RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOP9 (Homo sapiens)

Ensembl gene IDs: ENSG00000196943, ENSG00000285326

Ensembl transcript IDs: ENST00000267425.8, ENST00000396802.7, ENST00000557362.1, ENST00000642262.1, ENST00000644840.2, ENST00000646863.1, ENST00000649034.1, ENST00000650565.1

Found 1005 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCTGGACCTCAGCTCCACCACCCCAGCGACCTTTCCGTGTCTGTaGTCACAAGCGGACCATCCGGAAAGGCCTGACAGCTGCCACCCG +
Preference number: 1 (lower is better)
Translates to: GLDLSSTTPATFPCL*SQADHPERPDSCHP
Trigger: CGGGTGGCAGCTGTCAGGCCTTTCCGGATGGTCCGCTTGTGATCACAGACACGGAAAGGTCGCTGGGGTGGTGGAGCTGAGGTCCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp AGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGCCGCTTTAGGAAGGTAGTCAAGGCC +
Preference number: 1 (lower is better)
Translates to: SMEFNARLRLATAPC*CSQASRRFRKVVKA
Trigger: GGCCTTGACTACCTTCCTAAAGCGGCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR GCA 90 bp CCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATaGCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCAAGC +
Preference number: 1 (lower is better)
Translates to: PSPRSKASVFKYGVQ*PPPLGHRTLLLFPS
Trigger: GCTTGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR CCA 90 bp TGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGCAGCAGAAGGGCCGCCTCCATTCCT +
Preference number: 1 (lower is better)
Translates to: WAICCWEFPPPFVMQ*RGLSSGSRRAASIP
Trigger: AGGAATGGAGGCGGCCCTTCTGCTGCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR GCA 90 bp TCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTaGTGCTGTTCCCAAGCCTCTCGCCGCTTTAGGAAGGTAGTCAAG +
Preference number: 1 (lower is better)
Translates to: SSMEFNARLRLATAP*CCSQASRRFRKVVK
Trigger: CTTGACTACCTTCCTAAAGCGGCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR CCA 90 bp GCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCCTaGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCA +
Preference number: 1 (lower is better)
Translates to: ALTRVSYRVECCHMA*DGRGPSTARTSPDS
Trigger: TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 90 bp CCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATaGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: PINTQSQIQSLSLQV*SSMPASAWPPHPAA
Trigger: AGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR TCA 90 bp AGCAGTGGCAGCAGAAGGGCCGCCTCCATTCCTACTAAGGGGCTCTaGGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGA +
Preference number: 1 (lower is better)
Translates to: SSGSRRAASIPTKGL*ASAPRIIPTDPLQR
Trigger: TCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCTCAGAGCCCCTTAGTAGGAATGGAGGCGGCCCTTCTGCTGCCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp GCAGTGGACAGTGAGGACTTCTTCCAGCTGCTGGAGGATGACACGTaGCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGG +
Preference number: 1 (lower is better)
Translates to: AVDSEDFFQLLEDDT*LMVLQSGQSWSPTR
Trigger: CCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCTCACTGTCCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp TCTTGTCTCTGCCATTCAGGGAGCTCCTTCGTTGGACCTCCACACTaGTGCAAGGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCC +
Preference number: 1 (lower is better)
Translates to: SCLCHSGSSFVGPPH*CKAWAICCWEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAACGAAGGAGCTCCCTGAATGGCAGAGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR GCA 90 bp GGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTATACTGGGGCTaGTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: GQSWSPTRVRGLYWG*FQCLSFRAFPGFLS
Trigger: AGAGAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 90 bp CAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTATACTaGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTC +
Preference number: 1 (lower is better)
Translates to: QSGQSWSPTRVRGLY*GCFQCLSFRAFPGF
Trigger: GAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp ACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTaGCGTGTACAAGCAAAACCCTCGAGACCTCTTTGGCAGCCTGAA +
Preference number: 1 (lower is better)
Translates to: TGEAQAQQGHRPIHL*RVQAKPSRPLWQPE
Trigger: TTCAGGCTGCCAAAGAGGTCTCGAGGGTTTTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp AGAGAAGATGACCTAAGTGTGACTGCAGCAGGCAGCTCTGGAAAATaGAGCCAGAGCAGTGAGCCAGCCCCTCCTCCGACCAAGGAGGAA +
Preference number: 1 (lower is better)
Translates to: REDDLSVTAAGSSGK*SQSSEPAPPPTKEE
Trigger: TTCCTCCTTGGTCGGAGGAGGGGCTGGCTCACTGCTCTGGCTTCATTTTCCAGAGCTGCCTGCTGCAGTCACACTTAGGTCATCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 90 bp GGGAAGGGGCATGGGATAAGACCTGCCCTTCTTGCTTCTTGCCATTaGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCT +
Preference number: 1 (lower is better)
Translates to: GKGHGIRPALLASCH*AGIGDPTAEWSANP
Trigger: AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGCCCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp GGGTCTGACCCAGTGCTGATGGAGATTAGTGGTGGGTGTCTGGTATaGGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGC +
Preference number: 1 (lower is better)
Translates to: GSDPVLMEISGGCLV*GSTALTRVSYRVEC
Trigger: GCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTCATACCAGACACCCACCACTAATCTCCATCAGCACTGGGTCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp CACAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTaGTGGAGATTAGTGGTGGGTGTCTGGTATGAGGATCTACTGCAC +
Preference number: 1 (lower is better)
Translates to: HSGQKVQAREGLTQC*WRLVVGVWYEDLLH
Trigger: GTGCAGTAGATCCTCATACCAGACACCCACCACTAATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp TTCCCGGGCTTCCTCTCTAGCTTAACCCTGATCCTGGGGACCAGGTaGAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACA +
Preference number: 1 (lower is better)
Translates to: FPGFLSSLTLILGTR*RRSCGIVKDVTQWT
Trigger: TGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGCACCTGGTCCCCAGGATCAGGGTTAAGCTAGAGAGGAAGCCCGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 90 bp TCATCTGATTTCCTCTTGTCTCTGCCATTCAGGGAGCTCCTTCGTTaGACCTCCACACTGCTGCAAGGCCTGGGCCATATGTTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: SSDFLLSLPFRELLR*TSTLLQGLGHMLLG
Trigger: TCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAACGAAGGAGCTCCCTGAATGGCAGAGACAAGAGGAAATCAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR CCA 90 bp CTTGCTTCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATaGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTGGA +
Preference number: 1 (lower is better)
Translates to: LASCHWAGIGDPTAE*SANPGARGGWNCSG
Trigger: TCCACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 90 bp ACCAGGTCAGTATCTAATATAAGCTCGGAGTTTGGACGGAGGGTCTaGACCTCAGCTCCACCACCCCAGCGACCTTTCCGTGTCTGTGAT +
Preference number: 1 (lower is better)
Translates to: TRSVSNISSEFGRRV*TSAPPPQRPFRVCD
Trigger: ATCACAGACACGGAAAGGTCGCTGGGGTGGTGGAGCTGAGGTCCAGACCCTCCGTCCAAACTCCGAGCTTATATTAGATACTGACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp GAAAGGCCAAGATCAAGATGTCCCCCAGGCATCTTGATCCCAGCCTaGCTGCTGCTACATCTAATCCCCTACCAATGCCTCCTGTCCCTA +
Preference number: 1 (lower is better)
Translates to: ERPRSRCPPGILIPA*LLLHLIPYQCLLSL
Trigger: TAGGGACAGGAGGCATTGGTAGGGGATTAGATGTAGCAGCAGTCAGGCTGGGATCAAGATGCCTGGGGGACATCTTGATCTTGGCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp CCCCATAATTCGTCCTCTTGCACCCACCTACCCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATCTCCCAGCTTGATGGCTTCCTCCCA +
Preference number: 1 (lower is better)
Translates to: PHNSSSCTHLPLVSS*LWKVLISQLDGFLP
Trigger: TGGGAGGAAGCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGGTAGGTGGGTGCAAGAGGACGAATTATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp AGACAGTACAGGCTAGATAACCCACCCAATTTCCCCACTGTCCTCTaGTCCCCTCGTGACAGAACCTTTCAGCATAACGCCTCACATCCC +
Preference number: 1 (lower is better)
Translates to: RQYRLDNPPNFPTVL*SPRDRTFQHNASHP
Trigger: GGGATGTGAGGCGTTATGCTGAAAGGTTCTGTCACGAGGGGATCAGAGGACAGTGGGGAAATTGGGTGGGTTATCTAGCCTGTACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp CAACAACCTGAATACCTTTTCAAGGCTCTGGCTTGGGCTCAAGCCTaGAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTAC +
Preference number: 1 (lower is better)
Translates to: QQPEYLFKALAWAQA*RGNATGQVTGQSSY
Trigger: GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAAAGGTATTCAGGTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR CCA 90 bp CCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCCAATaGCTTTTGCCAGGCAATTCTTCCTCCAGGACCCCATCTGGCCCC +
Preference number: 1 (lower is better)
Translates to: PHNTCHHQRHTYKLQ*LLPGNSSSRTPSGP
Trigger: GGGGCCAGATGGGGTCCTGGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp AGGGGCTCTGAGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTaGAAAGACTATGACAGCATCAAATTTCAGGACCTGCAGACAGTA +
Preference number: 1 (lower is better)
Translates to: RGSELLPPESFQPTH*KDYDSIKFQDLQTV
Trigger: TACTGTCTGCAGGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCTCAGAGCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 90 bp ATACCTTTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATaGAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCT +
Preference number: 1 (lower is better)
Translates to: IPFQGSGLGSSLQGK*NWPGHRAIKLLCVS
Trigger: AGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAAAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR GCA 90 bp AACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCTaGAGACAGTACAGGCTAGATAACCCACCCAATTTCCCCACTGTC +
Preference number: 1 (lower is better)
Translates to: NRPTAKTMTASNFRT*RQYRLDNPPNFPTV
Trigger: GACAGTGGGGAAATTGGGTGGGTTATCTAGCCTGTACTGTCTGCAGGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp GAAGTGAGGTGCAGCATTGTAGATAAGACAGAAGGGTGGACTTCGTaGGAACCTGGCTTGCTTTCCAATTCCAAACCAGAAGTGACTTGG +
Preference number: 1 (lower is better)
Translates to: EVRCSIVDKTEGWTS*EPGLLSNSKPEVTW
Trigger: CCAAGTCACTTCTGGTTTGGAATTGGAAAGCAAGCCAGGTTCTCACGAAGTCCACCCTTCTGTCTTATCTACAATGCTGCACCTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 90 bp TACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTaGGTATATCCAAAACAAGGGGGTCAGGGTATGGAGTTTACGAGG +
Preference number: 1 (lower is better)
Translates to: YSVSSQQTVRESCST*VYPKQGGQGMEFTR
Trigger: CCTCGTAAACTCCATACCCTGACCCCCTTGTTTTGGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR GCA 90 bp CTTGGCCCAAAGAAAGTACTCAGGTCAGAAATCAACATGTCATACTaGCCCATCCCCTACAGTTGGATAGTCCCCATAATTCGTCCTCTT +
Preference number: 1 (lower is better)
Translates to: LGPKKVLRSEINMSY*PIPYSWIVPIIRPL
Trigger: AAGAGGACGAATTATGGGGACTATCCAACTGTAGGGGATGGGGCAGTATGACATGTTGATTTCTGACCTGAGTACTTTCTTTGGGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 90 bp CCTGAATGTCAAAGCCACATTCTACGGGCTCTACTCTATGAGTTGTaGCTTTCAAGGACTTGGCCCAAAGAAAGTACTCAGGTCAGAAAT +
Preference number: 1 (lower is better)
Translates to: PECQSHILRALLYEL*LSRTWPKESTQVRN
Trigger: ATTTCTGACCTGAGTACTTTCTTTGGGCCAAGTCCTTGAAAGTCACAACTCATAGAGTAGAGCCCGTAGAATGTGGCTTTGACATTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 2 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCAGGACTTCTTCCAGCTaGTGGAGGATGACACGTGCC +
Preference number: 2 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALRTSSS*WRMTRA
Trigger: GGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCT...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGGAGGGGGCTGAGCAGTaGCAGCAGAAGGGCCGCCTC +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQEGAEQ*QQKGRL
Trigger: GAGGCGGCCCTTCTGCTGCCACTGCTCAGCCCCCTC...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAGGTCTGACCCAGTGCTaGTGGAGATTAGTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPGLTQC*WRLVVG
Trigger: ACCCACCACTAATCTCCATCAGCACTGGGTCAGACC...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCATTCCAAACCAGAAGTaGCTTGGAGGGGAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALIPNQK*LGGEQG
Trigger: CCCTTGCTCCCCTCCAAGTCACTTCTGGTTTGGAAT...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCATCCTACAGAGTGGAGTaGTGTCATATGGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPSYRVE*CHMAWD
Trigger: GTCCCAGGCCATATGACAGCACTCCACTCTGTAGGA...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 2 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRATAPC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGC...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGTTTGGACGGAGGGTCTaGACCTCAGCTCCACCACCC +
Preference number: 2 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQFGRRV*TSAPPP
Trigger: GGGTGGTGGAGCTGAGGTCCAGACCCTCCGTCCAAA...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCACCTCTTTGGCAGCCTaGATGTCAAAGCCACATTCT +
Preference number: 2 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALTSLAA*MSKPHS
Trigger: AGAATGTGGCTTTGACATTCAGGCTGCCAAAGAGGT...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCTTCCAACCGACCCACTaGAAAGACTATGACAGCATC +
Preference number: 2 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALFQPTH*KDYDSI
Trigger: GATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAA...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGGTTGGACCTCCACACTaGTGCAAGGCCTGGGCCATA +
Preference number: 2 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQVGPPH*CKAWAI
Trigger: TATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAAC...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: AQACRGNATGQVTGQSSYPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTTGCTGTCATATGGCCTaGGACGGGAGAGGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPCCHMA*DGRGPS
Trigger: GCTTGGGCCTCTCCCGTCCCAGGCCATATGACAGCA...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTCATCTCCCAGCTTaGTGGCTTCCTCCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSPHLPA*WLPPKF
Trigger: AAACTTGGGAGGAAGCCATCAAGCTGGGAGATGAGG...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCACTACTCTATGAGTTGTaGCTTTCAAGGACTTGGCCC +
Preference number: 2 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPLLYEL*LSRTWP
Trigger: GGGCCAAGTCCTTGAAAGTCACAACTCATAGAGTAG...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGGATGGTGTTGCAGTCTaGTCAGAGCTGGAGCCCTAC +
Preference number: 2 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQDGVAV*SELEPY
Trigger: GTAGGGCTCCAGCTCTGACCAGACTGCAACACCATC...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 90 bp GAGGACTTCTTCCAGCTGCTGGAGGATGACACGTGCCTGATGGTGTaGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTA +
Preference number: 2 (lower is better)
Translates to: EDFFQLLEDDTCLMV*QSGQSWSPTRVRGL
Trigger: TAGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTGGGGCTCTGAGCTTCTaGCCCCAGAATCATTCCAAC +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGGALSF*PQNHSN
Trigger: GTTGGAATGATTCTGGGGGCAGAAGCTCAGAGCCCC...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR GCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCGGACCTCCACACTGCTaGAAGGCCTGGGCCATATGT +
Preference number: 2 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLGPPHC*KAWAIC
Trigger: ACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCTCCCCACTCCACAGTaGGCTTGTCAAGCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: AQACRGNATGQVTGQSSYLPTPQ*ACQAPE
Trigger: CTCAGGAGCTTGACAAGCCCACTGTGGAGTGGGGAG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAGTCTATACCCTTACCTaGAGAATGCTGTTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPVYTLT*RMLFFP
Trigger: AGGAAAGAACAGCATTCTTCAGGTAAGGGTATAGAC...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCCTCATCTCCCAGCTTaGTGGCTTCCTCCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGPHLPA*WLPPKF
Trigger: AAACTTGGGAGGAAGCCATCAAGCTGGGAGATGAGG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR TCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCACTACTCTATGAGTTGTaGCTTTCAAGGACTTGGCCC +
Preference number: 2 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSLLYEL*LSRTWP
Trigger: GGGCCAAGTCCTTGAAAGTCACAACTCATAGAGTAG...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTGAGGATCTACTGCACTaGCAAGGGTGTCCTACAGAG +
Preference number: 2 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPEDLLH*QGCPTE
Trigger: CTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTC...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTCTGGCCTCCCACTTaGCCTGAAAGGCCAAGATCA +
Preference number: 2 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKFWPPT*PERPRS
Trigger: TGATCTTGGCCTTTCAGGGCAAGTGGGAGGCCAGAA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 2 (lower is better)
Translates to: AQACRGNATGQVTGQSSYAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATC +
Preference number: 2 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSPLVSS*LWKVLI
Trigger: GATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGG...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCTGGAGGATGACACGTaGCTGATGGTGTTGCAGTCT +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGLEDDT*LMVLQS
Trigger: AGACTGCAACACCATCAGGCACGTGTCATCCTCCAG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 2 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 2 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAGTTAGCTCTTGCTTGTaGAAAGTCCTCATCTCCCAG +
Preference number: 2 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSVSSCL*KVLISQ
Trigger: CTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAAC...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTGGGTGTCCTACAGAGTaGAGTGCTGTCATATGGCCT +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGGCPTE*SAVIWP
Trigger: AGGCCATATGACAGCACTCCACTCTGTAGGACACCC...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGGGGGCTCCACAACAGTaGCAACTTGTGATGATGGAG +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQGAPQQ*QLVMME
Trigger: CTCCATCATCACAAGTTGCCACTGTTGTGGAGCCCC...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCCATCCGGAAAGGCCTaGCAGCTGCCACCCGCCAGG +
Preference number: 2 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKPSGKA*QLPPAR
Trigger: CCTGGCGGGTGGCAGCTGTCAGGCCTTTCCGGATGG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTTGGGGCTGCTTCCAATaGCTGTCCTTTAGAGCTTTC +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGWGCFQ*LSFRAF
Trigger: GAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCA...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 2 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTTGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCCCTCGAGACCTCTTTaGCAGCCTGAATGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: AQACRGNATGQVTGQSSYPSRPL*QPECQS
Trigger: GCTTTGACATTCAGGCTGCCAAAGAGGTCTCGAGGG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAGGATGGAACTGCAGTaGACAGTGAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGRMELQ*TVRTSS
Trigger: GGAAGAAGTCCTCACTGTCCACTGCAGTTCCATCCT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGTCATTTTCCACCGAGTaGGCTTTTCTATGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQSFSTE*AFLWEQ
Trigger: CTGCTCCCATAGAAAAGCTCACTCGGTGGAAAATGA...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCTAATCCCCTACCAATaGCTCCTGTCCCTAAACTCC +
Preference number: 2 (lower is better)
Translates to: AQACRGNATGQVTGQSSYLIPYQ*LLSLNS
Trigger: GGAGTTTAGGGACAGGAGGCATTGGTAGGGGATTAG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGTTGGACCTCCACACTaGTGCAAGGCCTGGGCCATA +
Preference number: 2 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVVGPPH*CKAWAI
Trigger: TATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAAC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTATTTCCTCTTGTCTCTaGCATTCAGGGAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGISSCL*HSGSSF
Trigger: GAAGGAGCTCCCTGAATGGCAGAGACAAGAGGAAAT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR GCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGACTCTACCCTCATCATaGCCTTTACACTCACCAAGC +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQTLPSS*PLHSPS
Trigger: GCTTGGTGAGTGTAAAGGGCATGATGAGGGTAGAGT...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACACTTCCCCACACTCTaGCCCGGGTTCCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSHFPTL*PGFPFP
Trigger: AGGAAAAGGGAACCCGGGGCAGAGTGTGGGGAAGTG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGTTAGTGGTGGGTGTCTaGTATGAGGATCTACTGCAC +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQLVVGV*YEDLLH
Trigger: GTGCAGTAGATCCTCATACCAGACACCCACCACTAA...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCGTAAGAGGCCTATACTaGGGCTGCTTCCAATGCCTG +
Preference number: 2 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGVRGLY*GCFQCL
Trigger: CAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTAC...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAATTCAGAAGCTAGTATaGAAAGGTGATTTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPIQKLV*KGDLCD
Trigger: GTCACACAAATCACCTTTCCATACTAGCTTCTGAAT...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 90 bp GGAAGCTGGGGGACCCTACAAGGATCCTTGGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: GSWGTLQGSLAGKQG*CSFEGFTVSESLSF
Trigger: GAAGCTGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTGCCAAGGATCCTTGTAGGGTCCCCCAGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR TCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCATCTTGATCCCAGCCTaGCTGCTGCTACATCTAATC +
Preference number: 2 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLILIPA*LLLHLI
Trigger: GATTAGATGTAGCAGCAGTCAGGCTGGGATCAAGAT...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGTTCCCCACTGTCCTCTaGTCCCCTCGTGACAGAACC +
Preference number: 2 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKFPTVL*SPRDRT
Trigger: GGTTCTGTCACGAGGGGATCAGAGGACAGTGGGGAA...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGAAGGGTGGACTTCGTaGGAACCTGGCTTGCTTTCC +
Preference number: 2 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSEGWTS*EPGLLS
Trigger: GGAAAGCAAGCCAGGTTCTCACGAAGTCCACCCTTC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTCCCTTACCTGAAGAATaGTGTTCTTTCCTAGCCACC +
Preference number: 2 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIPLPEE*CSFLAT
Trigger: GGTGGCTAGGAAAGAACAGCATTCTTCAGGTAAGGG...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTCATAATTCGTCCTCTTaGACCCACCTACCCCTAGTT +
Preference number: 2 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIHNSSS*THLPLV
Trigger: AACTAGGGGTAGGTGGGTGCAAGAGGACGAATTATG...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCGCATGGGATAAGACCTaGCCTTCTTGCTTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGAWDKT*PSCFLP
Trigger: TGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGC...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATC +
Preference number: 2 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVTLVSS*LWKVLI
Trigger: GATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGT...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTTGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 2 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 90 bp CATAATTCGTCCTCTTGCACCCACCTACCCCTAGTTAGCTCTTGCTaGTGGAAAGTCCTCATCTCCCAGCTTGATGGCTTCCTCCCAAGT +
Preference number: 2 (lower is better)
Translates to: HNSSSCTHLPLVSSC*WKVLISQLDGFLPS
Trigger: ACTTGGGAGGAAGCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGGTAGGTGGGTGCAAGAGGACGAATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGCCTCCCACTTGCCCTaGAAGGCCAAGATCAAGATG +
Preference number: 2 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKASHLP*KAKIKM
Trigger: CATCTTGATCTTGGCCTTTCAGGGCAAGTGGGAGGC...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCC +
Preference number: 2 (lower is better)
Translates to: AQACRGNATGQVTGQSSYQKLKS*CHQRTS
Trigger: GGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR GCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATTCTGGCCTCCCACTTaGCCTGAAAGGCCAAGATCA +
Preference number: 2 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVFWPPT*PERPRS
Trigger: TGATCTTGGCCTTTCAGGGCAAGTGGGAGGCCAGAA...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTCAAATTTCAGGACCTaGAGACAGTACAGGCTAGAT +
Preference number: 2 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKSNFRT*RQYRLD
Trigger: ATCTAGCCTGTACTGTCTGCAGGTCCTGAAATTTGA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTGGACCTCCACACTGCTaGAAGGCCTGGGCCATATGT +
Preference number: 2 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCGPPHC*KAWAIC
Trigger: ACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTGTTGGACCTCCACACTaGTGCAAGGCCTGGGCCATA +
Preference number: 2 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQAVGPPH*CKAWAI
Trigger: TATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAAC...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCATTTCCTCTTGTCTCTaGCATTCAGGGAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGISSCL*HSGSSF
Trigger: GAAGGAGCTCCCTGAATGGCAGAGACAAGAGGAAAT...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCCTCCCCTTGGACTTTaGCCTTCTTACTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQAPPLGL*PSYWPG
Trigger: GCCTGGCCAGTAAGAAGGGCAAAGTCCAAGGGGAGG...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATCACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTAAGGATGTCACACAGTaGACAGAAAGTCCAAGCGAG +
Preference number: 2 (lower is better)
Translates to: PTAEWSANPGARGGWNCSKDVTQ*TESPSE
Trigger: CTCGCTTGGACTTTCTGTCCACTGTGTGACATCCTT...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGGGGCCTAATGAGCTCTaGTCAATTTGTTCATTTTCC +
Preference number: 2 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQGPNEL*SICSFS
Trigger: GGAAAATGAACAAATTGACCAGAGCTCATTAGGCCC...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 90 bp GGACCCTACAAGGATCCTTGGCAGGAAAGCAGGGATTGTGTTCATTaGAGGGTTTCACTGTCAGTGAGAGTCTCAGCTTCCATGCAACTG +
Preference number: 2 (lower is better)
Translates to: GPYKDPWQESRDCVH*RVSLSVRVSASMQL
Trigger: CAGTTGCATGGAAGCTGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTGCCAAGGATCCTTGTAGGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGCCTCCCACTTGCCCTaGAAGGCCAAGATCAAGATG +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQASHLP*KAKIKM
Trigger: CATCTTGATCTTGGCCTTTCAGGGCAAGTGGGAGGC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCCTACTAAGGGGCTCTaGGCTTCTGCCCCCAGAATC +
Preference number: 2 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKPTKGL*ASAPRI
Trigger: GATTCTGGGGGCAGAAGCTCAGAGCCCCTTAGTAGG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGCCCTTCTTGCTTCTTaGCATTGGGCAGGCATTGGA +
Preference number: 2 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKALLAS*HWAGIG
Trigger: TCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGC...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
3UTR-3UTR GCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGCCCTTCTTGCTTCTTaGCATTGGGCAGGCATTGGA +
Preference number: 2 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDALLAS*HWAGIG
Trigger: TCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGC...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
3UTR-3UTR GCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTACCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATC +
Preference number: 2 (lower is better)
Translates to: QGMEFTRVQGIWFRARASTLVSS*LWKVLI
Trigger: GATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGT...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 2 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR TCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCCCACTGCAAAGACTATaGCAGCATCAAATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGPLQRL*QHQISG
Trigger: TCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGG...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGATTCCAAACCAGAAGTaGCTTGGAGGGGAGCAAGGG +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQIPNQK*LGGEQG
Trigger: CCCTTGCTCCCCTCCAAGTCACTTCTGGTTTGGAAT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGGCCTATACTGGGGCTaGTTCCAATGCCTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSGLYWG*FQCLSF
Trigger: AAAGGACAGGCATTGGAAGCAGCCCCAGTATAGGCC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGCATGGGATAAGACCTaGCCTTCTTGCTTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKAWDKT*PSCFLP
Trigger: TGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGC...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
3UTR-3UTR CCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCCCTCGAGACCTCTTTaGCAGCCTGAATGTCAAAGC +
Preference number: 2 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQAPSRPL*QPECQS
Trigger: GCTTTGACATTCAGGCTGCCAAAGAGGTCTCGAGGG...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGTAAGAGGCCTATACTaGGGCTGCTTCCAATGCCTG +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSVRGLY*GCFQCL
Trigger: CAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTAC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCAGTCTGGTCAGAGCTaGAGCCCTACAAGGGTAAGA +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQQSGQS*SPTRVR
Trigger: TCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCAGTCTGGTCAGAGCTaGAGCCCTACAAGGGTAAGA +
Preference number: 2 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQAQSGQS*SPTRVR
Trigger: TCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTG...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTTGCTTCTTGCCATTaGGCAGGCATTGGAGACCCT +
Preference number: 2 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCLASCH*AGIGDP
Trigger: AGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAG...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGGAGGATCTACTGCACTaGCAAGGGTGTCCTACAGAG +
Preference number: 2 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKEDLLH*QGCPTE
Trigger: CTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTC...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGAGTACCTCTCAGCTCTaGACCCCAGTGACTTACTCA +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQSTSQL*TPVTYS
Trigger: TGAGTAAGTCACTGGGGTTCAGAGCTGAGAGGTACT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAGTACCTCTCAGCTCTaGACCCCAGTGACTTACTCA +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSSTSQL*TPVTYS
Trigger: TGAGTAAGTCACTGGGGTTCAGAGCTGAGAGGTACT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCTAATCCCCTACCAATaGCTCCTGTCCCTAAACTCC +
Preference number: 2 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFLIPYQ*LLSLNS
Trigger: GGAGTTTAGGGACAGGAGGCATTGGTAGGGGATTAG...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACATTTTCCAAAGCCCTaGCATGCTGCCATCCCACTT +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSHFPKP*HAAIPL
Trigger: AAGTGGGATGGCAGCATGGCAGGGCTTTGGAAAATG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 2 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCATGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTAGGATGGAACTGCAGTaGACAGTGAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCRMELQ*TVRTSS
Trigger: GGAAGAAGTCCTCACTGTCCACTGCAGTTCCATCCT...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGTATAAGCTCGGAGTTTaGACGGAGGGTCTGGACCTC +
Preference number: 2 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKYKLGV*TEGLDL
Trigger: GAGGTCCAGACCCTCCGTCCAAACTCCGAGCTTATA...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGTCATTTTCCACCGAGTaGGCTTTTCTATGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQSFSTE*AFLWEQ
Trigger: CTGCTCCCATAGAAAAGCTCACTCGGTGGAAAATGA...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCCTCGCCCCTTCTTaGCTTTTCTTCTCAACTACC +
Preference number: 2 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKLLAPS*LFFSTT
Trigger: GGTAGTTGAGAAGAAAAGTCAAGAAGGGGCGAGGAG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAGCTCCAATGGCTTTTaGCAGGCAATTCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSSSNGF*QAILPP
Trigger: TGGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR GCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGATCAAAGGACATCCCTaGCCCATTCACATCTCTGTC +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQIKGHP*PIHISV
Trigger: GACAGAGATGTGAATGGGGCAGGGATGTCCTTTGAT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR GCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGAAGTATGGAGTTCAATaGCCGCCTCCGCTTGGCCAC +
Preference number: 2 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVKYGVQ*PPPLGH
Trigger: GTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTT...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCC +
Preference number: 2 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSQKLKS*CHQRTS
Trigger: GGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCCACTGCAAAGACTATaGCAGCATCAAATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQPLQRL*QHQISG
Trigger: TCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 90 bp GAGAGTTCGAGGGACAGAATTCAGAAGCTAGTATGGAAAGGTGATTaGTGTGACAAATCAAGTTCAAATTCTGATTCTGCCACTTCCTGC +
Preference number: 2 (lower is better)
Translates to: ESSRDRIQKLVWKGD*CDKSSSNSDSATSC
Trigger: GCAGGAAGTGGCAGAATCAGAATTTGAACTTGATTTGTCACACAAATCACCTTTCCATACTAGCTTCTGAATTCTGTCCCTCGAACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 90 bp AATCAAGTTCAAATTCTGATTCTGCCACTTCCTGCCTGTCAAACCTaGGGAAGTTGTTCAACCTACCAAAACCTCAGTTTCTTCAACTAT +
Preference number: 2 (lower is better)
Translates to: NQVQILILPLPACQT*GSCSTYQNLSFFNY
Trigger: ATAGTTGAAGAAACTGAGGTTTTGGTAGGTTGAACAACTTCCCAAGGTTTGACAGGCAGGAAGTGGCAGAATCAGAATTTGAACTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR TCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGTCTCTGACTTTACCTTaGGATCTGTCTTCATACCCT +
Preference number: 2 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGSLTLP*DLSSYP
Trigger: AGGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGA...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp TTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGCCGCTTTAGGAAGGTA +
Preference number: 3 (lower is better)
Translates to: FNARLRLATAPC*CSQASRRFRKV
Trigger: TACCTTCCTAAAGCGGCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR CCA 72 bp TGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGCAGCAGAAGGGCCGCC +
Preference number: 3 (lower is better)
Translates to: CCWEFPPPFVMQ*RGLSSGSRRAA
Trigger: GGCGGCCCTTCTGCTGCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR TCA 72 bp CTCAGCTCCACCACCCCAGCGACCTTTCCGTGTCTGTaGTCACAAGCGGACCATCCGGAAAGGCCTGACAGC +
Preference number: 3 (lower is better)
Translates to: LSSTTPATFPCL*SQADHPERPDS
Trigger: GCTGTCAGGCCTTTCCGGATGGTCCGCTTGTGATCACAGACACGGAAAGGTCGCTGGGGTGGTGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAGGCCTGGGCCATATGTaGCTGGGAATTTCCTCCACC +
Preference number: 3 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSGLGHM*LGISST
Trigger: GGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCTCGCCCGATTCACCTTaGACGTGTACAAGCAAAACC +
Preference number: 3 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALSPDSP*TCTSKT
Trigger: GGTTTTGCTTGTACACGTCAAAGGTGAATCGGGCGA...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp AGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCCTaGGACGGGAGAGGCCCAAGCACAGCAAGGACATCG +
Preference number: 3 (lower is better)
Translates to: RVSYRVECCHMA*DGRGPSTARTS
Trigger: CGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATGACAGCACTCCACTCTGTAGGACACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp GGACCTCCACACTGCTGCAAGGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCCTTCGTCATGCAGTGG +
Preference number: 3 (lower is better)
Translates to: GPPHCCKAWAIC*WEFPPPFVMQW
Trigger: CCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR GCA 72 bp TCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTaGTGTCATATGGCCTGGGACGGGAGAGGCCCAAGC +
Preference number: 3 (lower is better)
Translates to: STALTRVSYRVE*CHMAWDGRGPS
Trigger: GCTTGGGCCTCTCCCGTCCCAGGCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATaGCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RSKASVFKYGVQ*PPPLGHRTLLL
Trigger: CAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR CCA 72 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATaGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCAC +
Preference number: 3 (lower is better)
Translates to: TQSQIQSLSLQV*SSMPASAWPPH
Trigger: GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR-3UTR CAA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGGCCTGGGCCATATGTaGCTGGGAATTTCCTCCACC +
Preference number: 3 (lower is better)
Translates to: AQACRGNATGQVTGQSSYGLGHM*LGISST
Trigger: GGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGGCCAGAGTCCAGGCTaGACTCATTCCCACCTTGTC +
Preference number: 3 (lower is better)
Translates to: AQACRGNATGQVTGQSSYGQSPG*THSHLV
Trigger: GACAAGGTGGGAATGAGTCAAGCCTGGACTCTGGCC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp AGGACTTCTTCCAGCTGCTGGAGGATGACACGTGCCTaGTGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTA +
Preference number: 3 (lower is better)
Translates to: RTSSSCWRMTRA*WCCSLVRAGAL
Trigger: TAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp TGGAGCCCTACAAGGGTAAGAGGCCTATACTGGGGCTaGTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGC +
Preference number: 3 (lower is better)
Translates to: WSPTRVRGLYWG*FQCLSFRAFPG
Trigger: GCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTACCCTTGTAGGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp AGTGAGGACTTCTTCCAGCTGCTGGAGGATGACACGTaGCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGC +
Preference number: 3 (lower is better)
Translates to: SEDFFQLLEDDT*LMVLQSGQSWS
Trigger: GCTCCAGCTCTGACCAGACTGCAACACCATCAGGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCTCACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGCCATTGGGCAGGCATaGGAGACCCTACTGCTGAAT +
Preference number: 3 (lower is better)
Translates to: AQACRGNATGQVTGQSSYAIGQA*ETLLLN
Trigger: ATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCATCAAACCTTGGGAAGTaGTTCAACCTACCAAAACCT +
Preference number: 3 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPSNLGK*FNLPKP
Trigger: AGGTTTTGGTAGGTTGAACAACTTCCCAAGGTTTGA...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp TGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATaGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAAC +
Preference number: 3 (lower is better)
Translates to: CHWAGIGDPTAE*SANPGARGGWN
Trigger: GTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp GTATCTAATATAAGCTCGGAGTTTGGACGGAGGGTCTaGACCTCAGCTCCACCACCCCAGCGACCTTTCCGT +
Preference number: 3 (lower is better)
Translates to: VSNISSEFGRRV*TSAPPPQRPFR
Trigger: ACGGAAAGGTCGCTGGGGTGGTGGAGCTGAGGTCCAGACCCTCCGTCCAAACTCCGAGCTTATATTAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp GGGCAACAACCTGAATACCTTTTCAAGGCTCTGGCTTaGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAG +
Preference number: 3 (lower is better)
Translates to: GQQPEYLFKALA*AQACRGNATGQ
Trigger: CTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAAAGGTATTCAGGTTGTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACAGGGAGCTCCTTCGTaGGACCTCCACACTGCTGCA +
Preference number: 3 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVQGAPS*DLHTAA
Trigger: TGCAGCAGTGTGGAGGTCCAACGAAGGAGCTCCCTG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGTCATCTGATTTCCTCTaGTCTCTGCCATTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQSSDFL*SLPFRE
Trigger: CTCCCTGAATGGCAGAGACAAGAGGAAATCAGATGA...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACACTTCTGGAGAACTCTaGAGGGTGTGGGAAGTGAGG +
Preference number: 3 (lower is better)
Translates to: AQACRGNATGQVTGQSSYTSGEL*RVWEVR
Trigger: CCTCACTTCCCACACCCTCAAGAGTTCTCCAGAAGT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp CAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTaGTGGAGATTAGTGGTGGGTGTCTGGTATGAGGAT +
Preference number: 3 (lower is better)
Translates to: QKVQAREGLTQC*WRLVVGVWYED
Trigger: ATCCTCATACCAGACACCCACCACTAATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp TCGTCCTCTTGCACCCACCTACCCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATCTCCCAGCTTGATGGC +
Preference number: 3 (lower is better)
Translates to: SSSCTHLPLVSS*LWKVLISQLDG
Trigger: GCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGGTAGGTGGGTGCAAGAGGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp AAGGGGCATGGGATAAGACCTGCCCTTCTTGCTTCTTaGCATTGGGCAGGCATTGGAGACCCTACTGCTGAA +
Preference number: 3 (lower is better)
Translates to: KGHGIRPALLAS*HWAGIGDPTAE
Trigger: TTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
3UTR CCA 72 bp TCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTaGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTT +
Preference number: 3 (lower is better)
Translates to: SGLGSSLQGKCN*PGHRAIKLLCV
Trigger: AACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGAGKQG*CSFEGF
Trigger: GAAACCCTCAAATGAACACAATCCCTGCTTTCCTGC...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGAATGCCCGCCTCCGCTaGGCCACCGCACCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVNARLR*ATAPCC
Trigger: GCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATT...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR TCA 72 bp AGGCTAGATAACCCACCCAATTTCCCCACTGTCCTCTaGTCCCCTCGTGACAGAACCTTTCAGCATAACGCC +
Preference number: 3 (lower is better)
Translates to: RLDNPPNFPTVL*SPRDRTFQHNA
Trigger: GGCGTTATGCTGAAAGGTTCTGTCACGAGGGGATCAGAGGACAGTGGGGAAATTGGGTGGGTTATCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp CACAGAGCCACTCATAAACTGCAGCTTCTCAGAGCCTaGGAGCCAGAAACCGTCCCCAGAAATTCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: HRATHKLQLLRA*EPETVPRNSLH
Trigger: ATGGAGGGAATTTCTGGGGACGGTTTCTGGCTCTCAGGCTCTGAGAAGCTGCAGTTTATGAGTGGCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp CAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCCCTGCCCCATTCACAT +
Preference number: 3 (lower is better)
Translates to: QSWDTAHQKLKS*CHQRTSLPHSH
Trigger: ATGTGAATGGGGCAGGGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCCAGAAGCTAAAGTCTaGATGCCATCAAAGGACATC +
Preference number: 3 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGPEAKV*MPSKDI
Trigger: GATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR TCA 72 bp CCAGTGCTGATGGAGATTAGTGGTGGGTGTCTGGTATaGGGATCTACTGCACTGACAAGGGTGTCCTACAGA +
Preference number: 3 (lower is better)
Translates to: PVLMEISGGCLV*GSTALTRVSYR
Trigger: TCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTCATACCAGACACCCACCACTAATCTCCATCAGCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp GCCTCACATCCCAAGTCTATACCCTTACCTGAAGAATaGTGTTCTTTCCTAGCCACCTTTCTGGCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: ASHPKSIPLPEE*CSFLATFLASH
Trigger: GTGGGAGGCCAGAAAGGTGGCTAGGAAAGAACAGCATTCTTCAGGTAAGGGTATAGACTTGGGATGTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp TTCCTCTCTAGCTTAACCCTGATCCTGGGGACCAGGTaGAGGAGGAGTTGTGGAATTGTCAAGGATGTCACA +
Preference number: 3 (lower is better)
Translates to: FLSSLTLILGTR*RRSCGIVKDVT
Trigger: TGTGACATCCTTGACAATTCCACAACTCCTCCTGCACCTGGTCCCCAGGATCAGGGTTAAGCTAGAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp CCTGGCTTGCTTTCCAATTCCAAACCAGAAGTGACTTaGAGGGGAGCAAGGGGAGATGCCAATGACATGGTA +
Preference number: 3 (lower is better)
Translates to: PGLLSNSKPEVT*RGARGDANDMV
Trigger: TACCATGTCATTGGCATCTCCCCTTGCTCCCCTCCAAGTCACTTCTGGTTTGGAATTGGAAAGCAAGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp ATCTCTGTCACGTCCACCCTAGTTAGCTCTTGCTTGTaGAAAGTCCTCATCTCCCAGCTTGATGGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: ISVTSTLVSSCL*KVLISQLDGFL
Trigger: GAGGAAGCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGTGGACGTGACAGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACAGGTGCAGGAGGAGTaGTGGAATTGTCAAGGATGT +
Preference number: 3 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSQVQEE*WNCQGC
Trigger: ACATCCTTGACAATTCCACAACTCCTCCTGCACCTG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCATCTTGCTTCTTGCCATaGGGCAGGCATTGGAGACCC +
Preference number: 3 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSSCFLP*GRHWRP
Trigger: GGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGA...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp TTAGTGGTGGGTGTCTGGTATGAGGATCTACTGCACTaGCAAGGGTGTCCTACAGAGTGGAGTGCTGTCATA +
Preference number: 3 (lower is better)
Translates to: LVVGVWYEDLLH*QGCPTEWSAVI
Trigger: TATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTCATACCAGACACCCACCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp GAGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTaGAAAGACTATGACAGCATCAAATTTCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: ELLPPESFQPTH*KDYDSIKFQDL
Trigger: CAGGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp ACTTCTGGAGAACTCTTGAGGGTGTGGGAAGTGAGGTaGAGCATTGTAGATAAGACAGAAGGGTGGACTTCG +
Preference number: 3 (lower is better)
Translates to: TSGELLRVWEVR*SIVDKTEGWTS
Trigger: CGAAGTCCACCCTTCTGTCTTATCTACAATGCTGCACCTCACTTCCCACACCCTCAAGAGTTCTCCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp ATTCACATCTCTGTCACGTCCACCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATCTCCCAGCTTGATGGC +
Preference number: 3 (lower is better)
Translates to: IHISVTSTLVSS*LWKVLISQLDG
Trigger: GCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGTGGACGTGACAGAGATGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
3UTR TCA 72 bp TGTACAAGCAAAACCCTCGAGACCTCTTTGGCAGCCTaGATGTCAAAGCCACATTCTACGGGCTCTACTCTA +
Preference number: 3 (lower is better)
Translates to: CTSKTLETSLAA*MSKPHSTGSTL
Trigger: TAGAGTAGAGCCCGTAGAATGTGGCTTTGACATTCAGGCTGCCAAAGAGGTCTCGAGGGTTTTGCTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp ACATGTCATCACCAAAGACACACATACAAGCTCCAATaGCTTTTGCCAGGCAATTCTTCCTCCAGGACCCCA +
Preference number: 3 (lower is better)
Translates to: TCHHQRHTYKLQ*LLPGNSSSRTP
Trigger: TGGGGTCCTGGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCTTGTATGTGTGTCTTTGGTGATGACATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp TCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTaGGTATATCCAAAACAAGGGGGTCAGGGTATGGAG +
Preference number: 3 (lower is better)
Translates to: SSQQTVRESCST*VYPKQGGQGME
Trigger: CTCCATACCCTGACCCCCTTGTTTTGGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR-3UTR CAA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGGAGGAGTTGTGGAATaGTCAAGGATGTCACACAGT +
Preference number: 3 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSGGVVE*SRMSHS
Trigger: ACTGTGTGACATCCTTGACAATTCCACAACTCCTCC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp CCCAGAATCATTCCAACCGACCCACTGCAAAGACTATaGCAGCATCAAATTTCAGGACCTGCAGACAGTACA +
Preference number: 3 (lower is better)
Translates to: PRIIPTDPLQRL*QHQISGPADST
Trigger: TGTACTGTCTGCAGGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTaGGACATCGACCAATGTCTAGAGCCAACTGATGGA +
Preference number: 3 (lower is better)
Translates to: TFRRYQSAGKSK*DIDQCLEPTDG
Trigger: TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCTCTCTGACTTTACCTaGAGATCTGTCTTCATACCC +
Preference number: 3 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCLSDFT*RSVFIP
Trigger: GGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGAG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGAGGGATTGTGTTCATTaGAGGGTTTCACTGTCAGTG +
Preference number: 3 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQRDCVH*RVSLSV
Trigger: CACTGACAGTGAAACCCTCAAATGAACACAATCCCT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR TCA 72 bp CAAAGCCACATTCTACGGGCTCTACTCTATGAGTTGTaGCTTTCAAGGACTTGGCCCAAAGAAAGTACTCAG +
Preference number: 3 (lower is better)
Translates to: QSHILRALLYEL*LSRTWPKESTQ
Trigger: CTGAGTACTTTCTTTGGGCCAAGTCCTTGAAAGTCACAACTCATAGAGTAGAGCCCGTAGAATGTGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR TCA 72 bp TGCAGCATTGTAGATAAGACAGAAGGGTGGACTTCGTaGGAACCTGGCTTGCTTTCCAATTCCAAACCAGAA +
Preference number: 3 (lower is better)
Translates to: CSIVDKTEGWTS*EPGLLSNSKPE
Trigger: TTCTGGTTTGGAATTGGAAAGCAAGCCAGGTTCTCACGAAGTCCACCCTTCTGTCTTATCTACAATGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCTCTGACTTTACCTaGAGATCTGTCTTCATACCC +
Preference number: 3 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKLSDFT*RSVFIP
Trigger: GGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGAG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR-3UTR CAA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGGTGACTTTCAAGGACTaGGCCCAAAGAAAGTACTCA +
Preference number: 3 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKVTFKD*AQRKYS
Trigger: TGAGTACTTTCTTTGGGCCAAGTCCTTGAAAGTCAC...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR GCA 72 bp ACTGCAAAGACTATGACAGCATCAAATTTCAGGACCTaGAGACAGTACAGGCTAGATAACCCACCCAATTTC +
Preference number: 3 (lower is better)
Translates to: TAKTMTASNFRT*RQYRLDNPPNF
Trigger: GAAATTGGGTGGGTTATCTAGCCTGTACTGTCTGCAGGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CCA 72 bp AGGGAGAGTTCGAGGGACAGAATTCAGAAGCTAGTATaGAAAGGTGATTTGTGTGACAAATCAAGTTCAAAT +
Preference number: 3 (lower is better)
Translates to: RESSRDRIQKLV*KGDLCDKSSSN
Trigger: ATTTGAACTTGATTTGTCACACAAATCACCTTTCCATACTAGCTTCTGAATTCTGTCCCTCGAACTCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAGAGGGGGCTGAGCAGTaGCAGCAGAAGGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPEGAEQ*QQKGRL
Trigger: GAGGCGGCCCTTCTGCTGCCACTGCTCAGCCCCCTC...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCCCCCGCGCCCCCGTTTaGCACCAGCTGGGAACCGGC +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATPRAPV*HQLGTG
Trigger: GCCGGTTCCCAGCTGGTGGCAAACGGGGGCGCGGGG...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCAGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCACCCCAAGGCTCTGGCTaGGGCCATTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPPQGSG*GHCHLV
Trigger: CACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGG...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACGTGCGGGTGCGAATCTaGAGCCGGCTCCGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHVRVRI*SRLRAP
Trigger: GGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCAC...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALEALES*GLQHQQ
Trigger: CTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTC...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAGCTTCCGGGCTCAGGTaGGGGTGCGAATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSASGLR*GCESGA
Trigger: GGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGC...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCACGGCGGCGCAGCTTaGGCGTCACAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEHGGAA*ASQRGW
Trigger: CCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGTGCGGGTGCGAATCTaGAGCCGGCTCCGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATVRVRI*SRLRAP
Trigger: GGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCAC...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCAGGGGCTGGTCAGGATaGCATCGAGCACATGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALRGWSG*HRAHES
Trigger: GCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCT...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAAAGCGAGGGAGGGTCTaGCCCAGTGCTGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPKRGRV*PSADGD
Trigger: ATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTT...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTCCCCGCGCCCCCGTTTaGCACCAGCTGGGAACCGGC +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASAPRAPV*HQLGTG
Trigger: GCCGGTTCCCAGCTGGTGGCAAACGGGGGCGCGGGG...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGGGCTCAGGTGCGGGTaGGAATCTGGAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATGLRCG*ESGAGS
Trigger: GGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCC...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGGGGCTCAGGTGCGGGTaGGAATCTGGAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPGLRCG*ESGAGS
Trigger: GGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCC...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGGGCTCAGGTGCGGGTaGGAATCTGGAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEGLRCG*ESGAGS
Trigger: GGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAGTTGGCAATGGGATGTaGAGCCAGGGTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPVGNGM*SQGLQL
Trigger: CAGCTGCAGACCCTGGCTGCACATCCCATTGCCAAC...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCATCTGGCTGCGGCCATTaGCACCTGGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSSGCGH*HLVLCR
Trigger: CCTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGA...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAGAAAGGCCTGACAGCTaGCACCCGCCAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSERPDS*HPPGAA
Trigger: AGCAGCTCCTGGCGGGTGGCAGCTGTCAGGCCTTTC...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCGTTTGCCACCAGCTaGGAACCGGCGCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHPFATS*EPAPHL
Trigger: AAGGTGGGGCGCCGGTTCCCAGCTGGTGGCAAACGG...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCACTCCCCACTCCACAGTaGGCTTGTCAAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPLPTPQ*ACQAPE
Trigger: CTCAGGAGCTTGACAAGCCCACTGTGGAGTGGGGAG...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGGCTTCCGGGCTCAGGTaGGGGTGCGAATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPASGLR*GCESGA
Trigger: GGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGC...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCAGCTTCCGGGCTCAGGTaGGGGTGCGAATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KPQSSSMEFNARLRLATAASGLR*GCESGA
Trigger: GGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGC...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCCCCAAGGCTCTGGCTaGGGCCATTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEPQGSG*GHCHLV
Trigger: CACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCATTGGCCACCGCACCCTaGTGCTGTTCCCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSLATAP*CCSQAS
Trigger: AGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAA...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCTGGAGGATGACACGTaGCTGATGGTGTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALLEDDT*LMVLQS
Trigger: AGACTGCAACACCATCAGGCACGTGTCATCCTCCAG...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCGCGCCCCACCTTGTGTaGAGAGCGCGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGAPHLV*RARTLP
Trigger: GGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGC...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCACCTCCAGGGTCTCCGTaGGACCATCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPPPGSP*DHPFHP
Trigger: AGGATGGAAAGGATGGTCCCACGGAGACCCTGGAGG...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTGCGGCCATTGCCACCTaGTGCTCTGCAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVAAIAT*CSAGTA
Trigger: GGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGC...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCATTTGGACGGAGGGTCTaGACCTCAGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSFGRRV*TSAPPP
Trigger: GGGTGGTGGAGCTGAGGTCCAGACCCTCCGTCCAAA...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCTCCAGGACCCCATCTaGCCCCTCCCTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGLQDPI*PLPHPS
Trigger: GGAGGGATGAGGGAGGGGCCAGATGGGGTCCTGGAG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR TCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLVCSCP*KCSSKR
Trigger: CCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGAC...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCAGCCAGGGTCTGCAGCTaGCCCTGCAAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KPQSSSMEFNARLRLATAARVCS*PCKCSS
Trigger: TGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGC...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGGCCAGGGTCTGCAGCTaGCCCTGCAAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPARVCS*PCKCSS
Trigger: TGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGC...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTGCCAGGGTCTGCAGCTaGCCCTGCAAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPARVCS*PCKCSS
Trigger: TGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGC...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGTGTGCAGCCAGGGTCTaGAGCTGCCCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVECAARV*SCPCKC
Trigger: GCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACA...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGTCTGGCTGCGGCCATTaGCACCTGGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVESGCGH*HLVLCR
Trigger: CCTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGA...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCTCTGGCTGCGGCCATTaGCACCTGGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATSGCGH*HLVLCR
Trigger: CCTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGA...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAGCCCTTCTTGCTTCTTaGCATTGGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPALLAS*HWAGIG
Trigger: TCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGC...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTCCACCCGCCCCCACCTaGACTCCATGGTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIPPAPT*TPWSLP
Trigger: AGGGAGAGACCATGGAGTGCAGGTGGGGGCGGGTGG...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACGGGAACCACGGGGCCTaGCTCTCTCAGACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHGNHGA*LSQTPE
Trigger: TTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCC...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGCATCCCCCAAGGCTCTaGCTGCGGCCATTGCCACCT +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPHPPRL*LRPLPP
Trigger: AGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATG...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGAGCACACGGCTGCCATaGCGACTACAGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVESTRLP*RLQARA
Trigger: GGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCT...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGAGCACACGGCTGCCATaGCGACTACAGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKSTRLP*RLQARA
Trigger: GGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCACCCTCGAGACCTCTTTaGCAGCCTGAATGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPPSRPL*QPECQS
Trigger: GCTTTGACATTCAGGCTGCCAAAGAGGTCTCGAGGG...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTTGGACCCCGCATCGGTaGCAGGCCACAGTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPWTPHR*QATVRK
Trigger: CTTGCGCACTGTGGCCTGTCACCGATGCGGGGTCCA...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCTGGACCCCGCATCGGTaGCAGGCCACAGTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: HPVPDPKPQSSSMEFNARWTPHR*QATVRK
Trigger: CTTGCGCACTGTGGCCTGTCACCGATGCGGGGTCCA...GCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTTGGACCCCGCATCGGTaGCAGGCCACAGTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLWTPHR*QATVRK
Trigger: CTTGCGCACTGTGGCCTGTCACCGATGCGGGGTCCA...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTTCTGTGCTTCAGATaGTTGGGAACCACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLLLCFR*LGTTGP
Trigger: AGGCCCCGTGGTTCCCAATCATCTGAAGCACAGAAG...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAGCTGGCTTACATTCCTaGGCTGGGGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSAGLHS*AGVFCA
Trigger: AGCACAGAAGACCCCAGCTCAGGAATGTAAGCCAGC...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACGGGACTGCCATCTACTaGGGAACCGCGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHGTAIY*GTASTQ
Trigger: CTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCC...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGCCTACTAAGGGGCTCTaGGCTTCTGCCCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQPTKGL*ASAPRI
Trigger: GATTCTGGGGGCAGAAGCTCAGAGCCCCTTAGTAGG...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCACCCTGCCCCATGTGTaGTTCGCGACCTGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFTLPHV*FATCPA
Trigger: AGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGT...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACGTTGGCAATGGGATGTaGAGCCAGGGTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHVGNGM*SQGLQL
Trigger: CAGCTGCAGACCCTGGCTGCACATCCCATTGCCAAC...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: FRKVVKATFRATWWPKGSGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...AGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGCCACCTGGTGCTCTaGAGGCACTGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASACHLVL*RHCPLL
Trigger: GAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCA...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTTGCCACCTGGTGCTCTaGAGGCACTGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLCHLVL*RHCPLL
Trigger: GAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCA...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCCCCCAAGGCTCTGGCTaGGGCCATTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASPQGSG*GHCHLV
Trigger: CACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGG...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACACGGCGGCGCAGCTTaGGCGTCACAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVHGGAA*ASQRGW
Trigger: CCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACACGGCGGCGCAGCTTaGGCGTCACAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSHGGAA*ASQRGW
Trigger: CCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTGTCCCTTTAGGTTCTaGAGCACACGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKCPFRF*STRRRS
Trigger: GCTGCGCCGCCGTGTGCTGCAGAACCTAAAGGGACA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAAGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQATAPC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGC...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPAATAPC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGC...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLATAPC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGC...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCATTGGCCACCGCACCCTaGTGCTGTTCCCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KPQSSSMEFNARLRLATALATAP*CCSQAS
Trigger: AGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAA...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCATGGGGCTGCTTCCAATaGCTGTCCTTTAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPWGCFQ*LSFRAF
Trigger: GAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCA...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTGGGAACCACGGGGCCTaGCTCTCTCAGACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPGNHGA*LSQTPE
Trigger: TTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCC...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGGGAACCACGGGGCCTaGCTCTCTCAGACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEGNHGA*LSQTPE
Trigger: TTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVEALES*GLQHQQ
Trigger: CTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTC...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGACCCCTGGGTGGCCCTaGGCCAATACAGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKTPGWP*ANTASK
Trigger: CTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCCCTGGGTGGCCCTaGGCCAATACAGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVTPGWP*ANTASK
Trigger: CTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGT...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCGCGGCCATTGCCACCTaGTGCTCTGCAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: HPVPDPKPQSSSMEFNARAAIAT*CSAGTA
Trigger: GGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGC...GCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGCGTCACAGAGGGGCTaGTCAGGATGGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEASQRG*SGWHRA
Trigger: TGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTGCGTCACAGAGGGGCTaGTCAGGATGGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVASQRG*SGWHRA
Trigger: TGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGC...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTATGCCCGCCTCCGCTTaGCCACCGCACCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FRKVVKATFRATWWPKGSMPASA*PPHPAA
Trigger: AGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCAT...AGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCTTAGTGGTGGGTGTCTaGTATGAGGATCTACTGCAC +
Preference number: 4 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALLVVGV*YEDLLH
Trigger: GTGCAGTAGATCCTCATACCAGACACCCACCACTAA...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAAGGATGGAACTGCAGTaGACAGTGAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPRMELQ*TVRTSS
Trigger: GGAAGAAGTCCTCACTGTCCACTGCAGTTCCATCCT...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAACTCCAGGACCCCATCTaGCCCCTCCCTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQLQDPI*PLPHPS
Trigger: GGAGGGATGAGGGAGGGGCCAGATGGGGTCCTGGAG...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGATGGCATCGAGCACATaGGAGCCAGCGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEMASST*EPAGLW
Trigger: CCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCAT...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTCCCCACTGTCCTCTaGTCCCCTCGTGACAGAACC +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKFPTVL*SPRDRT
Trigger: GGTTCTGTCACGAGGGGATCAGAGGACAGTGGGGAA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTCCTACTAAGGGGCTCTaGGCTTCTGCCCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVPTKGL*ASAPRI
Trigger: GATTCTGGGGGCAGAAGCTCAGAGCCCCTTAGTAGG...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCCTACTAAGGGGCTCTaGGCTTCTGCCCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGPTKGL*ASAPRI
Trigger: GATTCTGGGGGCAGAAGCTCAGAGCCCCTTAGTAGG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCAACCTCTTTGGCAGCCTaGATGTCAAAGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPTSLAA*MSKPHS
Trigger: AGAATGTGGCTTTGACATTCAGGCTGCCAAAGAGGT...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAAGCGAGGGAGGGTCTaGCCCAGTGCTGATGGAGAT +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGKRGRV*PSADGD
Trigger: ATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCACCCTGCCCCATGTGTaGTTCGCGACCTGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGTLPHV*FATCPA
Trigger: AGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGT...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCACCCTGCCCCATGTGTaGTTCGCGACCTGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGTLPHV*FATCPA
Trigger: AGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGT...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACCCCGCGCCCCCGTTTaGCACCAGCTGGGAACCGGC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSPRAPV*HQLGTG
Trigger: GCCGGTTCCCAGCTGGTGGCAAACGGGGGCGCGGGG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAGCTGCCCCTGCAAGTaGTCCTCAAAGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGSCPCK*SSKRLW
Trigger: CCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCAGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KPQSSSMEFNARLRLATAVCSCP*KCSSKR
Trigger: CCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGAC...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEVCSCP*KCSSKR
Trigger: CCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGAC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGGCCAGGGTCTGCAGCTaGCCCTGCAAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGARVCS*PCKCSS
Trigger: TGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGC...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTTGTGCAGCCAGGGTCTaGAGCTGCCCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPCAARV*SCPCKC
Trigger: GCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACA...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGTGCAGCCAGGGTCTaGAGCTGCCCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASACAARV*SCPCKC
Trigger: GCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACA...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGTTGGCAATGGGATGTaGAGCCAGGGTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATVGNGM*SQGLQL
Trigger: CAGCTGCAGACCCTGGCTGCACATCCCATTGCCAAC...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGTTGGCAATGGGATGTaGAGCCAGGGTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEVGNGM*SQGLQL
Trigger: CAGCTGCAGACCCTGGCTGCACATCCCATTGCCAAC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCTGCCACCTGGTGCTCTaGAGGCACTGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGCHLVL*RHCPLL
Trigger: GAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCA...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTCTGGCTGCGGCCATTaGCACCTGGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLSGCGH*HLVLCR
Trigger: CCTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGA...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAACACGGCGGCGCAGCTTaGGCGTCACAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQHGGAA*ASQRGW
Trigger: CCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTG...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTCCGGGCCCTCAAGGCTaGTCCACTCCAGATGGCATC +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPPGPQG*STPDGI
Trigger: GATGCCATCTGGAGTGGAGCAGCCTTGAGGGCCCGG...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTTGGCCACCGCACCCTaGTGCTGTTCCCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYLATAP*CCSQAS
Trigger: AGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAA...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACAAGTATGGAGTTCAATaGCCGCCTCCGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHKYGVQ*PPPLGH
Trigger: GTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTT...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTGGACCTCCACACTGCTaGAAGGCCTGGGCCATATGT +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGGPPHC*KAWAIC
Trigger: ACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGGTGCGGGTGCGAATCTaGAGCCGGCTCCGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKVRVRI*SRLRAP
Trigger: GGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCAC...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGTGCCAGTCCTGTTCGTaGACAAAGCTAGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQCQSCS*TKLGPE
Trigger: CTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCA...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCGGGAACCACGGGGCCTaGCTCTCTCAGACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFGNHGA*LSQTPE
Trigger: TTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCC...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGAAGGGAAGTTGGCAATaGGATGTGCAGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLKGSWQ*DVQPGS
Trigger: AGACCCTGGCTGCACATCCCATTGCCAACTTCCCTT...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCACCCCTGGGTGGCCCTaGGCCAATACAGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRTPGWP*ANTASK
Trigger: CTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGT...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCCATCCCCCAAGGCTCTaGCTGCGGCCATTGCCACCT +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASHPPRL*LRPLPP
Trigger: AGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATG...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATKGQKL*SRQGTQ
Trigger: CTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTT...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKKGQKL*SRQGTQ
Trigger: CTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGCGTCACAGAGGGGCTaGTCAGGATGGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYASQRG*SGWHRA
Trigger: TGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCTGCTCCACTCCAGATaGCATCTAGCACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGLLHSR*HLAHGC
Trigger: GCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCATTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPFRATW*PKGSLI
Trigger: GATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAA...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTATGCCCGCCTCCGCTTaGCCACCGCACCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAMPASA*PPHPAA
Trigger: AGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCAT...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGAGGGGGCTGAGCAGTaGCAGCAGAAGGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVEGAEQ*QQKGRL
Trigger: GAGGCGGCCCTTCTGCTGCCACTGCTCAGCCCCCTC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGCCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCAAGCCTCTTTCAATGCTaGCAGCGCCCGGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: KPQSSSMEFNARLRLATASLFQC*QRPAEI
Trigger: TATTTCCGCCGGGCGCTGTCAGCATTGAAAGAGGCT...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp AGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACGCGGTTTCAAGGGACTaGATCCCAACAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLSLQVWSSMPASAWPPHAVSRD*IPTVPA
Trigger: TGCAGGAACTGTTGGGATTCAGTCCCTTGAAACCGC...GTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATGGACCCCGCATCGGTaGCAGGCCACAGTGCGCAAG +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVWTPHR*QATVRK
Trigger: CTTGCGCACTGTGGCCTGTCACCGATGCGGGGTCCA...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGTCCCTCCTAACACCTaGAGCAGAGTTCTGACCACG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEVPPNT*SRVLTT
Trigger: CGTGGTCAGAACTCTGCTTCAGGTGTTAGGAGGGAC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGGCTGGCTTACATTCCTaGGCTGGGGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPAGLHS*AGVFCA
Trigger: AGCACAGAAGACCCCAGCTCAGGAATGTAAGCCAGC...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCTGGCTTACATTCCTaGGCTGGGGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATAGLHS*AGVFCA
Trigger: AGCACAGAAGACCCCAGCTCAGGAATGTAAGCCAGC...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGGGACTGCCATCTACTaGGGAACCGCGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYGTAIY*GTASTQ
Trigger: CTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR TCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTTCCCCACTGTCCTCTaGTCCCCTCGTGACAGAACC +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYFPTVL*SPRDRT
Trigger: GGTTCTGTCACGAGGGGATCAGAGGACAGTGGGGAA...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTGGTCTGACCCAGTGCTaGTGGAGATTAGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGGLTQC*WRLVVG
Trigger: ACCCACCACTAATCTCCATCAGCACTGGGTCAGACC...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGCCATCCGGAAAGGCCTaGCAGCTGCCACCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKPSGKA*QLPPAR
Trigger: CCTGGCGGGTGGCAGCTGTCAGGCCTTTCCGGATGG...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCGCGACCTGTCCGGCTaGAAAAGCTTCCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQRDLSG*KSFLNC
Trigger: GCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCG...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCCCCGCGCCCCCGTTTaGCACCAGCTGGGAACCGGC +
Preference number: 4 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKPRAPV*HQLGTG
Trigger: GCCGGTTCCCAGCTGGTGGCAAACGGGGGCGCGGGG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGGGCTCAGGTGCGGGTaGGAATCTGGAGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQGLRCG*ESGAGS
Trigger: GGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCC...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGCCTGCAGCATCTCACTaGCAGTCCTGTTCGTGGACA +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPPAASH*QSCSWT
Trigger: TGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGG...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGAACACCAGCAGGACCTaGTCCAGGAGTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKNTSRT*SRSLEL
Trigger: GAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCATGCCACCTGGTGCTCTaGAGGCACTGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSCHLVL*RHCPLL
Trigger: GAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCA...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTCCCCAAGGCTCTGGCTaGGGCCATTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAPQGSG*GHCHLV
Trigger: CACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGG...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGTGTCCCTTTAGGTTCTaGAGCACACGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGCPFRF*STRRRS
Trigger: GCTGCGCCGCCGTGTGCTGCAGAACCTAAAGGGACA...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTTGTCCCTTTAGGTTCTaGAGCACACGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASCPFRF*STRRRS
Trigger: GCTGCGCCGCCGTGTGCTGCAGAACCTAAAGGGACA...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCATCTAGCACACGGCTaGCATGGCGACTACAGGCCA +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYHLAHG*HGDYRP
Trigger: TGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCTTGGCCACCGCACCCTaGTGCTGTTCCCAAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGLATAP*CCSQAS
Trigger: AGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGCCAA...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGGACCTCCACACTGCTaGAAGGCCTGGGCCATATGT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYGPPHC*KAWAIC
Trigger: ACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGTCCTACAGAGTGGAGTaGTGTCATATGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQSYRVE*CHMAWD
Trigger: GTCCCAGGCCATATGACAGCACTCCACTCTGTAGGA...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCATGGGGCTGCTTCCAATaGCTGTCCTTTAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSWGCFQ*LSFRAF
Trigger: GAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCA...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCAGCATGGGATAAGACCTaGCCTTCTTGCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSAWDKT*PSCFLP
Trigger: TGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGC...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCGAAAGGCCTGACAGCTaGCACCCGCCAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGERPDS*HPPGAA
Trigger: AGCAGCTCCTGGCGGGTGGCAGCTGTCAGGCCTTTC...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTCCACCCGCCCCCACCTaGACTCCATGGTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAPPAPT*TPWSLP
Trigger: AGGGAGAGACCATGGAGTGCAGGTGGGGGCGGGTGG...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCACTTCCCCACACTCTaGCCCGGGTTCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYHFPTL*PGFPFP
Trigger: AGGAAAAGGGAACCCGGGGCAGAGTGTGGGGAAGTG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCGCTTGGGCTCAAGCCTaGAGGGGAAATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLAWAQA*RGNATG
Trigger: GCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGC...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGTGCGGGTGCGAATCTaGAGCCGGCTCCGAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSVRVRI*SRLRAP
Trigger: GGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCAC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCCCTCCAGGGTCTCCGTaGGACCATCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRPPGSP*DHPFHP
Trigger: AGGATGGAAAGGATGGTCCCACGGAGACCCTGGAGG...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLEALES*GLQHQQ
Trigger: CTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTC...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGEALES*GLQHQQ
Trigger: CTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTC...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLEALES*GLQHQQ
Trigger: CTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTTCCTCAAAGAGGCTCTaGAGTCTTGGGGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGSSKRL*SLGGSN
Trigger: GTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGA...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGTCCTCAAAGAGGCTCTaGAGTCTTGGGGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPSSKRL*SLGGSN
Trigger: GTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGA...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCACCCCTGGGTGGCCCTaGGCCAATACAGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGTPGWP*ANTASK
Trigger: CTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGT...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGRAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGCGGCCATTGCCACCTaGTGCTCTGCAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSAAIAT*CSAGTA
Trigger: GGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRKGQKL*SRQGTQ
Trigger: CTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTT...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAGGGGCTGGTCAGGATaGCATCGAGCACATGAGAGC +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYRGWSG*HRAHES
Trigger: GCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAATGCCCGCCTCCGCTTaGCCACCGCACCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKMPASA*PPHPAA
Trigger: AGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCAT...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCATGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTTGCTGTCATATGGCCTaGGACGGGAGAGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPCCHMA*DGRGPS
Trigger: GCTTGGGCCTCTCCCGTCCCAGGCCATATGACAGCA...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTCAGGGGAAATGCAACTaGCCAGGTCACAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVQGKCN*PGHRAI
Trigger: GATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTG...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCAGGGGAAATGCAACTaGCCAGGTCACAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGQGKCN*PGHRAI
Trigger: GATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR CAA 72 bp TGGACCTCCACACTGCTGCAAGGCCTGGGCCATATGTaGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: WTSTLLQGLGHM*LGISSTLRHAV
Trigger: CACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCCTTCTGTGCTTCAGATaGTTGGGAACCACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRLLCFR*LGTTGP
Trigger: AGGCCCCGTGGTTCCCAATCATCTGAAGCACAGAAG...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGGGACTGCCATCTACTaGGGAACCGCGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLGTAIY*GTASTQ
Trigger: CTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTGGGACTGCCATCTACTaGGGAACCGCGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLGTAIY*GTASTQ
Trigger: CTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCC...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTGGGACTGCCATCTACTaGGGAACCGCGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPGTAIY*GTASTQ
Trigger: CTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCC...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR TCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGATGGCATCGAGCACATaGGAGCCAGCGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGMASST*EPAGLW
Trigger: CCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCAT...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGAGGATCTACTGCACTaGCAAGGGTGTCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEEDLLH*QGCPTE
Trigger: CTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGGGTGGGTGTCTGGTATaGGGATCTACTGCACTGACA +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQGGCLV*GSTALT
Trigger: TGTCAGTGCAGTAGATCCTCATACCAGACACCCACC...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACACCTTTCCGTGTCTGTaGTCACAAGCGGACCATCCG +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYTFPCL*SQADHP
Trigger: CGGATGGTCCGCTTGTGATCACAGACACGGAAAGGT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGAGCTCTGAACCCCAGTaGCTTACTCAGGTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQSSEPQ*LTQVTA
Trigger: AGCAGTCACCTGAGTAAGTCACTGGGGTTCAGAGCT...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTGCCAGAGTCCAGGCTTaGCTCATTCCCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPARVQA*LIPTLS
Trigger: GGACAAGGTGGGAATGAGTCAAGCCTGGACTCTGGC...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTGGCAGCTCTGGAAAATaGAGCCAGAGCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIGSSGK*SQSSEP
Trigger: TGGCTCACTGCTCTGGCTTCATTTTCCAGAGCTGCC...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCGACGTCGCCAAGCGTaGGCCTTATCCAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYRRRQA*ALSRQS
Trigger: ACTTTGTCTGGATAAGGCGCACGCTTGGCGACGTCG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGCGCGACCTGTCCGGCTaGAAAAGCTTCCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: ALPHQHPVPDPKPQSSSMRDLSG*KSFLNC
Trigger: GCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCG...CATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCCCTGCAGCATCTCACTaGCAGTCCTGTTCGTGGACA +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFPAASH*QSCSWT
Trigger: TGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGG...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCAAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACT +
Preference number: 4 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPSQSQH*RDERKT
Trigger: AGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCT...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAACACCAGCAGGACCTaGTCCAGGAGTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYNTSRT*SRSLEL
Trigger: GAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTAGCTGCCCCTGCAAGTaGTCCTCAAAGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PTAEWSANPGARGGWNCSSCPCK*SSKRLW
Trigger: CCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCT...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTAGCTGCCCCTGCAAGTaGTCCTCAAAGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLSCPCK*SSKRLW
Trigger: CCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCT...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCAGCTGCCCCTGCAAGTaGTCCTCAAAGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLSCPCK*SSKRLW
Trigger: CCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCT...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGCCAGGGTCTGCAGCTaGCCCTGCAAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGARVCS*PCKCSS
Trigger: TGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTGTTGGCAATGGGATGTaGAGCCAGGGTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASVGNGM*SQGLQL
Trigger: CAGCTGCAGACCCTGGCTGCACATCCCATTGCCAAC...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGCCACCTGGTGCTCTaGAGGCACTGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLCHLVL*RHCPLL
Trigger: GAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCA...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCCCCCAAGGCTCTGGCTaGGGCCATTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISPQGSG*GHCHLV
Trigger: CACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGG...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp ATCCCCTACAGTTGGATAGTCCCCATAATTCGTCCTCTTGCACCCACCTACCCCCATCTAGCACACGGCTaGCATGGCGACTACAGGCCA +
Preference number: 4 (lower is better)
Translates to: IPYSWIVPIIRPLAPTYPHLAHG*HGDYRP
Trigger: TGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATG...GGGGTAGGTGGGTGCAAGAGGACGAATTATGGGGACTATCCAACTGTAGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCCATCTAGCACACGGCTaGCATGGCGACTACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLHLAHG*HGDYRP
Trigger: TGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATG...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGATCAGCTCCTGGTTCTaGTCCCCAAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALPHQHPVPDPKPQSSSMISSWF*SPSSAA
Trigger: TGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGAT...CATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTTTCTGGCCTCCCACTTaGCCTGAAAGGCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVFWPPT*PERPRS
Trigger: TGATCTTGGCCTTTCAGGGCAAGTGGGAGGCCAGAA...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCCTTACCTGAAGAATaGTGTTCTTTCCTAGCCACC +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSPLPEE*CSFLAT
Trigger: GGTGGCTAGGAAAGAACAGCATTCTTCAGGTAAGGG...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCATCAAATTTCAGGACCTaGAGACAGTACAGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPSNFRT*RQYRLD
Trigger: ATCTAGCCTGTACTGTCTGCAGGTCCTGAAATTTGA...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTGGCCTATACTGGGGCTaGTTCCAATGCCTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVGLYWG*FQCLSF
Trigger: AAAGGACAGGCATTGGAAGCAGCCCCAGTATAGGCC...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGAAGACCTGCCCTTCTTaGTTCTTGCCATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQKTCPS*FLPLGR
Trigger: CCTGCCCAATGGCAAGAAGCAAGAAGGGCAGGTCTT...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAACACTTCCCCACACTCTaGCCCGGGTTCCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQHFPTL*PGFPFP
Trigger: AGGAAAAGGGAACCCGGGGCAGAGTGTGGGGAAGTG...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGCTTGGGCTCAAGCCTaGAGGGGAAATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLAWAQA*RGNATG
Trigger: GCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCAGGGAACCACGGGGCCTaGCTCTCTCAGACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTAGNHGA*LSQTPE
Trigger: TTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCC...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGTGTGCTTCAGATGATTaGGAACCACGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALPHQHPVPDPKPQSSSMCASDD*EPRGLA
Trigger: AGCCAGGCCCCGTGGTTCCCAATCATCTGAAGCACA...CATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTGTGCTTCAGATGATTaGGAACCACGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYCASDD*EPRGLA
Trigger: AGCCAGGCCCCGTGGTTCCCAATCATCTGAAGCACA...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTTACATTCCTGAGCTaGGGTCTTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLLTFLS*GLLCFR
Trigger: TCTGAAGCACAGAAGACCCCAGCTCAGGAATGTAAG...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACCCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGA +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYPAPGV*NSSDLG
Trigger: TCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGG...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAGGGAAGTTGGCAATaGGATGTGCAGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPKGSWQ*DVQPGS
Trigger: AGACCCTGGCTGCACATCCCATTGCCAACTTCCCTT...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAAGGGAAGTTGGCAATaGGATGTGCAGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGKGSWQ*DVQPGS
Trigger: AGACCCTGGCTGCACATCCCATTGCCAACTTCCCTT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: ALPHQHPVPDPKPQSSSMRAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...CATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACATCCCCCAAGGCTCTaGCTGCGGCCATTGCCACCT +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVHPPRL*LRPLPP
Trigger: AGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKKCSRC*SSRDPR
Trigger: CCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTAGGGGCTGGTCAGGATaGCATCGAGCACATGAGAGC +
Preference number: 4 (lower is better)
Translates to: PTAEWSANPGARGGWNCSRGWSG*HRAHES
Trigger: GCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCT...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCAGGGGCTGGTCAGGATaGCATCGAGCACATGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLRGWSG*HRAHES
Trigger: GCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCT...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTCTGCTCCACTCCAGATaGCATCTAGCACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTAEWSANPGARGGWNCSLLHSR*HLAHGC
Trigger: GCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAG...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGAGGGGGCTGAGCAGTaGCAGCAGAAGGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQEGAEQ*QQKGRL
Trigger: GAGGCGGCCCTTCTGCTGCCACTGCTCAGCCCCCTC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACCCTTCGTCATGCAGTaGAGGGGGCTGAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSPFVMQ*RGLSSG
Trigger: GCCACTGCTCAGCCCCCTCCACTGCATGACGAAGGG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTCTTGCTTCTTGCCATTaGGCAGGCATTGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPLASCH*AGIGDP
Trigger: AGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAG...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGCCAACTGATGGATGTTaGGCAGCTAAAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQPTDGC*AAKEGR
Trigger: CCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGG...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGATTCCCACCTTGTCCTaGGCTGAGATCCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKIPTLS*AEIPGL
Trigger: CAAACCTGGGATCTCAGCCCAGGACAAGGTGGGAAT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCTTTCATCCTTTTACATaGTTCCCATCTACCCTCACA +
Preference number: 4 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALFHPFT*FPSTLT
Trigger: TGTGAGGGTAGATGGGAACCATGTAAAAGGATGAAA...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTTGCAGCAGGCAGCTCTaGAAAATGAAGCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVCSRQL*KMKPEQ
Trigger: CTGCTCTGGCTTCATTTTCCAGAGCTGCCTGCTGCA...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGCCCTACAAGGATCCTTaGCAGGAAAGCAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQPYKDP*QESRDC
Trigger: ACAATCCCTGCTTTCCTGCCAAGGATCCTTGTAGGG...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCAGCCTCTTTCAATGCTaGCAGCGCCCGGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPASLFQC*QRPAEI
Trigger: TATTTCCGCCGGGCGCTGTCAGCATTGAAAGAGGCT...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTGTCCCTCCTAACACCTaGAGCAGAGTTCTGACCACG +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASAVPPNT*SRVLTT
Trigger: CGTGGTCAGAACTCTGCTTCAGGTGTTAGGAGGGAC...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCCTTCTGTGCTTCAGATaGTTGGGAACCACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLLLCFR*LGTTGP
Trigger: AGGCCCCGTGGTTCCCAATCATCTGAAGCACAGAAG...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGCTTCTGTGCTTCAGATaGTTGGGAACCACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGLLCFR*LGTTGP
Trigger: AGGCCCCGTGGTTCCCAATCATCTGAAGCACAGAAG...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCGCTGGCTTACATTCCTaGGCTGGGGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGAGLHS*AGVFCA
Trigger: AGCACAGAAGACCCCAGCTCAGGAATGTAAGCCAGC...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGAGGAGCTCAGGTCCTaGAGGCGATTCAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATEELRS*RRFKKV
Trigger: AACCTTTTTGAATCGCCTTCAGGACCTGAGCTCCTC...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGAGGAGCTCAGGTCCTaGAGGCGATTCAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEEELRS*RRFKKV
Trigger: AACCTTTTTGAATCGCCTTCAGGACCTGAGCTCCTC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAGCATTGCAGAGATaGGCGCAAAACTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVTALQR*AQNWGS
Trigger: ACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGT...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTACAGCATTGCAGAGATaGGCGCAAAACTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGTALQR*AQNWGS
Trigger: ACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR TCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCGCCTCCCACTTGCCCTaGAAGGCCAAGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGASHLP*KAKIKM
Trigger: CATCTTGATCTTGGCCTTTCAGGGCAAGTGGGAGGC...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCGGTCTGACCCAGTGCTaGTGGAGATTAGTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGGLTQC*WRLVVG
Trigger: ACCCACCACTAATCTCCATCAGCACTGGGTCAGACC...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGGAAGGGTGGACTTCGTaGGAACCTGGCTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGEGWTS*EPGLLS
Trigger: GGAAAGCAAGCCAGGTTCTCACGAAGTCCACCCTTC...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTAGTACCTCTCAGCTCTaGACCCCAGTGACTTACTCA +
Preference number: 4 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPSTSQL*TPVTYS
Trigger: TGAGTAAGTCACTGGGGTTCAGAGCTGAGAGGTACT...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCGGCAGCTCTGGAAAATaGAGCCAGAGCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGGSSGK*SQSSEP
Trigger: TGGCTCACTGCTCTGGCTTCATTTTCCAGAGCTGCC...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCAAAAGCTTCCTTAACTaGGGACGGACCTTCGACGTC +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATKSFLN*GRTFDV
Trigger: GACGTCGAAGGTCCGTCCGCAGTTAAGGAAGCTTTT...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTCGCGACCTGTCCGGCTaGAAAAGCTTCCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPRDLSG*KSFLNC
Trigger: GCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCG...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCACCCTGCCCCATGTGTaGTTCGCGACCTGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISTLPHV*FATCPA
Trigger: AGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTAACACCAGCAGGACCTaGTCCAGGAGTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLNTSRT*SRSLEL
Trigger: GAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTT...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTAACACCAGCAGGACCTaGTCCAGGAGTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASNTSRT*SRSLEL
Trigger: GAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTT...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCAACACCAGCAGGACCTaGTCCAGGAGTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLNTSRT*SRSLEL
Trigger: GAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTT...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTAGCTGCCCCTGCAAGTaGTCCTCAAAGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FRKVVKATFRATWWPKGSSCPCK*SSKRLW
Trigger: CCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCT...AGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGTGCAGCCAGGGTCTaGAGCTGCCCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLCAARV*SCPCKC
Trigger: GCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACA...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEASSKR*KGKLAM
Trigger: CATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTTGCCACCTGGTGCTCTaGAGGCACTGCCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCCHLVL*RHCPLL
Trigger: GAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCA...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCTCTGGCTGCGGCCATTaGCACCTGGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISSGCGH*HLVLCR
Trigger: CCTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGA...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGCCGGGCCCTCAAGGCTaGTCCACTCCAGATGGCATC +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKPGPQG*STPDGI
Trigger: GATGCCATCTGGAGTGGAGCAGCCTTGAGGGCCCGG...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGCCGGGCCCTCAAGGCTaGTCCACTCCAGATGGCATC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLPGPQG*STPDGI
Trigger: GATGCCATCTGGAGTGGAGCAGCCTTGAGGGCCCGG...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCATCAGCTCCTGGTTCTaGTCCCCAAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASISSWF*SPSSAA
Trigger: TGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGAT...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGATCAGCTCCTGGTTCTaGTCCCCAAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGISSWF*SPSSAA
Trigger: TGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGAT...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCATCAGCTCCTGGTTCTaGTCCCCAAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLISSWF*SPSSAA
Trigger: TGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGAT...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGCCACCGCACCCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCATAPC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGGTGCGGTGGC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTAAGTATGGAGTTCAATaGCCGCCTCCGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLKYGVQ*PPPLGH
Trigger: GTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTT...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAAAAGTATGGAGTTCAATaGCCGCCTCCGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQKYGVQ*PPPLGH
Trigger: GTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTT...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTCTAATCCCCTACCAATaGCTCCTGTCCCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPLIPYQ*LLSLNS
Trigger: GGAGTTTAGGGACAGGAGGCATTGGTAGGGGATTAG...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGGGGGCTCTGAGCTTCTaGCCCCAGAATCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGGALSF*PQNHSN
Trigger: GTTGGAATGATTCTGGGGGCAGAAGCTCAGAGCCCC...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCCCTCCCCTTGGACTTTaGCCTTCTTACTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGPPLGL*PSYWPG
Trigger: GCCTGGCCAGTAAGAAGGGCAAAGTCCAAGGGGAGG...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCCGTTTGCCACCAGCTaGGAACCGGCGCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQPFATS*EPAPHL
Trigger: AAGGTGGGGCGCCGGTTCCCAGCTGGTGGCAAACGG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCTGCCAGTCCTGTTCGTaGACAAAGCTAGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASCQSCS*TKLGPE
Trigger: CTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCA...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCTGCCAGTCCTGTTCGTaGACAAAGCTAGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGCQSCS*TKLGPE
Trigger: CTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCA...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCCCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGA +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASPAPGV*NSSDLG
Trigger: TCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGG...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTCCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGA +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLPAPGV*NSSDLG
Trigger: TCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGG...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAG +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEEALES*GLQHQQ
Trigger: CTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTC...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTTCCTCAAAGAGGCTCTaGAGTCTTGGGGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLSSKRL*SLGGSN
Trigger: GTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGA...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTCCTCAAAGAGGCTCTaGAGTCTTGGGGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLSSKRL*SLGGSN
Trigger: GTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGA...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGTCCTCAAAGAGGCTCTaGAGTCTTGGGGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGSSKRL*SLGGSN
Trigger: GTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGA...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAAGGGAAGTTGGCAATaGGATGTGCAGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYKGSWQ*DVQPGS
Trigger: AGACCCTGGCTGCACATCCCATTGCCAACTTCCCTT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: PTAEWSANPGARGGWNCSRAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: HPVPDPKPQSSSMEFNARRAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...GCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPAEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTGCGGCCATTGCCACCTaGTGCTCTGCAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFAAIAT*CSAGTA
Trigger: GGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGC...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGCGGCCATTGCCACCTaGTGCTCTGCAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTAAIAT*CSAGTA
Trigger: GGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGC...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTGTACAAGACCAGGAGTaGAGAAGTGCAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVVQDQE*RSAADA
Trigger: AGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTAC...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGCGTCACAGAGGGGCTaGTCAGGATGGCATCGAGCA +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEASQRG*SGWHRA
Trigger: TGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGC...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGAGCACACGGCTGCCATaGCGACTACAGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLSTRLP*RLQARA
Trigger: GGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCT...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAGCACACGGCTGCCATaGCGACTACAGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISSTRLP*RLQARA
Trigger: GGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCTCTCTTATCAGCTCCTaGTTCTGCTCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATSLISS*FCSPSS
Trigger: TGAGCTTGGGGAGCAGAACCAGGAGCTGATAAGAGA...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTTCTCTTATCAGCTCCTaGTTCTGCTCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVSLISS*FCSPSS
Trigger: TGAGCTTGGGGAGCAGAACCAGGAGCTGATAAGAGA...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGTTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEFRATW*PKGSLI
Trigger: GATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAA...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCAGTCTTCAAGTATaGAGTTCAATGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQLSLQV*SSMPAS
Trigger: GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAG...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCATTCAGAAGCTAGTATaGAAAGGTGATTTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALIQKLV*KGDLCD
Trigger: GTCACACAAATCACCTTTCCATACTAGCTTCTGAAT...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCGGGGCTCCACAACAGTaGCAACTTGTGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLGAPQQ*QLVMME
Trigger: CTCCATCATCACAAGTTGCCACTGTTGTGGAGCCCC...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCTATAAGCTCGGAGTTTaGACGGAGGGTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLYKLGV*TEGLDL
Trigger: GAGGTCCAGACCCTCCGTCCAAACTCCGAGCTTATA...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTTTCCTTCCGGGCCTTTaGGCAAGGGACAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLFLPGL*ARDRSC
Trigger: ACAGCTTCTGTCCCTTGCCCAAAGGCCCGGAAGGAA...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTTCCTTCCGGGCCTTTaGGCAAGGGACAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASAFLPGL*ARDRSC
Trigger: ACAGCTTCTGTCCCTTGCCCAAAGGCCCGGAAGGAA...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
3UTR CAA 72 bp GGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTaGACGTGTACAAGCAAAACCCTCGAGACCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GPSTARTSPDSP*TCTSKTLETSL
Trigger: CAAAGAGGTCTCGAGGGTTTTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTGCGGTTTCAAGGGACTaGATCCCAACAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASAAVSRD*IPTVPA
Trigger: TGCAGGAACTGTTGGGATTCAGTCCCTTGAAACCGC...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGGCCACTTGCCGGGATaGGGGCTCTGCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCGHLPG*GLCTVE
Trigger: TTCCACTGTGCAGAGCCCTCATCCCGGCAAGTGGCC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGATCTTGATCCCAGCCTaGCTGCTGCTACATCTAATC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEILIPA*LLLHLI
Trigger: GATTAGATGTAGCAGCAGTCAGGCTGGGATCAAGAT...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGACGGGCTCTACTCTATaGGTTGTGACTTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVETGSTL*VVTFKD
Trigger: GTCCTTGAAAGTCACAACTCATAGAGTAGAGCCCGT...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGGGCTCTACTCTATaGGTTGTGACTTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVTGSTL*VVTFKD
Trigger: GTCCTTGAAAGTCACAACTCATAGAGTAGAGCCCGT...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGACCTCTTTGGCAGCCTaGATGTCAAAGCCACATTCT +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKTSLAA*MSKPHS
Trigger: AGAATGTGGCTTTGACATTCAGGCTGCCAAAGAGGT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGAGGATCTACTGCACTaGCAAGGGTGTCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLEDLLH*QGCPTE
Trigger: CTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCTC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACCAGCTGCTGGAGGATaGCACGTGCCTGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVPAAGG*HVPDGV
Trigger: AACACCATCAGGCACGTGTCATCCTCCAGCAGCTGG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp ATCCCCTACAGTTGGATAGTCCCCATAATTCGTCCTCTTGCACCCACCTACCCCATTCCAAACCAGAAGTaGCTTGGAGGGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: IPYSWIVPIIRPLAPTYPIPNQK*LGGEQG
Trigger: CCCTTGCTCCCCTCCAAGTCACTTCTGGTTTGGAAT...GGGGTAGGTGGGTGCAAGAGGACGAATTATGGGGACTATCCAACTGTAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCCTCCTCGCCCCTTCTTaGCTTTTCTTCTCAACTACC +
Preference number: 4 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLLLAPS*LFFSTT
Trigger: GGTAGTTGAGAAGAAAAGTCAAGAAGGGGCGAGGAG...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGCAGCTTCTCAGAGCCTaGGAGCCAGAAACCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLQLLRA*EPETVP
Trigger: GGGGACGGTTTCTGGCTCTCAGGCTCTGAGAAGCTG...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CATATGGCCTGGGACGGGAGAGGCCCAAGCACAGCAAGGACATCGCCCGATTCATTTTGGGCAACAACCTaGATACCTTTTCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HMAWDGRGPSTARTSPDSFWATT*IPFQGS
Trigger: AGAGCCTTGAAAAGGTATTCAGGTTGTTGCCCAAAA...TGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCTCTCCCGTCCCAGGCCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVVCSCP*KCSSKR
Trigger: CCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGAC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSVCSCP*KCSSKR
Trigger: CCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGAC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGCCAGGGTCTGCAGCTaGCCCTGCAAGTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCARVCS*PCKCSS
Trigger: TGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCATGTGCAGCCAGGGTCTaGAGCTGCCCCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSCAARV*SCPCKC
Trigger: GCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACA...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFASSKR*KGKLAM
Trigger: CATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGC...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CATAACGCCTCACATCCCAAGTCTATACCCTTACCTGAAGAATGCTGTTCTTTCGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: HNASHPKSIPLPEECCSFVLCRH*PLLLRQ
Trigger: CTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCAC...GAAAGAACAGCATTCTTCAGGTAAGGGTATAGACTTGGGATGTGAGGCGTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCCCCAAGGCTCTGGCTaGGGCCATTGCCACCTGGTG +
Preference number: 4 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKPQGSG*GHCHLV
Trigger: CACCAGGTGGCAATGGCCGCAGCCAGAGCCTTGGGG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGACATCTAGCACACGGCTaGCATGGCGACTACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGHLAHG*HGDYRP
Trigger: TGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATG...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCATCAGCTCCTGGTTCTaGTCCCCAAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGISSWF*SPSSAA
Trigger: TGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGAT...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGGACCTCCACACTGCTaGAAGGCCTGGGCCATATGT +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGGPPHC*KAWAIC
Trigger: ACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGTTGGACCTCCACACTaGTGCAAGGCCTGGGCCATA +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSVGPPH*CKAWAI
Trigger: TATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAAC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGATTTCCTCTTGTCTCTaGCATTCAGGGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKISSCL*HSGSSF
Trigger: GAAGGAGCTCCCTGAATGGCAGAGACAAGAGGAAAT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAACTGGAGGATGACACGTaGCTGATGGTGTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQLEDDT*LMVLQS
Trigger: AGACTGCAACACCATCAGGCACGTGTCATCCTCCAG...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTAAGACCTGCCCTTCTTaGTTCTTGCCATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTAEWSANPGARGGWNCSKTCPS*FLPLGR
Trigger: CCTGCCCAATGGCAAGAAGCAAGAAGGGCAGGTCTT...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTCCTCCCCTTGGACTTTaGCCTTCTTACTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAPPLGL*PSYWPG
Trigger: GCCTGGCCAGTAAGAAGGGCAAAGTCCAAGGGGAGG...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGATCAAAGGACATCCCTaGCCCATTCACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEIKGHP*PIHISV
Trigger: GACAGAGATGTGAATGGGGCAGGGATGTCCTTTGAT...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTTCCAACCGACCCACTaGAAAGACCTGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLFQPTH*KDLLLF
Trigger: GAACAGCAGCAGGTCTTTGCAGTGGGTCGGTTGGAA...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGCGCCCCACCTTGTGTaGAGAGCGCGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVAPHLV*RARTLP
Trigger: GGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGACCTCCAGGGTCTCCGTaGGACCATCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGPPGSP*DHPFHP
Trigger: AGGATGGAAAGGATGGTCCCACGGAGACCCTGGAGG...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATGTGCTTCAGATGATTaGGAACCACGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTACASDD*EPRGLA
Trigger: AGCCAGGCCCCGTGGTTCCCAATCATCTGAAGCACA...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTTGTGCTTCAGATGATTaGGAACCACGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FRKVVKATFRATWWPKGSCASDD*EPRGLA
Trigger: AGCCAGGCCCCGTGGTTCCCAATCATCTGAAGCACA...AGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCTTACATTCCTGAGCTaGGGTCTTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVELTFLS*GLLCFR
Trigger: TCTGAAGCACAGAAGACCCCAGCTCAGGAATGTAAG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCACCCCTGGGTGGCCCTaGGCCAATACAGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISTPGWP*ANTASK
Trigger: CTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCATCCCCCAAGGCTCTaGCTGCGGCCATTGCCACCT +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCHPPRL*LRPLPP
Trigger: AGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCATCCCCCAAGGCTCTaGCTGCGGCCATTGCCACCT +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQHPPRL*LRPLPP
Trigger: AGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: SQIQSLSLQVWSSMPASAKCSRC*SSRDPR
Trigger: CCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTT...AGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCGTACAAGACCAGGAGTaGAGAAGTGCAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFVQDQE*RSAADA
Trigger: AGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTAC...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSKGQKL*SRQGTQ
Trigger: CTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTT...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: PKPQSSSMEFNARLRLATKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp ATCCCCTACAGTTGGATAGTCCCCATAATTCGTCCTCTTGCACCCACCTACCCCTATAAGCTCGGAGTTTaGACGGAGGGTCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: IPYSWIVPIIRPLAPTYPYKLGV*TEGLDL
Trigger: GAGGTCCAGACCCTCCGTCCAAACTCCGAGCTTATA...GGGGTAGGTGGGTGCAAGAGGACGAATTATGGGGACTATCCAACTGTAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACTCCCCACTCCACAGTaGGCTTGTCAAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVLPTPQ*ACQAPE
Trigger: CTCAGGAGCTTGACAAGCCCACTGTGGAGTGGGGAG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCAGGGTTCAAGGTATTTaGTTCAGGGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGRVQGI*FRARAS
Trigger: ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCT...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 72 bp CTTAACCCTGATCCTGGGGACCAGGTGCAGGAGGAGTaGTGGAATTGTCAAGGATGTCACACAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LNPDPGDQVQEE*WNCQGCHTVDR
Trigger: TCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGCACCTGGTCCCCAGGATCAGGGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 72 bp TCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTaGATGCCATCAAAGGACATCCCTGCCCCATTCACA +
Preference number: 4 (lower is better)
Translates to: SELGHSAPEAKV*MPSKDIPAPFT
Trigger: TGTGAATGGGGCAGGGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCAGCGGTTTCAAGGGACTaGATCCCAACAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTAAVSRD*IPTVPA
Trigger: TGCAGGAACTGTTGGGATTCAGTCCCTTGAAACCGC...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGCTGGCTTACATTCCTaGGCTGGGGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVAGLHS*AGVFCA
Trigger: AGCACAGAAGACCCCAGCTCAGGAATGTAAGCCAGC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAAGAGGAGCTCAGGTCCTaGAGGCGATTCAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQEELRS*RRFKKV
Trigger: AACCTTTTTGAATCGCCTTCAGGACCTGAGCTCCTC...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCGAGGAGCTCAGGTCCTaGAGGCGATTCAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPAEELRS*RRFKKV
Trigger: AACCTTTTTGAATCGCCTTCAGGACCTGAGCTCCTC...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTACAGCATTGCAGAGATaGGCGCAAAACTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLTALQR*AQNWGS
Trigger: ACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGT...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp CCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTACAGCATTGCAGAGATaGGCGCAAAACTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PRSKASVFKYGVQCPPPLTALQR*AQNWGS
Trigger: ACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGT...AAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYSLELV*SRRNSS
Trigger: ACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGCCCCCACCAGGGCAATaGCTACCCCTGGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVPPPGQ*LPLGGP
Trigger: AGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGG...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR TCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAATGGCATCGAGCACATaGGAGCCAGCGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQMASST*EPAGLW
Trigger: CCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCAT...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAACCAGCTGCTGGAGGATaGCACGTGCCTGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQPAAGG*HVPDGV
Trigger: AACACCATCAGGCACGTGTCATCCTCCAGCAGCTGG...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGACCTTTCCGTGTCTGTaGTCACAAGCGGACCATCCG +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKETFPCL*SQADHP
Trigger: CGGATGGTCCGCTTGTGATCACAGACACGGAAAGGT...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp ATCCCCTACAGTTGGATAGTCCCCATAATTCGTCCTCTTGCACCCACCTACCCCCTCCTCGCCCCTTCTTaGCTTTTCTTCTCAACTACC +
Preference number: 4 (lower is better)
Translates to: IPYSWIVPIIRPLAPTYPLLAPS*LFFSTT
Trigger: GGTAGTTGAGAAGAAAAGTCAAGAAGGGGCGAGGAG...GGGGTAGGTGGGTGCAAGAGGACGAATTATGGGGACTATCCAACTGTAGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGCCAGAGTCCAGGCTTaGCTCATTCCCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLARVQA*LIPTLS
Trigger: GGACAAGGTGGGAATGAGTCAAGCCTGGACTCTGGC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGCAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCC +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEQKLKS*CHQRTS
Trigger: GGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTG...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCC +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGQKLKS*CHQRTS
Trigger: GGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCAAAAGCTTCCTTAACTaGGGACGGACCTTCGACGTC +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASKSFLN*GRTFDV
Trigger: GACGTCGAAGGTCCGTCCGCAGTTAAGGAAGCTTTT...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTAATCCCAACAGTTCCTaGAGCATCTCACTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPNPNSS*SISLPV
Trigger: GACTGGCAGTGAGATGCTGCAGGAACTGTTGGGATT...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTAATCCCAACAGTTCCTaGAGCATCTCACTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLNPNSS*SISLPV
Trigger: GACTGGCAGTGAGATGCTGCAGGAACTGTTGGGATT...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACT +
Preference number: 4 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGSQSQH*RDERKT
Trigger: AGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGTTGGCAATGGGATGTaGAGCCAGGGTCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLVGNGM*SQGLQL
Trigger: CAGCTGCAGACCCTGGCTGCACATCCCATTGCCAAC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGASSKR*KGKLAM
Trigger: CATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGC...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGASSKR*KGKLAM
Trigger: CATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGC...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLASSKR*KGKLAM
Trigger: CATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGGTAGGCCCCAACTCTaGGACAGGCCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVGRPQL*DRPPPG
Trigger: CCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCATGTCCCTTTAGGTTCTaGAGCACACGGCGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSCPFRF*STRRRS
Trigger: GCTGCGCCGCCGTGTGCTGCAGAACCTAAAGGGACA...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCCTAATCCCCTACCAATaGCTCCTGTCCCTAAACTCC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLLIPYQ*LLSLNS
Trigger: GGAGTTTAGGGACAGGAGGCATTGGTAGGGGATTAG...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACGTTGGACCTCCACACTaGTGCAAGGCCTGGGCCATA +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANVGPPH*CKAWAI
Trigger: TATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCCAAC...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTCATTTTCCAAAGCCCTaGCATGCTGCCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPHFPKP*HAAIPL
Trigger: AAGTGGGATGGCAGCATGGCAGGGCTTTGGAAAATG...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACATCAAAGGACATCCCTaGCCCATTCACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYIKGHP*PIHISV
Trigger: GACAGAGATGTGAATGGGGCAGGGATGTCCTTTGAT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCGCTTGGGCTCAAGCCTaGAGGGGAAATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISAWAQA*RGNATG
Trigger: GCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGC...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGCGCCCCACCTTGTGTaGAGAGCGCGGACCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGAPHLV*RARTLP
Trigger: GGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGC...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTTGCCAGTCCTGTTCGTaGACAAAGCTAGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAACQSCS*TKLGPE
Trigger: CTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCA...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGGGAACCACGGGGCCTaGCTCTCTCAGACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQGNHGA*LSQTPE
Trigger: TTCTGGAGTCTGAGAGAGCCAGGCCCCGTGGTTCCC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGCCTGGGCCATATGTTGCTGGGAATTTCCTCCACCCTTCGTCATGCAGTGGAGGACTTCAAAATCAGCTaGCTTACATTCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGHMLLGISSTLRHAVEDFKIS*LTFLSW
Trigger: CCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTC...CTCCACTGCATGACGAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAACCCCTGGGTGGCCCTaGGCCAATACAGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSTPGWP*ANTASK
Trigger: CTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKERAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCCATCCCCCAAGGCTCTaGCTGCGGCCATTGCCACCT +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTHPPRL*LRPLPP
Trigger: AGGTGGCAATGGCCGCAGCCAGAGCCTTGGGGGATG...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGAAAGGGTCTCTTGTACAAGACCAGGAGTaGAGAAGTGCAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: RKVVKATFRATWWPKGSLVQDQE*RSAADA
Trigger: AGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTAC...AAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANKGQKL*SRQGTQ
Trigger: CTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTT...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGAGCCAGCGGGACTTTaGGCAAGGGACAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQEPAGL*ARDRSC
Trigger: ACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTC...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGAGCCAGCGGGACTTTaGGCAAGGGACAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLEPAGL*ARDRSC
Trigger: ACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCCTGCTCCACTCCAGATaGCATCTAGCACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISLLHSR*HLAHGC
Trigger: GCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAG...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPAFRATW*PKGSLI
Trigger: GATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAA...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLFRATW*PKGSLI
Trigger: GATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAA...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCTCAGTCTTCAAGTATaGAGTTCAATGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGLSLQV*SSMPAS
Trigger: GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAG...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CCATTTTGCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: PFCPPPSTPSPRSKASVFKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...GAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGCAAAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGTGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTTGCTGTCATATGGCCTaGGACGGGAGAGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFCCHMA*DGRGPS
Trigger: GCTTGGGCCTCTCCCGTCCCAGGCCATATGACAGCA...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAAGGATGTCACACAGTaGACAGAAAGTCCAAGCGAG +
Preference number: 4 (lower is better)
Translates to: AQACRGNATGQVTGQSSYKDVTQ*TESPSE
Trigger: CTCGCTTGGACTTTCTGTCCACTGTGTGACATCCTT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCGTAAGAGGCCTATACTaGGGCTGCTTCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGVRGLY*GCFQCL
Trigger: CAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTAC...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGATGGTGTTGCAGTCTaGTCAGAGCTGGAGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVDGVAV*SELEPY
Trigger: GTAGGGCTCCAGCTCTGACCAGACTGCAACACCATC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCCCAACTGATGGATGTTaGGCAGCTAAAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGPTDGC*AAKEGR
Trigger: CCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGG...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTGCCGGAAAGTCAAAGTaGGACATCGACCAATGTCTA +
Preference number: 4 (lower is better)
Translates to: QWTESPSEGGSDPVLMEIAGKSK*DIDQCL
Trigger: TAGACATTGGTCGATGTCCCACTTTGACTTTCCGGC...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGGGGCCTAATGAGCTCTaGTCAATTTGTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQGPNEL*SICSFS
Trigger: GGAAAATGAACAAATTGACCAGAGCTCATTAGGCCC...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACGTCCCTCCTAACACCTaGAGCAGAGTTCTGACCACG +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANVPPNT*SRVLTT
Trigger: CGTGGTCAGAACTCTGCTTCAGGTGTTAGGAGGGAC...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGCTGGCTTACATTCCTaGGCTGGGGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLAGLHS*AGVFCA
Trigger: AGCACAGAAGACCCCAGCTCAGGAATGTAAGCCAGC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGGGACTGCCATCTACTaGGGAACCGCGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQGTAIY*GTASTQ
Trigger: CTGAGTACTCGCGGTTCCTCAGTAGATGGCAGTCCC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASSLELV*SRRNSS
Trigger: ACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACT...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGSLELV*SRRNSS
Trigger: ACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACT...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR TCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTATGGCATCGAGCACATaGGAGCCAGCGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFMASST*EPAGLW
Trigger: CCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCAT...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTCTCTGACTTTACCTTaGGATCTGTCTTCATACCCT +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKSLTLP*DLSSYP
Trigger: AGGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCCTACTAAGGGGCTCTaGGCTTCTGCCCCCAGAATC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCPTKGL*ASAPRI
Trigger: GATTCTGGGGGCAGAAGCTCAGAGCCCCTTAGTAGG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGGTGGGTGTCTGGTATaGGGATCTACTGCACTGACA +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGGGCLV*GSTALT
Trigger: TGTCAGTGCAGTAGATCCTCATACCAGACACCCACC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGCCCAGAAGTTCCAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGATCAAGTTCAAATTCTaGTTCTGCCACTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SPEVPGKELSGPPWSTSQIKFKF*FCHFLP
Trigger: AGGCAGGAAGTGGCAGAATCAGAATTTGAACTTGAT...CTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTGGAACTTCTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTTCATTTTCCACCGAGTaGGCTTTTCTATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PTAEWSANPGARGGWNCSSFSTE*AFLWEQ
Trigger: CTGCTCCCATAGAAAAGCTCACTCGGTGGAAAATGA...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGCCATCCGGAAAGGCCTaGCAGCTGCCACCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGPSGKA*QLPPAR
Trigger: CCTGGCGGGTGGCAGCTGTCAGGCCTTTCCGGATGG...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAAGCTCTGAACCCCAGTaGCTTACTCAGGTGACTGCT +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGSSEPQ*LTQVTA
Trigger: AGCAGTCACCTGAGTAAGTCACTGGGGTTCAGAGCT...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCAGTACCTCTCAGCTCTaGACCCCAGTGACTTACTCA +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGSTSQL*TPVTYS
Trigger: TGAGTAAGTCACTGGGGTTCAGAGCTGAGAGGTACT...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTTTTTGGGCAACAACCTaGATACCTTTTCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPFWATT*IPFQGS
Trigger: AGAGCCTTGAAAAGGTATTCAGGTTGTTGCCCAAAA...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGCTTCCGGGCTCAGGTaGGGGTGCGAATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVASGLR*GCESGA
Trigger: GGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR GCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAACCTGCAGCATCTCACTaGCAGTCCTGTTCGTGGACA +
Preference number: 4 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKPAASH*QSCSWT
Trigger: TGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGG...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQVCSCP*KCSSKR
Trigger: CCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGAC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGTTCTGGCCTCCCACTTaGCCTGAAAGGCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEFWPPT*PERPRS
Trigger: TGATCTTGGCCTTTCAGGGCAAGTGGGAGGCCAGAA...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGGACCTCCACACTGCTaGAAGGCCTGGGCCATATGT +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSGPPHC*KAWAIC
Trigger: ACATATGGCCCAGGCCTTGCAGCAGTGTGGAGGTCC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTCATAATTCGTCCTCTTaGACCCACCTACCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASHNSSS*THLPLV
Trigger: AACTAGGGGTAGGTGGGTGCAAGAGGACGAATTATG...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAAATCAACATGTCATACTaGCCCATCCCCTACAGTTGG +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQINMSY*PIPYSW
Trigger: CCAACTGTAGGGGATGGGGCAGTATGACATGTTGAT...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTGCCCTTCTTGCTTCTTaGCATTGGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAALLAS*HWAGIG
Trigger: TCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGC...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAAAGACCTGCCCTTCTTaGTTCTTGCCATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGKTCPS*FLPLGR
Trigger: CCTGCCCAATGGCAAGAAGCAAGAAGGGCAGGTCTT...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCACTCTACCCTCATCATaGCCTTTACACTCACCAAGC +
Preference number: 4 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGTLPSS*PLHSPS
Trigger: GCTTGGTGAGTGTAAAGGGCATGATGAGGGTAGAGT...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCCATTTTCCAAAGCCCTaGCATGCTGCCATCCCACTT +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGHFPKP*HAAIPL
Trigger: AAGTGGGATGGCAGCATGGCAGGGCTTTGGAAAATG...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCACTGCAAAGACCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISTAKTC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGTCTTTGCAGT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATTCCAACCGACCCACTaGAAAGACCTGCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVFQPTH*KDLLLF
Trigger: GAACAGCAGCAGGTCTTTGCAGTGGGTCGGTTGGAA...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCTGTGCTTCAGATGATTaGGAACCACGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISCASDD*EPRGLA
Trigger: AGCCAGGCCCCGTGGTTCCCAATCATCTGAAGCACA...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCCTTACATTCCTGAGCTaGGGTCTTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPALTFLS*GLLCFR
Trigger: TCTGAAGCACAGAAGACCCCAGCTCAGGAATGTAAG...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGCTTACATTCCTGAGCTaGGGTCTTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGLTFLS*GLLCFR
Trigger: TCTGAAGCACAGAAGACCCCAGCTCAGGAATGTAAG...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCGACTTCAAAATCAGCTaGCTTACATTCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRDFKIS*LTFLSW
Trigger: CCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTC...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCGACTTCAAAATCAGCTaGCTTACATTCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLDFKIS*LTFLSW
Trigger: CCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTC...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCCCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGA +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISPAPGV*NSSDLG
Trigger: TCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGG...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGCCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGA +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLPAPGV*NSSDLG
Trigger: TCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGG...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKRAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISRAVGP*LGRPQL
Trigger: GAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: RSKASVFKYGVQCPPPLGHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...GCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp ACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: TQSQIQSLSLQVWSSMPAHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...GGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCAGTACAAGACCAGGAGTaGAGAAGTGCAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTAVQDQE*RSAADA
Trigger: AGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTAC...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSKGQKL*SRQGTQ
Trigger: CTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGAGCCAGCGGGACTTTaGGCAAGGGACAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSEPAGL*ARDRSC
Trigger: ACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGTTAGCTCTTGCTTGTaGAAAGTCCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLVSSCL*KVLISQ
Trigger: CTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAAC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTGTTAGCTCTTGCTTGTaGAAAGTCCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QGMEFTRVQGIWFRARASVSSCL*KVLISQ
Trigger: CTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAAC...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGTAAGAGGCCTATACTaGGGCTGCTTCCAATGCCTG +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEVRGLY*GCFQCL
Trigger: CAGGCATTGGAAGCAGCCCCAGTATAGGCCTCTTAC...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGACCCTACTGCTGAATaGAGTGCTAACCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEDPTAE*SANPGA
Trigger: AGCACCAGGGTTAGCACTCCATTCAGCAGTAGGGTC...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGACCCTACTGCTGAATaGAGTGCTAACCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGDPTAE*SANPGA
Trigger: AGCACCAGGGTTAGCACTCCATTCAGCAGTAGGGTC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACTTGCTTCTTGCCATTaGGCAGGCATTGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSLASCH*AGIGDP
Trigger: AGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGGGCTCCACAACAGTaGCAACTTGTGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEGAPQQ*QLVMME
Trigger: CTCCATCATCACAAGTTGCCACTGTTGTGGAGCCCC...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTGGCTTCTCCAGTAGGTaGCAGCACACACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCGFSSR*QHTQSH
Trigger: GTGGCTCTGTGTGTGCTGCCACCTACTGGAGAAGCC...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGGCTTCTCCAGTAGGTaGCAGCACACACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQGFSSR*QHTQSH
Trigger: GTGGCTCTGTGTGTGCTGCCACCTACTGGAGAAGCC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATCAGGGGAAATGCAACTaGCCAGGTCACAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDQGKCN*PGHRAI
Trigger: GATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTG...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTAGCCTCTTTCAATGCTaGCAGCGCCCGGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCSLFQC*QRPAEI
Trigger: TATTTCCGCCGGGCGCTGTCAGCATTGAAAGAGGCT...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGAGCCTCTTTCAATGCTaGCAGCGCCCGGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQSLFQC*QRPAEI
Trigger: TATTTCCGCCGGGCGCTGTCAGCATTGAAAGAGGCT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGGCGGTTTCAAGGGACTaGATCCCAACAGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKAVSRD*IPTVPA
Trigger: TGCAGGAACTGTTGGGATTCAGTCCCTTGAAACCGC...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTGTCCCTCCTAACACCTaGAGCAGAGTTCTGACCACG +
Preference number: 4 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQAVPPNT*SRVLTT
Trigger: CGTGGTCAGAACTCTGCTTCAGGTGTTAGGAGGGAC...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGTCCCTCCTAACACCTaGAGCAGAGTTCTGACCACG +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCVPPNT*SRVLTT
Trigger: CGTGGTCAGAACTCTGCTTCAGGTGTTAGGAGGGAC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCTTCTGTGCTTCAGATaGTTGGGAACCACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQLLCFR*LGTTGP
Trigger: AGGCCCCGTGGTTCCCAATCATCTGAAGCACAGAAG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACTTCTGTGCTTCAGATaGTTGGGAACCACGGGGCCT +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSLLCFR*LGTTGP
Trigger: AGGCCCCGTGGTTCCCAATCATCTGAAGCACAGAAG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAGAGGAGCTCAGGTCCTaGAGGCGATTCAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSEELRS*RRFKKV
Trigger: AACCTTTTTGAATCGCCTTCAGGACCTGAGCTCCTC...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAACAGCATTGCAGAGATaGGCGCAAAACTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSTALQR*AQNWGS
Trigger: ACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGT...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAGCCTCCCACTTGCCCTaGAAGGCCAAGATCAAGATG +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSASHLP*KAKIKM
Trigger: CATCTTGATCTTGGCCTTTCAGGGCAAGTGGGAGGC...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATATTCCAAACCAGAAGTaGCTTGGAGGGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDIPNQK*LGGEQG
Trigger: CCCTTGCTCCCCTCCAAGTCACTTCTGGTTTGGAAT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGAAGGGTGGACTTCGTaGGAACCTGGCTTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQEGWTS*EPGLLS
Trigger: GGAAAGCAAGCCAGGTTCTCACGAAGTCCACCCTTC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATAGTGACTTACTCAGGTaGCTGCTAACCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDSDLLR*LLTLRS
Trigger: AGAGCGGAGGGTTAGCAGTCACCTGAGTAAGTCACT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCAAAAGTGAGAGAAGATaGCCTAAGTGTGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGKSERR*PKCDCS
Trigger: GCTGCAGTCACACTTAGGTCATCTTCTCTCACTTTT...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTCGACGTCGCCAAGCGTaGGCCTTATCCAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTRRRQA*ALSRQS
Trigger: ACTTTGTCTGGATAAGGCGCACGCTTGGCGACGTCG...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCCTGCAGCATCTCACTaGCAGTCCTGTTCGTGGACA +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCPAASH*QSCSWT
Trigger: TGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACT +
Preference number: 4 (lower is better)
Translates to: HPVPDPKPQSSSMEFNARSQSQH*RDERKT
Trigger: AGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCT...GCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACT +
Preference number: 4 (lower is better)
Translates to: VSASMQLSITAATEIRAGSQSQH*RDERKT
Trigger: AGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCT...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGGGGCTCTGAGCTTCTaGCCCCAGAATCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCGALSF*PQNHSN
Trigger: GTTGGAATGATTCTGGGGGCAGAAGCTCAGAGCCCC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTGCCTGGGCCATATGTTaGTGGGAATTTCCTCCACCC +
Preference number: 4 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFAWAIC*WEFPPP
Trigger: GGGTGGAGGAAATTCCCAGCAACATATGGCCCAGGC...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTAGGACTTCTTCCAGCTaGTGGAGGATGACACGTGCC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCRTSSS*WRMTRA
Trigger: GGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCT...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTAGGACTTCTTCCAGCTaGTGGAGGATGACACGTGCC +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTRTSSS*WRMTRA
Trigger: GGCACGTGTCATCCTCCAGCAGCTGGAAGAAGTCCT...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATAAGACCTGCCCTTCTTaGTTCTTGCCATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDKTCPS*FLPLGR
Trigger: CCTGCCCAATGGCAAGAAGCAAGAAGGGCAGGTCTT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTGCATGGGATAAGACCTaGCCTTCTTGCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAAWDKT*PSCFLP
Trigger: TGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGC...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGTGTGGGAAGTGAGGTaGAGCATTGTAGATAAGACA +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLVWEVR*SIVDKT
Trigger: TGTCTTATCTACAATGCTGCACCTCACTTCCCACAC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGACTGCAAAGACCTGCTaGTGTTCCCAAGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQTAKTC*CSQASR
Trigger: GCGAGAGGCTTGGGAACAGCAGCAGGTCTTTGCAGT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCACCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLTLVSS*LWKVLI
Trigger: GATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGT...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCCCTCCAGGGTCTCCGTaGGACCATCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTPPGSP*DHPFHP
Trigger: AGGATGGAAAGGATGGTCCCACGGAGACCCTGGAGG...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGACTTCAAAATCAGCTaGCTTACATTCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASDFKIS*LTFLSW
Trigger: CCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTC...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGA +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQPAPGV*NSSDLG
Trigger: TCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGAAGGGAAGTTGGCAATaGGATGTGCAGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLKGSWQ*DVQPGS
Trigger: AGACCCTGGCTGCACATCCCATTGCCAACTTCCCTT...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGCGGCCATTGCCACCTaGTGCTCTGCAGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGAAIAT*CSAGTA
Trigger: GGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGC...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISKCSRC*SSRDPR
Trigger: CCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAGTACAAGACCAGGAGTaGAGAAGTGCAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVVQDQE*RSAADA
Trigger: AGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTAC...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTTTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAFRATW*PKGSLI
Trigger: GATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAA...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTTGGGCCATATGTTGCTaGGAATTTCCTCCACCCTTC +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAWAICC*EFPPPF
Trigger: GAAGGGTGGAGGAAATTCCCAGCAACATATGGCCCA...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGGATCTACTGCACTGACAAGGGTGTCCTACAGAGTGGAGTGCTGTCATATGGCGTTAGCTCTTGCTTGTaGAAAGTCCTCATCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RIYCTDKGVLQSGVLSYGVSSCL*KVLISQ
Trigger: CTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAAC...GCCATATGACAGCACTCCACTCTGTAGGACACCCTTGTCAGTGCAGTAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGTGTTGCAGTCTaGTCAGAGCTGGAGCCCTAC +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTDGVAV*SELEPY
Trigger: GTAGGGCTCCAGCTCTGACCAGACTGCAACACCATC...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGACCCTACTGCTGAATaGAGTGCTAACCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKDPTAE*SANPGA
Trigger: AGCACCAGGGTTAGCACTCCATTCAGCAGTAGGGTC...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACCTTGCTTCTTGCCATTaGGCAGGCATTGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANLASCH*AGIGDP
Trigger: AGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAG...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATCTTGCTTCTTGCCATTaGGCAGGCATTGGAGACCCT +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDLASCH*AGIGDP
Trigger: AGGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAG...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGCCAACTGATGGATGTTaGGCAGCTAAAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKEPTDGC*AAKEGR
Trigger: CCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGG...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCTGCAGCAGGCAGCTCTaGAAAATGAAGCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISCSRQL*KMKPEQ
Trigger: CTGCTCTGGCTTCATTTTCCAGAGCTGCCTGCTGCA...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGACCCTACAAGGATCCTTaGCAGGAAAGCAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGPYKDP*QESRDC
Trigger: ACAATCCCTGCTTTCCTGCCAAGGATCCTTGTAGGG...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACAGGGGAAATGCAACTaGCCAGGTCACAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSQGKCN*PGHRAI
Trigger: GATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGAGGGTTCAAGGTATTTaGTTCAGGGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLRVQGI*FRARAS
Trigger: ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCT...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
3UTR CAA 72 bp GGGACCCTACAAGGATCCTTGGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GTLQGSLAGKQG*CSFEGFTVSES
Trigger: ACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTGCCAAGGATCCTTGTAGGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAATCTCTGACTTTACCTTaGGATCTGTCTTCATACCCT +
Preference number: 4 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQSLTLP*DLSSYP
Trigger: AGGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGA...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTGTCTATACCCTTACCTaGAGAATGCTGTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPVYTLT*RMLFFP
Trigger: AGGAAAGAACAGCATTCTTCAGGTAAGGGTATAGAC...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAGTGACTTACTCAGGTaGCTGCTAACCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSSDLLR*LLTLRS
Trigger: AGAGCGGAGGGTTAGCAGTCACCTGAGTAAGTCACT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTCCTTCATTATATTGTaGACCATCAGATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKSFIIL*TIRSRS
Trigger: AGAACGAGATCTGATGGTGCACAATATAATGAAGGA...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGTCCTTCATTATATTGTaGACCATCAGATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SRRFRKVVKATFRATWWPSFIIL*TIRSRS
Trigger: AGAACGAGATCTGATGGTGCACAATATAATGAAGGA...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCATCCTTCATTATATTGTaGACCATCAGATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: KPQSSSMEFNARLRLATASFIIL*TIRSRS
Trigger: AGAACGAGATCTGATGGTGCACAATATAATGAAGGA...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR GCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATAATCCCAACAGTTCCTaGAGCATCTCACTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDNPNSS*SISLPV
Trigger: GACTGGCAGTGAGATGCTGCAGGAACTGTTGGGATT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCAAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACT +
Preference number: 4 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTASQSQH*RDERKT
Trigger: AGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCT...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGGCACACAGGCCACTTaGCGGGATGAGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGGTQAT*RDEGSA
Trigger: TGCAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCC...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGTCTGGCTGCGGCCATTaGCACCTGGTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGSGCGH*HLVLCR
Trigger: CCTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGA...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR GCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGATCAGCTCCTGGTTCTaGTCCCCAAGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKISSWF*SPSSAA
Trigger: TGCTGCTGAGCTTGGGGAGCAGAACCAGGAGCTGAT...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACCCTTACCTGAAGAATaGTGTTCTTTCCTAGCCACC +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSPLPEE*CSFLAT
Trigger: GGTGGCTAGGAAAGAACAGCATTCTTCAGGTAAGGG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCACCCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSPLVSS*LWKVLI
Trigger: GATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGG...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTTCCTACAGAGTGGAGTaGTGTCATATGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCSYRVE*CHMAWD
Trigger: GTCCCAGGCCATATGACAGCACTCCACTCTGTAGGA...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGCATGGGATAAGACCTaGCCTTCTTGCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDAWDKT*PSCFLP
Trigger: TGGCAAGAAGCAAGAAGGGCAGGTCTTATCCCATGC...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR GCA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAAGCTCCAATGGCTTTTaGCAGGCAATTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSSSNGF*QAILPP
Trigger: TGGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCT...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTAAGGGAAGTTGGCAATaGGATGTGCAGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCKGSWQ*DVQPGS
Trigger: AGACCCTGGCTGCACATCCCATTGCCAACTTCCCTT...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFKCSRC*SSRDPR
Trigger: CCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTT...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSKCSRC*SSRDPR
Trigger: CCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGTACAAGACCAGGAGTaGAGAAGTGCAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLVQDQE*RSAADA
Trigger: AGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTAC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAAAACCAGGAAAGGGATaGGGTGGATACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVKPGKG*GGYPIL
Trigger: CAAAATGGGGTATCCACCCCATCCCTTTCCTGGTTT...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCAGTCTGGTCAGAGCTaGAGCCCTACAAGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCQSGQS*SPTRVR
Trigger: TCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTG...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATCCAACTGATGGATGTTaGGCAGCTAAAGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDPTDGC*AAKEGR
Trigger: CCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGG...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTGCCGGAAAGTCAAAGTaGGACATCGACCAATGTCTA +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAAGKSK*DIDQCL
Trigger: TAGACATTGGTCGATGTCCCACTTTGACTTTCCGGC...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGTTTGGACGGAGGGTCTaGACCTCAGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVFGRRV*TSAPPP
Trigger: GGGTGGTGGAGCTGAGGTCCAGACCCTCCGTCCAAA...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAATTCCCACCTTGTCCTaGGCTGAGATCCCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSIPTLS*AEIPGL
Trigger: CAAACCTGGGATCTCAGCCCAGGACAAGGTGGGAAT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCTCCTTACACCCTTCCTaGACACAGTCTCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISSLHPS*TQSHLS
Trigger: TGAGAGGTGAGACTGTGTCCAGGAAGGGTGTAAGGA...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGTCCTTACACCCTTCCTaGACACAGTCTCACCTCTCA +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKSLHPS*TQSHLS
Trigger: TGAGAGGTGAGACTGTGTCCAGGAAGGGTGTAAGGA...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGAGGGTTCAAGGTATTTaGTTCAGGGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQRVQGI*FRARAS
Trigger: ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCT...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGAGGAGCTCAGGTCCTaGAGGCGATTCAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQEELRS*RRFKKV
Trigger: AACCTTTTTGAATCGCCTTCAGGACCTGAGCTCCTC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDSLELV*SRRNSS
Trigger: ACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATATCTTGATCCCAGCCTaGCTGCTGCTACATCTAATC +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDILIPA*LLLHLI
Trigger: GATTAGATGTAGCAGCAGTCAGGCTGGGATCAAGAT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGCAGCTTCTCAGAGCCTaGGAGCCAGAAACCGTCCCC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGQLLRA*EPETVP
Trigger: GGGGACGGTTTCTGGCTCTCAGGCTCTGAGAAGCTG...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCC +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVQKLKS*CHQRTS
Trigger: GGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTAAAAGCTTCCTTAACTaGGGACGGACCTTCGACGTC +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTKSFLN*GRTFDV
Trigger: GACGTCGAAGGTCCGTCCGCAGTTAAGGAAGCTTTT...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAATTCCAACCGACCCACTaGAAAGACTATGACAGCATC +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQFQPTH*KDYDSI
Trigger: GATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAA...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATATTTCCTCTTGTCTCTaGCATTCAGGGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDISSCL*HSGSSF
Trigger: GAAGGAGCTCCCTGAATGGCAGAGACAAGAGGAAAT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCGCCCTTCTTGCTTCTTaGCATTGGGCAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTALLAS*HWAGIG
Trigger: TCCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGC...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACACTCTACCCTCATCATaGCCTTTACACTCACCAAGC +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANTLPSS*PLHSPS
Trigger: GCTTGGTGAGTGTAAAGGGCATGATGAGGGTAGAGT...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATAGCTCCAATGGCTTTTaGCAGGCAATTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDSSNGF*QAILPP
Trigger: TGGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCT...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAATCAAAGGACATCCCTaGCCCATTCACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQIKGHP*PIHISV
Trigger: GACAGAGATGTGAATGGGGCAGGGATGTCCTTTGAT...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCT +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVMTTPG*PWANTA
Trigger: AGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCAT...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGGCAATGACTACCCCTaGGTGGCCCTGGGCCAATAC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGGNDYP*VALGQY
Trigger: GTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCC...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGTCTCTTATCAGCTCCTaGTTCTGCTCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQSLISS*FCSPSS
Trigger: TGAGCTTGGGGAGCAGAACCAGGAGCTGATAAGAGA...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCATCTCTTATCAGCTCCTaGTTCTGCTCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSSLISS*FCSPSS
Trigger: TGAGCTTGGGGAGCAGAACCAGGAGCTGATAAGAGA...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACTCAGTCTTCAAGTATaGAGTTCAATGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSLSLQV*SSMPAS
Trigger: GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAACCCATCCCCTACAGTTaGATAGTCCCCATAATTCGT +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQPIPYS*IVPIIR
Trigger: ACGAATTATGGGGACTATCCAACTGTAGGGGATGGG...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CATAACGCCTCACATCCCAAGTCTATACCCTTACCTGAAGAATGCTGTTCTTTCGGGTGTCCTACAGAGTaGAGTGCTGTCATATGGCCT +
Preference number: 4 (lower is better)
Translates to: HNASHPKSIPLPEECCSFGCPTE*SAVIWP
Trigger: AGGCCATATGACAGCACTCCACTCTGTAGGACACCC...GAAAGAACAGCATTCTTCAGGTAAGGGTATAGACTTGGGATGTGAGGCGTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTTAGTGGTGGGTGTCTaGTATGAGGATCTACTGCAC +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLLVVGV*YEDLLH
Trigger: GTGCAGTAGATCCTCATACCAGACACCCACCACTAA...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAAAGGATGTCACACAGTaGACAGAAAGTCCAAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQKDVTQ*TESPSE
Trigger: CTCGCTTGGACTTTCTGTCCACTGTGTGACATCCTT...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTGAACTCTTGAGGGTGTaGGAAGTGAGGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQAELLRV*EVRCSI
Trigger: AATGCTGCACCTCACTTCCCACACCCTCAAGAGTTC...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTGAACTCTTGAGGGTGTaGGAAGTGAGGTGCAGCATT +
Preference number: 4 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCELLRV*EVRCSI
Trigger: AATGCTGCACCTCACTTCCCACACCCTCAAGAGTTC...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACCCTACAAGGATCCTTaGCAGGAAAGCAGGGATTGT +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSPYKDP*QESRDC
Trigger: ACAATCCCTGCTTTCCTGCCAAGGATCCTTGTAGGG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCAGGGTTCAAGGTATTTaGTTCAGGGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTRVQGI*FRARAS
Trigger: ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCT...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTGACAAAGCTAGGGCCTaGGTCTCTACTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQADKARA*VSTSFI
Trigger: AATGAAGGAAGTAGAGACTCAGGCCCTAGCTTTGTC...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSSLELV*SRRNSS
Trigger: ACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR TCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACTACTCTATGAGTTGTaGCTTTCAAGGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSLLYEL*LSRTWP
Trigger: GGGCCAAGTCCTTGAAAGTCACAACTCATAGAGTAG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCTACTCTATGAGTTGTaGCTTTCAAGGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQLLYEL*LSRTWP
Trigger: GGGCCAAGTCCTTGAAAGTCACAACTCATAGAGTAG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACAAAAGTGAGAGAAGATaGCCTAAGTGTGACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANKSERR*PKCDCS
Trigger: GCTGCAGTCACACTTAGGTCATCTTCTCTCACTTTT...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGCGCGACCTGTCCGGCTaGAAAAGCTTCCTTAACTGC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVRDLSG*KSFLNC
Trigger: GCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCG...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACT +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISSQSQH*RDERKT
Trigger: AGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATG +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTASSKR*KGKLAM
Trigger: CATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGC...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTTCAAATTTCAGGACCTaGAGACAGTACAGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAASNFRT*RQYRLD
Trigger: ATCTAGCCTGTACTGTCTGCAGGTCCTGAAATTTGA...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTTTCCAACCGACCCACTaGAAAGACTATGACAGCATC +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCFQPTH*KDYDSI
Trigger: GATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAA...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAATTTCCTCTTGTCTCTaGCATTCAGGGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSISSCL*HSGSSF
Trigger: GAAGGAGCTCCCTGAATGGCAGAGACAAGAGGAAAT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTATCAACATGTCATACTaGCCCATCCCCTACAGTTGG +
Preference number: 4 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFINMSY*PIPYSW
Trigger: CCAACTGTAGGGGATGGGGCAGTATGACATGTTGAT...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAATCAAAGGACATCCCTaGCCCATTCACATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSIKGHP*PIHISV
Trigger: GACAGAGATGTGAATGGGGCAGGGATGTCCTTTGAT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGCTTGGGCTCAAGCCTaGAGGGGAAATGCAACTGGC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGAWAQA*RGNATG
Trigger: GCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGC...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCTTACATTCCTGAGCTaGGGTCTTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQLTFLS*GLLCFR
Trigger: TCTGAAGCACAGAAGACCCCAGCTCAGGAATGTAAG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGGACTTCAAAATCAGCTaGCTTACATTCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLDFKIS*LTFLSW
Trigger: CCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTC...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGAGGGCTCTGCACAGTaGAATGCCTCCAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVEGSAQ*NASNKS
Trigger: GCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCTC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGG +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTHKPSK*QREAHR
Trigger: CCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATG...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGCTGCTCCACTCCAGATaGCATCTAGCACACGGCTGC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGLLHSR*HLAHGC
Trigger: GCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAG...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGTTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKFRATW*PKGSLI
Trigger: GATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAA...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGCCGGAAAGTCAAAGTaGGACATCGACCAATGTCTA +
Preference number: 4 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTAGKSK*DIDQCL
Trigger: TAGACATTGGTCGATGTCCCACTTTGACTTTCCGGC...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR TCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTCCCTCCTAACACCTaGAGCAGAGTTCTGACCACG +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGVPPNT*SRVLTT
Trigger: CGTGGTCAGAACTCTGCTTCAGGTGTTAGGAGGGAC...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGCCACTGCAAAGACTATaGCAGCATCAAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKPLQRL*QHQISG
Trigger: TCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGG...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCTTTTGGGCAACAACCTaGATACCTTTTCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISFWATT*IPFQGS
Trigger: AGAGCCTTGAAAAGGTATTCAGGTTGTTGCCCAAAA...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR GCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCCCCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTPLVSS*LWKVLI
Trigger: GATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGG...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGACTTCAAAATCAGCTaGCTTACATTCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCDFKIS*LTFLSW
Trigger: CCAGCTCAGGAATGTAAGCCAGCTGATTTTGAAGTC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGCACTGCTGCAAGGCCTaGGCCATATGTTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGHCCKA*AICCWE
Trigger: TTCCCAGCAACATATGGCCCAGGCCTTGCAGCAGTG...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCCCCATCCCCTACAGTTaGATAGTCCCCATAATTCGT +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTPIPYS*IVPIIR
Trigger: ACGAATTATGGGGACTATCCAACTGTAGGGGATGGG...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGGGGCCTAATGAGCTCTaGTCAATTTGTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKGPNEL*SICSFS
Trigger: GGAAAATGAACAAATTGACCAGAGCTCATTAGGCCC...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACACATACAAGCTCCAATaGCTTTTGCCAGGCAATTCT +
Preference number: 4 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANTYKLQ*LLPGNS
Trigger: AGAATTGCCTGGCAAAAGCCATTGGAGCTTGTATGT...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATTTCATCCTTTTACATaGTTCCCATCTACCCTCACA +
Preference number: 4 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVFHPFT*FPSTLT
Trigger: TGTGAGGGTAGATGGGAACCATGTAAAAGGATGAAA...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGACAGCATTGCAGAGATaGGCGCAAAACTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVTALQR*AQNWGS
Trigger: ACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGT...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR TCA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTTTTTGGGCAACAACCTaGATACCTTTTCAAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCFWATT*IPFQGS
Trigger: AGAGCCTTGAAAAGGTATTCAGGTTGTTGCCCAAAA...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGKCSRC*SSRDPR
Trigger: CCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTT...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGTCTCTTATCAGCTCCTaGTTCTGCTCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVSLISS*FCSPSS
Trigger: TGAGCTTGGGGAGCAGAACCAGGAGCTGATAAGAGA...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGCTCAGTCTTCAAGTATaGAGTTCAATGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVLSLQV*SSMPAS
Trigger: GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAG...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGCCCTCGAGACCTCTTTaGCAGCCTGAATGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGPSRPL*QPECQS
Trigger: GCTTTGACATTCAGGCTGCCAAAGAGGTCTCGAGGG...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 72 bp CAAATTCTGATTCTGCCACTTCCTGCCTGTCAAACCTaGGGAAGTTGTTCAACCTACCAAAACCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QILILPLPACQT*GSCSTYQNLSF
Trigger: GAAACTGAGGTTTTGGTAGGTTGAACAACTTCCCAAGGTTTGACAGGCAGGAAGTGGCAGAATCAGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCCCACTGCAAAGACTATaGCAGCATCAAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTPLQRL*QHQISG
Trigger: TCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGG...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CATAACGCCTCACATCCCAAGTCTATACCCTTACCTGAAGAATGCTGTTCTTTCATCAAGTTCAAATTCTaGTTCTGCCACTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HNASHPKSIPLPEECCSFIKFKF*FCHFLP
Trigger: AGGCAGGAAGTGGCAGAATCAGAATTTGAACTTGAT...GAAAGAACAGCATTCTTCAGGTAAGGGTATAGACTTGGGATGTGAGGCGTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCTCCTTCATTATATTGTaGACCATCAGATCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QRILTTDSERELFYLGISSFIIL*TIRSRS
Trigger: AGAACGAGATCTGATGGTGCACAATATAATGAAGGA...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGAATCCCAACAGTTCCTaGAGCATCTCACTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGNPNSS*SISLPV
Trigger: GACTGGCAGTGAGATGCTGCAGGAACTGTTGGGATT...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR GCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGCATAATTCGTCCTCTTaGACCCACCTACCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVHNSSS*THLPLV
Trigger: AACTAGGGGTAGGTGGGTGCAAGAGGACGAATTATG...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGCCGGAAAGTCAAAGTaGGACATCGACCAATGTCTA +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVAGKSK*DIDQCL
Trigger: TAGACATTGGTCGATGTCCCACTTTGACTTTCCGGC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAATTCAGAAGCTAGTATaGAAAGGTGATTTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQIQKLV*KGDLCD
Trigger: GTCACACAAATCACCTTTCCATACTAGCTTCTGAAT...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CCA 90 bp AATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCAGGACCACATACAAGCTCCAATaGCTTTTGCCAGGCAATTCT +
Preference number: 4 (lower is better)
Translates to: NHSNRPTAKTMTASNFRTTYKLQ*LLPGNS
Trigger: AGAATTGCCTGGCAAAAGCCATTGGAGCTTGTATGT...GGTCCTGAAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR TCA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGT +
Preference number: 4 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGSLELV*SRRNSS
Trigger: ACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACT...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR TCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGCAGAAGCTAAAGTCTTaGTGCCATCAAAGGACATCC +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVQKLKS*CHQRTS
Trigger: GGATGTCCTTTGATGGCATCAAGACTTTAGCTTCTG...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR GCA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGTGTGGGAAGTGAGGTaGAGCATTGTAGATAAGACA +
Preference number: 4 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVVWEVR*SIVDKT
Trigger: TGTCTTATCTACAATGCTGCACCTCACTTCCCACAC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
3UTR CAA 72 bp AGGGACAGAATTCAGAAGCTAGTATGGAAAGGTGATTaGTGTGACAAATCAAGTTCAAATTCTGATTCTGCC +
Preference number: 4 (lower is better)
Translates to: RDRIQKLVWKGD*CDKSSSNSDSA
Trigger: GGCAGAATCAGAATTTGAACTTGATTTGTCACACAAATCACCTTTCCATACTAGCTTCTGAATTCTGTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS GCA 90 bp AGCGCCCGGCGGAAATATCCCAGAGCTTCCGGGCTCAGGTGCGGGTaGGAATCTGGAGCCGGCTCCGAGCGCCCATCCGGAGGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: SARRKYPRASGLRCG*ESGAGSERPSGGGQ
Trigger: CTGGCCGCCTCCGGATGGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCGCCGGGCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 90 bp GCTGACAGCGCCCGGCGGAAATATCCCAGAGCTTCCGGGCTCAGGTaGGGGTGCGAATCTGGAGCCGGCTCCGAGCGCCCATCCGGAGGC +
Preference number: 5 (lower is better)
Translates to: ADSARRKYPRASGLR*GCESGAGSERPSGG
Trigger: GCCTCCGGATGGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCGCCGGGCGCTGTCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS CCA 90 bp GCGGAAATATCCCAGAGCTTCCGGGCTCAGGTGCGGGTGCGAATCTaGAGCCGGCTCCGAGCGCCCATCCGGAGGCGGCCAGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: AEISQSFRAQVRVRI*SRLRAPIRRRPGLP
Trigger: CGGCAACCCTGGCCGCCTCCGGATGGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CAA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCAAACCGGCGCCCCACCTaGTGTGGAGAGCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPNRRPT*CGERGP
Trigger: GGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTT...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS CCA 90 bp GCACACGGCGGCGCAGCTTGCGCGTCACAGAGGGGCTGGTCAGGATaGCATCGAGCACATGAGAGCCAGCGGGACTTTGGGCAAGGGACA +
Preference number: 5 (lower is better)
Translates to: AHGGAACASQRGWSG*HRAHESQRDFGQGT
Trigger: TGTCCCTTGCCCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp GGTTCTGCAGCACACGGCGGCGCAGCTTGCGCGTCACAGAGGGGCTaGTCAGGATGGCATCGAGCACATGAGAGCCAGCGGGACTTTGGG +
Preference number: 5 (lower is better)
Translates to: GSAAHGGAACASQRG*SGWHRAHESQRDFG
Trigger: CCCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGTGCTGCAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGAATGCCCGCCTCCGCTaGGCCACCGCACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLNARLR*ATAPCC
Trigger: GCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATT...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS GCA 90 bp GAGAGCGCGGACCCTGCCCCATGTGTGCTTCGCGACCTGTCCGGCTaGAAAAGCTTCCTTAACTGCGGACGGACCTTCGACGTCGCCAAG +
Preference number: 5 (lower is better)
Translates to: ESADPAPCVLRDLSG*KSFLNCGRTFDVAK
Trigger: CTTGGCGACGTCGAAGGTCCGTCCGCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGTCCGCGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CAA 90 bp GTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTCTGGCTGCGGCCATaGCCACCTGGTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VFKYGVQCPPPLGHRTLLLWLRP*PPGALQ
Trigger: CTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGAG...CAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTACACGGCGGCGCAGCTaGCGCGTCACAGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPTRRRS*RVTEGL
Trigger: CAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGT...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp ACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCCACAGGGAGCTCCTTCGTaGGACCTCCACACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: TPQWACQAPEPPAPTCTPQGAPS*DLHTAA
Trigger: TGCAGCAGTGTGGAGGTCCAACGAAGGAGCTCCCTG...TGGAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCAACCGGCGCCCCACCTaGTGTGGAGAGCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: VPDPKPQSSSMEFNARLRNRRPT*CGERGP
Trigger: GGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTT...GCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCAGCCCCGCGCCCCCGTTaGCCACCAGCTGGGAACCGG +
Preference number: 5 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTAAPRPR*PPAGNR
Trigger: CCGGTTCCCAGCTGGTGGCAAACGGGGGCGCGGGGC...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS GCA 90 bp GGGAAGTTGGCAATGGGATGTGCAGCCAGGGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGGCTCTGGAGTCTTGGGGGCTCCAAC +
Preference number: 5 (lower is better)
Translates to: GKLAMGCAARVCSCP*KCSSKRLWSLGGSN
Trigger: GTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACATCCCATTGCCAACTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp CTGCAGCTGCCCCTGCAAGTGCTCCTCAAAGAGGCTCTGGAGTCTTaGGGGCTCCAACACCAGCAGGACCTGCTCCAGGAGTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: LQLPLQVLLKEALES*GLQHQQDLLQESGT
Trigger: AGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp AGGGCTCTGCACAGTGGAATGCCTCCAACAAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTCTGCGACAGGCCCCCACCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: RALHSGMPPTRAVGP*LGRPQLCDRPPPGQ
Trigger: TTGCCCTGGTGGGGGCCTGTCGCAGAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCTTGTTGGAGGCATTCCACTGTGCAGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000557362.1
ENST00000642262.1
ENST00000644840.2
ENST00000646863.1
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp CAGCAGCAATTTCCTTCCGGGCCCTCAAGGCTGCTCCACTCCAGATaGCATCTAGCACACGGCTGCCATGGCGACTACAGGCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: QQQFPSGPSRLLHSR*HLAHGCHGDYRPEP
Trigger: TGGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAGCCTTGAGGGCCCGGAAGGAAATTGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp TCTTGCCATTGGGCAGGCATTGGAGACCCTACTGCTGAATGGAGTGCTAACCCTAACCGGCGCCCCACCTaGTGTGGAGAGCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: SCHWAGIGDPTAEWSANPNRRPT*CGERGP
Trigger: GGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTT...AGGGTTAGCACTCCATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACTCTGGCTGCGGCCATaGCCACCTGGTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: KPQSSSMEFNARLRLATALWLRP*PPGALQ
Trigger: CTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGAG...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCTCTGGCTGCGGCCATaGCCACCTGGTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGLWLRP*PPGALQ
Trigger: CTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGAG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCAATGCCCGCCTCCGCTaGGCCACCGCACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGNARLR*ATAPCC
Trigger: GCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATT...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCACCCTGCTGCTGTTCCCATTTCCTTCCGGGCCTTaGGGCAAGGGACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: YGVQCPPPLGHRTLLLFPFPSGP*GKGQKL
Trigger: CAGCTTCTGTCCCTTGCCCAAAGGCCCGGAAGGAAA...TGGGAACAGCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp CTATACTGGGGCTGCTTCCAATGCCTGTCCTTTAGAGCTTTCCCGGGCTTCCTCCTCTGGCTGCGGCCATaGCCACCTGGTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LYWGCFQCLSFRAFPGFLLWLRP*PPGALQ
Trigger: CTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGAG...GAGGAAGCCCGGGAAAGCTCTAAAGGACAGGCATTGGAAGCAGCCCCAGTATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS TCA 90 bp CATCAGATCTCGTTCTTCCCCAGTCTCGGGAGCCTCTTTCAATGCTaGCAGCGCCCGGCGGAAATATCCCAGAGCTTCCGGGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: HQISFFPSLGSLFQC*QRPAEISQSFRAQV
Trigger: CACCTGAGCCCGGAAGCTCTGGGATATTTCCGCCGGGCGCTGTCAGCATTGAAAGAGGCTCCCGAGACTGGGGAAGAACGAGATCTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 90 bp ACAGGGGACAGCAGCTCAGGGGTAGTGACTGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATGGGATGTGCAGCCAGGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TGDSSSGVVTASSKR*KGKLAMGCAARVCS
Trigger: GCTGCAGACCCTGGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGCAGTCACTACCCCTGAGCTGCTGTCCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 90 bp GGGCCCTCAAGGCTGCTCCACTCCAGATGGCATCTAGCACACGGCTaGCATGGCGACTACAGGCCAGAGCCACATATTGTCCCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: GPSRLLHSRWHLAHG*HGDYRPEPHIVPLG
Trigger: ACCTAAAGGGACAATATGTGGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAGCCTTGAGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGAACCGGCGCCCCACCTaGTGTGGAGAGCGCGGACCC +
Preference number: 5 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKENRRPT*CGERGP
Trigger: GGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTT...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp AAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCGCAAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: KPQSSSMEFNARLRLATARGSGV*GAPTPA
Trigger: TGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCT...TGCGGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGRGSGV*GAPTPA
Trigger: TGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCT...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGAGAGCCAGCGGGACTTaGGGCAAGGGACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKRASGT*GKGQKL
Trigger: CAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCT...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTAACACGGCGGCGCAGCTaGCGCGTCACAGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVTRRRS*RVTEGL
Trigger: CAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGT...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAAATGCCCGCCTCCGCTaGGCCACCGCACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSNARLR*ATAPCC
Trigger: GCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATT...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TTTCAAGGCTCTGGCTTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCAGGGAGCTCCTTCGTaGGACCTCCACACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: FQGSGLGSSLQGKCNWPGQGAPS*DLHTAA
Trigger: TGCAGCAGTGTGGAGGTCCAACGAAGGAGCTCCCTG...ACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 90 bp GGGAGCTGTAGCAAAGCACTTTGTAATACATGGACCCCGCATCGGTaGCAGGCCACAGTGCGCAAGTTAGAGCGCAGAGCAGCCCACACG +
Preference number: 5 (lower is better)
Translates to: GSCSKALCNTWTPHR*QATVRKLERRAAHT
Trigger: CGTGTGGGCTGCTCTGCGCTCTAACTTGCGCACTGTGGCCTGTCACCGATGCGGGGTCCATGTATTACAAAGTGCTTTGCTACAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS CCA 90 bp GAGCACATGAGAGCCAGCGGGACTTTGGGCAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAGACTTCGAAGTACAAGACCAGGAGT +
Preference number: 5 (lower is better)
Translates to: EHMRASGTLGKGQKL*SRQGTQTSKYKTRS
Trigger: ACTCCTGGTCTTGTACTTCGAAGTCTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCTCATGTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGCGCTGCAAAGGGAAGTaGGCAATGGGATGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKRCKGK*AMGCAA
Trigger: GGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCG...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCCGCTGCAAAGGGAAGTaGGCAATGGGATGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PKPQSSSMEFNARLRLATRCKGK*AMGCAA
Trigger: GGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCG...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTCGCTGCAAAGGGAAGTaGGCAATGGGATGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVRCKGK*AMGCAA
Trigger: GGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCG...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp TTGGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGGGCCTGGGCCATATGTaGCTGGGAATTTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: LGSSLQGKCNWPGHRAIKGLGHM*LGISST
Trigger: GGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC...CTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCGCTTGGCCACCTTTCCTTCCGGGCCTTaGGGCAAGGGACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PKPQSSSMEFNARLRLATFPSGP*GKGQKL
Trigger: CAGCTTCTGTCCCTTGCCCAAAGGCCCGGAAGGAAA...GGTGGCCAAGCGGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS CCA 90 bp CCTCCTCCTCCGTCAGTCCATAGTACACCTCATAAGCCATCAAAGTaGCAAAGAGAGGCACACAGGCCACTTGCCGGGATGAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PPPPSVHSTPHKPSK*QREAHRPLAGMRAL
Trigger: CAGAGCCCTCATCCCGGCAAGTGGCCTGTGTGCCTCTCTTTGCCACTTTGATGGCTTATGAGGTGTACTATGGACTGACGGAGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000557362.1
ENST00000642262.1
ENST00000644840.2
ENST00000646863.1
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp CTCAAGGCTGCTCCACTCCAGATGGCATCTAGCACACGGCTGCCATaGCGACTACAGGCCAGAGCCACATATTGTCCCTTTAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LKAAPLQMASSTRLP*RLQARATYCPFRFC
Trigger: GCAGAACCTAAAGGGACAATATGTGGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAGCCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp CGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATCAGCTCCTGGTTCTGCTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: RRFRKVVKATFRATW*PKGSLISSWFCSPS
Trigger: GCTTGGGGAGCAGAACCAGGAGCTGATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp CAGCAGCAATTTCCTTCCGGGCCTTTGGGCAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAGACTTCGAAGTACAAGACCAGGAGT +
Preference number: 5 (lower is better)
Translates to: QQQFPSGPLGKGQKL*SRQGTQTSKYKTRS
Trigger: ACTCCTGGTCTTGTACTTCGAAGTCTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTTGCCCAAAGGCCCGGAAGGAAATTGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAAAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQRGSGV*GAPTPA
Trigger: TGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCT...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: VSASMQLSITAATEIRAGRGSGV*GAPTPA
Trigger: TGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCT...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GGCTACAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTACTCTGGCTGCGGCCATaGCCACCTGGTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GYSVSSQQTVRESCSTWVLWLRP*PPGALQ
Trigger: CTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGAG...TACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTGTAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCAGAGCCAGCGGGACTTaGGGCAAGGGACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLRASGT*GKGQKL
Trigger: CAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCT...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTACACGGCGGCGCAGCTaGCGCGTCACAGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCTRRRS*RVTEGL
Trigger: CAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGT...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTACACGGCGGCGCAGCTaGCGCGTCACAGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCTRRRS*RVTEGL
Trigger: CAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGT...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CCACTCCACAGTGGGCTTGTCAAGCTCCTGAGCCACCCGCCCCCACCTGCACTCTCAAACCTTGGGAAGTaGTTCAACCTACCAAAACCT +
Preference number: 5 (lower is better)
Translates to: PLHSGLVKLLSHPPPPALSNLGK*FNLPKP
Trigger: AGGTTTTGGTAGGTTGAACAACTTCCCAAGGTTTGA...GAGTGCAGGTGGGGGCGGGTGGCTCAGGAGCTTGACAAGCCCACTGTGGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGGGTATGGAGTTTACGAGGGTTCAAGGTATTTGGTTCAGGGCCAGGGCCAGTCCCTCCCCTTGGACTTaGCCCTTCTTACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QGMEFTRVQGIWFRARASPSPWT*PFLLAR
Trigger: CCTGGCCAGTAAGAAGGGCAAAGTCCAAGGGGAGGG...ACTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTCGTAAACTCCATACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGTTTCAAGGCTCTGGCTaGGGCTCAAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: VSASMQLSITAATEIRAGFQGSG*GSSLQG
Trigger: CCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 90 bp GGCTCCAACACCAGCAGGACCTGCTCCAGGAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGTAGGGGACTGCCATCTACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GSNTSRTCSRSLELV*SRRNSSRGLPSTEE
Trigger: TTCCTCAGTAGATGGCAGTCCCCTACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 90 bp CCCAGACTTCGAAGTACAAGACCAGGAGTGGAGAAGTGCAGCAGATaGTGGAGCAGTAGAGACCCAAGGACTGTCACATCCCCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: PRLRSTRPGVEKCSR*WSSRDPRTVTSPKA
Trigger: AGCCTTGGGGGATGTGACAGTCCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTACTTCGAAGTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATaGTGGCCGAAAGGGTCTCTTATCAGCTCCTGGTTCTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SRRFRKVVKATFRAT*WPKGSLISSWFCSP
Trigger: TGGGGAGCAGAACCAGGAGCTGATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGGAGTTCAATGCCCGCCTCCCGCTGCAAAGGGAAGTaGGCAATGGGATGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: QSQIQSLSLQVWSSMPASRCKGK*AMGCAA
Trigger: GGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCG...GGAGGCGGGCATTGAACTCCATACTTGAAGACTGAGGCTTTGGATCTGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp GTCTCAGCTTCCATGCAACTGTCCATCACGGCTGCAACTGAAATCAGAGCTGGGGGCCTGGGCCATATGTaGCTGGGAATTTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: VSASMQLSITAATEIRAGGLGHM*LGISST
Trigger: GGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC...CCCAGCTCTGATTTCAGTTGCAGCCGTGATGGACAGTTGCATGGAAGCTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CAGTGGACAGAAAGTCCAAGCGAGGGAGGGTCTGACCCAGTGCTGATGGAGATTTGCCCTTCTTGCTTCTaGCCATTGGGCAGGCATTGG +
Preference number: 5 (lower is better)
Translates to: QWTESPSEGGSDPVLMEICPSCF*PLGRHW
Trigger: CCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGCA...AATCTCCATCAGCACTGGGTCAGACCCTCCCTCGCTTGGACTTTCTGTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCGGCCAGAGTCCAGGCTaGACTCATTCCCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLGQSPG*THSHLV
Trigger: GACAAGGTGGGAATGAGTCAAGCCTGGACTCTGGCC...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS GCA 90 bp GTCAAGGCACCCAGACTTCGAAGTACAAGACCAGGAGTGGAGAAGTaGAGCAGATGCTGGAGCAGTAGAGACCCAAGGACTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: VKAPRLRSTRPGVEK*SRCWSSRDPRTVTS
Trigger: GGATGTGACAGTCCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTACTTCGAAGTCTGGGTGCCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 90 bp AGACTTCGAAGTACAAGACCAGGAGTGGAGAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGGACTGTCACATCCCCCAAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RLRSTRPGVEKCSRC*SSRDPRTVTSPKAL
Trigger: CAGAGCCTTGGGGGATGTGACAGTCCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTACTTCGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCAAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSRGSGV*GAPTPA
Trigger: TGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCT...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTCTCTGGCTGCGGCCATaGCCACCTGGTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQALWLRP*PPGALQ
Trigger: CTGCAGAGCACCAGGTGGCAATGGCCGCAGCCAGAG...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CCTGATGGTGTTGCAGTCTGGTCAGAGCTGGAGCCCTACAAGGGTAAGAGGCCTTCGCCCGATTCACCTTaGACGTGTACAAGCAAAACC +
Preference number: 5 (lower is better)
Translates to: PDGVAVWSELEPYKGKRPSPDSP*TCTSKT
Trigger: GGTTTTGCTTGTACACGTCAAAGGTGAATCGGGCGA...AGGCCTCTTACCCTTGTAGGGCTCCAGCTCTGACCAGACTGCAACACCATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp ATCCCCTACAGTTGGATAGTCCCCATAATTCGTCCTCTTGCACCCACCTACCCCTCTTGCTTCTTGCCATaGGGCAGGCATTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: IPYSWIVPIIRPLAPTYPSCFLP*GRHWRP
Trigger: GGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGA...GGGGTAGGTGGGTGCAAGAGGACGAATTATGGGGACTATCCAACTGTAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGGGAAGGGGCTGCCCTTCTTGCTTCTaGCCATTGGGCAGGCATTGG +
Preference number: 5 (lower is better)
Translates to: DQCLEPTDGCWAAKEGRGCPSCF*PLGRHW
Trigger: CCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGCA...GCCCCTTCCCTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp CTGAAATCAGAGCTGGGACACAGCGCACCAGAAGCTAAAGTCTTGATGCCATCATTTCAAGGCTCTGGCTaGGGCTCAAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LKSELGHSAPEAKVLMPSFQGSG*GSSLQG
Trigger: CCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA...TGATGGCATCAAGACTTTAGCTTCTGGTGCGCTGTGTCCCAGCTCTGATTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGACGCTGCAAAGGGAAGTaGGCAATGGGATGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGRCKGK*AMGCAA
Trigger: GGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCG...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAGAGCCAGCGGGACTTaGGGCAAGGGACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QRILTTDSERELFYLGISRASGT*GKGQKL
Trigger: CAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CAGGGAAGGAACTCTCCGGTCCACCATGGAGTACCTCTCAGCTCTGAACCCCAGGTGACTTTCAAGGACTaGGCCCAAAGAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: QGRNSPVHHGVPLSSEPQVTFKD*AQRKYS
Trigger: TGAGTACTTTCTTTGGGCCAAGTCCTTGAAAGTCAC...CTGGGGTTCAGAGCTGAGAGGTACTCCATGGTGGACCGGAGAGTTCCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CCATCAAAGGACATCCCTGCCCCATTCACATCTCTGTCACGTCCACTAATCGGCACTTCTGGAGAACTCTaGAGGGTGTGGGAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: PSKDIPAPFTSLSRPLIGTSGEL*RVWEVR
Trigger: CCTCACTTCCCACACCCTCAAGAGTTCTCCAGAAGT...GCCGATTAGTGGACGTGACAGAGATGTGAATGGGGCAGGGATGTCCTTTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAACCCTCCCCTTGGACTTaGCCCTTCTTACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKPSPWT*PFLLAR
Trigger: CCTGGCCAGTAAGAAGGGCAAAGTCCAAGGGGAGGG...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTTTCAAGGCTCTGGCTaGGGCTCAAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLFQGSG*GSSLQG
Trigger: CCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGAATGCCCGCCTCCGCTaGGCCACCGCACCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGNARLR*ATAPCC
Trigger: GCAGCAGGGTGCGGTGGCCAAGCGGAGGCGGGCATT...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CAA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGCAGGGAGCTCCTTCGTaGGACCTCCACACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQQGAPS*DLHTAA
Trigger: TGCAGCAGTGTGGAGGTCCAACGAAGGAGCTCCCTG...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACGGAGGAGTTGTGGAATaGTCAAGGATGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: AQACRGNATGQVTGQSSYGGVVE*SRMSHS
Trigger: ACTGTGTGACATCCTTGACAATTCCACAACTCCTCC...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCCAGGTGCAGGAGGAGTaGTGGAATTGTCAAGGATGT +
Preference number: 5 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLQVQEE*WNCQGC
Trigger: ACATCCTTGACAATTCCACAACTCCTCCTGCACCTG...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTGCCATTGGGCAGGCATaGGAGACCCTACTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAAAIGQA*ETLLLN
Trigger: ATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGC...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp AGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGAGCCATTGGGCAGGCATaGGAGACCCTACTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SAGKSKWDIDQCLEPTDGAIGQA*ETLLLN
Trigger: ATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGC...TCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp TGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAAGAGTCTTGCTTCTTGCCATaGGGCAGGCATTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: WDIDQCLEPTDGCWAAKESCFLP*GRHWRP
Trigger: GGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGA...CTCTTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp TCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTTGCCCTTCTTGCTTCTaGCCATTGGGCAGGCATTGG +
Preference number: 5 (lower is better)
Translates to: SKWDIDQCLEPTDGCWAACPSCF*PLGRHW
Trigger: CCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGCA...AGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTTTTCAAGGCTCTGGCTaGGGCTCAAGCCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTFQGSG*GSSLQG
Trigger: CCCCTGCAGGCTTGAGCCCAAGCCAGAGCCTTGAAA...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CATAACGCCTCACATCCCAAGTCTATACCCTTACCTGAAGAATGCTGTTCTTTCAGAGCCAGCGGGACTTaGGGCAAGGGACAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HNASHPKSIPLPEECCSFRASGT*GKGQKL
Trigger: CAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCT...GAAAGAACAGCATTCTTCAGGTAAGGGTATAGACTTGGGATGTGAGGCGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGGCCTGGGCCATATGTaGCTGGGAATTTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCGLGHM*LGISST
Trigger: GGTGGAGGAAATTCCCAGCAACATATGGCCCAGGCC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGCCATTGGGCAGGCATaGGAGACCCTACTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: QSAGKSKWDIDQCLEPTDAIGQA*ETLLLN
Trigger: ATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGC...ATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp GCAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAATGCCCTTCTTGCTTCTaGCCATTGGGCAGGCATTGG +
Preference number: 5 (lower is better)
Translates to: AGGVVELSRMSHSGQKVQCPSCF*PLGRHW
Trigger: CCAATGCCTGCCCAATGGCAAGAAGCAAGAAGGGCA...TTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTGGCCAGAGTCCAGGCTaGACTCATTCCCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCGQSPG*THSHLV
Trigger: GACAAGGTGGGAATGAGTCAAGCCTGGACTCTGGCC...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp AAGTGGGACATCGACCAATGTCTAGAGCCAACTGATGGATGTTGGGCAGCTAAACCCTCATCCCTCCCCTaGGACTTTGCCCTTCTTACT +
Preference number: 5 (lower is better)
Translates to: KWDIDQCLEPTDGCWAAKPSSLP*DFALLT
Trigger: AGTAAGAAGGGCAAAGTCCAAGGGGAGGGATGAGGG...TTTAGCTGCCCAACATCCATCAGTTGGCTCTAGACATTGGTCGATGTCCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACAGGGATTGTGTTCATTaGAGGGTTTCACTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: AQACRGNATGQVTGQSSYRDCVH*RVSLSV
Trigger: CACTGACAGTGAAACCCTCAAATGAACACAATCCCT...GTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAAGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQAGKQG*CSFEGF
Trigger: GAAACCCTCAAATGAACACAATCCCTGCTTTCCTGC...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GGGCTCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTTCCTTCATTATATaGTGCACCATCAGATCTCGT +
Preference number: 5 (lower is better)
Translates to: GLKPAGEMQLARSQGNQVTSFII*CTIRSR
Trigger: ACGAGATCTGATGGTGCACAATATAATGAAGGAAGT...AACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TCTCGCCGCTTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTGGCCGACTTCCTTCATTATATaGTGCACCATCAGATCTCGT +
Preference number: 5 (lower is better)
Translates to: SRRFRKVVKATFRATWWPTSFII*CTIRSR
Trigger: ACGAGATCTGATGGTGCACAATATAATGAAGGAAGT...CGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAAGCGGCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp TATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACTTCTTGCTTCTTGCCATaGGGCAGGCATTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: YQSAGKSKWDIDQCLEPTSCFLP*GRHWRP
Trigger: GGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGA...AGTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000557362.1
ENST00000644840.2
ENST00000646863.1
CDS-3UTR CAA 90 bp GGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGCTTCTTGCTTCTTGCCATaGGGCAGGCATTGGAGACCC +
Preference number: 5 (lower is better)
Translates to: GSHLPSQHMSSPKTHIQASCFLP*GRHWRP
Trigger: GGGTCTCCAATGCCTGCCCAATGGCAAGAAGCAAGA...AGCTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTCTAGAGCCAACACTTCTGGAGAACTCTaGAGGGTGTGGGAAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VSKCRKVKVGHRPMSRANTSGEL*RVWEVR
Trigger: CCTCACTTCCCACACCCTCAAGAGTTCTCCAGAAGT...GTTGGCTCTAGACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp AGGCCCAAGCACAGCAAGGACATCGCCCGATTCACCTTTGACGTGTACAAGCAACCAGAAGCTAAAGTCTaGATGCCATCAAAGGACATC +
Preference number: 5 (lower is better)
Translates to: RPKHSKDIARFTFDVYKQPEAKV*MPSKDI
Trigger: GATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGG...TTGCTTGTACACGTCAAAGGTGAATCGGGCGATGTCCTTGCTGTGCTTGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp TCAAGCCTGCAGGGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCCCAGAAGCTAAAGTCTaGATGCCATCAAAGGACATC +
Preference number: 5 (lower is better)
Translates to: SSLQGKCNWPGHRAIKLLPEAKV*MPSKDI
Trigger: GATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGG...GAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCCCTGCAGGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 90 bp TGCAGCATCTCACTGCCAGTCCTGTTCGTGGACAAAGCTAGGGCCTaGGTCTCTACTTCCTTCATTATATTGTGCACCATCAGATCTCGT +
Preference number: 5 (lower is better)
Translates to: CSISLPVLFVDKARA*VSTSFIILCTIRSR
Trigger: ACGAGATCTGATGGTGCACAATATAATGAAGGAAGTAGAGACTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCAGTGAGATGCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CAA 90 bp GCCCTCCCCCATCAACACCCAGTCCCAGATCCAAAGCCTCAGTCTTCAAGTATGACTTCCTTCATTATATaGTGCACCATCAGATCTCGT +
Preference number: 5 (lower is better)
Translates to: ALPHQHPVPDPKPQSSSMTSFII*CTIRSR
Trigger: ACGAGATCTGATGGTGCACAATATAATGAAGGAAGT...CATACTTGAAGACTGAGGCTTTGGATCTGGGACTGGGTGTTGATGGGGGAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS-3UTR CAA 90 bp AGCTTCTGCCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCAGTGACTTTCAAGGACTaGGCCCAAAGAAAGTACTCA +
Preference number: 5 (lower is better)
Translates to: SFCPQNHSNRPTAKTMTAVTFKD*AQRKYS
Trigger: TGAGTACTTTCTTTGGGCCAAGTCCTTGAAAGTCAC...TGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGGCAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CCTACTGCTGAATGGAGTGCTAACCCTGGTGCTAGAGGAGGATGGAACTGCAGTTCAAACCTTGGGAAGTaGTTCAACCTACCAAAACCT +
Preference number: 5 (lower is better)
Translates to: PTAEWSANPGARGGWNCSSNLGK*FNLPKP
Trigger: AGGTTTTGGTAGGTTGAACAACTTCCCAAGGTTTGA...ACTGCAGTTCCATCCTCCTCTAGCACCAGGGTTAGCACTCCATTCAGCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CATAACGCCTCACATCCCAAGTCTATACCCTTACCTGAAGAATGCTGTTCTTTCCCCTCATCCCTCCCCTaGGACTTTGCCCTTCTTACT +
Preference number: 5 (lower is better)
Translates to: HNASHPKSIPLPEECCSFPSSLP*DFALLT
Trigger: AGTAAGAAGGGCAAAGTCCAAGGGGAGGGATGAGGG...GAAAGAACAGCATTCTTCAGGTAAGGGTATAGACTTGGGATGTGAGGCGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAAGCTCCAATGGCTTTaGCCAGGCAATTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: QRILTTDSERELFYLGISKLQWL*PGNSSS
Trigger: GGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCTT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCA +
Preference number: 5 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGRGSGV*GAPTPA
Trigger: TGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCT...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS-3UTR CAA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGTGCAGGAGGAGTaGTGGAATTGTCAAGGATGT +
Preference number: 5 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCQVQEE*WNCQGC
Trigger: ACATCCTTGACAATTCCACAACTCCTCCTGCACCTG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGGAGGAGTTGTGGAATTGTCAAGGATGTCACACAGTGGACAGAAAGTCCAAGGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: QEELWNCQGCHTVDRKSKAGKQG*CSFEGF
Trigger: GAAACCCTCAAATGAACACAATCCCTGCTTTCCTGC...CTTGGACTTTCTGTCCACTGTGTGACATCCTTGACAATTCCACAACTCCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: QRILTTDSERELFYLGISAGKQG*CSFEGF
Trigger: GAAACCCTCAAATGAACACAATCCCTGCTTTCCTGC...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp ACCTTTAGGAGGTATCAAAGTGCCGGAAAGTCAAAGTGGGACATCGACCAATGTGGAGGAGTTGTGGAATaGTCAAGGATGTCACACAGT +
Preference number: 5 (lower is better)
Translates to: TFRRYQSAGKSKWDIDQCGGVVE*SRMSHS
Trigger: ACTGTGTGACATCCTTGACAATTCCACAACTCCTCC...ACATTGGTCGATGTCCCACTTTGACTTTCCGGCACTTTGATACCTCCTAAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp ATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGGTGGCCATTGGGCAGGCATaGGAGACCCTACTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: IFTTKTSDSNLNQERDGVAIGQA*ETLLLN
Trigger: ATTCAGCAGTAGGGTCTCCAATGCCTGCCCAATGGC...CACCCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp ATGGTTCCCATCTACCCTCACAACACATGTCATCACCAAAGACACACATACAAGAAGCTCCAATGGCTTTaGCCAGGCAATTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: MVPIYPHNTCHHQRHTYKKLQWL*PGNSSS
Trigger: GGAGGAAGAATTGCCTGGCAAAAGCCATTGGAGCTT...CTTGTATGTGTGTCTTTGGTGATGACATGTGTTGTGAGGGTAGATGGGAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGCGTATCCTCACAACAGACAGTGAGAGAGAGTTGTTCTACCTGGGTATATCCAGGGATTGTGTTCATTaGAGGGTTTCACTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: QRILTTDSERELFYLGISRDCVH*RVSLSV
Trigger: CACTGACAGTGAAACCCTCAAATGAACACAATCCCT...GGATATACCCAGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGGATACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp AATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCAGGCAGGAAAGCAGGGATaGTGTTCATTTGAGGGTTTC +
Preference number: 5 (lower is better)
Translates to: NATGQVTGQSSYSVFLCQAGKQG*CSFEGF
Trigger: GAAACCCTCAAATGAACACAATCCCTGCTTTCCTGC...CTGACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CCCCCAGAATCATTCCAACCGACCCACTGCAAAGACTATGACAGCATCAAATTTCTCTCTGACTTTACCTaGAGATCTGTCTTCATACCC +
Preference number: 5 (lower is better)
Translates to: PPESFQPTHCKDYDSIKFLSDFT*RSVFIP
Trigger: GGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGAG...AAATTTGATGCTGTCATAGTCTTTGCAGTGGGTCGGTTGGAATGATTCTGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCACTCTCTGACTTTACCTaGAGATCTGTCTTCATACCC +
Preference number: 5 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSLSDFT*RSVFIP
Trigger: GGGTATGAAGACAGATCTCAAGGTAAAGTCAGAGAG...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp GGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGTCCAGAAGCTAAAGTCTaGATGCCATCAAAGGACATC +
Preference number: 5 (lower is better)
Translates to: GNATGQVTGQSSYSVFLCPEAKV*MPSKDI
Trigger: GATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGG...ACAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp CAGGAAAGCAGGGATTGTGTTCATTTGAGGGTTTCACTGTCAGTGAGAGTCTCAAGGGATTGTGTTCATTaGAGGGTTTCACTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: QESRDCVHLRVSLSVRVSRDCVH*RVSLSV
Trigger: CACTGACAGTGAAACCCTCAAATGAACACAATCCCT...TGAGACTCTCACTGACAGTGAAACCCTCAAATGAACACAATCCCTGCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS-3UTR CAA 90 bp GGGAAATGCAACTGGCCAGGTCACAGGGCAATCAAGTTACTCTGTGTTTCTTTGACTTCCTTCATTATATaGTGCACCATCAGATCTCGT +
Preference number: 5 (lower is better)
Translates to: GKCNWPGHRAIKLLCVSLTSFII*CTIRSR
Trigger: ACGAGATCTGATGGTGCACAATATAATGAAGGAAGT...CAAAGAAACACAGAGTAACTTGATTGCCCTGTGACCTGGCCAGTTGCATTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGTCGCCCGATTCACCTTaGACGTGTACAAGCAAAACC +
Preference number: 5 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGSPDSP*TCTSKT
Trigger: GGTTTTGCTTGTACACGTCAAAGGTGAATCGGGCGA...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS-3UTR CAA 90 bp CAAATATTTACCACTAAGACTTCTGACTCCAATTTAAACCAGGAAAGGGATGGGCCAGAAGCTAAAGTCTaGATGCCATCAAAGGACATC +
Preference number: 5 (lower is better)
Translates to: QIFTTKTSDSNLNQERDGPEAKV*MPSKDI
Trigger: GATGTCCTTTGATGGCATCAAGACTTTAGCTTCTGG...CCCATCCCTTTCCTGGTTTAAATTGGAGTCAGAAGTCTTAGTGGTAAATATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS CCA 72 bp TCCCAGAGCTTCCGGGCTCAGGTGCGGGTGCGAATCTaGAGCCGGCTCCGAGCGCCCATCCGGAGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: SQSFRAQVRVRI*SRLRAPIRRRP
Trigger: TGGCCGCCTCCGGATGGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp GCCCGGCGGAAATATCCCAGAGCTTCCGGGCTCAGGTaGGGGTGCGAATCTGGAGCCGGCTCCGAGCGCCCA +
Preference number: 6 (lower is better)
Translates to: ARRKYPRASGLR*GCESGAGSERP
Trigger: TGGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCGCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp AACCGGCGCCCCACCTTGTGTGGAGAGCGCGGACCCTaGCCCATGTGTGCTTCGCGACCTGTCCGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: NRRPTLCGERGP*PMCASRPVRLQ
Trigger: TTGCAGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS CCA 72 bp TTTGCCACCAGCTGGGAACCGGCGCCCCACCTTGTGTaGAGAGCGCGGACCCTGCCCCATGTGTGCTTCGCG +
Preference number: 6 (lower is better)
Translates to: FATSWEPAPHLV*RARTLPHVCFA
Trigger: CGCGAAGCACACATGGGGCAGGGTCCGCGCTCTCCACACAAGGTGGGGCGCCGGTTCCCAGCTGGTGGCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS CCA 72 bp GCACACGGCGGCGCAGCTTGCGCGTCACAGAGGGGCTaGTCAGGATGGCATCGAGCACATGAGAGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: AHGGAACASQRG*SGWHRAHESQR
Trigger: CCGCTGGCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 72 bp CGGAAATATCCCAGAGCTTCCGGGCTCAGGTGCGGGTaGGAATCTGGAGCCGGCTCCGAGCGCCCATCCGGA +
Preference number: 6 (lower is better)
Translates to: RKYPRASGLRCG*ESGAGSERPSG
Trigger: TCCGGATGGGCGCTCGGAGCCGGCTCCAGATTCGCACCCGCACCTGAGCCCGGAAGCTCTGGGATATTTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp GGCTGCGGCCATTGCCACCTGGTGCTCTGCAGGCACTaGCCCCTCCTCCTCCGTCAGTCCATAGTACACCTC +
Preference number: 6 (lower is better)
Translates to: GCGHCHLVLCRH*PLLLRQSIVHL
Trigger: GAGGTGTACTATGGACTGACGGAGGAGGAGGGGGCAGTGCCTGCAGAGCACCAGGTGGCAATGGCCGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp CGACAGGCCCCCACCAGGGCAATGACTACCCCTGGGTaGCCCTGGGCCAATACAGCTTCCAAGACAGGGCTC +
Preference number: 6 (lower is better)
Translates to: RQAPTRAMTTPG*PWANTASKTGL
Trigger: GAGCCCTGTCTTGGAAGCTGTATTGGCCCAGGGCCACCCAGGGGTAGTCATTGCCCTGGTGGGGGCCTGTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000557362.1
ENST00000642262.1
ENST00000644840.2
ENST00000646863.1
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp GGCGCAGCTTGCGCGTCACAGAGGGGCTGGTCAGGATaGCATCGAGCACATGAGAGCCAGCGGGACTTTGGG +
Preference number: 6 (lower is better)
Translates to: GAACASQRGWSG*HRAHESQRDFG
Trigger: CCCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCATCCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 72 bp GTCCCTTTAGGTTCTGCAGCACACGGCGGCGCAGCTTaGGCGTCACAGAGGGGCTGGTCAGGATGGCATCGA +
Preference number: 6 (lower is better)
Translates to: VPLGSAAHGGAA*ASQRGWSGWHR
Trigger: TCGATGCCATCCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGTGCTGCAGAACCTAAAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CAA 72 bp TGTCCCTTTAGGTTCTGCAGCACACGGCGGCGCAGCTaGCGCGTCACAGAGGGGCTGGTCAGGATGGCATCG +
Preference number: 6 (lower is better)
Translates to: CPFRFCSTRRRS*RVTEGLVRMAS
Trigger: CGATGCCATCCTGACCAGCCCCTCTGTGACGCGCAAGCTGCGCCGCCGTGTGCTGCAGAACCTAAAGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CAA 90 bp GGGGCTGGTCAGGATGGCATCGAGCACATGAGAGCCAGCGGGACTTaGGGCAAGGGACAGAAGCTGTGGTCCCGTCAAGGCACCCAGACT +
Preference number: 6 (lower is better)
Translates to: GAGQDGIEHMRASGT*GKGQKLWSRQGTQT
Trigger: AGTCTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCTCATGTGCTCGATGCCATCCTGACCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 72 bp CTTCGCGACCTGTCCGGCTGCAAAAGCTTCCTTAACTaGGGACGGACCTTCGACGTCGCCAAGCGTGCGCCT +
Preference number: 6 (lower is better)
Translates to: LRDLSGCKSFLN*GRTFDVAKRAP
Trigger: AGGCGCACGCTTGGCGACGTCGAAGGTCCGTCCGCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267425.8
ENST00000644840.2
CDS CAA 90 bp TCTGCAGCTGCCCCTGCAAGTGCTCCTCAAAGAGGCTCTGGAGTCTaGGGGGCTCCAACACCAGCAGGACCTGCTCCAGGAGTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SAAAPASAPQRGSGV*GAPTPAGPAPGVWN
Trigger: GTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCCCCCAAGACTCCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 72 bp GACCCTGCCCCATGTGTGCTTCGCGACCTGTCCGGCTaGAAAAGCTTCCTTAACTGCGGACGGACCTTCGAC +
Preference number: 6 (lower is better)
Translates to: DPAPCVLRDLSG*KSFLNCGRTFD
Trigger: GTCGAAGGTCCGTCCGCAGTTAAGGAAGCTTTTGCAGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp CACCTTGTGTGGAGAGCGCGGACCCTGCCCCATGTGTaGTTCGCGACCTGTCCGGCTGCAAAAGCTTCCTTA +
Preference number: 6 (lower is better)
Translates to: HLVWRARTLPHV*FATCPAAKASL
Trigger: TAAGGAAGCTTTTGCAGCCGGACAGGTCGCGAAGCACACATGGGGCAGGGTCCGCGCTCTCCACACAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp GCAATGGGATGTGCAGCCAGGGTCTGCAGCTGCCCCTaGAAGTGCTCCTCAAAGAGGCTCTGGAGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: AMGCAARVCSCP*KCSSKRLWSLG
Trigger: CCCAAGACTCCAGAGCCTCTTTGAGGAGCACTTGCAGGGGCAGCTGCAGACCCTGGCTGCACATCCCATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp TTTCCTTCCGGGCCCTCAAGGCTGCTCCACTCCAGATaGCATCTAGCACACGGCTGCCATGGCGACTACAGG +
Preference number: 6 (lower is better)
Translates to: FPSGPSRLLHSR*HLAHGCHGDYR
Trigger: CCTGTAGTCGCCATGGCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAGCCTTGAGGGCCCGGAAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 72 bp TCGTTCTTCCCCAGTCTCGGGAGCCTCTTTCAATGCTaGCAGCGCCCGGCGGAAATATCCCAGAGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SFFPSLGSLFQC*QRPAEISQSFR
Trigger: CCGGAAGCTCTGGGATATTTCCGCCGGGCGCTGTCAGCATTGAAAGAGGCTCCCGAGACTGGGGAAGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS CCA 72 bp CACAGTGGAATGCCTCCAACAAGAGCTGTAGGACCTTaGCTTGGTAGGCCCCAACTCTGCGACAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: HSGMPPTRAVGP*LGRPQLCDRPP
Trigger: TGGGGGCCTGTCGCAGAGTTGGGGCCTACCAAGCCAAGGTCCTACAGCTCTTGTTGGAGGCATTCCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000557362.1
ENST00000642262.1
ENST00000644840.2
ENST00000646863.1
ENST00000649034.1
ENST00000650565.1
CDS GCA 72 bp AGGCTGCTCCACTCCAGATGGCATCTAGCACACGGCTaGCATGGCGACTACAGGCCAGAGCCACATATTGTC +
Preference number: 6 (lower is better)
Translates to: RLLHSRWHLAHG*HGDYRPEPHIV
Trigger: GACAATATGTGGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGCAGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp GGGGCTCCAACACCAGCAGGACCTGCTCCAGGAGTCTaGAACTCGTCTGATCTCGGAGAAATAGCAGTAGGG +
Preference number: 6 (lower is better)
Translates to: GAPTPAGPAPGV*NSSDLGEIAVG
Trigger: CCCTACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGTGTTGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp AGAGCCAGCGGGACTTTGGGCAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAGACTTCGAAGTACAAG +
Preference number: 6 (lower is better)
Translates to: RASGTLGKGQKL*SRQGTQTSKYK
Trigger: CTTGTACTTCGAAGTCTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTTGCCCAAAGTCCCGCTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 72 bp GAGCAGCCCACACGCGACAAAGCGGTTTCAAGGGACTaGATCCCAACAGTTCCTGCAGCATCTCACTGCCAG +
Preference number: 6 (lower is better)
Translates to: EQPTRDKAVSRD*IPTVPAASHCQ
Trigger: CTGGCAGTGAGATGCTGCAGGAACTGTTGGGATTCAGTCCCTTGAAACCGCTTTGTCGCGTGTGGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp AGCAGCTCAGGGGTAGTGACTGCATCCAGTAAGCGCTaGAAAGGGAAGTTGGCAATGGGATGTGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSGVVTASSKR*KGKLAMGCAAR
Trigger: CCTGGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGCAGTCACTACCCCTGAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp GCTCCACTCCAGATGGCATCTAGCACACGGCTGCCATaGCGACTACAGGCCAGAGCCACATATTGTCCCTTT +
Preference number: 6 (lower is better)
Translates to: APLQMASSTRLP*RLQARATYCPF
Trigger: AAAGGGACAATATGTGGCTCTGGCCTGTAGTCGCCATGGCAGCCGTGTGCTAGATGCCATCTGGAGTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp TTTCCTTCCGGGCCTTTGGGCAAGGGACAGAAGCTGTaGTCCCGTCAAGGCACCCAGACTTCGAAGTACAAG +
Preference number: 6 (lower is better)
Translates to: FPSGPLGKGQKL*SRQGTQTSKYK
Trigger: CTTGTACTTCGAAGTCTGGGTGCCTTGACGGGACCACAGCTTCTGTCCCTTGCCCAAAGGCCCGGAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396802.7
ENST00000642262.1
CDS CAA 72 bp GTAGTGACTGCATCCAGTAAGCGCTGCAAAGGGAAGTaGGCAATGGGATGTGCAGCCAGGGTCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VVTASSKRCKGK*AMGCAARVCSC
Trigger: GCAGCTGCAGACCCTGGCTGCACATCCCATTGCCAACTTCCCTTTGCAGCGCTTACTGGATGCAGTCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 72 bp ACCAGCAGGACCTGCTCCAGGAGTCTGGAACTCGTCTaGTCTCGGAGAAATAGCAGTAGGGGACTGCCATCT +
Preference number: 6 (lower is better)
Translates to: TSRTCSRSLELV*SRRNSSRGLPS
Trigger: AGATGGCAGTCCCCTACTGCTATTTCTCCGAGATCAGACGAGTTCCAGACTCCTGGAGCAGGTCCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp AGTACAAGACCAGGAGTGGAGAAGTGCAGCAGATGCTaGAGCAGTAGAGACCCAAGGACTGTCACATCCCCC +
Preference number: 6 (lower is better)
Translates to: STRPGVEKCSRC*SSRDPRTVTSP
Trigger: GGGGGATGTGACAGTCCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 72 bp AGCAAAGCACTTTGTAATACATGGACCCCGCATCGGTaGCAGGCCACAGTGCGCAAGTTAGAGCGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: SKALCNTWTPHR*QATVRKLERRA
Trigger: TGCTCTGCGCTCTAACTTGCGCACTGTGGCCTGTCACCGATGCGGGGTCCATGTATTACAAAGTGCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS GCA 72 bp CGAAGTACAAGACCAGGAGTGGAGAAGTGCAGCAGATaGTGGAGCAGTAGAGACCCAAGGACTGTCACATCC +
Preference number: 6 (lower is better)
Translates to: RSTRPGVEKCSR*WSSRDPRTVTS
Trigger: GGATGTGACAGTCCTTGGGTCTCTACTGCTCCAGCATCTGCTGCACTTCTCCACTCCTGGTCTTGTACTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp AGGAAGGTAGTCAAGGCCACATTTCGAGCCACATGGTaGCCGAAAGGGTCTCTTATCAGCTCCTGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: RKVVKATFRATW*PKGSLISSWFC
Trigger: GCAGAACCAGGAGCTGATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS GCA 72 bp AGGAACCGCGAGTACTCAGGTAGCCAATCACAGCATTaGAGAGATGAGCGCAAAACTGGGGAAGTTTGCGGT +
Preference number: 6 (lower is better)
Translates to: RNREYSGSQSQH*RDERKTGEVCG
Trigger: ACCGCAAACTTCCCCAGTTTTGCGCTCATCTCTGCAATGCTGTGATTGGCTACCTGAGTACTCGCGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS CCA 72 bp ACAGTTCCTGCAGCATCTCACTGCCAGTCCTGTTCGTaGACAAAGCTAGGGCCTGAGTCTCTACTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: TVPAASHCQSCS*TKLGPESLLPS
Trigger: TGAAGGAAGTAGAGACTCAGGCCCTAGCTTTGTCCACGAACAGGACTGGCAGTGAGATGCTGCAGGAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
CDS CCA 72 bp TTTAGGAAGGTAGTCAAGGCCACATTTCGAGCCACATaGTGGCCGAAAGGGTCTCTTATCAGCTCCTGGTTC +
Preference number: 6 (lower is better)
Translates to: FRKVVKATFRAT*WPKGSLISSWF
Trigger: GAACCAGGAGCTGATAAGAGACCCTTTCGGCCACCATGTGGCTCGAAATGTGGCCTTGACTACCTTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1
CDS TCA 72 bp TGGGGAAGTTTGCGGTGTAAAACCTGTAAAGCCACTTaGAGACAGAAGCTGGAGATCTTATCAGTGATAAAC +
Preference number: 6 (lower is better)
Translates to: WGSLRCKTCKAT*RQKLEILSVIN
Trigger: GTTTATCACTGATAAGATCTCCAGCTTCTGTCTTCAAGTGGCTTTACAGGTTTTACACCGCAAACTTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267425.8
ENST00000396802.7
ENST00000642262.1
ENST00000644840.2
ENST00000649034.1
ENST00000650565.1