPLSLF
Trigger: GAATAAGGAGAGAGGCGGATGCAGGAAATCATGCCACCGACGGGCCACCAGCCATGAGTGGGTGACGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 72 bp TCAGCAGCCATGGTGACGTCCCCACAGACGTATATGTaGCCCCCTTGCTCCTTCAGGGCTCGGTACACAGAC +
Preference number: 6 (lower is better)
Translates to: SAAMVTSPQTYM*PPCSFRARYTD
Trigger: GTCTGTGTACCGAGCCCTGAAGGAGCAAGGGGGCCACATATACGTCTGTGGGGACGTCACCATGGCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp TCTGCCGAGAGCTTCCCCTGCTGGGTCATGATGCGCTaGATGGCTTTGAGGACATCAGCAGCCATGGTGACG +
Preference number: 6 (lower is better)
Translates to: SAESFPCWVMMR*MALRTSAAMVT
Trigger: CGTCACCATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp AATACGCCGGCGTCCTCTGCCGAGAGCTTCCCCTGCTaGGTCATGATGCGCTGGATGGCTTTGAGGACATCA +
Preference number: 6 (lower is better)
Translates to: NTPASSAESFPC*VMMRWMALRTS
Trigger: TGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGAGGACGCCGGCGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp AGGACGACAGGCACATTGCCCTTCCCCCATAGGTCATaGAAGACTCGGTCGTTCTCCACGCCGAGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: RTTGTLPFPHRS*KTRSFSTPRGR
Trigger: TCTGCCCCTCGGCGTGGAGAACGACCGAGTCTTCAATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp AGCTTCCCCTGCTGGGTCATGATGCGCTGGATGGCTTaGAGGACATCAGCAGCCATGGTGACGTCCCCACAG +
Preference number: 6 (lower is better)
Translates to: SFPCWVMMRWMA*RTSAAMVTSPQ
Trigger: CTGTGGGGACGTCACCATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp CACAGGCTCTATCTCCTTGAGCAGTTCATTGTTCTCCCCTCTGCCTaGGAGGCTGACTCTGGTTGCTTTCTTCGCGGGGTCCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HRLYLLEQFIVLPSA*EADSGCFLRGVLAW
Trigger: CCAGGCCAGGACCCCGCGAAGAAAGCAACCAGAGTCAGCCTCCAAGGCAGAGGGGAGAACAATGAACTGCTCAAGGAGATAGAGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000618760.4
CDS CAA 90 bp GGGTTGTTGAGGACGACAGGCACATTGCCCTTCCCCCATAGGTCATaGAAGACTCGGTCGTTCTCCACGCCGAGGGGCAGAGGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: GLLRTTGTLPFPHRS*KTRSFSTPRGRGLC
Trigger: ACACAAACCTCTGCCCCTCGGCGTGGAGAACGACCGAGTCTTCAATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCCTCAACAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp GCTAGCTTCTTGAAGCCAATGGCTCGCCGCTTTGTGGGGGTCCCGTaGGTGCCTTTCCAGACATGCGTGTTCCAGGGATCAGGCTGGTAT +
Preference number: 6 (lower is better)
Translates to: ASFLKPMARRFVGVP*VPFQTCVFQGSGWY
Trigger: ATACCAGCCTGATCCCTGGAACACGCATGTCTGGAAAGGCACCAACGGGACCCCCACAAAGCGGCGAGCCATTGGCTTCAAGAAGCTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp TCTGCCGAGAGCTTCCCCTGCTGGGTCATGATGCGCTGGATGGCTTaGAGGACATCAGCAGCCATGGTGACGTCCCCACAGACGTATATG +
Preference number: 6 (lower is better)
Translates to: SAESFPCWVMMRWMA*RTSAAMVTSPQTYM
Trigger: CATATACGTCTGTGGGGACGTCACCATGGCTGCTGATGTCCTCAAAGCCATCCAGCGCATCATGACCCAGCAGGGGAAGCTCTCGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp CACAGGCTCTATCTCCTTGAGCAGTTCATTGTTCTCCCCTCTGCCTaGGAGGCTGACTCTGGTTGCTTTCTTCGCGGGGTCCTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: HRLYLLEQFIVLPSA*EADSGCFLRGVLPG
Trigger: CCCAGGCAGGACCCCGCGAAGAAAGCAACCAGAGTCAGCCTCCAAGGCAGAGGGGAGAACAATGAACTGCTCAAGGAGATAGAGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344089.4
CDS CAA 90 bp TTCTGTCATTTACTGACACGTGACTCGGTCAAGGGCTTCAGCATCTaGGTGCCTCCGTTTCTTCATCCCGTCCGCTCGGCCGCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: FCHLLTRDSVKGFSI*VPPFLHPVRSAAAR
Trigger: GCGAGCAGCGGCCGAGCGGACGGGATGAAGAAACGGAGGCACCAAGATGCTGAAGCCCTTGACCGAGTCACGTGTCAGTAAATGACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS CAA 90 bp ACTCTACCTGGGGGTTACCTGAACTGGCTTGGTCTTTATCTCGTGTaGCACCAGCACACCTGGGAAGCCCCTGGAGGACACCCTACCTCG +
Preference number: 6 (lower is better)
Translates to: TLPGGYLNWLGLYLV*HQHTWEAPGGHPTS
Trigger: CGAGGTAGGGTGTCCTCCAGGGGCTTCCCAGGTGTGCTGGTGCAACACGAGATAAAGACCAAGCCAGTTCAGGTAACCCCCAGGTAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS TCA 72 bp ATCTTCATTGCCAGCCTGTTAGATGCGGATCAGATCTaGGGCATCATGAGCCCGTCCGCTCGGCCGCTGCTC +
Preference number: 6 (lower is better)
Translates to: IFIASLLDADQI*GIMSPSARPLL
Trigger: GAGCAGCGGCCGAGCGGACGGGCTCATGATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCAATGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS TCA 72 bp GGTGCACTTCATCAGGGTACATGTCTGGGGAGGAGCTaGTGGAATAGTAGCGGGGCTGCAGCAGGGACAGCT +
Preference number: 6 (lower is better)
Translates to: GALHQGTCLGRS*WNSSGAAAGTA
Trigger: AGCTGTCCCTGCTGCAGCCCCGCTACTATTCCATCAGCTCCTCCCCAGACATGTACCCTGATGAAGTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CGAAACAGGGGACCAGTTCGTCAGCCTGTATCCGGTTaGGCCAGGAGGAGCATACGCCGTGGTGAATTGGTC +
Preference number: 6 (lower is better)
Translates to: RNRGPVRQPVSG*ARRSIRRGELV
Trigger: GACCAATTCACCACGGCGTATGCTCCTCCTGGCTCAACCGGATACAGGCTGACGAACTGGTCCCCTGTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp TTGGGGGTCCCATCACCTGTAAAGGTGGTCTCCAGGTaGGTGGTGAAACCTTCAGGGCCCCTCAGAATGAGG +
Preference number: 6 (lower is better)
Translates to: LGVPSPVKVVSR*VVKPSGPLRMR
Trigger: CCTCATTCTGAGGGGCCCTGAAGGTTTCACCACGCACCTGGAGACCACCTTTACAGGTGATGGGACCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp CGCTTTGTGGGGGTCCCGTTGGTGCCTTTCCAGACATaGGTGTTCCAGGGATCAGGCTGGTATTCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: RFVGVPLVPFQT*VFQGSGWYSKE
Trigger: CTCCTTCGAATACCAGCCTGATCCCTGGAACACGCATGTCTGGAAAGGCACCAACGGGACCCCCACAAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp GTGAAACCTTCAGGGCCCCTCAGAATGAGGACCACGTaGGTCTCAGAGGCAATGCCTCTGAGTACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VKPSGPLRMRTT*VSEAMPLSTSR
Trigger: CCTGGAGGTACTCAGAGGCATTGCCTCTGAGACCCACGTGGTCCTCATTCTGAGGGGCCCTGAAGGTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp AAGACTCGGTCGTTCTCCACGCCGAGGGGCAGAGGTTaGTGTGACTTGCCGTCCAAATCTCTGTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: KTRSFSTPRGRG*CDLPSKSLSTW
Trigger: CCAGGTGGACAGAGATTTGGACGGCAAGTCACACAAACCTCTGCCCCTCGGCGTGGAGAACGACCGAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp TTGAAGCCAATGGCTCGCCGCTTTGTGGGGGTCCCGTaGGTGCCTTTCCAGACATGCGTGTTCCAGGGATCA +
Preference number: 6 (lower is better)
Translates to: LKPMARRFVGVP*VPFQTCVFQGS
Trigger: TGATCCCTGGAACACGCATGTCTGGAAAGGCACCAACGGGACCCCCACAAAGCGGCGAGCCATTGGCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp AGCTTGGCCGAGAACTTGACAGCTTCTGCTAGCTTCTaGAAGCCAATGGCTCGCCGCTTTGTGGGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: SLAENLTASASF*KPMARRFVGVP
Trigger: CGGGACCCCCACAAAGCGGCGAGCCATTGGCTTCAAGAAGCTAGCAGAAGCTGTCAAGTTCTCGGCCAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp CTTGGCCTGCAGGGTCTCTTCCCTGTAGATATGATCTATCTTGGATaGCCGGCACCCGAAGACCAGGACCATGGGGCAGGGGTTCATTCC +
Preference number: 6 (lower is better)
Translates to: LGLQGLFPVDMIYLG*PAPEDQDHGAGVHS
Trigger: GGAATGAACCCCTGCCCCATGGTCCTGGTCTTCGGGTGCCGGCAATCCAAGATAGATCATATCTACAGGGAAGAGACCCTGCAGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CTCCATCTCGAGTGCGGTAGGAAACGATGGCCACAGTaGGGTGCACTTCATCAGGGTACATGTCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LHLECGRKRWPQ*GALHQGTCLGR
Trigger: CCTCCCCAGACATGTACCCTGATGAAGTGCACCTCACTGTGGCCATCGTTTCCTACCGCACTCGAGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CACCTCAGTCTCCCAGTTCTTGACCTTGAGGAAGCGTaGACACTTGGAGGGGCTGCCATTCTTTGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: HLSLPVLDLEEA*TLGGAAILCGG
Trigger: TCCCCCACAAAGAATGGCAGCCCCTCCAAGTGTCCACGCTTCCTCAAGGTCAAGAACTGGGAGACTGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CTGCTGTATGCATATCTCTGTGAACTGCACATTGGCTaGGTCCCCCAGGGTGGAGCCGTCAGGCTGCTTGTA +
Preference number: 6 (lower is better)
Translates to: LLYAYLCELHIG*VPQGGAVRLLV
Trigger: TACAAGCAGCCTGACGGCTCCACCCTGGGGGACCCAGCCAATGTGCAGTTCACAGAGATATGCATACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CCTGCAGGGTCTCTTCCCTGTAGATATGATCTATCTTaGATTGCCGGCACCCGAAGACCAGGACCATGGGGC +
Preference number: 6 (lower is better)
Translates to: PAGSLPCRYDLS*IAGTRRPGPWG
Trigger: GCCCCATGGTCCTGGTCTTCGGGTGCCGGCAATCCAAGATAGATCATATCTACAGGGAAGAGACCCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp CAGGGTCTCTTCCCTGTAGATATGATCTATCTTGGATaGCCGGCACCCGAAGACCAGGACCATGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QGLFPVDMIYLG*PAPEDQDHGAG
Trigger: CCCTGCCCCATGGTCCTGGTCTTCGGGTGCCGGCAATCCAAGATAGATCATATCTACAGGGAAGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp GAAAGGTTCAGCAGTGTCTGTCCGCGCTTACAAAACTaGCAGCCGGCTGGGCAAGAGGGTCCAGTTAGGAGC +
Preference number: 6 (lower is better)
Translates to: ERFSSVCPRLQN*QPAGQEGPVRS
Trigger: GCTCCTAACTGGACCCTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGGACAGACACTGCTGAACCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CAA 90 bp TCCAAATCTCTGTCCACCTGGATTCCCATATCTTTCATCTCTGCCTaGGCAGGTGCCCCTCCCTTGACCCCTCTGCTCCCACTGGTGAGA +
Preference number: 6 (lower is better)
Translates to: SKSLSTWIPISFISA*AGAPPLTPLLPLVR
Trigger: TCTCACCAGTGGGAGCAGAGGGGTCAAGGGAGGGGCACCTGCCAAGGCAGAGATGAAAGATATGGGAATCCAGGTGGACAGAGATTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CGTCTTCAGGCCTCCTTGCATGCTGAGAAGGATGCATaGTGGAGCCCATGCAGATGTACTCAGTGCATCCCG +
Preference number: 6 (lower is better)
Translates to: RLQASLHAEKDA*WSPCRCTQCIP
Trigger: CGGGATGCACTGAGTACATCTGCATGGGCTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CATTGGCCAGGGGTCCAGCACTCTCAAAGTTGTCTCTaGGGTCGGGCCCATCGCCTGATGATTTTTGGGAGT +
Preference number: 6 (lower is better)
Translates to: HWPGVQHSQSCL*GRAHRLMIFGS
Trigger: ACTCCCAAAAATCATCAGGCGATGGGCCCGACCTCAGAGACAACTTTGAGAGTGCTGGACCCCTGGCCAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp CGTTCTCCACGCCGAGGGGCAGAGGTTTGTGTGACTTaGCGTCCAAATCTCTGTCCACCTGGATTCCCATAT +
Preference number: 6 (lower is better)
Translates to: RSPRRGAEVCVT*RPNLCPPGFPY
Trigger: ATATGGGAATCCAGGTGGACAGAGATTTGGACGGCAAGTCACACAAACCTCTGCCCCTCGGCGTGGAGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp GAGCTGTCCTTTTGTGCGGACGTCTTCAGGCCTCCTTaGATGCTGAGAAGGATGCATGATGGAGCCCATGCA +
Preference number: 6 (lower is better)
Translates to: ELSFCADVFRPP*MLRRMHDGAHA
Trigger: TGCATGGGCTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACGTCCGCACAAAAGGACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp TTCAGGGCTCGGTACACAGACTCCGCCAGCTGCTCCTaGAGGATGTCCTGCACGTACTTCTTTGGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: FRARYTDSASCS*RMSCTYFFGLS
Trigger: AGACAAACCAAAGAAGTACGTGCAGGACATCCTGCAGGAGCAGCTGGCGGAGTCTGTGTACCGAGCCCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp AAAGGTTCAGCAGTGTCTGTCCGCGCTTACAAAACTTaGAGCCGGCTGGGCAAGAGGGTCCAGTTAGGAGCT +
Preference number: 6 (lower is better)
Translates to: KGSAVSVRAYKT*SRLGKRVQLGA
Trigger: AGCTCCTAACTGGACCCTCTTGCCCAGCCGGCTGCAAGTTTTGTAAGCGCGGACAGACACTGCTGAACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 72 bp TCACTGAAACGAATTAGCAGTGACGTCCAACCCGACTaGTTTATGGGTGTGGGGAGGGAGACGTCGCAACCC +
Preference number: 6 (lower is better)
Translates to: SLKRISSDVQPD*FMGVGRETSQP
Trigger: GGGTTGCGACGTCTCCCTCCCCACACCCATAAACCAGTCGGGTTGGACGTCACTGCTAATTCGTTTCAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618760.4
CDS CAA 72 bp TCGTTCTCCACGCCGAGGGGCAGAGGTTTGTGTGACTaGCCGTCCAAATCTCTGTCCACCTGGATTCCCATA +
Preference number: 6 (lower is better)
Translates to: SFSTPRGRGLCD*PSKSLSTWIPI
Trigger: TATGGGAATCCAGGTGGACAGAGATTTGGACGGCAAGTCACACAAACCTCTGCCCCTCGGCGTGGAGAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp TCAGTGAGAACCACCTCAGTCTCCCAGTTCTTGACCTaGAGGAAGCGTGGACACTTGGAGGGGCTGCCATTC +
Preference number: 6 (lower is better)
Translates to: SVRTTSVSQFLT*RKRGHLEGLPF
Trigger: GAATGGCAGCCCCTCCAAGTGTCCACGCTTCCTCAAGGTCAAGAACTGGGAGACTGAGGTGGTTCTCACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp GCTTTCACCCTCTTGGCCATAGCCTGCCCCATCAGCTaGGCCGAGAACTTGACAGCTTCTGCTAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: AFTLLAIACPIS*AENLTASASFL
Trigger: CAAGAAGCTAGCAGAAGCTGTCAAGTTCTCGGCCAAGCTGATGGGGCAGGCTATGGCCAAGAGGGTGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp AGGTCATTGAAGACTCGGTCGTTCTCCACGCCGAGGGGCAGAGGTTaGTGTGACTTGCCGTCCAAATCTCTGTCCACCTGGATTCCCATA +
Preference number: 6 (lower is better)
Translates to: RSLKTRSFSTPRGRG*CDLPSKSLSTWIPI
Trigger: TATGGGAATCCAGGTGGACAGAGATTTGGACGGCAAGTCACACAAACCTCTGCCCCTCGGCGTGGAGAACGACCGAGTCTTCAATGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp GGCTGCTCCTTCTCTGAATATGGGTTGTTGAGGACGACAGGCACATaGCCCTTCCCCCATAGGTCATTGAAGACTCGGTCGTTCTCCACG +
Preference number: 6 (lower is better)
Translates to: GCSFSEYGLLRTTGT*PFPHRSLKTRSFST
Trigger: CGTGGAGAACGACCGAGTCTTCAATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCCTCAACAACCCATATTCAGAGAAGGAGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp AGGATGGTCGCTTTCACCCTCTTGGCCATAGCCTGCCCCATCAGCTaGGCCGAGAACTTGACAGCTTCTGCTAGCTTCTTGAAGCCAATG +
Preference number: 6 (lower is better)
Translates to: RMVAFTLLAIACPIS*AENLTASASFLKPM
Trigger: CATTGGCTTCAAGAAGCTAGCAGAAGCTGTCAAGTTCTCGGCCAAGCTGATGGGGCAGGCTATGGCCAAGAGGGTGAAAGCGACCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CCTTTTGTGCGGACGTCTTCAGGCCTCCTTGCATGCTaGGAAGGATGCATGATGGAGCCCATGCAGATGTAC +
Preference number: 6 (lower is better)
Translates to: PFVRTSSGLLAC*EGCMMEPMQMY
Trigger: GTACATCTGCATGGGCTCCATCATGCATCCTTCTCAGCATGCAAGGAGGCCTGAAGACGTCCGCACAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp CTTTGTCACTCTGGAAGCTATAGAGAACCGCGATATTaGTCTCCACCAGCGCCTGGTCCTTCCACAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LCHSGSYREPRY*SPPAPGPSTGR
Trigger: CCTCCCTGTGGAAGGACCAGGCGCTGGTGGAGATCAATATCGCGGTTCTCTATAGCTTCCAGAGTGACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp ATAGTTGACCGACTGGATTTAGGGCTCTGGAGGTTTTaGCGGCTAAGGAGCCGGGCAGCTGAGACTCGCTTT +
Preference number: 6 (lower is better)
Translates to: IVDRLDLGLWRF*RLRSRAAETRF
Trigger: AAAGCGAGTCTCAGCTGCCCGGCTCCTTAGCCGTCAAAACCTCCAGAGCCCTAAATCCAGTCGGTCAACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp AGGACATCGAAGCGGCCTCTAGGCGGTTTCCAGCCCTaGTGTATGCATATCTCTGTGAACTGCACATTGGCT +
Preference number: 6 (lower is better)
Translates to: RTSKRPLGGFQP*CMHISVNCTLA
Trigger: AGCCAATGTGCAGTTCACAGAGATATGCATACAGCAGGGCTGGAAACCGCCTAGAGGCCGCTTCGATGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CGGCTAAGGAGCCGGGCAGCTGAGACTCGCTTTTTGTaGACATTGGATAGACCTTGTGTGAGTTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RLRSRAAETRFL*TLDRPCVSSGA
Trigger: AGCTCCAGAACTCACACAAGGTCTATCCAATGTCCACAAAAAGCGAGTCTCAGCTGCCCGGCTCCTTAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp ACCCGCTCCTTCACCAGAAATCCCAGGCCCCCAACTTaGCGCTTGAAGAGACGAACAGAAATGACATTGGGC +
Preference number: 6 (lower is better)
Translates to: TRSFTRNPRPPT*RLKRRTEMTLG
Trigger: GCCCAATGTCATTTCTGTTCGTCTCTTCAAGCGCAAAGTTGGGGGCCTGGGATTTCTGGTGAAGGAGCGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp TATCTCCTTGAGCAGTTCATTGTTCTCCCCTCTGCCTaGGAGGCTGACTCTGGTTGCTTTCTTCGCGGGGTC +
Preference number: 6 (lower is better)
Translates to: YLLEQFIVLPSA*EADSGCFLRGV
Trigger: GACCCCGCGAAGAAAGCAACCAGAGTCAGCCTCCAAGGCAGAGGGGAGAACAATGAACTGCTCAAGGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp CAGCCGAATTTCTCCCCATTCTCAGGGGGATCTCCATaGCCAAAGGTGCTGGTGACCACAAGGACCAGAGTT +
Preference number: 6 (lower is better)
Translates to: QPNFSPFSGGSP*PKVLVTTRTRV
Trigger: AACTCTGGTCCTTGTGGTCACCAGCACCTTTGGCAATGGAGATCCCCCTGAGAATGGGGAGAAATTCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp AACCTCACATTGGCCAGGGGTCCAGCACTCTCAAAGTaGTCTCTGAGGTCGGGCCCATCGCCTGATGATTTT +
Preference number: 6 (lower is better)
Translates to: NLTLARGPALSK*SLRSGPSPDDF
Trigger: AAAATCATCAGGCGATGGGCCCGACCTCAGAGACAACTTTGAGAGTGCTGGACCCCTGGCCAATGTGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp GGCTTACTGACCCGCTCCTTCACCAGAAATCCCAGGCCCCCAACTTaGCGCTTGAAGAGACGAACAGAAATGACATTGGGCTGGATTTGC +
Preference number: 6 (lower is better)
Translates to: GLLTRSFTRNPRPPT*RLKRRTEMTLGWIC
Trigger: GCAAATCCAGCCCAATGTCATTTCTGTTCGTCTCTTCAAGCGCAAAGTTGGGGGCCTGGGATTTCTGGTGAAGGAGCGGGTCAGTAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp ACACCCTACCTCGACACTGCGGGACACATCCCCACCTaGGTCAGCTTTACTGAACAGAGCTCTGCAAATAAC +
Preference number: 6 (lower is better)
Translates to: TPYLDTAGHIPT*VSFTEQSSANN
Trigger: GTTATTTGCAGAGCTCTGTTCAGTAAAGCTGACTCAGGTGGGGATGTGTCCCGCAGTGTCGAGGTAGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS GCA 72 bp CTAGCTTCCGAGGGGTCCTGTCTGAAGACCTCACAATaGTATCAGGCCAAGATGATTTCACCAGGAGGATCC +
Preference number: 6 (lower is better)
Translates to: LASEGSCLKTSQ*YQAKMISPGGS
Trigger: GGATCCTCCTGGTGAAATCATCTTGGCCTGATAGCATTGTGAGGTCTTCAGACAGGACCCCTCGGAAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CCA 72 bp TACTCAGTGCATCCCGTTTCCAATGTGCTCTTAAGGTaGAGGGTGTCAGTGAGAACCACCTCAGTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: YSVHPVSNVLLR*RVSVRTTSVSQ
Trigger: CTGGGAGACTGAGGTGGTTCTCACTGACACCCTCCACCTTAAGAGCACATTGGAAACGGGATGCACTGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp CTATCTTGGATTGCCGGCACCCGAAGACCAGGACCATaGGGCAGGGGTTCATTCCTTTGTGTTGGATATCAA +
Preference number: 6 (lower is better)
Translates to: LSWIAGTRRPGP*GRGSFLCVGYQ
Trigger: TTGATATCCAACACAAAGGAATGAACCCCTGCCCCATGGTCCTGGTCTTCGGGTGCCGGCAATCCAAGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 72 bp AGTTCTGGAGCTTCGGCCACAAAGGTGAGGCGGAACTaGTTTCTCTTCCAGCTGCGATCATTGCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: SSGASATKVRRN*FLFQLRSLLMR
Trigger: CCTCATCAGCAATGATCGCAGCTGGAAGAGAAACAAGTTCCGCCTCACCTTTGTGGCCGAAGCTCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp CCTTGTGTGAGTTCTGGAGCTTCGGCCACAAAGGTGAGGCGGAACTaGTTTCTCTTCCAGCTGCGATCATTGCTGATGAGGGAATTGTTG +
Preference number: 6 (lower is better)
Translates to: PCVSSGASATKVRRN*FLFQLRSLLMRELL
Trigger: CAACAATTCCCTCATCAGCAATGATCGCAGCTGGAAGAGAAACAAGTTCCGCCTCACCTTTGTGGCCGAAGCTCCAGAACTCACACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp AAGAAACGCAAGGGTTCCGGGTACTTCCTTTCTTCCTGCACAGAGTaGGGGTGCCTCATTTCCATCAAAGCACAGCCGAATTTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: KKRKGSGYFLSSCTE*GCLISIKAQPNFSP
Trigger: TGGGGAGAAATTCGGCTGTGCTTTGATGGAAATGAGGCACCCCAACTCTGTGCAGGAAGAAAGGAAGTACCCGGAACCCTTGCGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS TCA 72 bp TCCCTAAGGTCAGGCAGAAAGGGGAGGAGATGCGTCTaGTGGCTGTGTCTAGAAGTGACGCATGATAGATGT +
Preference number: 6 (lower is better)
Translates to: SLRSGRKGRRCV*WLCLEVTHDRC
Trigger: ACATCTATCATGCGTCACTTCTAGACACAGCCATCAGACGCATCTCCTCCCCTTTCTGCCTGACCTTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS GCA 72 bp GGGCAGGGGTTCATTCCTTTGTGTTGGATATCAAATTaGCGCTGTTGCCAGAAGCTTCGGAAAGGGGCAATG +
Preference number: 6 (lower is better)
Translates to: GQGFIPLCWISN*RCCQKLRKGAM
Trigger: CATTGCCCCTTTCCGAAGCTTCTGGCAACAGCGGCAATTTGATATCCAACACAAAGGAATGAACCCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp TCCGGGTACTTCCTTTCTTCCTGCACAGAGTTGGGGTaGCTCATTTCCATCAAAGCACAGCCGAATTTCTCC +
Preference number: 6 (lower is better)
Translates to: SGYFLSSCTELG*LISIKAQPNFS
Trigger: GGAGAAATTCGGCTGTGCTTTGATGGAAATGAGGCACCCCAACTCTGTGCAGGAAGAAAGGAAGTACCCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS CAA 72 bp TTCTCTGAATATGGGTTGTTGAGGACGACAGGCACATaGCCCTTCCCCCATAGGTCATTGAAGACTCGGTCG +
Preference number: 6 (lower is better)
Translates to: FSEYGLLRTTGT*PFPHRSLKTRS
Trigger: CGACCGAGTCTTCAATGACCTATGGGGGAAGGGCAATGTGCCTGTCGTCCTCAACAACCCATATTCAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp GGGATTCAAATCCTGATTCTGTCATTTACTGACACGTaGCTCGGTCAAGGGCTTCAGCATCTTGGTGCCTCC +
Preference number: 6 (lower is better)
Translates to: GIQILILSFTDT*LGQGLQHLGAS
Trigger: GGAGGCACCAAGATGCTGAAGCCCTTGACCGAGTCACGTGTCAGTAAATGACAGAATCAGGATTTGAATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS TCA 72 bp ATCTTCATTGCCAGCCTGTTAGATGCGGATCAGATCTaGGGCATCATGAGCAGGACAGATGAGGCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: IFIASLLDADQI*GIMSRTDEASS
Trigger: AGAACTGGCCTCATCTGTCCTGCTCATGATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCAATGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS GCA 72 bp AAGAAACGCAAGGGTTCCGGGTACTTCCTTTCTTCCTaGACAGAGTTGGGGTGCCTCATTTCCATCAAAGCA +
Preference number: 6 (lower is better)
Translates to: KKRKGSGYFLSS*TELGCLISIKA
Trigger: TGCTTTGATGGAAATGAGGCACCCCAACTCTGTGCAGGAAGAAAGGAAGTACCCGGAACCCTTGCGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338101.8
ENST00000618760.4
CDS CAA 72 bp TCCTTCACCAGAAATCCCAGGCCCCCAACTTTGCGCTaGAAGAGACGAACAGAAATGACATTGGGCTGGATT +
Preference number: 6 (lower is better)
Translates to: SFTRNPRPPTLR*KRRTEMTLGWI
Trigger: AATCCAGCCCAATGTCATTTCTGTTCGTCTCTTCAAGCGCAAAGTTGGGGGCCTGGGATTTCTGGTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp TTCTCCATGTGCTTAATGAAGGACTCGGTGGCGGAGTaGTGGTCAACAATGGTCACTTTGTCACTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: FSMCLMKDSVAE*WSTMVTLSLWK
Trigger: CTTCCAGAGTGACAAAGTGACCATTGTTGACCATCACTCCGCCACCGAGTCCTTCATTAAGCACATGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp AGAAGAGAACGGTGTCACCTTCAACAGTCTATAAGCTaGTGTCGCAGAGGTTGGAAGGAAGGGTTAAAGGGG +
Preference number: 6 (lower is better)
Translates to: RRERCHLQQSIS*CRRGWKEGLKG
Trigger: CCCCTTTAACCCTTCCTTCCAACCTCTGCGACATCAGCTTATAGACTGTTGAAGGTGACACCGTTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS CCA 72 bp TCGTACGTTCGCAGGGTGACTCCAAAAATATCCTCATaGTATCGGTTGTCATCCCTCATCCGGCTGATGAAT +
Preference number: 6 (lower is better)
Translates to: SYVRRVTPKISS*YRLSSLIRLMN
Trigger: ATTCATCAGCCGGATGAGGGATGACAACCGATACCATGAGGATATTTTTGGAGTCACCCTGCGAACGTACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CCA 72 bp AAATCCAAGGTACTTAGAAGCCCATCATGCTGTGTGTaGCCCCAAGAGGGCTATGAGTTTTGGGTTCTGAAC +
Preference number: 6 (lower is better)
Translates to: KSKVLRSPSCCV*PQEGYEFWVLN
Trigger: GTTCAGAACCCAAAACTCATAGCCCTCTTGGGGCCACACACAGCATGATGGGCTTCTAAGTACCTTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS CAA 72 bp TCTTCAATGAAGGCAATGGACTCAGATCTAAGGCGGTaGGTCACTTCGTACGTTCGCAGGGTGACTCCAAAA +
Preference number: 6 (lower is better)
Translates to: SSMKAMDSDLRR*VTSYVRRVTPK
Trigger: TTTTGGAGTCACCCTGCGAACGTACGAAGTGACCAACCGCCTTAGATCTGAGTCCATTGCCTTCATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp AGAACGGTGTCACCTTCAACAGTCTATAAGCTGATGTCGCAGAGGTaGGAAGGAAGGGTTAAAGGGGAATGTCATGGTTCAGGATCACAG +
Preference number: 6 (lower is better)
Translates to: RTVSPSTVYKLMSQR*EGRVKGECHGSGSQ
Trigger: CTGTGATCCTGAACCATGACATTCCCCTTTAACCCTTCCTTCCAACCTCTGCGACATCAGCTTATAGACTGTTGAAGGTGACACCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS CAA 90 bp GCCACAAAGGTGAGGCGGAACTTGTTTCTCTTCCAGCTGCGATCATaGCTGATGAGGGAATTGTTGGCCTTTTCAATGTTGACATCATCT +
Preference number: 6 (lower is better)
Translates to: ATKVRRNLFLFQLRS*LMRELLAFSMLTSS
Trigger: AGATGATGTCAACATTGAAAAGGCCAACAATTCCCTCATCAGCAATGATCGCAGCTGGAAGAGAAACAAGTTCCGCCTCACCTTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS GCA 72 bp CAGATCACATGCTCAGTGTGGAGAGCTGTAGTTGTGTaGACATCCGTGTATATTTCTGCATTCACACGACGA +
Preference number: 6 (lower is better)
Translates to: QITCSVWRAVVV*TSVYISAFTRR
Trigger: TCGTCGTGTGAATGCAGAAATATACACGGATGTGCACACAACTACAGCTCTCCACACTGAGCATGTGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS CAA 72 bp GTGAGGCGGAACTTGTTTCTCTTCCAGCTGCGATCATaGCTGATGAGGGAATTGTTGGCCTTTTCAATGTTG +
Preference number: 6 (lower is better)
Translates to: VRRNLFLFQLRS*LMRELLAFSML
Trigger: CAACATTGAAAAGGCCAACAATTCCCTCATCAGCAATGATCGCAGCTGGAAGAGAAACAAGTTCCGCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp CGGAACTTGTTTCTCTTCCAGCTGCGATCATTGCTGATGAGGGAATaGTTGGCCTTTTCAATGTTGACATCATCTCCCACACAGAAGACA +
Preference number: 6 (lower is better)
Translates to: RNLFLFQLRSLLMRE*LAFSMLTSSPTQKT
Trigger: TGTCTTCTGTGTGGGAGATGATGTCAACATTGAAAAGGCCAACAATTCCCTCATCAGCAATGATCGCAGCTGGAAGAGAAACAAGTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS CAA 90 bp TTTTTGCTCTCTTCAATGAAGGCAATGGACTCAGATCTAAGGCGGTaGGTCACTTCGTACGTTCGCAGGGTGACTCCAAAAATATCCTCA +
Preference number: 6 (lower is better)
Translates to: FLLSSMKAMDSDLRR*VTSYVRRVTPKISS
Trigger: TGAGGATATTTTTGGAGTCACCCTGCGAACGTACGAAGTGACCAACCGCCTTAGATCTGAGTCCATTGCCTTCATTGAAGAGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp TTTCTCCATCTTCAGTTATTCTGCTGTCGAATGAGTTaGATAGTCCCAGCCTCACTGGTTTTCCAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: FLHLQLFCCRMS*IVPASLVFQVR
Trigger: CCTGACCTGGAAAACCAGTGAGGCTGGGACTATTCAACTCATTCGACAGCAGAATAACTGAAGATGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS GCA 72 bp GAGAGCTGTAGTTGTGTGCACATCCGTGTATATTTCTaGATTCACACGACGAATTCACGGACGAATTTCTGC +
Preference number: 6 (lower is better)
Translates to: ESCSCVHIRVYF*IHTTNSRTNFC
Trigger: GCAGAAATTCGTCCGTGAATTCGTCGTGTGAATGCAGAAATATACACGGATGTGCACACAACTACAGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS CAA 72 bp TCACCTTCAACAGTCTATAAGCTGATGTCGCAGAGGTaGGAAGGAAGGGTTAAAGGGGAATGTCATGGTTCA +
Preference number: 6 (lower is better)
Translates to: SPSTVYKLMSQR*EGRVKGECHGS
Trigger: TGAACCATGACATTCCCCTTTAACCCTTCCTTCCAACCTCTGCGACATCAGCTTATAGACTGTTGAAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477584.1
CDS CAA 72 bp GTTTCTCCATCTTCAGTTATTCTGCTGTCGAATGAGTaGAATAGTCCCAGCCTCACTGGTTTTCCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: VSPSSVILLSNE*NSPSLTGFPGQ
Trigger: CTGACCTGGAAAACCAGTGAGGCTGGGACTATTCAACTCATTCGACAGCAGAATAACTGAAGATGGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549189.1
CDS GCA 72 bp CATGATAGATGTGAACTATTCTCTGGGTATCTTCATTaGCAGCCTGTTAGATGCGGATCAGATCTGAGGCAT +
Preference number: 6 (lower is better)
Translates to: HDRCELFSGYLH*QPVRCGSDLRH
Trigger: ATGCCTCAGATCTGATCCGCATCTAACAGGCTGGCAATGAAGATACCCAGAGAATAGTTCACATCTATCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317775.11
ENST00000618760.4
CDS CAA 90 bp AACTTGTTTCTCTTCCAGCTGCGATCATTGCTGATGAGGGAATTGTaGGCCTTTTCAATGTTGACATCATCTCCCACACAGAAGACATCA +
Preference number: 6 (lower is better)
Translates to: NLFLFQLRSLLMREL*AFSMLTSSPTQKTS
Trigger: TGATGTCTTCTGTGTGGGAGATGATGTCAACATTGAAAAGGCCAACAATTCCCTCATCAGCAATGATCGCAGCTGGAAGAGAAACAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317775.11
ENST00000338101.8
ENST00000344089.4
ENST00000618760.4
CDS TCA 72 bp TTATTTCTTAATGTCCCTCCTTTATCCTATCATCACTaGAACGAATTAGCAGTGACGTCCAACCCGACTGGT +
Preference number: 6 (lower is better)
Translates to: LFLNVPPLSYHH*NELAVTSNPTG
Trigger: ACCAGTCGGGTTGGACGTCACTGCTAATTCGTTTCAGTGATGATAGGATAAAGGAGGGACATTAAGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618760.4