Pregenerated sensors for NOP58 (Homo sapiens)
Ensembl gene IDs: ENSG00000055044Ensembl transcript IDs: ENST00000264279.10, ENST00000426814.5, ENST00000433543.2, ENST00000467734.5, ENST00000472050.5, ENST00000478941.1, ENST00000488403.5, ENST00000492740.5
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCAGCTACTGCCAGCGGTTCATGGGCTTCTTTTACTATTTTCTTCAGAACTTTTCCTTTTACTGAATTGTaGTTCAGCATTATGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SATASGSWASFTIFFRTFPFTEL*FSIMLL Trigger: CAGCAACATAATGCTGAAGCACAATTCAGTAAAAGG...AAAAGTTCTGAAGAAAATAGTAAAAGAAGCCCATGAACCGCTGGCAGTAGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| 3UTR-3UTR CAA 90 bp | CCCTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGCTTCAGCATTATGTaGCTGGTTTCCACAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: PSIRAVNAWSLVEHLLLNCFSIM*LVSTGR Trigger: TCTCCCTGTGGAAACCAGCAACATAATGCTGAAGCA...ATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCTACTGCCAGCGGTTCATGGGCTTCTTTTACTATTTTCTTCAGAACTTTTCAGAGCTGTGAATGCTaGGTCCCTTGTAGAACACCT | + |
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Preference number: 3 (lower is better) Translates to: SATASGSWASFTIFFRTFQSCEC*VPCRTP Trigger: AGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTG...AAAAGTTCTGAAGAAAATAGTAAAAGAAGCCCATGAACCGCTGGCAGTAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| 3UTR GCA 72 bp | TGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTaGTTCAGCATTATGTTGCTGGTTTCCACAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CLVPCRTPFTEL*FSIMLLVSTGR Trigger: TCTCCCTGTGGAAACCAGCAACATAATGCTGAAGCACAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| 3UTR GCA 72 bp | CTGCTTATTGATTTTGCCCTCCATCAGAGCTGTGAATaGTTGGTCCCTTGTAGAACACCTTTTACTGAATTG | + |
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Preference number: 3 (lower is better) Translates to: LLIDFALHQSCE*LVPCRTPFTEL Trigger: CAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAGGGCAAAATCAATAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR TCA 90 bp | CTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGACAGCACCAACATGGTaGGGCCGGGTCAGGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LHQSCECLVPCRTPFTELTAPTW*GRVRAP Trigger: CGGCGCCCTGACCCGGCCTCACCATGTTGGTGCTGT...CAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR GCA 90 bp | AGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTGCTTCAGCCGGGCAAAGCACAAATaGGCTCGCCGTCCCGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SCECLVPCRTPFTELCFSRAKHK*ARRPAK Trigger: CTTTGCGGGACGGCGAGCGCATTTGTGCTTTGCCCG...GCTGAAGCACAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR TCA 90 bp | TTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGTATCGAGACAGGCTGTaGGCCAATCCAAGACACATA | + |
|
Preference number: 4 (lower is better) Translates to: FSTWPLIWLCSQLPLQNLYRDRL*ANPRHI Trigger: TATGTGTCTTGGATTGGCTCACAGCCTGTCTCGATA...CAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTCGAGAAATCTGCATaGGCAATAAGCCGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFSTWPLIWLCSQLPLQNFEKSA*AISRAP Trigger: TGGAGCACGGCTTATTGCTCATGCAGATTTCTCGAA...GTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | AGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTGCTTCAGCAGAATCAGAACACGCTaGCTAAACCCTCCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCECLVPCRTPFTELCFSRIRTR*LNPPRC Trigger: ACAGCGTGGAGGGTTTAGGCAGCGTGTTCTGATTCT...GCTGAAGCACAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR GCA 90 bp | CTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTTTAGCATCAGCTACTaGCAGCGGTTCATGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQSCECLVPCRTPFTELFSISY*QRFMGF Trigger: GAAGCCCATGAACCGCTGGCAGTAGCTGATGCTAAA...CAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR TCA 90 bp | TGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTCACAACCTCTGTTCCCATTaGTATCTCTGCAGCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPLIWLCSQLPLQNLNPHNLCSH*YLCSCF Trigger: AAAGCAGCTGCAGAGATATCAATGGGAACAGAGGTT...GTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTCCCATTGCAGAACTTaGATCCTCACCAAAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KFSTWPLIWLCSQLPLQNSHCRT*ILTKSI Trigger: GATGCTTTTGGTGAGGATTCAAGTTCTGCAATGGGA...GTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATGCTTCAGCATTATGTTaGTGGTTTCCACAGGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: PSIRAVNAWSLVEHLLLNASALC*WFPQGD Trigger: ATCTCCCTGTGGAAACCAGCAACATAATGCTGAAGC...ATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR CCA 90 bp | TCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATGCAACTCAGAAAGCTTaGCAGAGGCATAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: STWPLIWLCSQLPLQNLNATQKA*QRHSSS Trigger: GGAAGAACTATGCCTCTGCCAAGCTTTCTGAGTTGC...ATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAAACCTGGCCTCTAATTTaGCTCTGTTCTCAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVLNLASNLALFSTPIAETWPLI*LCSQLP Trigger: TGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGT...TTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CCA 90 bp | TCAGCTACTGCCAGCGGTTCATGGGCTTCTTTTACTATTTTCTTCAGAACTTTTACCTCTCCTCACACATaGGGAAAACCAGCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SATASGSWASFTIFFRTFTSPHT*GKPALL Trigger: TAGCAGGGCTGGTTTTCCCCATGTGTGAGGAGAGGT...AAAAGTTCTGAAGAAAATAGTAAAAGAAGCCCATGAACCGCTGGCAGTAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR CCA 90 bp | CCCTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATAGAGCTGTGAATGCTTaGTCCCTTGTAGAACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSIRAVNAWSLVEHLLLNRAVNA*SLVEHL Trigger: AAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCT...ATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR GCA 90 bp | ACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTGACTGTAACATTGGGTaGAATGGCCATCATTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: TWPLIWLCSQLPLQNLNPDCNIG*NGHHSI Trigger: AATCGAATGATGGCCATTGCACCCAATGTTACAGTC...AGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAAAGCATTCGAGAAATCTaGATGAGCAATAAGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVLNLASNLALFSTPIAESIREI*MSNKPC Trigger: GCACGGCTTATTGCTCATGCAGATTTCTCGAATGCT...TTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACAAAACGGTTTTGGCTaGCAGCATTCGAGAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVLNLASNLALFSTPIAEQNGFG*QHSRNL Trigger: CAGATTTCTCGAATGCTGGCAGCCAAAACCGTTTTG...TTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTCACTGCTTCAACTTCTTCTaGCAGCAACTCAGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WPLIWLCSQLPLQNLNPHCFNFF*QQLRKL Trigger: AAGCTTTCTGAGTTGCTGCCAGAAGAAGTTGAAGCA...GTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | TTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGTTTCAATCACCTGGGTaGAAAGATGCAGAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSTWPLIWLCSQLPLQNLFQSPG*KDAEYC Trigger: GCAATATTCTGCATCTTTGCACCCAGGTGATTGAAA...CAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CCA 90 bp | CTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGACTGCCAGCGGTTCATaGGCTTCTTTTACTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHQSCECLVPCRTPFTELTASGS*ASFTIF Trigger: GAAAATAGTAAAAGAAGCCCATGAACCGCTGGCAGT...CAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR CCA 90 bp | AAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACGAGATTTCAATCACCTaGGTGCAAAGATGCAGAATA | + |
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Preference number: 4 (lower is better) Translates to: KFSTWPLIWLCSQLPLQNEISIT*VQRCRI Trigger: TATTCTGCATCTTTGCACCCAGGTGATTGAAATCTC...GTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | TCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTCACCAAAAAGCTGCTTTCACTTCTaGTTCAACTTCTTCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SNLALFSTPIAELESSPKSCFHF*FNFFWQ Trigger: CTGCCAGAAGAAGTTGAAGCAGAAGTGAAAGCAGCT...TTTTGGTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | TTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGACCTGGGTGCAAAGATaGAGAATATTGCAAATATCT | + |
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Preference number: 4 (lower is better) Translates to: FSTWPLIWLCSQLPLQNLTWVQR*RILQIS Trigger: AGATATTTGCAATATTCTGCATCTTTGCACCCAGGT...CAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR TCA 90 bp | CTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGGACTATGGATACAACTaGGATTCAGCTTTTCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: LHQSCECLVPCRTPFTELDYGYN*DSAFPL Trigger: TAAAGGAAAAGCTGAATCTCAGTTGTATCCATAGTC...CAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR TCA 90 bp | AAAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAAAACAAGGAAATTGCCTaGACAATCATTGTGTCTACT | + |
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Preference number: 4 (lower is better) Translates to: KVLNLASNLALFSTPIAENKEIA*TIIVST Trigger: AGTAGACACAATGATTGTTCAGGCAATTTCCTTGTT...TTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR GCA 90 bp | AGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTGCTTCAGCCCTTTTACTGAATTGTaGTTCAGCATTATGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SCECLVPCRTPFTELCFSPFTEL*FSIMLL Trigger: CAGCAACATAATGCTGAAGCACAATTCAGTAAAAGG...GCTGAAGCACAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS GCA 90 bp | CGCGGCCTCAAAAGGCCTCCTAGGCCGCGGCGGGCAAAGCACAAATaGGCTCGCCGTCCCGCAAAGAATCAGAACACGCTGCCTAAACCC | + |
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Preference number: 5 (lower is better) Translates to: RGLKRPPRPRRAKHK*ARRPAKNQNTLPKP Trigger: GGGTTTAGGCAGCGTGTTCTGATTCTTTGCGGGACGGCGAGCGCATTTGTGCTTTGCCCGCCGCGGCCTAGGAGGCCTTTTGAGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264279.10 ENST00000426814.5 ENST00000467734.5 ENST00000472050.5 ENST00000488403.5 ENST00000492740.5 |
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| CDS GCA 90 bp | CAAAGCACAAATGCGCTCGCCGTCCCGCAAAGAATCAGAACACGCTaGCTAAACCCTCCACGCTGTACTGGAACTAGGACGCACGAACGC | + |
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Preference number: 5 (lower is better) Translates to: QSTNALAVPQRIRTR*LNPPRCTGTRTHER Trigger: GCGTTCGTGCGTCCTAGTTCCAGTACAGCGTGGAGGGTTTAGGCAGCGTGTTCTGATTCTTTGCGGGACGGCGAGCGCATTTGTGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426814.5 ENST00000488403.5 |
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| CDS-3UTR CAA 90 bp | AAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACAACCTGGCCTCTAATTaGGCTCTGTTCTCAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: KFSTWPLIWLCSQLPLQNNLASN*ALFSTP Trigger: GGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTT...GTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATAGCTGCTTATTGATTTaGCCCTCCATCAGAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: PSIRAVNAWSLVEHLLLNSCLLI*PSIRAV Trigger: CACAGCTCTGATGGAGGGCAAAATCAATAAGCAGCT...ATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR CAA 90 bp | CATCAGAGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTGCCAGAGCTGTGAATGCTaGGTCCCTTGTAGAACACCT | + |
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Preference number: 5 (lower is better) Translates to: HQSCECLVPCRTPFTELCQSCEC*VPCRTP Trigger: AGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTG...GCACAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCTCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR CAA 90 bp | AAGTTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACAAACCTCTGTTCCCATaGATATCTCTGCAGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: KFSTWPLIWLCSQLPLQNKPLFP*ISLQLL Trigger: AAGCAGCTGCAGAGATATCAATGGGAACAGAGGTTT...GTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CAA 90 bp | ACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTCTCCCATTGCAGAACTaGAATCCTCACCAAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: TWPLIWLCSQLPLQNLNPLPLQN*NPHQKH Trigger: ATGCTTTTGGTGAGGATTCAAGTTCTGCAATGGGAG...AGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CAA 90 bp | TGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTCACTGTTCTCAACTCCCATaGCAGAACTTGAATCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: WPLIWLCSQLPLQNLNPHCSQLP*QNLNPH Trigger: GTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACA...GTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CAA 90 bp | AGCTGTGAATGCTTGGTCCCTTGTAGAACACCTTTTACTGAATTGTGCTTCAGCTGCTTCAGCATTATGTaGCTGGTTTCCACAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SCECLVPCRTPFTELCFSCFSIM*LVSTGR Trigger: TCTCCCTGTGGAAACCAGCAACATAATGCTGAAGCA...GCTGAAGCACAATTCAGTAAAAGGTGTTCTACAAGGGACCAAGCATTCACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS-3UTR CAA 90 bp | TCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATACCATGACTGTAACATaGGGTGCAATGGCCATCATT | + |
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Preference number: 5 (lower is better) Translates to: STWPLIWLCSQLPLQNLNTMTVT*GAMAII Trigger: AATGATGGCCATTGCACCCAATGTTACAGTCATGGT...ATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS CCA 90 bp | GGAAGACACGAAGACAAATGTGTTCCTACTGACAGCAATCACATTTaGTACTATCCGAGGTTTAAAGTATCCACAGGGTCTTCTGGAACA | + |
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Preference number: 5 (lower is better) Translates to: GRHEDKCVPTDSNHI*YYPRFKVSTGSSGT Trigger: TGTTCCAGAAGACCCTGTGGATACTTTAAACCTCGGATAGTACCAAATGTGATTGCTGTCAGTAGGAACACATTTGTCTTCGTGTCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492740.5 |
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| CDS-3UTR CAA 90 bp | TCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGAATCCTCACCAAAAATAGCCAAAACGGTTTaGGCTGCCAGCATTCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SNLALFSTPIAELESSPKIAKTV*AASIRE Trigger: TTCTCGAATGCTGGCAGCCAAAACCGTTTTGGCTAT...TTTTGGTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CAA 90 bp | TTCTCAACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATTGCAGAACTTGCATCTAACAAGGAAATaGCCTGAACAATCATTGTGT | + |
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Preference number: 5 (lower is better) Translates to: FSTWPLIWLCSQLPLQNLHLTRK*PEQSLC Trigger: ACACAATGATTGTTCAGGCAATTTCCTTGTTAGATG...CAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGTTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433543.2 |
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| CDS-3UTR CAA 90 bp | TCAGCTACTGCCAGCGGTTCATGGGCTTCTTTTACTATTTTCTTCAGAACTTTTTTTTTCAGCTGCTTATaGATTTTGCCCTCCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: SATASGSWASFTIFFRTFFFSCL*ILPSIR Trigger: TCTGATGGAGGGCAAAATCAATAAGCAGCTGAAAAA...AAAAGTTCTGAAGAAAATAGTAAAAGAAGCCCATGAACCGCTGGCAGTAGCTGA 40% GC, longest homopolymer 9 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS TCA 90 bp | CACTTACCAGCTGTATTGACCTTGGGCTTCAGTTTCATCTGTAAATaGGGATATTACTATCATCTTCTTCATAAGGTTCTGATGTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: HLPAVLTLGFSFICK*GYYYHLLHKVLMWF Trigger: GAACCACATCAGAACCTTATGAAGAAGATGATAGTAATATCCTCATTTACAGATGAAACTGAAGCCCAAGGTCAATACAGCTGGTAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488403.5 |
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| CDS-3UTR CAA 90 bp | TCAGCTACTGCCAGCGGTTCATGGGCTTCTTTTACTATTTTCTTCAGAACTTTTACACCTTTTACTGAATaGTGCTTCAGCATTATGTTG | + |
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Preference number: 5 (lower is better) Translates to: SATASGSWASFTIFFRTFTPFTE*CFSIML Trigger: CAACATAATGCTGAAGCACAATTCAGTAAAAGGTGT...AAAAGTTCTGAAGAAAATAGTAAAAGAAGCCCATGAACCGCTGGCAGTAGCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000426814.5 |
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| CDS CCA 90 bp | ATTTGTGAACGAATTCCTCTCATAAGTTCATTAACAACAGGACTATaGATACAACTGAGATTCAGCTTTTCCTACAAGAACATGAACATC | + |
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Preference number: 5 (lower is better) Translates to: ICERIPLISSLTTGL*IQLRFSFSYKNMNI Trigger: GATGTTCATGTTCTTGTAGGAAAAGCTGAATCTCAGTTGTATCCATAGTCCTGTTGTTAATGAACTTATGAGAGGAATTCGTTCACAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472050.5 |
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| CDS TCA 72 bp | CGTAACCCACAGACGTTTCAAACAGCACCAACATGGTaGGGCCGGGTCAGGGCGCCGCACGGCCTGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RNPQTFQTAPTW*GRVRAPHGLPE Trigger: TTCTGGCAGGCCGTGCGGCGCCCTGACCCGGCCTCACCATGTTGGTGCTGTTTGAAACGTCTGTGGGTTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000264279.10 ENST00000426814.5 ENST00000467734.5 ENST00000472050.5 ENST00000488403.5 ENST00000492740.5 |
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| CDS GCA 72 bp | AAAAGGCCTCCTAGGCCGCGGCGGGCAAAGCACAAATaGGCTCGCCGTCCCGCAAAGAATCAGAACACGCTG | + |
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Preference number: 6 (lower is better) Translates to: KRPPRPRRAKHK*ARRPAKNQNTL Trigger: CAGCGTGTTCTGATTCTTTGCGGGACGGCGAGCGCATTTGTGCTTTGCCCGCCGCGGCCTAGGAGGCCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000264279.10 ENST00000426814.5 ENST00000467734.5 ENST00000472050.5 ENST00000488403.5 ENST00000492740.5 |
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| CDS GCA 72 bp | AATGCGCTCGCCGTCCCGCAAAGAATCAGAACACGCTaGCTAAACCCTCCACGCTGTACTGGAACTAGGACG | + |
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Preference number: 6 (lower is better) Translates to: NALAVPQRIRTR*LNPPRCTGTRT Trigger: CGTCCTAGTTCCAGTACAGCGTGGAGGGTTTAGGCAGCGTGTTCTGATTCTTTGCGGGACGGCGAGCGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000426814.5 ENST00000488403.5 |
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| CDS CCA 72 bp | CTGCTTCAACTTCTTCTGGCAGCAACTCAGAAAGCTTaGCAGAGGCATAGTTCTTCCTATCGCCAACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLQLLLAATQKA*QRHSSSYRQLS Trigger: AGAAAGTTGGCGATAGGAAGAACTATGCCTCTGCCAAGCTTTCTGAGTTGCTGCCAGAAGAAGTTGAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264279.10 ENST00000433543.2 |
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| CDS CCA 72 bp | TGGCTGCCAGCATTCGAGAAATCTTTCCTTTGTGTTTaGGACTTGTCTGGCCCACGAGTGAAGCATGATAAA | + |
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Preference number: 6 (lower is better) Translates to: WLPAFEKSFLCV*DLSGPRVKHDK Trigger: TTTATCATGCTTCACTCGTGGGCCAGACAAGTCCCAAACACAAAGGAAAGATTTCTCGAATGCTGGCAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264279.10 |
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| CDS CAA 72 bp | ACCTGGCCTCTAATTTGGCTCTGTTCTCAACTCCCATaGCAGAACTTGAATCCTCACCAAAAGCATCATAAC | + |
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Preference number: 6 (lower is better) Translates to: TWPLIWLCSQLP*QNLNPHQKHHN Trigger: GTTATGATGCTTTTGGTGAGGATTCAAGTTCTGCAATGGGAGTTGAGAACAGAGCCAAATTAGAGGCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264279.10 ENST00000433543.2 |
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| CDS CAA 72 bp | CGTGCTCCAACTAATTCCCCAACCATGACTGTAACATaGGGTGCAATGGCCATCATTCGATTTTGTAGATAT | + |
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Preference number: 6 (lower is better) Translates to: RAPTNSPTMTVT*GAMAIIRFCRY Trigger: ATATCTACAAAATCGAATGATGGCCATTGCACCCAATGTTACAGTCATGGTTGGGGAATTAGTTGGAGCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264279.10 ENST00000433543.2 |
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| CDS CCA 72 bp | CACCTTTTACTGAATTGTGCTTCAGCATTATGTTGCTaGTTTCCACAGGGAGATCAACTTAACCACTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: HLLLNCASALCC*FPQGDQLNHFS Trigger: TGAGAAGTGGTTAAGTTGATCTCCCTGTGGAAACCAGCAACATAATGCTGAAGCACAATTCAGTAAAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426814.5 ENST00000467734.5 ENST00000478941.1 |
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| CDS CCA 72 bp | CGAATTCCTCTCATAAGTTCATTAACAACAGGACTATaGATACAACTGAGATTCAGCTTTTCCTACAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RIPLISSLTTGL*IQLRFSFSYKN Trigger: GTTCTTGTAGGAAAAGCTGAATCTCAGTTGTATCCATAGTCCTGTTGTTAATGAACTTATGAGAGGAATTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472050.5 |
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