Pregenerated sensors for NOP53 (Homo sapiens)
Ensembl gene IDs: ENSG00000105373Ensembl transcript IDs: ENST00000246802.10, ENST00000594525.5, ENST00000598285.1, ENST00000598681.5, ENST00000599253.1, ENST00000599582.1, ENST00000600266.1, ENST00000600410.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCCCCAGCCTTCGGGGCTTGTCAGCCTCAGCCTCCCGCCGCGCCTaGCGCCGCCTCTGCCGCCGCGCCAGCTCCGCCAGCCTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RPSLRGLSASASRRA*RRLCRRASSASLRA Trigger: GGCCCTGAGGCTGGCGGAGCTGGCGCGGCGGCAGAGGCGGCGGCAGGCGCGGCGGGAGGCTGAGGCTGACAAGCCCCGAAGGCTGGGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000246802.10 ENST00000598681.5 ENST00000600410.5 |
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| CDS CCA 90 bp | TTGCACTGGACCGTGAGCCCCGTTGCGGACAGGCCCAGGGCTGTCTaGGTCATTGGAGTTCCCAGCACAGGGAGGAAGCTAGTGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LHWTVSPVADRPRAV*VIGVPSTGRKLVKA Trigger: GGCCTTCACTAGCTTCCTCCCTGTGCTGGGAACTCCAATGACCCAGACAGCCCTGGGCCTGTCCGCAACGGGGCTCACGGTCCAGTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 90 bp | TCACTGTCTGGGAACAGGTCTCTTGCACTGGACCGTGAGCCCCGTTaGGGACAGGCCCAGGGCTGTCTGGGTCATTGGAGTTCCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SLSGNRSLALDREPR*GQAQGCLGHWSSQH Trigger: GTGCTGGGAACTCCAATGACCCAGACAGCCCTGGGCCTGTCCGCAACGGGGCTCACGGTCCAGTGCAAGAGACCTGTTCCCAGACAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 90 bp | CAGGCTTCCTGGAAGGCGCCACGGTCTCTCTCAACTCTGTGCCTTTaGAGTGCTGTTCCCACCACCTGGAAAACCCACTCCCCTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: QASWKAPRSLSTLCL*SAVPTTWKTHSPPP Trigger: GGGAGGAGGGGAGTGGGTTTTCCAGGTGGTGGGAACAGCACTGCAAAGGCACAGAGTTGAGAGAGACCGTGGCGCCTTCCAGGAAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 90 bp | AGCACGAGTGGGAAACGGCCGCCCCTTCAGGACGCACGACTCTGCTaGGAGGTCACCAAAGCACCCACAAAGCACTCCCTTTCACACTGT | + |
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Preference number: 5 (lower is better) Translates to: STSGKRPPLQDARLC*EVTKAPTKHSLSHC Trigger: ACAGTGTGAAAGGGAGTGCTTTGTGGGTGCTTTGGTGACCTCCCAGCAGAGTCGTGCGTCCTGAAGGGGCGGCCGTTTCCCACTCGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS GCA 90 bp | AAAAGCACGAGTGGGAAACGGCCGCCCCTTCAGGACGCACGACTCTaGTGGGAGGTCACCAAAGCACCCACAAAGCACTCCCTTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: KSTSGKRPPLQDARL*WEVTKAPTKHSLSH Trigger: GTGTGAAAGGGAGTGCTTTGTGGGTGCTTTGGTGACCTCCCAGCAGAGTCGTGCGTCCTGAAGGGGCGGCCGTTTCCCACTCGTGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS GCA 90 bp | TTGGCTGCCAGTGTGCCACCGTGTCACCACAGCCTTTTTCATCTCTaGCCCACAGGCTTCCTGGAAGGCGCCACGGTCTCTCTCAACTCT | + |
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Preference number: 5 (lower is better) Translates to: LAASVPPCHHSLFHL*PTGFLEGATVSLNS Trigger: AGAGTTGAGAGAGACCGTGGCGCCTTCCAGGAAGCCTGTGGGGCAGAGATGAAAAAGGCTGTGGTGACACGGTGGCACACTGGCAGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 90 bp | GCCATCTCTAAGCTGGGCTTAGAGGAGTCACGGGAAGTGGGCTGGTaGCGACACAGAAAAGGGGACAGCGAGGGCAAAGGCTGGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: AISKLGLEESREVGW*RHRKGDSEGKGWIR Trigger: TCTGATCCAGCCTTTGCCCTCGCTGTCCCCTTTTCTGTGTCGTCACCAGCCCACTTCCCGTGACTCCTCTAAGCCCAGCTTAGAGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 90 bp | TCTGAGCTTCAGGAAGGTCCCTCTAGTCCTAAAGGTGACCGGGACTaGAACAGGGACCAGCTGGAAGGAAAGGCCTTCTTAGGGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SELQEGPSSPKGDRD*NRDQLEGKAFLGSR Trigger: CCGGGACCCTAAGAAGGCCTTTCCTTCCAGCTGGTCCCTGTTGCAGTCCCGGTCACCTTTAGGACTAGAGGGACCTTCCTGAAGCTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 90 bp | CTTCCTTTCCTGAAGCCTCACAACTCAGGAAAGGAAAAGCACGAGTaGGAAACGGCCGCCCCTTCAGGACGCACGACTCTGCTGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: LPFLKPHNSGKEKHE*ETAAPSGRTTLLGG Trigger: ACCTCCCAGCAGAGTCGTGCGTCCTGAAGGGGCGGCCGTTTCCCACTCGTGCTTTTCCTTTCCTGAGTTGTGAGGCTTCAGGAAAGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS TCA 90 bp | GCCCACAGTTTCATCTATGTGAATTGGTCAGGGTGGGCTGGTCCCTaGGACAGGAAGCCTGGCAGCCCAAGACCACACGAGACAGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: AHSFIYVNWSGWAGP*DRKPGSPRPHETGN Trigger: ATTCCCTGTCTCGTGTGGTCTTGGGCTGCCAGGCTTCCTGTCTCAGGGACCAGCCCACCCTGACCAATTCACATAGATGAAACTGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 90 bp | TCTGCTAAATCTGGTAACTCTATCAAGCTCTCCAGCTTCCCATGCTaGGTCCCCTGCCCATGCTCTCCATTTCCTCGGCGGTCCCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: SAKSGNSIKLSSFPC*VPCPCSPFPRRSPG Trigger: TCCCGGGGACCGCCGAGGAAATGGAGAGCATGGGCAGGGGACTCAGCATGGGAAGCTGGAGAGCTTGATAGAGTTACCAGATTTAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599582.1 |
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| CDS TCA 90 bp | CGGTCCTGCATCTACCGCAAACATCTCAGCATCTCTCCAGTCACGTaGCCCCATGAGAAGGGCTGTTCCTTGAGGGAGGGTTGTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RSCIYRKHLSISPVT*PHEKGCSLREGCAC Trigger: ACAAGCACAACCCTCCCTCAAGGAACAGCCCTTCTCATGGGGTCACGTGACTGGAGAGATGCTGAGATGTTTGCGGTAGATGCAGGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 90 bp | GAAGCCTGGCAGCCCAAGACCACACGAGACAGGGAATTGCGGGGGTaGTGGCTGACATGTGTGAGGTTTCCTTTACGGACAGTGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: EAWQPKTTRDRELRG*WLTCVRFPLRTVKM Trigger: CATTTTCACTGTCCGTAAAGGAAACCTCACACATGTCAGCCATCACCCCCGCAATTCCCTGTCTCGTGTGGTCTTGGGCTGCCAGGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 90 bp | TTGTCCACAGCATCTGTGCTCAACAGATGCCCGCTAAATGCACAGTaGCTCCAGCTAGACTTTCCCATCGCTGAGCTAGCCTCGCCCATA | + |
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Preference number: 5 (lower is better) Translates to: LSTASVLNRCPLNAQ*LQLDFPIAELASPI Trigger: TATGGGCGAGGCTAGCTCAGCGATGGGAAAGTCTAGCTGGAGCCACTGTGCATTTAGCGGGCATCTGTTGAGCACAGATGCTGTGGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 90 bp | AAAGCACCCACAAAGCACTCCCTTTCACACTGTACTCTCGTGCAGTaGACAACACACACAAACTGCACATGGCCGTCCTGTCCCCATTCA | + |
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Preference number: 5 (lower is better) Translates to: KAPTKHSLSHCTLVQ*TTHTNCTWPSCPHS Trigger: TGAATGGGGACAGGACGGCCATGTGCAGTTTGTGTGTGTTGTGCACTGCACGAGAGTACAGTGTGAAAGGGAGTGCTTTGTGGGTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS TCA 90 bp | CGGGTTCAGAAAGTGGAAGAGACCAAAGCTGAAGGCTTCCTTTCCTaGAGCCTCACAACTCAGGAAAGGAAAAGCACGAGTGGGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: RVQKVEETKAEGFLS*SLTTQERKSTSGKR Trigger: CCGTTTCCCACTCGTGCTTTTCCTTTCCTGAGTTGTGAGGCTTCAGGAAAGGAAGCCTTCAGCTTTGGTCTCTTCCACTTTCTGAACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS TCA 90 bp | CAAAACTGTGTCTGGACGGGTTCAGAAAGTGGAAGAGACCAAAGCTaGAGGCTTCCTTTCCTGAAGCCTCACAACTCAGGAAAGGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: QNCVWTGSESGRDQS*RLPFLKPHNSGKEK Trigger: CTTTTCCTTTCCTGAGTTGTGAGGCTTCAGGAAAGGAAGCCTTCAGCTTTGGTCTCTTCCACTTTCTGAACCCGTCCAGACACAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS CCA 90 bp | TCACTAAAAGCCACTGAATCACATACTCTAACTAGGCTGACCGTATaGTTAAGTGAATTTTATCTCTACGAAGTAGTTCTGTACAAATCT | + |
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Preference number: 5 (lower is better) Translates to: SLKATESHTLTRLTV*LSEFYLYEVVLYKS Trigger: AGATTTGTACAGAACTACTTCGTAGAGATAAAATTCACTTAACCATACGGTCAGCCTAGTTAGAGTATGTGATTCAGTGGCTTTTAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | GGGAGAAGGCACAGTCCGCTCATGAGCACAACTGGCTaGAGCCCCACGGCCGGGTCGGCCCAGGCGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRRHSPLMSTTG*SPTAGSAQACG Trigger: GCCACACGCCTGGGCCGACCCGGCCGTGGGGCTCCAGCCAGTTGTGCTCATGAGCGGACTGTGCCTTCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | CTTATTTCTTGGGCCTCGCCGCCGCCGCCTCAGCGCTaGGTCCACCGAAGTGGGCCGCAGCCCCAGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: LISWASPPPPQR*VHRSGPQPQET Trigger: GGTTTCCTGGGGCTGCGGCCCACTTCGGTGGACCCAGCGCTGAGGCGGCGGCGGCGAGGCCCAAGAAATAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000246802.10 ENST00000594525.5 ENST00000598681.5 ENST00000599253.1 ENST00000600410.5 |
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| CDS CAA 90 bp | CCCAGCCCCAACCACTCTGCCCATCACTGTCTGGGAACAGGTCTCTaGCACTGGACCGTGAGCCCCGTTGCGGACAGGCCCAGGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PSPNHSAHHCLGTGL*HWTVSPVADRPRAV Trigger: GACAGCCCTGGGCCTGTCCGCAACGGGGCTCACGGTCCAGTGCAAGAGACCTGTTCCCAGACAGTGATGGGCAGAGTGGTTGGGGCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 72 bp | ATCACTGTCTGGGAACAGGTCTCTTGCACTGGACCGTaGGCCCCGTTGCGGACAGGCCCAGGGCTGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ITVWEQVSCTGP*APLRTGPGLSG Trigger: CCCAGACAGCCCTGGGCCTGTCCGCAACGGGGCTCACGGTCCAGTGCAAGAGACCTGTTCCCAGACAGTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | CCCCGTTGCGGACAGGCCCAGGGCTGTCTGGGTCATTaGAGTTCCCAGCACAGGGAGGAAGCTAGTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PRCGQAQGCLGH*SSQHREEASEG Trigger: GCCTTCACTAGCTTCCTCCCTGTGCTGGGAACTCCAATGACCCAGACAGCCCTGGGCCTGTCCGCAACGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | TCTGCCCATCACTGTCTGGGAACAGGTCTCTTGCACTaGACCGTGAGCCCCGTTGCGGACAGGCCCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SAHHCLGTGLLH*TVSPVADRPRA Trigger: AGCCCTGGGCCTGTCCGCAACGGGGCTCACGGTCCAGTGCAAGAGACCTGTTCCCAGACAGTGATGGGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | AGTGGGAAACGGCCGCCCCTTCAGGACGCACGACTCTaGTGGGAGGTCACCAAAGCACCCACAAAGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: SGKRPPLQDARL*WEVTKAPTKHS Trigger: GGAGTGCTTTGTGGGTGCTTTGGTGACCTCCCAGCAGAGTCGTGCGTCCTGAAGGGGCGGCCGTTTCCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS CCA 72 bp | GGGAAACGGCCGCCCCTTCAGGACGCACGACTCTGCTaGGAGGTCACCAAAGCACCCACAAAGCACTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GKRPPLQDARLC*EVTKAPTKHSL Trigger: AAGGGAGTGCTTTGTGGGTGCTTTGGTGACCTCCCAGCAGAGTCGTGCGTCCTGAAGGGGCGGCCGTTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS CAA 72 bp | AACCACTCTGCCCATCACTGTCTGGGAACAGGTCTCTaGCACTGGACCGTGAGCCCCGTTGCGGACAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NHSAHHCLGTGL*HWTVSPVADRP Trigger: GGGCCTGTCCGCAACGGGGCTCACGGTCCAGTGCAAGAGACCTGTTCCCAGACAGTGATGGGCAGAGTGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | GGCGCCACGGTCTCTCTCAACTCTGTGCCTTTGCAGTaGTGTTCCCACCACCTGGAAAACCCACTCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GATVSLNSVPLQ*CSHHLENPLPS Trigger: GGAGGGGAGTGGGTTTTCCAGGTGGTGGGAACAGCACTGCAAAGGCACAGAGTTGAGAGAGACCGTGGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | AGGGGCGGGAGTGAGGATGGGTCCCTGAACCCCTCCTaGGACACTGAGACTAGACCCTCTTACCTCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: RGGSEDGSLNPS*DTETRPSYLPS Trigger: AGATGGGAGGTAAGAGGGTCTAGTCTCAGTGTCCCAGGAGGGGTTCAGGGACCCATCCTCACTCCCGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CAA 90 bp | ACAGGCTTCCTGGAAGGCGCCACGGTCTCTCTCAACTCTGTGCCTTaGCAGTGCTGTTCCCACCACCTGGAAAACCCACTCCCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGFLEGATVSLNSVP*QCCSHHLENPLPSS Trigger: GGAGGAGGGGAGTGGGTTTTCCAGGTGGTGGGAACAGCACTGCAAAGGCACAGAGTTGAGAGAGACCGTGGCGCCTTCCAGGAAGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 72 bp | AAGCTGGGCTTAGAGGAGTCACGGGAAGTGGGCTGGTaGCGACACAGAAAAGGGGACAGCGAGGGCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: KLGLEESREVGW*RHRKGDSEGKG Trigger: GCCTTTGCCCTCGCTGTCCCCTTTTCTGTGTCGTCACCAGCCCACTTCCCGTGACTCCTCTAAGCCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | AGTGTGCCACCGTGTCACCACAGCCTTTTTCATCTCTaGCCCACAGGCTTCCTGGAAGGCGCCACGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVPPCHHSLFHL*PTGFLEGATVS Trigger: AGAGACCGTGGCGCCTTCCAGGAAGCCTGTGGGGCAGAGATGAAAAAGGCTGTGGTGACACGGTGGCACACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | TGGAAGGCGCCACGGTCTCTCTCAACTCTGTGCCTTTaGAGTGCTGTTCCCACCACCTGGAAAACCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: WKAPRSLSTLCL*SAVPTTWKTHS Trigger: GGAGTGGGTTTTCCAGGTGGTGGGAACAGCACTGCAAAGGCACAGAGTTGAGAGAGACCGTGGCGCCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | GCTTCCTGGAAGGCGCCACGGTCTCTCTCAACTCTGTaGCTTTGCAGTGCTGTTCCCACCACCTGGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: ASWKAPRSLSTL*LCSAVPTTWKT Trigger: GGTTTTCCAGGTGGTGGGAACAGCACTGCAAAGGCACAGAGTTGAGAGAGACCGTGGCGCCTTCCAGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | CTGAAGCCTCACAACTCAGGAAAGGAAAAGCACGAGTaGGAAACGGCCGCCCCTTCAGGACGCACGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LKPHNSGKEKHE*ETAAPSGRTTL Trigger: CAGAGTCGTGCGTCCTGAAGGGGCGGCCGTTTCCCACTCGTGCTTTTCCTTTCCTGAGTTGTGAGGCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS TCA 72 bp | TCTGGTAACTCTATCAAGCTCTCCAGCTTCCCATGCTaGGTCCCCTGCCCATGCTCTCCATTTCCTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SGNSIKLSSFPC*VPCPCSPFPRR Trigger: CCGCCGAGGAAATGGAGAGCATGGGCAGGGGACTCAGCATGGGAAGCTGGAGAGCTTGATAGAGTTACCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599582.1 |
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| CDS CCA 72 bp | ACCTTGTACTTGCGTTTGAACCTGGAGCAGGGACAATaGAGCAATCAGTGCCCGGGGCCAATCCCAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: TLYLRLNLEQGQ*SNQCPGPIPDA Trigger: GGCATCTGGGATTGGCCCCGGGCACTGATTGCTCCATTGTCCCTGCTCCAGGTTCAAACGCAAGTACAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598285.1 |
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| CDS CCA 72 bp | ACCACAGCCTTTTTCATCTCTGCCCCACAGGCTTCCTaGAAGGCGCCACGGTCTCTCTCAACTCTGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: TTAFFISAPQAS*KAPRSLSTLCL Trigger: AAGGCACAGAGTTGAGAGAGACCGTGGCGCCTTCCAGGAAGCCTGTGGGGCAGAGATGAAAAAGGCTGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | CCACAGTTTCATCTATGTGAATTGGTCAGGGTGGGCTaGTCCCTGAGACAGGAAGCCTGGCAGCCCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: PQFHLCELVRVG*SLRQEAWQPKT Trigger: GGTCTTGGGCTGCCAGGCTTCCTGTCTCAGGGACCAGCCCACCCTGACCAATTCACATAGATGAAACTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 72 bp | CAGCCCAAGACCACACGAGACAGGGAATTGCGGGGGTaGTGGCTGACATGTGTGAGGTTTCCTTTACGGACA | + |
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Preference number: 6 (lower is better) Translates to: QPKTTRDRELRG*WLTCVRFPLRT Trigger: TGTCCGTAAAGGAAACCTCACACATGTCAGCCATCACCCCCGCAATTCCCTGTCTCGTGTGGTCTTGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | GCATCTGTGCTCAACAGATGCCCGCTAAATGCACAGTaGCTCCAGCTAGACTTTCCCATCGCTGAGCTAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASVLNRCPLNAQ*LQLDFPIAELA Trigger: GGCTAGCTCAGCGATGGGAAAGTCTAGCTGGAGCCACTGTGCATTTAGCGGGCATCTGTTGAGCACAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CAA 72 bp | ATCGCTGAGCTAGCCTCGCCCATATATAACTGTCACTaGGCTGCCAGTGTGCCACCGTGTCACCACAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: IAELASPIYNCH*AASVPPCHHSL Trigger: AAGGCTGTGGTGACACGGTGGCACACTGGCAGCCAAGTGACAGTTATATATGGGCGAGGCTAGCTCAGCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 72 bp | CAAACATCTCAGCATCTCTCCAGTCACGTGACCCCATaGGAAGGGCTGTTCCTTGAGGGAGGGTTGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: QTSQHLSSHVTP*EGLFLEGGLCL Trigger: CAAGCACAACCCTCCCTCAAGGAACAGCCCTTCTCATGGGGTCACGTGACTGGAGAGATGCTGAGATGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 72 bp | ATCTACCGCAAACATCTCAGCATCTCTCCAGTCACGTaGCCCCATGAGAAGGGCTGTTCCTTGAGGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: IYRKHLSISPVT*PHEKGCSLREG Trigger: ACCCTCCCTCAAGGAACAGCCCTTCTCATGGGGTCACGTGACTGGAGAGATGCTGAGATGTTTGCGGTAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | CCTCGCCCATATATAACTGTCACTTGGCTGCCAGTGTaGCACCGTGTCACCACAGCCTTTTTCATCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PRPYITVTWLPV*HRVTTAFFISA Trigger: GGCAGAGATGAAAAAGGCTGTGGTGACACGGTGGCACACTGGCAGCCAAGTGACAGTTATATATGGGCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CAA 90 bp | GACTTTCCCATCGCTGAGCTAGCCTCGCCCATATATAACTGTCACTaGGCTGCCAGTGTGCCACCGTGTCACCACAGCCTTTTTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: DFPIAELASPIYNCH*AASVPPCHHSLFHL Trigger: GAGATGAAAAAGGCTGTGGTGACACGGTGGCACACTGGCAGCCAAGTGACAGTTATATATGGGCGAGGCTAGCTCAGCGATGGGAAAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | ACAAAGCACTCCCTTTCACACTGTACTCTCGTGCAGTaGACAACACACACAAACTGCACATGGCCGTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: TKHSLSHCTLVQ*TTHTNCTWPSC Trigger: ACAGGACGGCCATGTGCAGTTTGTGTGTGTTGTGCACTGCACGAGAGTACAGTGTGAAAGGGAGTGCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600266.1 |
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| CDS GCA 72 bp | TTGTCCCCTTTGTCCACAGCATCTGTGCTCAACAGATaGCCGCTAAATGCACAGTGGCTCCAGCTAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: LSPLSTASVLNR*PLNAQWLQLDF Trigger: AAAGTCTAGCTGGAGCCACTGTGCATTTAGCGGGCATCTGTTGAGCACAGATGCTGTGGACAAAGGGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS TCA 72 bp | AGCTGCCTCTGTTCCTGGCTAGCTATCTCCTTCTTATaGATGCTGAAAACGATTCGGACAAGCGGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SCLCSWLAISFL*MLKTIRTSGPA Trigger: TGCAGGACCGCTTGTCCGAATCGTTTTCAGCATTCATAAGAAGGAGATAGCTAGCCAGGAACAGAGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS GCA 72 bp | CTTATGAATGCTGAAAACGATTCGGACAAGCGGTCCTaGATCTACCGCAAACATCTCAGCATCTCTCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LMNAENDSDKRS*IYRKHLSISPV Trigger: GACTGGAGAGATGCTGAGATGTTTGCGGTAGATGCAGGACCGCTTGTCCGAATCGTTTTCAGCATTCATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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| CDS CCA 72 bp | GCCACTGAATCACATACTCTAACTAGGCTGACCGTATaGTTAAGTGAATTTTATCTCTACGAAGTAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ATESHTLTRLTV*LSEFYLYEVVL Trigger: CAGAACTACTTCGTAGAGATAAAATTCACTTAACCATACGGTCAGCCTAGTTAGAGTATGTGATTCAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600410.5 |
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