RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOP14 (Homo sapiens)

Ensembl gene IDs: ENSG00000087269

Ensembl transcript IDs: ENST00000314262.10, ENST00000398071.4, ENST00000416614.7, ENST00000502735.5, ENST00000507120.1

Found 480 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTaGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAG +
Preference number: 1 (lower is better)
Translates to: ICITTVNSTHEGKRP*LTEITLARIPSPHE
Trigger: CTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
3UTR-3UTR TCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGCTCGAACTCCTGGGCTaGAGCAATCTTCCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLLELLG*SNLPAL
Trigger: CAAGGCAGGAAGATTGCTTCAGCCCAGGAGTTCGAG...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR-3UTR CCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCACCGCAGGCAGCGGGTaGGGGGAGCTTATTTATAAA +
Preference number: 2 (lower is better)
Translates to: THEGKRPWLTEITLARIPTAGSG*GELIYK
Trigger: TTTATAAATAAGCTCCCCCCACCCGCTGCCTGCGGT...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314262.10
3UTR CAA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTaGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCT +
Preference number: 2 (lower is better)
Translates to: CITTVNSTHEGKRPW*TEITLARIPSPHEA
Trigger: AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
3UTR-3UTR TCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGAATCCCCAGTCCCCATaGGGCTTGTCCAGACGCAGT +
Preference number: 2 (lower is better)
Translates to: IICITTVNSTHEGKRPWLNPQSP*GLSRRS
Trigger: ACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATT...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
3UTR-3UTR TCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAGCAAACGTCCGTGGTTaGCAGAAATTACACTGGCCA +
Preference number: 2 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEANVRG*QKLHWP
Trigger: TGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGC...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
3UTR-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGGCTCACACCTATAATTaGGGGGCCAAGGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: IICITTVNSTHEGKRPWLAHTYN*GAKAGG
Trigger: TCCACCTGCCTTGGCCCCCCAATTATAGGTGTGAGC...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGGGCCTCCCAGAGGGTTaGAATTGCAGATGTGAGGTA +
Preference number: 2 (lower is better)
Translates to: IICITTVNSTHEGKRPWLGLPEG*NCRCEV
Trigger: TACCTCACATCTGCAATTCCAACCCTCTGGGAGGCC...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR-3UTR CCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTCTGGTCTCGAACTCCTaGGCTGAAGCAATCTTCCTG +
Preference number: 2 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEILVSNS*AEAIFL
Trigger: CAGGAAGATTGCTTCAGCCCAGGAGTTCGAGACCAG...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR-3UTR CCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAGAAGGCAAACGTCCGTaGTTGACAGAAATTACACTG +
Preference number: 2 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEEGKRP*LTEITL
Trigger: CAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTC...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
3UTR-3UTR CAA 90 bp GCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGAGCAATCTTCCTGCCTaGGCCTCCCAGAGGGTTGGA +
Preference number: 3 (lower is better)
Translates to: AVNQSQLITHRPFPIPEVSNLPA*ASQRVG
Trigger: TCCAACCCTCTGGGAGGCCAAGGCAGGAAGATTGCT...CACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR-3UTR CAA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCGGCAAACGTCCGTGGTaGACAGAAATTACACTGGCC +
Preference number: 3 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFGKRPW*TEITLA
Trigger: GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
3UTR TCA 72 bp CTGCCTTGGCCTCCCAGAGGGTTGGAATTGCAGATGTaGGGTAATGTCCAGTTCCTTGCCTTATTTATAAAA +
Preference number: 3 (lower is better)
Translates to: LPWPPRGLELQM*GNVQFLALFIK
Trigger: TTTTATAAATAAGGCAAGGAACTGGACATTACCTCACATCTGCAATTCCAACCCTCTGGGAGGCCAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR CCA 72 bp ACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTaGTTGACAGAAATTACACTGGCCAGAATCCCCAGT +
Preference number: 3 (lower is better)
Translates to: TTVNSTHEGKRP*LTEITLARIPS
Trigger: ACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCATCTTCGCCTTCGCCATaGCGCGCGCCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDASSPSP*RAPRCA
Trigger: GGCGCAGCGGGGCGCGCGCCATGGCGAAGGCGAAGA...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGAGCTCCTGGAGCTCCTaGGGGTGGCTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: AVNQSQLITHRPFPIPEVSSWSS*GWLQSA
Trigger: GGCGGACTGCAGCCACCCGCAGGAGCTCCAGGAGCT...CACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTTCTTCGCCTTCGCCATaGCGCGCGCCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFSSPSP*RAPRCA
Trigger: GGCGCAGCGGGGCGCGCGCCATGGCGAAGGCGAAGA...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGCACTTGGTGAGCAGCTaGCTGAGGCACACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLHLVSS*LRHTRA
Trigger: TGCCCTCGTGTGCCTCAGTCAGCTGCTCACCAAGTG...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCGCCAGGTGATCCGTaGGGAGGGCTTGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACPPGDP*GGLGEA
Trigger: GGCCTCTCCAAGCCCTCCTCACGGATCACCTGGCGG...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCCTGCAGTCCGCCAGGTaGTCCGTGAGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPLQSAR*SVRRAW
Trigger: CCAAGCCCTCCTCACGGATCACCTGGCGGACTGCAG...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCACTGCAGTCCGCCAGGTaGTCCGTGAGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPLQSAR*SVRRAW
Trigger: CCAAGCCCTCCTCACGGATCACCTGGCGGACTGCAG...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCCTTCCTGAGGGCCCGTaGGCGAGACACCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFLPEGP*ARHPGQ
Trigger: CTGCCCGGGGTGTCTCGCGCACGGGCCCTCAGGAAG...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAGCTCCTGCGGGTGGCTaGAGTCCGCCAGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGAAPAGG*SPPGDP
Trigger: CGGATCACCTGGCGGACTGCAGCCACCCGCAGGAGC...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCGGCAGTCCCACGTCGTaGCGCGTCTTCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFGSPTS*RVFRPR
Trigger: CCTGGGCCGGAAGACGCGCCACGACGTGGGACTGCC...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCGGCCCCATGATGGCGTaGAAGGATGGCAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPGPMMA*KDGRDP
Trigger: CGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCC...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGGGCCCCATGATGGCGTaGAAGGATGGCAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPGPMMA*KDGRDP
Trigger: CGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCC...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTCTGTGTACGCTTCCTaGGGGCCCGTGCGCGAGACA +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEASVYAS*GPVRET
Trigger: TGTCTCGCGCACGGGCCCTCAGGAAGCGTACACAGA...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGGCAGGGACCCGTACATaGGCACGCAGCGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AVNQSQLITHRPFPIPEVAGTRT*ARSASA
Trigger: TGCTGAAGCGCTGCGTGCTCATGTACGGGTCCCTGC...CACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGCCGCCAGGTGATCCGTaGGGAGGGCTTGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KRPWLTEITLARIPSPHEPPGDP*GGLGEA
Trigger: GGCCTCTCCAAGCCCTCCTCACGGATCACCTGGCGG...CTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCAGGGAGAGGCTGCTCTaGTGCCACGTGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: GLSRRSEPVAADNTQTIPRERLL*CHVATS
Trigger: GGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCT...GGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGAGGGAGAGGCTGCTCTaGTGCCACGTGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPRERLL*CHVATS
Trigger: GGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCT...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAAGCGGAGGGAGAGGCTaGTCTGCTGCCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGASGGRG*SAATWP
Trigger: TGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCT...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCAGCGGAGGGAGAGGCTaGTCTGCTGCCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CPDAVNQSQLITHRPFPISGGRG*SAATWP
Trigger: TGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCT...GATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTGCTCCTGCGGGTGGCTaGAGTCCGCCAGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFAPAGG*SPPGDP
Trigger: CGGATCACCTGGCGGACTGCAGCCACCCGCAGGAGC...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATAGCTCCTGGAGCTCCTaGGGGTGGCTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDSSWSS*GWLQSA
Trigger: GGCGGACTGCAGCCACCCGCAGGAGCTCCAGGAGCT...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCACACTTGGTGAGCAGCTaGCTGAGGCACACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPHLVSS*LRHTRA
Trigger: TGCCCTCGTGTGCCTCAGTCAGCTGCTCACCAAGTG...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTGCAGGGACCCGTACATaGGCACGCAGCGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACAGTRT*ARSASA
Trigger: TGCTGAAGCGCTGCGTGCTCATGTACGGGTCCCTGC...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCCTGCAGTCCGCCAGGTaGTCCGTGAGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFLQSAR*SVRRAW
Trigger: CCAAGCCCTCCTCACGGATCACCTGGCGGACTGCAG...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCACAGCCAGCCGGGGTGTaGAAAGCTTCAGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPQPAGV*KASVGQ
Trigger: CTGTCCCACTGAAGCTTTTCACACCCCGGCTGGCTG...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCAACCCTGGCAATaGCGCCCGGCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPIQPWQ*RPAFGL
Trigger: GAGACCAAAGGCCGGGCGGCATTGCCAGGGTTGGAT...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTGAGAGGCTGCTCTGCTaGCACGTGGCCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEAERLLC*HVATSS
Trigger: AGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTC...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCGCTCCTGCGGGTGGCTaGAGTCCGCCAGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: THEGKRPWLTEITLARIPAPAGG*SPPGDP
Trigger: CGGATCACCTGGCGGACTGCAGCCACCCGCAGGAGC...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTCACCTCGAACGGATTaGAGTTGGCCTTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEASPRTD*SWPSPG
Trigger: GCCCGGCGAAGGCCAACTCCAATCCGTTCGAGGTGA...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTCCGCCTCCTCCAAAGTaGGCAGCAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEAPPPPK*AAVSSA
Trigger: TGCTGAGCTGACTGCTGCCCACTTTGGAGGAGGCGG...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGCCTCACTCTCCACGTTaGATTCCAGGTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLPHSPR*IPGPSG
Trigger: GCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGG...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGCACATCCAACCCTaGCAATGCCGCCCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPEHIQP*QCRPAF
Trigger: AAAGGCCGGGCGGCATTGCCAGGGTTGGATGTGCTC...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCGGCAGGGGTCACCACTaGGTGCCAGAAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPGRGHH*VPEVGS
Trigger: ACTTCCGACTTCTGGCACCCAGTGGTGACCCCTGCC...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTGGCCTCTGTCGAAGTTaGGGCCCTCAGTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEAGLCRS*GPQSTR
Trigger: GCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCC...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACGGCCTCTGTCGAAGTTaGGGCCCTCAGTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: ITLARIPSPHEACPDAVNGLCRS*GPQSTR
Trigger: GCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCC...GTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGGGCCTCTGTCGAAGTTaGGGCCCTCAGTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPGLCRS*GPQSTR
Trigger: GCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCC...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGCCTCGGGGCTCATGTTaGTGTTGTATTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLPRGSC*CCILRS
Trigger: GCTTCGGAGAATACAACAGCAACATGAGCCCCGAGG...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGAGAGGCTGCTCTGCTaGCACGTGGCCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: RRSEPVAADNTQTIPDPRERLLC*HVATSS
Trigger: AGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTC...TCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGAGCTCCTGGAGCTCCTaGGGGTGGCTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSSWSS*GWLQSA
Trigger: GGCGGACTGCAGCCACCCGCAGGAGCTCCAGGAGCT...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCACCGCCTCCTCCAAAGTaGGCAGCAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HEACPDAVNQSQLITHRPPPPPK*AAVSSA
Trigger: TGCTGAGCTGACTGCTGCCCACTTTGGAGGAGGCGG...TGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATCCGCCTCCTCCAAAGTaGGCAGCAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GKRPWLTEITLARIPSPHPPPPK*AAVSSA
Trigger: TGCTGAGCTGACTGCTGCCCACTTTGGAGGAGGCGG...ATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCCCCTTCACCACGTCCTaGAGGGACAGGATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFPFTTS*RDRMGH
Trigger: GTGCCCCATCCTGTCCCTCCAGGACGTGGTGAAGGG...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTGGTCTAGCTTCTCCGTaGGCTCGAGGGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACGLASP*ARGHLL
Trigger: GAGAAGATGCCCTCGAGCTCACGGAGAAGCTAGACC...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCATGTGTCCTCCCCGCCTaGACTGTCACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDACVLPA*TVTFFL
Trigger: GAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACA...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGCTGCAGTCCGCCAGGTaGTCCGTGAGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGLQSAR*SVRRAW
Trigger: CCAAGCCCTCCTCACGGATCACCTGGCGGACTGCAG...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AACCTTGGACTCAGCTCAAGCAGTCCTCCTGCTTCAGCCTCCCGAGTAGTTGGGCCGCATCCCGTTCCATaGTTTCTGAGAGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: NLGLSSSSPPASASRVVGPHPVP*FLRVAS
Trigger: GGATGCAACTCTCAGAAATCATGGAACGGGATGCGG...CCCAACTACTCGGGAGGCTGAAGCAGGAGGACTGCTTGAGCTGAGTCCAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR TCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAAATCCCCAGTCCCCATaGGGCTTGTCCAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDANPQSP*GLSRRS
Trigger: ACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATT...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTATCCAACCCTGGCAATaGCGCCCGGCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFIQPWQ*RPAFGL
Trigger: GAGACCAAAGGCCGGGCGGCATTGCCAGGGTTGGAT...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCGGGGTCACCACTGGGTaGCAGAAGTCGGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: CPDAVNQSQLITHRPFPIGVTTG*QKSEVG
Trigger: TCCAACTTCCGACTTCTGGCACCCAGTGGTGACCCC...GATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTAGCGGCCGGCAGAGCTaGTTCTGGCTTTCCATTTCG +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACSGRQS*FWLSIS
Trigger: CGAAATGGAAAGCCAGAAGCAGCTCTGCCGGCCGCT...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTCAGTGGGACAGGCTTaGTCTTCTCACAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEASVGQA*SSHRSA
Trigger: CGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGA...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGTCAGTGGGACAGGCTTaGTCTTCTCACAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPSVGQA*SSHRSA
Trigger: CGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGA...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCTTCGCCTTCGCCATaGCGCGCGCCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSISSPSP*RAPRCA
Trigger: GGCGCAGCGGGGCGCGCGCCATGGCGAAGGCGAAGA...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGCGAACGGATTGGAGTTaGCCTTCGCCGGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGRTDWS*PSPGPL
Trigger: GAGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCG...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGTTCCGGCCCAGGATCTaGAACTTCTGCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLFRPRI*NFCLLT
Trigger: AGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAA...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGGGCAGTCCCACGTCGTaGCGCGTCTTCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQGSPTS*RVFRPR
Trigger: CCTGGGCCGGAAGACGCGCCACGACGTGGGACTGCC...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCACCTCACTCTCCACGTTaGATTCCAGGTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPPHSPR*IPGPSG
Trigger: GCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGG...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATGCCGCCCGGCCTTTaGTCTCAATCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLMPPGL*SQSFLP
Trigger: TGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCAT...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCACCCTTCACCACGTCCTaGAGGGACAGGATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSPFTTS*RDRMGH
Trigger: GTGCCCCATCCTGTCCCTCCAGGACGTGGTGAAGGG...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAGATGGCGTGGAAGGATaGCAGGGACCCGTACATGAG +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGADGVEG*QGPVHE
Trigger: CTCATGTACGGGTCCCTGCCATCCTTCCACGCCATC...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGGGCCCCATGATGGCGTaGAAGGATGGCAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGGPMMA*KDGRDP
Trigger: CGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCC...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTCTGTGTACGCTTCCTaGGGGCCCGTGCGCGAGACA +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFSVYAS*GPVRET
Trigger: TGTCTCGCGCACGGGCCCTCAGGAAGCGTACACAGA...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGAGGGCATCTTCTCGTTaGGCTTGTCTCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPRASSR*ACLSLF
Trigger: GAAGAGGGAGAGACAAGCTCAACGAGAAGATGCCCT...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCCACTTGGTGAGCAGCTaGCTGAGGCACACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: THEGKRPWLTEITLARIPHLVSS*LRHTRA
Trigger: TGCCCTCGTGTGCCTCAGTCAGCTGCTCACCAAGTG...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGCAGGACAGTCGGATGTaGTTGGCCTCTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPQDSRM*LASVEV
Trigger: AACTTCGACAGAGGCCAATCACATCCGACTGTCCTG...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCCGCCAGGTGATCCGTaGGGAGGGCTTGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGPPGDP*GGLGEA
Trigger: GGCCTCTCCAAGCCCTCCTCACGGATCACCTGGCGG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCACTCGAACTCCTGGGCTaGAGCAATCTTCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDALELLG*SNLPAL
Trigger: CAAGGCAGGAAGATTGCTTCAGCCCAGGAGTTCGAG...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR GCA 90 bp ATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCCTCGGGGCTCATGTTaGTGTTGTATTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: ITLARIPSPHEACPDAVNPRGSC*CCILRS
Trigger: GCTTCGGAGAATACAACAGCAACATGAGCCCCGAGG...GTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTTCCAGCTTCCTGAGGTaGTCCTGCTCTTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACSSFLR*SCSSFA
Trigger: GGCAAAGGAAGAGCAGGAGCACCTCAGGAAGCTGGA...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATTCCAGCTTCCTGAGGTaGTCCTGCTCTTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GKRPWLTEITLARIPSPHSSFLR*SCSSFA
Trigger: GGCAAAGGAAGAGCAGGAGCACCTCAGGAAGCTGGA...ATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCACCTTCTTCCTCGTTaGTCTCAGGGTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: AVNQSQLITHRPFPIPEVHLLPR*SQGHWL
Trigger: AAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTG...CACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTCACCTTCTTCCTCGTTaGTCTCAGGGTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEAHLLPR*SQGHWL
Trigger: AAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTG...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATATAGGATTCAGGGGCTaGGAACGTGTAGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GKRPWLTEITLARIPSPHIGFRG*ERVGQL
Trigger: GAGCTGCCCTACACGTTCGCAGCCCCTGAATCCTAT...ATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAATCCAACCCTGGCAATaGCGCCCGGCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSIQPWQ*RPAFGL
Trigger: GAGACCAAAGGCCGGGCGGCATTGCCAGGGTTGGAT...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCGGGGTCACCACTGGGTaGCAGAAGTCGGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFGVTTG*QKSEVG
Trigger: TCCAACTTCCGACTTCTGGCACCCAGTGGTGACCCC...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTTCAGTGGGACAGGCTTaGTCTTCTCACAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACSVGQA*SSHRSA
Trigger: CGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGA...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCACTGAAGCAATCTTCCTaGCTTGGCCTCCCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGALKQSS*LGLPEG
Trigger: ACCCTCTGGGAGGCCAAGGCAGGAAGATTGCTTCAG...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR CCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAGATTCCAGGTCCAAGTaGCTATCTGGGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGADSRSK*LSGLSL
Trigger: GAGCGACAGCCCAGATAGCCACTTGGACCTGGAATC...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCACCTCACTCTCCACGTTaGATTCCAGGTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HEACPDAVNQSQLITHRPPHSPR*IPGPSG
Trigger: GCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGG...TGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTACAGTCGGATGTGATTaGCCTCTGTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEATVGCD*PLSKLG
Trigger: CCCCAACTTCGACAGAGGCCAATCACATCCGACTGT...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGACAGTCGGATGTGATTaGCCTCTGTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPTVGCD*PLSKLG
Trigger: CCCCAACTTCGACAGAGGCCAATCACATCCGACTGT...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGCTCACACCTATAATTaGGGGGCCAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RRSEPVAADNTQTIPDPRAHTYN*GAKAGG
Trigger: TCCACCTGCCTTGGCCCCCCAATTATAGGTGTGAGC...TCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAGGTCTAGCTTCTCCGTaGGCTCGAGGGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSGLASP*ARGHLL
Trigger: GAGAAGATGCCCTCGAGCTCACGGAGAAGCTAGACC...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACGGGTGGTTGCACTTCTaGATTCTCTCCACCACCAAA +
Preference number: 4 (lower is better)
Translates to: ITLARIPSPHEACPDAVNGWLHF*ILSTTK
Trigger: TTTGGTGGTGGAGAGAATTCAGAAGTGCAACCACCC...GTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTCCGCCAGGTGATCCGTaGGGAGGGCTTGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIPPGDP*GGLGEA
Trigger: GGCCTCTCCAAGCCCTCCTCACGGATCACCTGGCGG...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCACCGCATCCCGTTCCATaGTTTCTGAGAGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: HEACPDAVNQSQLITHRPPHPVP*FLRVAS
Trigger: GGATGCAACTCTCAGAAATCATGGAACGGGATGCGG...TGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR TCA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGCAAACGTCCGTGGTTaGCAGAAATTACACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPANVRG*QKLHWP
Trigger: TGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGC...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTGCAAACGTCCGTGGTTaGCAGAAATTACACTGGCCA +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEAANVRG*QKLHWP
Trigger: TGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGC...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCACACCTTCTTCCTCGTTaGTCTCAGGGTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDAHLLPR*SQGHWL
Trigger: AAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTG...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTCGAGACTCGGGTGGTTaGACTTCTGAATTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEARDSGG*TSEFSP
Trigger: TGGAGAGAATTCAGAAGTGCAACCACCCGAGTCTCG...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGGAGAGGCTGCTCTGCTaGCACGTGGCCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGERLLC*HVATSS
Trigger: AGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTC...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCAGGGAGAGGCTGCTCTaGTGCCACGTGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIRERLL*CHVATS
Trigger: GGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCT...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCACCATTTCGGTCAGTGTaGTCTGACACAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGAPFRSV*SDTAPG
Trigger: TCCAGGAGCTGTGTCAGAGCACACTGACCGAAATGG...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGCGGCCGGCAGAGCTaGTTCTGGCTTTCCATTTCG +
Preference number: 4 (lower is better)
Translates to: THEGKRPWLTEITLARIPSGRQS*FWLSIS
Trigger: CGAAATGGAAAGCCAGAAGCAGCTCTGCCGGCCGCT...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGGAACTGATTGTCCTTaGGGATTTCTCGAACGGCCC +
Preference number: 4 (lower is better)
Translates to: GKRPWLTEITLARIPSPHGTDCP*GFLERP
Trigger: GGGCCGTTCGAGAAATCCGCAAGGACAATCAGTTCC...ATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCGAACGGATTGGAGTTaGCCTTCGCCGGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGRTDWS*PSPGPL
Trigger: GAGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCTCTGTGTACGCTTCCTaGGGGCCCGTGCGCGAGACA +
Preference number: 4 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFISVYAS*GPVRET
Trigger: TGTCTCGCGCACGGGCCCTCAGGAAGCGTACACAGA...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCTGGGACAGGAGAGTCTaGATTTCTTTCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLSRRSEPVAADNTQTIPWDRRV*ISFQSW
Trigger: CCAAGACTGGAAAGAAATTCAGACTCTCCTGTCCCA...GGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGACAGTCGGATGTaGTTGGCCTCTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFQDSRM*LASVEV
Trigger: AACTTCGACAGAGGCCAATCACATCCGACTGTCCTG...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGCAGGGACCCGTACATaGGCACGCAGCGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGAGTRT*ARSASA
Trigger: TGCTGAAGCGCTGCGTGCTCATGTACGGGTCCCTGC...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCGCAGGGACCCGTACATaGGCACGCAGCGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFIAGTRT*ARSASA
Trigger: TGCTGAAGCGCTGCGTGCTCATGTACGGGTCCCTGC...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAATCCTCGCCAGGAACTaGTTGTCCTTGCGGATTTCT +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGAILARN*LSLRIS
Trigger: AGAAATCCGCAAGGACAATCAGTTCCTGGCGAGGAT...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR TCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTATCCTCGCCAGGAACTaGTTGTCCTTGCGGATTTCT +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACILARN*LSLRIS
Trigger: AGAAATCCGCAAGGACAATCAGTTCCTGGCGAGGAT...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR GCA 90 bp GCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGTTCCTGAGGTGCTCCTaGTCTTCCTTTGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: AVNQSQLITHRPFPIPEVFLRCS*SSFANS
Trigger: AGAATTGGCAAAGGAAGAGCAGGAGCACCTCAGGAA...CACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGTTCCAGCTCTTTCCTTaGCGCTTATCAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPFQLFP*RLSTLS
Trigger: GGAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAA...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCTCCACCACCAAAAGCTaGTCTTCCATCGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPSTTKS*SSIDLP
Trigger: AGGAAGATCGATGGAAGAGCAGCTTTTGGTGGTGGA...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAAGCGCTCTGAAAGGGTaGACCAGAGTGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSSALKG*TRVEPW
Trigger: CCAAGGTTCCACTCTGGTGCACCCTTTCAGAGCGCT...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTAGGGAGAGGCTGCTCTaGTGCCACGTGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGRERLL*CHVATS
Trigger: GGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCT...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGAGCTCCTGGAGCTCCTaGGGGTGGCTGCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAASSWSS*GWLQSA
Trigger: GGCGGACTGCAGCCACCCGCAGGAGCTCCAGGAGCT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCATTTCGGTCAGTGTaGTCTGACACAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDPFRSV*SDTAPG
Trigger: TCCAGGAGCTGTGTCAGAGCACACTGACCGAAATGG...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGAGCGGCCGGCAGAGCTaGTTCTGGCTTTCCATTTCG +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSGRQS*FWLSIS
Trigger: CGAAATGGAAAGCCAGAAGCAGCTCTGCCGGCCGCT...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTTCACCTCGAACGGATTaGAGTTGGCCTTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSSPRTD*SWPSPG
Trigger: GCCCGGCGAAGGCCAACTCCAATCCGTTCGAGGTGA...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGGCAGTCCCACGTCGTaGCGCGTCTTCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAGSPTS*RVFRPR
Trigger: CCTGGGCCGGAAGACGCGCCACGACGTGGGACTGCC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAGATTCCAGGTCCAAGTaGCTATCTGGGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSDSRSK*LSGLSL
Trigger: GAGCGACAGCCCAGATAGCCACTTGGACCTGGAATC...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCAAGGGTGCACCAGAGTaGAACCTTGGCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: CPDAVNQSQLITHRPFPIKGAPE*NLGLLC
Trigger: ACAAAGCAAGCCAAGGTTCCACTCTGGTGCACCCTT...GATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTAAGGGTGCACCAGAGTaGAACCTTGGCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACKGAPE*NLGLLC
Trigger: ACAAAGCAAGCCAAGGTTCCACTCTGGTGCACCCTT...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATTGGGACAGGAGAGTCTaGATTTCTTTCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GKRPWLTEITLARIPSPHWDRRV*ISFQSW
Trigger: CCAAGACTGGAAAGAAATTCAGACTCTCCTGTCCCA...ATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTTGTGTCCTCCCCGCCTaGACTGTCACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSCVLPA*TVTFFL
Trigger: GAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACA...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTGTGTCCTCCCCGCCTaGACTGTCACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARICVLPA*TVTFFL
Trigger: GAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCACTTGGTGAGCAGCTaGCTGAGGCACACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGHLVSS*LRHTRA
Trigger: TGCCCTCGTGTGCCTCAGTCAGCTGCTCACCAAGTG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTAATCCCCAGTCCCCATaGGGCTTGTCCAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSNPQSP*GLSRRS
Trigger: ACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATT...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGATGCTTCTCGATGTCTaGCAAAGACTGGCCATAATG +
Preference number: 4 (lower is better)
Translates to: AVNQSQLITHRPFPIPEVMLLDV*QRLAIM
Trigger: CATTATGGCCAGTCTTTGGCAGACATCGAGAAGCAT...CACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGTCCACAATGTCATTATaGTTCTCGATGTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLSTMSL*FSMSAK
Trigger: TTTGGCAGACATCGAGAAGCATAATGACATTGTGGA...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTTCCTTTGCCAATTCTaGCTCCGTCTTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEAFLCQF*LRLHPV
Trigger: AACAGGATGAAGACGGAGGCAGAATTGGCAAAGGAA...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTCCAGCTTCCTGAGGTaGTCCTGCTCTTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSSFLR*SCSSFA
Trigger: GGCAAAGGAAGAGCAGGAGCACCTCAGGAAGCTGGA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCTGCCTCTGCTCTTTTaGTGGCTTCTCGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CPDAVNQSQLITHRPFPILPLLF*WLLVFF
Trigger: GAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAG...GATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATTGCTTTGTTTCCTTCTaGGAGACTCGGGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDCFVSF*ETRVVA
Trigger: TGCAACCACCCGAGTCTCGCAGAAGGAAACAAAGCA...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCTCCTGCGGGTGGCTaGAGTCCGCCAGGTGATCCG +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAAPAGG*SPPGDP
Trigger: CGGATCACCTGGCGGACTGCAGCCACCCGCAGGAGC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTCACCTCGAACGGATTaGAGTTGGCCTTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGSPRTD*SWPSPG
Trigger: GCCCGGCGAAGGCCAACTCCAATCCGTTCGAGGTGA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCATTTCTTTCCAGTCTTaGTCTAGCTTCTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPISFQS*SSFSVS
Trigger: GCTCACGGAGAAGCTAGACCAAGACTGGAAAGAAAT...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGGATTCCAGGTCCAAGTaGCTATCTGGGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGDSRSK*LSGLSL
Trigger: GAGCGACAGCCCAGATAGCCACTTGGACCTGGAATC...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCGACTGTGAGGTCTGGTaGGTCATCTGTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFDCEVW*VICSQI
Trigger: GATTTGGCTACAGATGACCCACCAGACCTCACAGTC...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTAATGACTGTGAGGTCTaGTGGGTCATCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACNDCEV*WVICSQ
Trigger: TTGGCTACAGATGACCCACCAGACCTCACAGTCATT...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACTCAGGTATAAACCTCTaGGACAAAGCCACATACTCC +
Preference number: 4 (lower is better)
Translates to: ITLARIPSPHEACPDAVNSGINL*DKATYS
Trigger: GGAGTATGTGGCTTTGTCCCAGAGGTTTATACCTGA...GTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCCTGGTCTCGAACTCCTaGGCTGAAGCAATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: THEGKRPWLTEITLARIPLVSNS*AEAIFL
Trigger: CAGGAAGATTGCTTCAGCCCAGGAGTTCGAGACCAG...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR TCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGTCTAGCTTCTCCGTaGGCTCGAGGGCATCTTCTC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGGLASP*ARGHLL
Trigger: GAGAAGATGCCCTCGAGCTCACGGAGAAGCTAGACC...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGTAAATTCTACACATaGAGGCAAACGTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPSKFYT*RQTSVV
Trigger: AACCACGGACGTTTGCCTTCATGTGTAGAATTTACT...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGCCTCGGGGCTCATGTTaGTGTTGTATTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGPRGSC*CCILRS
Trigger: GCTTCGGAGAATACAACAGCAACATGAGCCCCGAGG...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAATGCTTCTCGATGTCTaGCAAAGACTGGCCATAATG +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDAMLLDV*QRLAIM
Trigger: CATTATGGCCAGTCTTTGGCAGACATCGAGAAGCAT...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTAGTGGAACCTTGGCTTaGTTTGTTTGGAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RPWLTEITLARIPSPHEASGTLA*FVWSCY
Trigger: ATAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACT...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTAGCGCTCTGAAAGGGTaGACCAGAGTGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSSALKG*TRVEPW
Trigger: CCAAGGTTCCACTCTGGTGCACCCTTTCAGAGCGCT...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAGCGGAGGGAGAGGCTaGTCTGCTGCCACGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQASGGRG*SAATWP
Trigger: TGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGAGCGGCCGGCAGAGCTaGTTCTGGCTTTCCATTTCG +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQSGRQS*FWLSIS
Trigger: CGAAATGGAAAGCCAGAAGCAGCTCTGCCGGCCGCT...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAATTTCTTTCCAGTCTTaGTCTAGCTTCTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGAISFQS*SSFSVS
Trigger: GCTCACGGAGAAGCTAGACCAAGACTGGAAAGAAAT...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCGATTCCAGGTCCAAGTaGCTATCTGGGCTGTCGCTC +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIDSRSK*LSGLSL
Trigger: GAGCGACAGCCCAGATAGCCACTTGGACCTGGAATC...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCTCTGCTCTTTTGCTaGCTTCTCGTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDPLLFC*LLVFFL
Trigger: GAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGG...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAGACTGTGAGGTCTGGTaGGTCATCTGTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSDCEVW*VICSQI
Trigger: GATTTGGCTACAGATGACCCACCAGACCTCACAGTC...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTGGCAGGGGTCACCACTaGGTGCCAGAAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIGRGHH*VPEVGS
Trigger: ACTTCCGACTTCTGGCACCCAGTGGTGACCCCTGCC...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGATGGCGTGGAAGGATaGCAGGGACCCGTACATGAG +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGDGVEG*QGPVHE
Trigger: CTCATGTACGGGTCCCTGCCATCCTTCCACGCCATC...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTTCACGCTTGTGTTTGTaGATCAGCCTCTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFSRLCL*ISLFLS
Trigger: GGAAAGGAAGAGGCTGATCCACAAACACAAGCGTGA...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTGCTCACACCTATAATTaGGGGGCCAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSAHTYN*GAKAGG
Trigger: TCCACCTGCCTTGGCCCCCCAATTATAGGTGTGAGC...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTGGGGGAGCTGGAGGTTaGAATCACACCAACATTATA +
Preference number: 4 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFGGAGG*NHTNII
Trigger: TATAATGTTGGTGTGATTCCAACCTCCAGCTCCCCC...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTGCAATCTTCCTGCCTTaGCCTCCCAGAGGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSAIFLP*PPRGLE
Trigger: TTCCAACCCTCTGGGAGGCCAAGGCAGGAAGATTGC...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR TCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCATCTGTGTACGCTTCCTaGGGGCCCGTGCGCGAGACA +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQASVYAS*GPVRET
Trigger: TGTCTCGCGCACGGGCCCTCAGGAAGCGTACACAGA...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCTTTGTCTCTGTTCTCTaGCTTGGGAGTTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFFVSVL*LGSFVG
Trigger: TCCCACAAAACTCCCAAGTCAGAGAACAGAGACAAA...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGGGGTGGTTGCACTTCTaGATTCTCTCCACCACCAAA +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGGWLHF*ILSTTK
Trigger: TTTGGTGGTGGAGAGAATTCAGAAGTGCAACCACCC...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCGGGTGGTTGCACTTCTaGATTCTCTCCACCACCAAA +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFGWLHF*ILSTTK
Trigger: TTTGGTGGTGGAGAGAATTCAGAAGTGCAACCACCC...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGAGGATCTGGAACTTCTaGCTGTTAACTTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: KRPWLTEITLARIPSPHERIWNF*LLTFTS
Trigger: CGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCT...CTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACTCCACAATGTCATTATaGTTCTCGATGTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ITLARIPSPHEACPDAVNSTMSL*FSMSAK
Trigger: TTTGGCAGACATCGAGAAGCATAATGACATTGTGGA...GTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCCTCCTGCTCTTCCTTTaGCAATTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFLLLFL*QFCLRL
Trigger: AAGACGGAGGCAGAATTGGCAAAGGAAGAGCAGGAG...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCTCCAGCTTCCTGAGGTaGTCCTGCTCTTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLASSFLR*SCSSFA
Trigger: GGCAAAGGAAGAGCAGGAGCACCTCAGGAAGCTGGA...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCCAGCTCTTTCCTTaGCGCTTATCAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSFQLFP*RLSTLS
Trigger: GGAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAA...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCATAGGATTCAGGGGCTaGGAACGTGTAGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFIIGFRG*ERVGQL
Trigger: GAGCTGCCCTACACGTTCGCAGCCCCTGAATCCTAT...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCTCCACCACCAAAAGCTaGTCTTCCATCGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: THEGKRPWLTEITLARIPSTTKS*SSIDLP
Trigger: AGGAAGATCGATGGAAGAGCAGCTTTTGGTGGTGGA...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCCGAGACTCGGGTGGTTaGACTTCTGAATTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFRDSGG*TSEFSP
Trigger: TGGAGAGAATTCAGAAGTGCAACCACCCGAGTCTCG...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCTTTGATAGCGTCACTTaGAGATTCAGGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPFDSVT*RFRKHL
Trigger: CAGATGTTTCCTGAATCTGCAAGTGACGCTATCAAA...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCTTTGATAGCGTCACTTaGAGATTCAGGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: GLSRRSEPVAADNTQTIPFDSVT*RFRKHL
Trigger: CAGATGTTTCCTGAATCTGCAAGTGACGCTATCAAA...GGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGATCCAACCCTGGCAATaGCGCCCGGCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAIQPWQ*RPAFGL
Trigger: GAGACCAAAGGCCGGGCGGCATTGCCAGGGTTGGAT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCACATATGCATCGGGCTTaGGTTTTTCCTTTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: TEITLARIPSPHEACPDAHMHRA*VFPFCL
Trigger: GAGACAAAAAGGAAAAACCCAAGCCCGATGCATATG...TGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCATATGCATCGGGCTTaGGTTTTTCCTTTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PWLTEITLARIPSPHEACHMHRA*VFPFCL
Trigger: GAGACAAAAAGGAAAAACCCAAGCCCGATGCATATG...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTGCTCTCAGGGTCACTaGCTTCCTTGCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGCSQGH*LPCFAL
Trigger: AAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCCTCACTCTCCACGTTaGATTCCAGGTCCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGPHSPR*IPGPSG
Trigger: GCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGAGCACATCCAACCCTaGCAATGCCGCCCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAEHIQP*QCRPAF
Trigger: AAAGGCCGGGCGGCATTGCCAGGGTTGGATGTGCTC...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGCAGGGGTCACCACTaGGTGCCAGAAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAGRGHH*VPEVGS
Trigger: ACTTCCGACTTCTGGCACCCAGTGGTGACCCCTGCC...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCACCCTTCACCACGTCCTaGAGGGACAGGATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAPFTTS*RDRMGH
Trigger: GTGCCCCATCCTGTCCCTCCAGGACGTGGTGAAGGG...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGACCAGAGTGGAACCTTaGCTTGCTTTGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KRPWLTEITLARIPSPHETRVEP*LALFGV
Trigger: AACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGT...CTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGGGCCCCATGATGGCGTaGAAGGATGGCAGGGACCCG +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLGPMMA*KDGRDP
Trigger: CGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCC...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCGAAGGCAAACGTCCGTaGTTGACAGAAATTACACTG +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFEGKRP*LTEITL
Trigger: CAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTC...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAGGGGGAGCTGGAGGTTaGAATCACACCAACATTATA +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSGGAGG*NHTNII
Trigger: TATAATGTTGGTGTGATTCCAACCTCCAGCTCCCCC...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCTTGAACCCAGGAGGTaGAGGTTGTGCCATTGCACT +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARILEPRR*RLCHCT
Trigger: AGTGCAATGGCACAACCTCCACCTCCTGGGTTCAAG...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR TCA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGGGCATCTTCTCGTTaGGCTTGTCTCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFIRASSR*ACLSLF
Trigger: GAAGAGGGAGAGACAAGCTCAACGAGAAGATGCCCT...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTGTGTCCTCCCCGCCTaGACTGTCACCTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAACVLPA*TVTFFL
Trigger: GAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATAACATCTGGCAAAGATaGTATAAGTGCACAACCAAC +
Preference number: 4 (lower is better)
Translates to: GKRPWLTEITLARIPSPHNIWQR*YKCTTN
Trigger: GTTGGTTGTGCACTTATATCATCTTTGCCAGATGTT...ATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCAAACATCTGGCAAAGATaGTATAAGTGCACAACCAAC +
Preference number: 4 (lower is better)
Translates to: SEPVAADNTQTIPDPRGANIWQR*YKCTTN
Trigger: GTTGGTTGTGCACTTATATCATCTTTGCCAGATGTT...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCAGGACAGTCGGATGTaGTTGGCCTCTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGQDSRM*LASVEV
Trigger: AACTTCGACAGAGGCCAATCACATCCGACTGTCCTG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCCCGTTCCATGATTTCTaGGAGTTGCATCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLAPFHDF*ELHPRQ
Trigger: CTGGCGAGGATGCAACTCTCAGAAATCATGGAACGG...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR TCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGAATCCCCAGTCCCCATaGGGCTTGTCCAGACGCAGT +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAANPQSP*GLSRRS
Trigger: ACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATAGTAAATTCTACACATaGAGGCAAACGTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDSKFYT*RQTSVV
Trigger: AACCACGGACGTTTGCCTTCATGTGTAGAATTTACT...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCCCTCGGGGCTCATGTTaGTGTTGTATTCTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLAPRGSC*CCILRS
Trigger: GCTTCGGAGAATACAACAGCAACATGAGCCCCGAGG...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGATCCTGTTAGAGGGCTaGGCCTTCATTTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGILLEG*AFISKP
Trigger: TGGCTTTGAAATGAAGGCGCAGCCCTCTAACAGGAT...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCATCCTGTTAGAGGGCTaGGCCTTCATTTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFILLEG*AFISKP
Trigger: TGGCTTTGAAATGAAGGCGCAGCCCTCTAACAGGAT...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCCTTTGCCAATTCTaGCTCCGTCTTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSFLCQF*LRLHPV
Trigger: AACAGGATGAAGACGGAGGCAGAATTGGCAAAGGAA...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTTCCTGAGGTGCTCCTaGTCTTCCTTTGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGFLRCS*SSFANS
Trigger: AGAATTGGCAAAGGAAGAGCAGGAGCACCTCAGGAA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTTCCAGCTCTTTCCTTaGCGCTTATCAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGFQLFP*RLSTLS
Trigger: GGAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTGCTTTGTTTCCTTCTaGGAGACTCGGGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARICFVSF*ETRVVA
Trigger: TGCAACCACCCGAGTCTCGCAGAAGGAAACAAAGCA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCATTTCTTCCATCTCATaGATCGCATCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFISSIS*IASRRT
Trigger: TGTTCTCCGAGATGCGATGCATGAGATGGAAGAAAT...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCCATTTCGGTCAGTGTaGTCTGACACAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGPFRSV*SDTAPG
Trigger: TCCAGGAGCTGTGTCAGAGCACACTGACCGAAATGG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCGGAACTGATTGTCCTTaGGGATTTCTCGAACGGCCC +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLAGTDCP*GFLERP
Trigger: GGGCCGTTCGAGAAATCCGCAAGGACAATCAGTTCC...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTTCCGGCCCAGGATCTaGAACTTCTGCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIFRPRI*NFCLLT
Trigger: AGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCATTTCTTTCCAGTCTTaGTCTAGCTTCTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: THEGKRPWLTEITLARIPISFQS*SSFSVS
Trigger: GCTCACGGAGAAGCTAGACCAAGACTGGAAAGAAAT...GGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGAATGACTGTGAGGTCTaGTGGGTCATCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGNDCEV*WVICSQ
Trigger: TTGGCTACAGATGACCCACCAGACCTCACAGTCATT...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCATGCCGCCCGGCCTTTaGTCTCAATCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIMPPGL*SQSFLP
Trigger: TGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCAT...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAGCACATCCAACCCTaGCAATGCCGCCCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTEHIQP*QCRPAF
Trigger: AAAGGCCGGGCGGCATTGCCAGGGTTGGATGTGCTC...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGAGCACATCCAACCCTaGCAATGCCGCCCGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAEHIQP*QCRPAF
Trigger: AAAGGCCGGGCGGCATTGCCAGGGTTGGATGTGCTC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGGCAGGGGTCACCACTaGGTGCCAGAAGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAGRGHH*VPEVGS
Trigger: ACTTCCGACTTCTGGCACCCAGTGGTGACCCCTGCC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGCCCTTCACCACGTCCTaGAGGGACAGGATGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLPFTTS*RDRMGH
Trigger: GTGCCCCATCCTGTCCCTCCAGGACGTGGTGAAGGG...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGGCCTCTGTCGAAGTTaGGGCCCTCAGTCTACTCGC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAGLCRS*GPQSTR
Trigger: GCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGATGGCGTGGAAGGATaGCAGGGACCCGTACATGAG +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAADGVEG*QGPVHE
Trigger: CTCATGTACGGGTCCCTGCCATCCTTCCACGCCATC...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTGTGAAAAGCTTCAGTaGGACAGGCTTGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFCEKLQ*DRLALL
Trigger: GAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACA...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTGTGAAAAGCTTCAGTaGGACAGGCTTGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGCEKLQ*DRLALL
Trigger: GAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCACCGCAGGCAGCGGGTaGGGGGAGCTTATTTATAAA +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLATAGSG*GELIYK
Trigger: TTTATAAATAAGCTCCCCCCACCCGCTGCCTGCGGT...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314262.10
CDS-3UTR TCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGCCTCTTCTCTTGTTTTaGCTTGGCAATGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGPLLLF*LGNELF
Trigger: GAAGAGCTCATTGCCAAGTCAAAACAAGAGAAGAGG...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTTTGTCTCTGTTCTCTaGCTTGGGAGTTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGFVSVL*LGSFVG
Trigger: TCCCACAAAACTCCCAAGTCAGAGAACAGAGACAAA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAGACCAGCCGGGGTGTaGAAAGCTTCAGTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQARPAGV*KASVGQ
Trigger: CTGTCCCACTGAAGCTTTTCACACCCCGGCTGGTCT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398071.4
CDS-3UTR GCA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGATGCTTCTCGATGTCTaGCAAAGACTGGCCATAATG +
Preference number: 4 (lower is better)
Translates to: SISSGDVLTETKPQAAGGMLLDV*QRLAIM
Trigger: CATTATGGCCAGTCTTTGGCAGACATCGAGAAGCAT...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCTCCACAATGTCATTATaGTTCTCGATGTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFSTMSL*FSMSAK
Trigger: TTTGGCAGACATCGAGAAGCATAATGACATTGTGGA...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCATCCTGTTAGAGGGCTaGGCCTTCATTTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIILLEG*AFISKP
Trigger: TGGCTTTGAAATGAAGGCGCAGCCCTCTAACAGGAT...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTCTCCTGCTCTTCCTTTaGCAATTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGLLLFL*QFCLRL
Trigger: AAGACGGAGGCAGAATTGGCAAAGGAAGAGCAGGAG...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTTCCAGCTCTTTCCTTaGCGCTTATCAACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIFQLFP*RLSTLS
Trigger: GGAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCTGCTTTGTTTCCTTCTaGGAGACTCGGGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFICFVSF*ETRVVA
Trigger: TGCAACCACCCGAGTCTCGCAGAAGGAAACAAAGCA...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTGCTTTGTTTCCTTCTaGGAGACTCGGGTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGCFVSF*ETRVVA
Trigger: TGCAACCACCCGAGTCTCGCAGAAGGAAACAAAGCA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATTTTGATAGCGTCACTTaGAGATTCAGGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDFDSVT*RFRKHL
Trigger: CAGATGTTTCCTGAATCTGCAAGTGACGCTATCAAA...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAATTTCTTCCATCTCATaGATCGCATCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSISSIS*IASRRT
Trigger: TGTTCTCCGAGATGCGATGCATGAGATGGAAGAAAT...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGGGGTCACCACTGGGTaGCAGAAGTCGGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAGVTTG*QKSEVG
Trigger: TCCAACTTCCGACTTCTGGCACCCAGTGGTGACCCC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGAGCGCTCTGAAAGGGTaGACCAGAGTGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAASALKG*TRVEPW
Trigger: CCAAGGTTCCACTCTGGTGCACCCTTTCAGAGCGCT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTTCACCTCGAACGGATTaGAGTTGGCCTTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEISPRTD*SWPSPG
Trigger: GCCCGGCGAAGGCCAACTCCAATCCGTTCGAGGTGA...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGCCGCCTCCTCCAAAGTaGGCAGCAGTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQPPPPK*AAVSSA
Trigger: TGCTGAGCTGACTGCTGCCCACTTTGGAGGAGGCGG...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGTGCTCTCAGGGTCACTaGCTTCCTTGCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQCSQGH*LPCFAL
Trigger: AAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCA...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGAAGGGTGCACCAGAGTaGAACCTTGGCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQKGAPE*NLGLLC
Trigger: ACAAAGCAAGCCAAGGTTCCACTCTGGTGCACCCTT...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGAGGCTGGAGTGCAGTaGCTCAATCACGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAEAGVQ*LNHGSL
Trigger: CAGTGAGCCGTGATTGAGCCACTGCACTCCAGCCTC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416614.7
3UTR CAA 72 bp ACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTaGACAGAAATTACACTGGCCAGAATCCCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: TVNSTHEGKRPW*TEITLARIPSP
Trigger: GGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTGGGACAGGAGAGTCTaGATTTCTTTCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGWDRRV*ISFQSW
Trigger: CCAAGACTGGAAAGAAATTCAGACTCTCCTGTCCCA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTTTGTCTCTGTTCTCTaGCTTGGGAGTTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARIFVSVL*LGSFVG
Trigger: TCCCACAAAACTCCCAAGTCAGAGAACAGAGACAAA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAAACATCTGGCAAAGATaGTATAAGTGCACAACCAAC +
Preference number: 4 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSNIWQR*YKCTTN
Trigger: GTTGGTTGTGCACTTATATCATCTTTGCCAGATGTT...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGCTGCCTCTGCTCTTTTaGTGGCTTCTCGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQLPLLF*WLLVFF
Trigger: GAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAG...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCCTGCCTCTGCTCTTTTaGTGGCTTCTCGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLALPLLF*WLLVFF
Trigger: GAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAG...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCTCCACCACCAAAAGCTaGTCTTCCATCGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLASTTKS*SSIDLP
Trigger: AGGAAGATCGATGGAAGAGCAGCTTTTGGTGGTGGA...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGGGGTCACCACTGGGTaGCAGAAGTCGGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQGVTTG*QKSEVG
Trigger: TCCAACTTCCGACTTCTGGCACCCAGTGGTGACCCC...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAACAGTCGGATGTGATTaGCCTCTGTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: CITTVNSTHEGKRPWLTETVGCD*PLSKLG
Trigger: CCCCAACTTCGACAGAGGCCAATCACATCCGACTGT...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTGAAGGCAAACGTCCGTaGTTGACAGAAATTACACTG +
Preference number: 4 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSEGKRP*LTEITL
Trigger: CAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTC...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAAGGGCATCTTCTCGTTaGGCTTGTCTCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTRASSR*ACLSLF
Trigger: GAAGAGGGAGAGACAAGCTCAACGAGAAGATGCCCT...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAGGGCATCTTCTCGTTaGGCTTGTCTCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQARASSR*ACLSLF
Trigger: GAAGAGGGAGAGACAAGCTCAACGAGAAGATGCCCT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCACAGGACAGTCGGATGTaGTTGGCCTCTGTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAQDSRM*LASVEV
Trigger: AACTTCGACAGAGGCCAATCACATCCGACTGTCCTG...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGCTCCTGCTCTTCCTTTaGCAATTCTGCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAALLLFL*QFCLRL
Trigger: AAGACGGAGGCAGAATTGGCAAAGGAAGAGCAGGAG...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGATAGGATTCAGGGGCTaGGAACGTGTAGGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQIGFRG*ERVGQL
Trigger: GAGCTGCCCTACACGTTCGCAGCCCCTGAATCCTAT...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTAGCGCTCTGAAAGGGTaGACCAGAGTGGAACCTTGG +
Preference number: 4 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEISALKG*TRVEPW
Trigger: CCAAGGTTCCACTCTGGTGCACCCTTTCAGAGCGCT...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGTCAGTGGGACAGGCTTaGTCTTCTCACAGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQSVGQA*SSHRSA
Trigger: CGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGA...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTATTTCTTTCCAGTCTTaGTCTAGCTTCTCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGISFQS*SSFSVS
Trigger: GCTCACGGAGAAGCTAGACCAAGACTGGAAAGAAAT...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAGACTGTGAGGTCTGGTaGGTCATCTGTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEDCEVW*VICSQI
Trigger: GATTTGGCTACAGATGACCCACCAGACCTCACAGTC...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGTCAGGTATAAACCTCTaGGACAAAGCCACATACTCC +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQSGINL*DKATYS
Trigger: GGAGTATGTGGCTTTGTCCCAGAGGTTTATACCTGA...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTACCAGAGTGGAACCTTaGCTTGCTTTGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGTRVEP*LALFGV
Trigger: AACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGT...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGAAGGGTGCACCAGAGTaGAACCTTGGCTTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAKGAPE*NLGLLC
Trigger: ACAAAGCAAGCCAAGGTTCCACTCTGGTGCACCCTT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAACAGTCGGATGTGATTaGCCTCTGTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQATVGCD*PLSKLG
Trigger: CCCCAACTTCGACAGAGGCCAATCACATCCGACTGT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGGATGGCGTGGAAGGATaGCAGGGACCCGTACATGAG +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWDGVEG*QGPVHE
Trigger: CTCATGTACGGGTCCCTGCCATCCTTCCACGCCATC...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCGAAGGCAAACGTCCGTaGTTGACAGAAATTACACTG +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLAEGKRP*LTEITL
Trigger: CAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTC...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCTCACACCTATAATTaGGGGGCCAAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQAHTYN*GAKAGG
Trigger: TCCACCTGCCTTGGCCCCCCAATTATAGGTGTGAGC...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTCCTCTTCTCTTGTTTTaGCTTGGCAATGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIPLLLF*LGNELF
Trigger: GAAGAGCTCATTGCCAAGTCAAAACAAGAGAAGAGG...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGGGTGGTTGCACTTCTaGATTCTCTCCACCACCAAA +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAGWLHF*ILSTTK
Trigger: TTTGGTGGTGGAGAGAATTCAGAAGTGCAACCACCC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTCCGTTCCATGATTTCTaGGAGTTGCATCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEIPFHDF*ELHPRQ
Trigger: CTGGCGAGGATGCAACTCTCAGAAATCATGGAACGG...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR GCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTAGGATCTGGAACTTCTaGCTGTTAACTTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIRIWNF*LLTFTS
Trigger: CGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCT...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGAACCATCATGTCATATaGATCGGGCTTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TDHSRSQRCISGFILFHQNHHVI*IGLGFF
Trigger: GAAAAACCCAAGCCCGATGCATATGACATGATGGTT...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAATTCCTGAGGTGCTCCTaGTCTTCCTTTGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEFLRCS*SSFANS
Trigger: AGAATTGGCAAAGGAAGAGCAGGAGCACCTCAGGAA...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGCACCTTCTTCCTCGTTaGTCTCAGGGTCACTGGCTT +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQHLLPR*SQGHWL
Trigger: AAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTG...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTCCACCACCAAAAGCTaGTCTTCCATCGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAASTTKS*SSIDLP
Trigger: AGGAAGATCGATGGAAGAGCAGCTTTTGGTGGTGGA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCACGAGACTCGGGTGGTTaGACTTCTGAATTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQARDSGG*TSEFSP
Trigger: TGGAGAGAATTCAGAAGTGCAACCACCCGAGTCTCG...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACACGAGACTCGGGTGGTTaGACTTCTGAATTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTRDSGG*TSEFSP
Trigger: TGGAGAGAATTCAGAAGTGCAACCACCCGAGTCTCG...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTGCTTTGTTTGGAGTTaGTATGTAAAGAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFCFVWS*YVKNPK
Trigger: CTTGGGATTCTTTACATAGCAACTCCAAACAAAGCA...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGTGGAACCTTGGCTTaGTTTGTTTGGAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: VNSTHEGKRPWLTEITLASGTLA*FVWSCY
Trigger: ATAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACT...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTAGTGGAACCTTGGCTTaGTTTGTTTGGAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGSGTLA*FVWSCY
Trigger: ATAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACT...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTCCATTTCGGTCAGTGTaGTCTGACACAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEIPFRSV*SDTAPG
Trigger: TCCAGGAGCTGTGTCAGAGCACACTGACCGAAATGG...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCATTCCGGCCCAGGATCTaGAACTTCTGCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAFRPRI*NFCLLT
Trigger: AGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAA...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGACTGTGAGGTCTGGTaGGTCATCTGTAGCCAAATC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQADCEVW*VICSQI
Trigger: GATTTGGCTACAGATGACCCACCAGACCTCACAGTC...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAACCTCTTCTCTTGTTTTaGCTTGGCAATGAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEPLLLF*LGNELF
Trigger: GAAGAGCTCATTGCCAAGTCAAAACAAGAGAAGAGG...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGAGGATCTGGAACTTCTaGCTGTTAACTTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAARIWNF*LLTFTS
Trigger: CGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTAACCATCATGTCATATaGATCGGGCTTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSINHHVI*IGLGFF
Trigger: GAAAAACCCAAGCCCGATGCATATGACATGATGGTT...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCATTCCTGAGGTGCTCCTaGTCTTCCTTTGCCAATTCT +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAFLRCS*SSFANS
Trigger: AGAATTGGCAAAGGAAGAGCAGGAGCACCTCAGGAA...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCACTGCCTCTGCTCTTTTaGTGGCTTCTCGTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQALPLLF*WLLVFF
Trigger: GAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAG...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTATTTCTTCCATCTCATaGATCGCATCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIISSIS*IASRRT
Trigger: TGTTCTCCGAGATGCGATGCATGAGATGGAAGAAAT...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTGCTTTGTTTGGAGTTaGTATGTAAAGAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: STHEGKRPWLTEITLARICFVWS*YVKNPK
Trigger: CTTGGGATTCTTTACATAGCAACTCCAAACAAAGCA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTTTCCGGCCCAGGATCTaGAACTTCTGCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEIFRPRI*NFCLLT
Trigger: AGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAA...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGTGCTCTCAGGGTCACTaGCTTCCTTGCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLCSQGH*LPCFAL
Trigger: AAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCA...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACACCTCTGCTCTTTTGCTaGCTTCTCGTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTPLLFC*LLVFFL
Trigger: GAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGG...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCACCTCTGCTCTTTTGCTaGCTTCTCGTTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQAPLLFC*LLVFFL
Trigger: GAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGG...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGATGCCGCCCGGCCTTTaGTCTCAATCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQMPPGL*SQSFLP
Trigger: TGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCAT...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGATGCCGCCCGGCCTTTaGTCTCAATCATTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLMPPGL*SQSFLP
Trigger: TGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCAT...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTCAGGTATAAACCTCTaGGACAAAGCCACATACTCC +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAASGINL*DKATYS
Trigger: GGAGTATGTGGCTTTGTCCCAGAGGTTTATACCTGA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGGGCCTCCCAGAGGGTTaGAATTGCAGATGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWGLPEG*NCRCEV
Trigger: TACCTCACATCTGCAATTCCAACCCTCTGGGAGGCC...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR TCA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAGTTTTGACTTGGCAATaGGCTCTTCAATCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEVLTWQ*ALQSAL
Trigger: AAGAGCTGATTGAAGAGCTCATTGCCAAGTCAAAAC...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGTGGGACAGGAGAGTCTaGATTTCTTTCCAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQWDRRV*ISFQSW
Trigger: CCAAGACTGGAAAGAAATTCAGACTCTCCTGTCCCA...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGAACCATCATGTCATATaGATCGGGCTTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAANHHVI*IGLGFF
Trigger: GAAAAACCCAAGCCCGATGCATATGACATGATGGTT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGATCCTGTTAGAGGGCTaGGCCTTCATTTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQILLEG*AFISKP
Trigger: TGGCTTTGAAATGAAGGCGCAGCCCTCTAACAGGAT...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACATTCCTTTGCCAATTCTaGCTCCGTCTTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTFLCQF*LRLHPV
Trigger: AACAGGATGAAGACGGAGGCAGAATTGGCAAAGGAA...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGATTTCTTCCATCTCATaGATCGCATCTCGGAGAACA +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAISSIS*IASRRT
Trigger: TGTTCTCCGAGATGCGATGCATGAGATGGAAGAAAT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTGCTTTGTTTGGAGTTaGTATGTAAAGAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: HSISSGDVLTETKPQAAGCFVWS*YVKNPK
Trigger: CTTGGGATTCTTTACATAGCAACTCCAAACAAAGCA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGCATATGCATCGGGCTTaGGTTTTTCCTTTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAHMHRA*VFPFCL
Trigger: GAGACAAAAAGGAAAAACCCAAGCCCGATGCATATG...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTGCTCTCAGGGTCACTaGCTTCCTTGCTTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWCSQGH*LPCFAL
Trigger: AAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCA...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGTGTGAAAAGCTTCAGTaGGACAGGCTTGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQCEKLQ*DRLALL
Trigger: GAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACA...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGGGGGAGCTGGAGGTTaGAATCACACCAACATTATA +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQGGAGG*NHTNII
Trigger: TATAATGTTGGTGTGATTCCAACCTCCAGCTCCCCC...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGTTTGTCTCTGTTCTCTaGCTTGGGAGTTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLFVSVL*LGSFVG
Trigger: TCCCACAAAACTCCCAAGTCAGAGAACAGAGACAAA...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGAGGATCTGGAACTTCTaGCTGTTAACTTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLRIWNF*LLTFTS
Trigger: CGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCT...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTCCACAATGTCATTATaGTTCTCGATGTCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAASTMSL*FSMSAK
Trigger: TTTGGCAGACATCGAGAAGCATAATGACATTGTGGA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGTTCCTTTGCCAATTCTaGCTCCGTCTTCATCCTGTT +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQFLCQF*LRLHPV
Trigger: AACAGGATGAAGACGGAGGCAGAATTGGCAAAGGAA...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTTTGATAGCGTCACTTaGAGATTCAGGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: IHSISSGDVLTETKPQAAFDSVT*RFRKHL
Trigger: CAGATGTTTCCTGAATCTGCAAGTGACGCTATCAAA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAGTGGAACCTTGGCTTaGTTTGTTTGGAGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQASGTLA*FVWSCY
Trigger: ATAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGAATGACTGTGAGGTCTaGTGGGTCATCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWNDCEV*WVICSQ
Trigger: TTGGCTACAGATGACCCACCAGACCTCACAGTCATT...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGACCAGAGTGGAACCTTaGCTTGCTTTGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQTRVEP*LALFGV
Trigger: AACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGT...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACCAGAGTGGAACCTTaGCTTGCTTTGTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IICITTVNSTHEGKRPWLTRVEP*LALFGV
Trigger: AACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGT...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTCACGCTTGTGTTTGTaGATCAGCCTCTTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWSRLCL*ISLFLS
Trigger: GGAAAGGAAGAGGCTGATCCACAAACACAAGCGTGA...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR TCA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAACATCTGGCAAAGATaGTATAAGTGCACAACCAAC +
Preference number: 4 (lower is better)
Translates to: RIHSISSGDVLTETKPQANIWQR*YKCTTN
Trigger: GTTGGTTGTGCACTTATATCATCTTTGCCAGATGTT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGATGCTTCTCGATGTCTaGCAAAGACTGGCCATAATG +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWMLLDV*QRLAIM
Trigger: CATTATGGCCAGTCTTTGGCAGACATCGAGAAGCAT...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGAACCATCATGTCATATaGATCGGGCTTGGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: FRIHSISSGDVLTETKPQNHHVI*IGLGFF
Trigger: GAAAAACCCAAGCCCGATGCATATGACATGATGGTT...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CCA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTCATATGCATCGGGCTTaGGTTTTTCCTTTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEIHMHRA*VFPFCL
Trigger: GAGACAAAAAGGAAAAACCCAAGCCCGATGCATATG...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR TCA 90 bp AATATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGAGTAAATTCTACACATaGAGGCAAACGTCCGTGGTT +
Preference number: 4 (lower is better)
Translates to: NIICITTVNSTHEGKRPWSKFYT*RQTSVV
Trigger: AACCACGGACGTTTGCCTTCATGTGTAGAATTTACT...CCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR GCA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACATGCTTTGTTTGGAGTTaGTATGTAAAGAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTCFVWS*YVKNPK
Trigger: CTTGGGATTCTTTACATAGCAACTCCAAACAAAGCA...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS GCA 90 bp TTCGCGCCCCGACCTTCTTCGCCTTCGCCATGGCGCGCGCCCCGCTaGGCCCAAGGGCCCGAGACCCGAAGAGAGACAGGCGCGCGCTAC +
Preference number: 5 (lower is better)
Translates to: FAPRPSSPSPWRAPR*AQGPETRRETGARY
Trigger: GTAGCGCGCGCCTGTCTCTCTTCGGGTCTCGGGCCCTTGGGCGCAGCGGGGCGCGCGCCATGGCGAAGGCGAAGAAGGTCGGGGCGCGAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS GCA 90 bp GGGGCCCTCAGTCTACTCGCCCAGCGGAGGGAGAGGCTGCTCTGCTaGCACGTGGCCACATCCTCTCTAGCAGACACCACGAGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GALSLLAQRRERLLC*HVATSSLADTTSSS
Trigger: GGAACTGCTCGTGGTGTCTGCTAGAGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCTGGGCGAGTAGACTGAGGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 90 bp TTCCTGAGGGCCCGTGCGCGAGACACCCCGGGCAGTCCCACGTCGTaGCGCGTCTTCCGGCCCAGGATCTGGAACTTCTGCCTGTTAACT +
Preference number: 5 (lower is better)
Translates to: FLRARARDTPGSPTS*RVFRPRIWNFCLLT
Trigger: AGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAAGACGCGCCACGACGTGGGACTGCCCGGGGTGTCTCGCGCACGGGCCCTCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 90 bp GTTGGGGCCCTCAGTCTACTCGCCCAGCGGAGGGAGAGGCTGCTCTaGTGCCACGTGGCCACATCCTCTCTAGCAGACACCACGAGCAGT +
Preference number: 5 (lower is better)
Translates to: VGALSLLAQRRERLL*CHVATSSLADTTSS
Trigger: ACTGCTCGTGGTGTCTGCTAGAGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCTGGGCGAGTAGACTGAGGGCCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 90 bp ATCCGTGAGGAGGGCTTGGAGAGGCCCCATGATGGCGTGGAAGGATaGCAGGGACCCGTACATGAGCACGCAGCGCTTCAGCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: IREEGLERPHDGVEG*QGPVHEHAALQQGQ
Trigger: CTGGCCCTGCTGAAGCGCTGCGTGCTCATGTACGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
ENST00000507120.1
CDS CCA 90 bp CACAGCCAGGCAGGACAGTCGGATGTGATTGGCCTCTGTCGAAGTTaGGGCCCTCAGTCTACTCGCCCAGCGGAGGGAGAGGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: HSQAGQSDVIGLCRS*GPQSTRPAEGEAAL
Trigger: CAGAGCAGCCTCTCCCTCCGCTGGGCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCAATCACATCCGACTGTCCTGCCTGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 90 bp GGTCGGGAATTCGAGACCAGCCAGCCGGGGTGTGAAAAGCTTCAGTaGGACAGGCTTGCTCTTCTCACAGGTCAGCGGCCGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GREFETSQPGCEKLQ*DRLALLTGQRPAEL
Trigger: CAGCTCTGCCGGCCGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACACCCCGGCTGGCTGGTCTCGAATTCCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502735.5
CDS CCA 90 bp CTGAGGTCGGGAATTCGAGACCAGCCGGGGTGTGAAAAGCTTCAGTaGGACAGGCTTGCTCTTCTCACAGGTCAGCGGCCGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LRSGIRDQPGCEKLQ*DRLALLTGQRPAEL
Trigger: CAGCTCTGCCGGCCGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACACCCCGGCTGGTCTCGAATTCCCGACCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398071.4
CDS CCA 90 bp ACCCCGGGCAGTCCCACGTCGTGGCGCGTCTTCCGGCCCAGGATCTaGAACTTCTGCCTGTTAACTTTCACCTCGAACGGATTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: TPGSPTSWRVFRPRI*NFCLLTFTSNGLEL
Trigger: CAACTCCAATCCGTTCGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAAGACGCGCCACGACGTGGGACTGCCCGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 90 bp CAAGTGGCTATCTGGGCTGTCGCTCTCCTCTGTGTCCTCCCCGCCTaGACTGTCACCTTCTTCCTCGTTGCTCTCAGGGTCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QVAIWAVALLCVLPA*TVTFFLVALRVTGF
Trigger: GAAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACAGAGGAGAGCGACAGCCCAGATAGCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 90 bp AGTCCCACGTCGTGGCGCGTCTTCCGGCCCAGGATCTGGAACTTCTaGCTGTTAACTTTCACCTCGAACGGATTGGAGTTGGCCTTCGCC +
Preference number: 5 (lower is better)
Translates to: SPTSWRVFRPRIWNF*LLTFTSNGLELAFA
Trigger: GGCGAAGGCCAACTCCAATCCGTTCGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAAGACGCGCCACGACGTGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 90 bp TCCAAACTCGAGGACTTTGACCAGCCGGGGTGTGAAAAGCTTCAGTaGGACAGGCTTGCTCTTCTCACAGGTCAGCGGCCGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SKLEDFDQPGCEKLQ*DRLALLTGQRPAEL
Trigger: CAGCTCTGCCGGCCGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACACCCCGGCTGGTCAAAGTCCTCGAGTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000507120.1
CDS-3UTR CAA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCCCCAGGAGGTGGAGGTaGTGCCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPPRRWR*CHCTPA
Trigger: GGCTGGAGTGCAATGGCACAACCTCCACCTCCTGGG...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS TCA 90 bp GCAGGTGGATTACCTGAGGTCGGGAATTCGAGACCAGCCGGGGTGTaGAAAGCTTCAGTGGGACAGGCTTGCTCTTCTCACAGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: AGGLPEVGNSRPAGV*KASVGQACSSHRSA
Trigger: CGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACACCCCGGCTGGTCTCGAATTCCCGACCTCAGGTAATCCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398071.4
CDS TCA 90 bp GTGGATTACCTGAGGTCGGGAATTCGAGACCAGCCAGCCGGGGTGTaGAAAGCTTCAGTGGGACAGGCTTGCTCTTCTCACAGGTCAGCG +
Preference number: 5 (lower is better)
Translates to: VDYLRSGIRDQPAGV*KASVGQACSSHRSA
Trigger: CGCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACACCCCGGCTGGCTGGTCTCGAATTCCCGACCTCAGGTAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502735.5
CDS-3UTR CAA 90 bp ACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCCTCACTCTCCACGTaGGATTCCAGGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: TLARIPSPHEACPDAVNQSSLST*DSRSKW
Trigger: CCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGA...CTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGGCCTCTGTCGAAGTaGGGGCCCTCAGTCTACTCG +
Preference number: 5 (lower is better)
Translates to: RPWLTEITLARIPSPHEAWPLSK*GPSVYS
Trigger: CGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCA...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTATCCGTGAGGAGGGCTaGGAGAGGCCCCATGATGGC +
Preference number: 5 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFIREEG*ERPHDG
Trigger: GCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGAT...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS GCA 90 bp TCTCCTCTGTGTCCTCCCCGCCTGAACTGTCACCTTCTTCCTCGTTaGTCTCAGGGTCACTGGCTTCCTTGCTTTGCTCTTCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: SPLCPPRLNCHLLPR*SQGHWLPCFALPGH
Trigger: ATGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 90 bp TTCTCGTTTTCTTCCTCACTCTCCACGTTGGATTCCAGGTCCAAGTaGCTATCTGGGCTGTCGCTCTCCTCTGTGTCCTCCCCGCCTGAA +
Preference number: 5 (lower is better)
Translates to: FSFSSSLSTLDSRSK*LSGLSLSSVSSPPE
Trigger: TTCAGGCGGGGAGGACACAGAGGAGAGCGACAGCCCAGATAGCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGAAGAAAACGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTCGAACGGATTGGAGTaGGCCTTCGCCGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSNGLE*AFAGPP
Trigger: AGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCGA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCTCACCTTCTTCCTCGTaGCTCTCAGGGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: GLSRRSEPVAADNTQTIPSPSSS*LSGSLA
Trigger: AGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGA...GGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS CCA 90 bp CCCCGCCTGAACTGTCACCTTCTTCCTCGTTGCTCTCAGGGTCACTaGCTTCCTTGCTTTGCTCTTCCTGGACATCTTCCTCGACATTCA +
Preference number: 5 (lower is better)
Translates to: PRLNCHLLPRCSQGH*LPCFALPGHLPRHS
Trigger: TGAATGTCGAGGAAGATGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGGGGCTCATGTTGCTGTaGTATTCTCCGAAGCGTTTA +
Preference number: 5 (lower is better)
Translates to: TLARIPSPHEACPDAVNQGLMLL*YSPKRL
Trigger: TAAACGCTTCGGAGAATACAACAGCAACATGAGCCC...CTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCTCCTCGGGGCTCATGTaGCTGTTGTATTCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: GLSRRSEPVAADNTQTIPSSGLM*LLYSPK
Trigger: CTTCGGAGAATACAACAGCAACATGAGCCCCGAGGA...GGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTTCCTCACTCTCCACGTaGGATTCCAGGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PWLTEITLARIPSPHEACSSLST*DSRSKW
Trigger: CCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGA...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTAATGCCGCCCGGCCTTaGGTCTCAATCATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RPWLTEITLARIPSPHEANAARP*VSIISS
Trigger: GGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATT...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGGAGTGGAACCTTGGCTaGCTTTGTTTGGAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLEWNLG*LCLELL
Trigger: TAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACTC...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTCAGTGGGACAGGCTaGCTCTTCTCACAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SEPVAADNTQTIPDPRGAFSGTG*LFSQVS
Trigger: GCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAA...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCACCAAACTCGAGGACTTaGACCAGCCGGGGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: HEACPDAVNQSQLITHRPPNSRT*TSRGVK
Trigger: TTTCACACCCCGGCTGGTCAAAGTCCTCGAGTTTGG...TGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS CCA 90 bp GCCGCTTATCAACCCTTTCCCAGGAGTCTGCCTCTGCTCTTTTGCTaGCTTCTCGTTTTCTTCCTCACTCTCCACGTTGGATTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: AAYQPFPRSLPLLFC*LLVFFLTLHVGFQV
Trigger: GACCTGGAATCCAACGTGGAGAGTGAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGACTCCTGGGAAAGGGTTGATAAGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTCGAACGGATTGGAGTaGGCCTTCGCCGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGSNGLE*AFAGPP
Trigger: AGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCGA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTCTCTGTTCTCTGACTaGGGAGTTTTGTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: RPWLTEITLARIPSPHEASLFSD*GVLWDR
Trigger: CCTGTCCCACAAAACTCCCAAGTCAGAGAACAGAGA...AGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCTCTCTGTTCTCTGACTaGGGAGTTTTGTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SRRSEPVAADNTQTIPDPSLFSD*GVLWDR
Trigger: CCTGTCCCACAAAACTCCCAAGTCAGAGAACAGAGA...GGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGGGTCACTGGCTTCCTaGCTTTGCTCTTCCTGGACA +
Preference number: 5 (lower is better)
Translates to: KRPWLTEITLARIPSPHEGSLAS*LCSSWT
Trigger: TGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCC...CTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCGGGTCACTGGCTTCCTaGCTTTGCTCTTCCTGGACA +
Preference number: 5 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFGSLAS*LCSSWT
Trigger: TGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCC...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTAATGCCGCCCGGCCTTaGGTCTCAATCATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PWLTEITLARIPSPHEACNAARP*VSIISS
Trigger: GGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATT...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTGGCCTCTGTCGAAGTaGGGGCCCTCAGTCTACTCG +
Preference number: 5 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFWPLSK*GPSVYS
Trigger: CGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCA...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCAAGCAATCTTCCTGCCTaGGCCTCCCAGAGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSSNLPA*ASQRVG
Trigger: TCCAACCCTCTGGGAGGCCAAGGCAGGAAGATTGCT...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS GCA 90 bp CTTGCCGCTTATCAACCCTTTCCCAGGAGTCTGCCTCTGCTCTTTTaGTGGCTTCTCGTTTTCTTCCTCACTCTCCACGTTGGATTCCAG +
Preference number: 5 (lower is better)
Translates to: LAAYQPFPRSLPLLF*WLLVFFLTLHVGFQ
Trigger: CTGGAATCCAACGTGGAGAGTGAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGACTCCTGGGAAAGGGTTGATAAGCGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCATCTGCCTCTGCTCTTTaGCTGGCTTCTCGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPSASAL*LASRFL
Trigger: AAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGA...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCTTTCCAGCTCTTTCCTaGCCGCTTATCAACCCTTTC +
Preference number: 5 (lower is better)
Translates to: GLSRRSEPVAADNTQTIPFPALS*PLINPF
Trigger: GAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAAA...GGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGTGGAACCTTGGCTaGCTTTGTTTGGAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPEWNLG*LCLELL
Trigger: TAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACTC...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCACACCAGAGTGGAACCTaGGCTTGCTTTGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: SEPVAADNTQTIPDPRGAHQSGT*ACFVWS
Trigger: ACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGTG...TGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCACCAGAGTGGAACCTaGGCTTGCTTTGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PWLTEITLARIPSPHEACHQSGT*ACFVWS
Trigger: ACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGTG...ACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCAGATCCGTGAGGAGGGCTaGGAGAGGCCCCATGATGGC +
Preference number: 5 (lower is better)
Translates to: TDHSRSQRCISGFILFHQIREEG*ERPHDG
Trigger: GCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGAT...CTGATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AACCTTGGACTCAGCTCAAGCAGTCCTCCTGCTTCAGCCTCCCGAGTAGTTGGGCTCCTTACTACTGCCTaGTTTTCTTCCAAACTCGAG +
Preference number: 5 (lower is better)
Translates to: NLGLSSSSPPASASRVVGLLTTA*FSSKLE
Trigger: CTCGAGTTTGGAAGAAAACAAGGCAGTAGTAAGGAG...CCCAACTACTCGGGAGGCTGAAGCAGGAGGACTGCTTGAGCTGAGTCCAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS-3UTR CAA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTGGCAAACGTCCGTGGTaGACAGAAATTACACTGGCC +
Preference number: 5 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFGKRPW*TEITLA
Trigger: GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS TCA 90 bp GCATCCCGTTCCATGATTTCTGAGAGTTGCATCCTCGCCAGGAACTaGTTGTCCTTGCGGATTTCTCGAACGGCCCCTTTAAATTCACGC +
Preference number: 5 (lower is better)
Translates to: ASRSMISESCILARN*LSLRISRTAPLNSR
Trigger: GCGTGAATTTAAAGGGGCCGTTCGAGAAATCCGCAAGGACAATCAGTTCCTGGCGAGGATGCAACTCTCAGAAATCATGGAACGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CAA 90 bp GTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCTTCACCTCGAACGGATaGGAGTTGGCCTTCGCCGGG +
Preference number: 5 (lower is better)
Translates to: VNSTHEGKRPWLTEITLAFTSNG*ELAFAG
Trigger: CCCGGCGAAGGCCAACTCCAATCCGTTCGAGGTGAA...GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ACACTGGCCAGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTTCTCTTGTTTTGACTaGGCAATGAGCTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: TLARIPSPHEACPDAVNQFSCFD*AMSSSI
Trigger: GATTGAAGAGCTCATTGCCAAGTCAAAACAAGAGAA...CTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCTGGCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTCCTCACTCTCCACGTaGGATTCCAGGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSSLST*DSRSKW
Trigger: CCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTGGCCTCTGTCGAAGTaGGGGCCCTCAGTCTACTCG +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGWPLSK*GPSVYS
Trigger: CGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTATCCGTGAGGAGGGCTaGGAGAGGCCCCATGATGGC +
Preference number: 5 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIIREEG*ERPHDG
Trigger: GCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGAT...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTTCAGTGGGACAGGCTaGCTCTTCTCACAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: ADNTQTIPDPRGAFQDSFFSGTG*LFSQVS
Trigger: GCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAA...GAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAAATTCACGCTTGTGTTaGTGGATCAGCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PDAVNQSQLITHRPFPIPNSRLC*WISLFL
Trigger: AAGGAAGAGGCTGATCCACAAACACAAGCGTGAATT...TGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CAA 90 bp AGAATCCCCAGTCCCCATGAGGCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGTGCGTGCCACCACACTaGGCTAATTTTTATGTTTTT +
Preference number: 5 (lower is better)
Translates to: RIPSPHEACPDAVNQSQLCVPPH*ANFYVF
Trigger: AAAAACATAAAAATTAGCCAAGTGTGGTGGCACGCA...CAGCTGCGACTGGTTCACTGCGTCTGGACAAGCCTCATGGGGACTGGGGATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416614.7
CDS TCA 90 bp CTCGTTGAGCTTGTCTCTCCCTCTTCTCTTGTTTTGACTTGGCAATaGGCTCTTCAATCAGCTCTTTCCGGGACTTCGGTTTCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: LVELVSPSSLVLTWQ*ALQSALSGTSVSPA
Trigger: AGCGGGAGAAACCGAAGTCCCGGAAAGAGCTGATTGAAGAGCTCATTGCCAAGTCAAAACAAGAGAAGAGGGAGAGACAAGCTCAACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATGGGCTCATGTTGCTGTaGTATTCTCCGAAGCGTTTA +
Preference number: 5 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDGLMLL*YSPKRL
Trigger: TAAACGCTTCGGAGAATACAACAGCAACATGAGCCC...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCTCACCTTCTTCCTCGTaGCTCTCAGGGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: STHEGKRPWLTEITLARISPSSS*LSGSLA
Trigger: AGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGA...GATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AAACGTCCGTGGTTGACAGAAATTACACTGGCCAGAATCCCCAGTCCCCATGAGTCTGCCTCTGCTCTTTaGCTGGCTTCTCGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: KRPWLTEITLARIPSPHESASAL*LASRFL
Trigger: AAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGA...CTCATGGGGACTGGGGATTCTGGCCAGTGTAATTTCTGTCAACCACGGACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTTTTCCAGCTCTTTCCTaGCCGCTTATCAACCCTTTC +
Preference number: 5 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFFPALS*PLINPF
Trigger: GAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAAA...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GCTTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGTCTCGGAGAACAAATTaGATAGCGTCACTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: ACPDAVNQSQLITHRPFPSRRTN*IASLAD
Trigger: ATCTGCAAGTGACGCTATCAAATTTGTTCTCCGAGA...CGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGATCCGTGAGGAGGGCTaGGAGAGGCCCCATGATGGC +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAAIREEG*ERPHDG
Trigger: GCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGAT...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 90 bp TCTTCCTTTGCCAATTCTGCCTCCGTCTTCATCCTGTTAGAGGGCTaGGCCTTCATTTCAAAGCCAAGCTCGCGAACCATCATGTCATAT +
Preference number: 5 (lower is better)
Translates to: SSFANSASVFILLEG*AFISKPSSRTIMSY
Trigger: ATATGACATGATGGTTCGCGAGCTTGGCTTTGAAATGAAGGCGCAGCCCTCTAACAGGATGAAGACGGAGGCAGAATTGGCAAAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 90 bp GGCAATGCCGCCCGGCCTTTGGTCTCAATCATTTCTTCCATCTCATaGATCGCATCTCGGAGAACAAATTTGATAGCGTCACTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: GNAARPLVSIISSIS*IASRRTNLIASLAD
Trigger: ATCTGCAAGTGACGCTATCAAATTTGTTCTCCGAGATGCGATGCATGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGTCGAACGGATTGGAGTaGGCCTTCGCCGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: FRIHSISSGDVLTETKPQSNGLE*AFAGPP
Trigger: AGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCGA...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGTCGAACGGATTGGAGTaGGCCTTCGCCGGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: IICITTVNSTHEGKRPWLSNGLE*AFAGPP
Trigger: AGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCGA...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTCTCTGTTCTCTGACTaGGGAGTTTTGTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSLFSD*GVLWDR
Trigger: CCTGTCCCACAAAACTCCCAAGTCAGAGAACAGAGA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTCACTGGCTTCCTaGCTTTGCTCTTCCTGGACA +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGGSLAS*LCSSWT
Trigger: TGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCC...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTCACCTTCTTCCTCGTaGCTCTCAGGGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGSPSSS*LSGSLA
Trigger: AGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTGGCCTCTGTCGAAGTaGGGGCCCTCAGTCTACTCG +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAAWPLSK*GPSVYS
Trigger: CGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTTCAGTGGGACAGGCTaGCTCTTCTCACAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGFSGTG*LFSQVS
Trigger: GCTGACCTGTGAGAAGAGCAAGCCTGTCCCACTGAA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TTGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCTCCTTACTACTGCCTaGTTTTCTTCCAAACTCGAG +
Preference number: 5 (lower is better)
Translates to: LSRRSEPVAADNTQTIPDLLTTA*FSSKLE
Trigger: CTCGAGTTTGGAAGAAAACAAGGCAGTAGTAAGGAG...ATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CAA 90 bp AACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCCCTTTAAATTCACGCTaGTGTTTGTGGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: NQSQLITHRPFPIPEVHFPLNSR*CLWISL
Trigger: GAGGCTGATCCACAAACACAAGCGTGAATTTAAAGG...GAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS GCA 90 bp AGAGCCTTCCATTCGCCTTCCTGTGTAGCCAGGCTGTTAAAAAGCTaGTTTACTTTCCGCTTTCTTTCCGCATCCCGTTCCATGATTTCT +
Preference number: 5 (lower is better)
Translates to: RAFHSPSCVARLLKS*FTFRFLSASRSMIS
Trigger: AGAAATCATGGAACGGGATGCGGAAAGAAAGCGGAAAGTAAAGCAGCTTTTTAACAGCCTGGCTACACAGGAAGGCGAATGGAAGGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTCCTCGGGGCTCATGTaGCTGTTGTATTCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGSSGLM*LLYSPK
Trigger: CTTCGGAGAATACAACAGCAACATGAGCCCCGAGGA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TGTCCAGACGCAGTGAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCTTCTCTTGTTTTGACTaGGCAATGAGCTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: CPDAVNQSQLITHRPFPIFSCFD*AMSSSI
Trigger: GATTGAAGAGCTCATTGCCAAGTCAAAACAAGAGAA...GATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTCACTGCGTCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GAACCAGTCGCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTTCATATGCATCGGGCTaGGGTTTTTCCTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: EPVAADNTQTIPDPRGAFSYASG*GFSFLS
Trigger: AGACAAAAAGGAAAAACCCAAGCCCGATGCATATGA...AAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGCGACTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTTTCCAGCTCTTTCCTaGCCGCTTATCAACCCTTTC +
Preference number: 5 (lower is better)
Translates to: SISSGDVLTETKPQAAGGFPALS*PLINPF
Trigger: GAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAAA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAGGGTCACTGGCTTCCTaGCTTTGCTCTTCCTGGACA +
Preference number: 5 (lower is better)
Translates to: CITTVNSTHEGKRPWLTEGSLAS*LCSSWT
Trigger: TGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCC...TTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTCCTCACTCTCCACGTaGGATTCCAGGTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAASSLST*DSRSKW
Trigger: CCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTTTTCCAGCTCTTTCCTaGCCGCTTATCAACCCTTTC +
Preference number: 5 (lower is better)
Translates to: LITHRPFPIPEVHFRIHSFPALS*PLINPF
Trigger: GAAAGGGTTGATAAGCGGCAAGGAAAGAGCTGGAAA...AGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp GCAGCTGATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATCTCGGAGAACAAATTaGATAGCGTCACTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: AADNTQTIPDPRGAFQDSSRRTN*IASLAD
Trigger: ATCTGCAAGTGACGCTATCAAATTTGTTCTCCGAGA...TGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTATCAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCCACCAGAGTGGAACCTaGGCTTGCTTTGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFIHQSGT*ACFVWS
Trigger: ACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGTG...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGCTCATGTTGCTGTaGTATTCTCCGAAGCGTTTA +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGGLMLL*YSPKRL
Trigger: TAAACGCTTCGGAGAATACAACAGCAACATGAGCCC...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTGGGTCATATGCATCGGGCTaGGGTTTTTCCTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: SISSGDVLTETKPQAAGGSYASG*GFSFLS
Trigger: AGACAAAAAGGAAAAACCCAAGCCCGATGCATATGA...CCCACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCATCACCTTCTTCCTCGTaGCTCTCAGGGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: RIHSISSGDVLTETKPQASPSSS*LSGSLA
Trigger: AGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGA...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp CATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGGGTTCTGCCTCTGCTCTTTaGCTGGCTTCTCGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: HSISSGDVLTETKPQAAGSASAL*LASRFL
Trigger: AAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGA...ACCCGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATCGAGTGGAACCTTGGCTaGCTTTGTTTGGAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: TQTIPDPRGAFQDSFYFIEWNLG*LCLELL
Trigger: TAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACTC...GATGAAATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACACCAAACTCGAGGACTTaGACCAGCCGGGGTGTGAAA +
Preference number: 5 (lower is better)
Translates to: ICITTVNSTHEGKRPWLTPNSRT*TSRGVK
Trigger: TTTCACACCCCGGCTGGTCAAAGTCCTCGAGTTTGG...TGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CAA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTGGGCTCATGTTGCTGTaGTATTCTCCGAAGCGTTTA +
Preference number: 5 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSIGLMLL*YSPKRL
Trigger: TAAACGCTTCGGAGAATACAACAGCAACATGAGCCC...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCATCCTCGGGGCTCATGTaGCTGTTGTATTCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: RIHSISSGDVLTETKPQASSGLM*LLYSPK
Trigger: CTTCGGAGAATACAACAGCAACATGAGCCCCGAGGA...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAATGCCGCCCGGCCTTaGGTCTCAATCATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: RIHSISSGDVLTETKPQANAARP*VSIISS
Trigger: GGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGCACCAGAGTGGAACCTaGGCTTGCTTTGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAAHQSGT*ACFVWS
Trigger: ACTCCAAACAAAGCAAGCCAAGGTTCCACTCTGGTG...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTCTGCCTCTGCTCTTTaGCTGGCTTCTCGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAASASAL*LASRFL
Trigger: AAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGAATGCCGCCCGGCCTTaGGTCTCAATCATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: IICITTVNSTHEGKRPWLNAARP*VSIISS
Trigger: GGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATT...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGGGCAAACGTCCGTGGTaGACAGAAATTACACTGGCC +
Preference number: 5 (lower is better)
Translates to: IICITTVNSTHEGKRPWLGKRPW*TEITLA
Trigger: GGCCAGTGTAATTTCTGTCAACCACGGACGTTTGCC...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAACACACAGACCATTCCCGATCCCAGAGGTGCATTTCAGGATTCATTCTATTTCATATGCATCGGGCTaGGGTTTTTCCTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: ITHRPFPIPEVHFRIHSISYASG*GFSFLS
Trigger: AGACAAAAAGGAAAAACCCAAGCCCGATGCATATGA...AATAGAATGAATCCTGAAATGCACCTCTGGGATCGGGAATGGTCTGTGTGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGCCTTTAAATTCACGCTaGTGTTTGTGGATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAAPLNSR*CLWISL
Trigger: GAGGCTGATCCACAAACACAAGCGTGAATTTAAAGG...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS-3UTR CAA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGAGTGGAACCTTGGCTaGCTTTGTTTGGAGTTGCTA +
Preference number: 5 (lower is better)
Translates to: FRIHSISSGDVLTETKPQEWNLG*LCLELL
Trigger: TAGCAACTCCAAACAAAGCAAGCCAAGGTTCCACTC...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAAATTCACGCTTGTGTTaGTGGATCAGCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: RIHSISSGDVLTETKPQANSRLC*WISLFL
Trigger: AAGGAAGAGGCTGATCCACAAACACAAGCGTGAATT...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS TCA 90 bp CCTCGGGGCTCATGTTGCTGTTGTATTCTCCGAAGCGTTTATCTCTaGATACATTGGATTTATCCCTTTCTTTGTACTCTTTTAGTAAAG +
Preference number: 5 (lower is better)
Translates to: PRGSCCCCILRSVYL*IHWIYPFLCTLLVK
Trigger: CTTTACTAAAAGAGTACAAAGAAAGGGATAAATCCAATGTATTCAGAGATAAACGCTTCGGAGAATACAACAGCAACATGAGCCCCGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCAGCGTTCTCTTGTTTTGACTaGGCAATGAGCTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: IHSISSGDVLTETKPQAAFSCFD*AMSSSI
Trigger: GATTGAAGAGCTCATTGCCAAGTCAAAACAAGAGAA...CGCTGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp AGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGGCATCTCGGAGAACAAATTaGATAGCGTCACTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: RIHSISSGDVLTETKPQASRRTN*IASLAD
Trigger: ATCTGCAAGTGACGCTATCAAATTTGTTCTCCGAGA...TGCCTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp TTCAGGATTCATTCTATTTCATCAGGTGACGTTTTAACAGAAACAAAACCGCAGTCATATGCATCGGGCTaGGGTTTTTCCTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: FRIHSISSGDVLTETKPQSYASG*GFSFLS
Trigger: AGACAAAAAGGAAAAACCCAAGCCCGATGCATATGA...CTGCGGTTTTGTTTCTGTTAAAACGTCACCTGATGAAATAGAATGAATCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAATTTGCATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGTCTCGGAGAACAAATTaGATAGCGTCACTTGCAGAT +
Preference number: 5 (lower is better)
Translates to: IICITTVNSTHEGKRPWLSRRTN*IASLAD
Trigger: ATCTGCAAGTGACGCTATCAAATTTGTTCTCCGAGA...CAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTATGCAAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS-3UTR CAA 90 bp ATAACAACAGTAAATTCTACACATGAAGGCAAACGTCCGTGGTTGACAGAAATTTTCTCTTGTTTTGACTaGGCAATGAGCTCTTCAATC +
Preference number: 5 (lower is better)
Translates to: ITTVNSTHEGKRPWLTEIFSCFD*AMSSSI
Trigger: GATTGAAGAGCTCATTGCCAAGTCAAAACAAGAGAA...AATTTCTGTCAACCACGGACGTTTGCCTTCATGTGTAGAATTTACTGTTGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp CCTTCCTTCGCGCCCCGACCTTCTTCGCCTTCGCCATaGCGCGCGCCCCGCTGCGCCCAAGGGCCCGAGACC +
Preference number: 6 (lower is better)
Translates to: PSFAPRPSSPSP*RAPRCAQGPET
Trigger: GGTCTCGGGCCCTTGGGCGCAGCGGGGCGCGCGCCATGGCGAAGGCGAAGAAGGTCGGGGCGCGAAGGAAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314262.10
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp GCCCGTGCGCGAGACACCCCGGGCAGTCCCACGTCGTaGCGCGTCTTCCGGCCCAGGATCTGGAACTTCTGC +
Preference number: 6 (lower is better)
Translates to: ARARDTPGSPTS*RVFRPRIWNFC
Trigger: GCAGAAGTTCCAGATCCTGGGCCGGAAGACGCGCCACGACGTGGGACTGCCCGGGGTGTCTCGCGCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 90 bp CTCCTGCGGGTGGCTGCAGTCCGCCAGGTGATCCGTGAGGAGGGCTaGGAGAGGCCCCATGATGGCGTGGAAGGATGGCAGGGACCCGTA +
Preference number: 6 (lower is better)
Translates to: LLRVAAVRQVIREEG*ERPHDGVEGWQGPV
Trigger: TACGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGATCACCTGGCGGACTGCAGCCACCCGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
ENST00000507120.1
CDS CAA 72 bp GTGGCTGCAGTCCGCCAGGTGATCCGTGAGGAGGGCTaGGAGAGGCCCCATGATGGCGTGGAAGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: VAAVRQVIREEG*ERPHDGVEGWQ
Trigger: CTGCCATCCTTCCACGCCATCATGGGGCCTCTCCAAGCCCTCCTCACGGATCACCTGGCGGACTGCAGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
ENST00000507120.1
CDS GCA 72 bp AGTCTACTCGCCCAGCGGAGGGAGAGGCTGCTCTGCTaGCACGTGGCCACATCCTCTCTAGCAGACACCACG +
Preference number: 6 (lower is better)
Translates to: SLLAQRRERLLC*HVATSSLADTT
Trigger: CGTGGTGTCTGCTAGAGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCTGGGCGAGTAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp CTCAGTCTACTCGCCCAGCGGAGGGAGAGGCTGCTCTaGTGCCACGTGGCCACATCCTCTCTAGCAGACACC +
Preference number: 6 (lower is better)
Translates to: LSLLAQRRERLL*CHVATSSLADT
Trigger: GGTGTCTGCTAGAGAGGATGTGGCCACGTGGCAGCAGAGCAGCCTCTCCCTCCGCTGGGCGAGTAGACTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp GAGGGCTTGGAGAGGCCCCATGATGGCGTGGAAGGATaGCAGGGACCCGTACATGAGCACGCAGCGCTTCAG +
Preference number: 6 (lower is better)
Translates to: EGLERPHDGVEG*QGPVHEHAALQ
Trigger: CTGAAGCGCTGCGTGCTCATGTACGGGTCCCTGCCATCCTTCCACGCCATCATGGGGCCTCTCCAAGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
ENST00000507120.1
CDS CAA 90 bp CCACAGCCAGGCAGGACAGTCGGATGTGATTGGCCTCTGTCGAAGTaGGGGCCCTCAGTCTACTCGCCCAGCGGAGGGAGAGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PQPGRTVGCDWPLSK*GPSVYSPSGGRGCS
Trigger: AGAGCAGCCTCTCCCTCCGCTGGGCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCAATCACATCCGACTGTCCTGCCTGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp GCAGGACAGTCGGATGTGATTGGCCTCTGTCGAAGTTaGGGCCCTCAGTCTACTCGCCCAGCGGAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: AGQSDVIGLCRS*GPQSTRPAEGE
Trigger: CTCTCCCTCCGCTGGGCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCAATCACATCCGACTGTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp GGCAGGACAGTCGGATGTGATTGGCCTCTGTCGAAGTaGGGGCCCTCAGTCTACTCGCCCAGCGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GRTVGCDWPLSK*GPSVYSPSGGR
Trigger: TCTCCCTCCGCTGGGCGAGTAGACTGAGGGCCCCAACTTCGACAGAGGCCAATCACATCCGACTGTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp TGGAACTTCTGCCTGTTAACTTTCACCTCGAACGGATaGGAGTTGGCCTTCGCCGGGCCCCCTCGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: WNFCLLTFTSNG*ELAFAGPPRAP
Trigger: GGGAGCGCGAGGGGGCCCGGCGAAGGCCAACTCCAATCCGTTCGAGGTGAAAGTTAACAGGCAGAAGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 90 bp CAGCTCTTTCCGGGACTTCGGTTTCTCCCGCTCCTCGCCTTCCTGTaGAGTCTTCTTGTGAAGGAGCCCACCGCCTCCTCCAAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: QLFPGLRFLPLLAFL*SLLVKEPTASSKVG
Trigger: GCCCACTTTGGAGGAGGCGGTGGGCTCCTTCACAAGAAGACTCAACAGGAAGGCGAGGAGCGGGAGAAACCGAAGTCCCGGAAAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 72 bp ATCTGGGCTGTCGCTCTCCTCTGTGTCCTCCCCGCCTaGACTGTCACCTTCTTCCTCGTTGCTCTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: IWAVALLCVLPA*TVTFFLVALRV
Trigger: GACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACAGAGGAGAGCGACAGCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 72 bp CTGAGGTCGGGAATTCGAGACCAGCCAGCCGGGGTGTaGAAAGCTTCAGTGGGACAGGCTTGCTCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: LRSGIRDQPAGV*KASVGQACSSH
Trigger: GTGAGAAGAGCAAGCCTGTCCCACTGAAGCTTTTCACACCCCGGCTGGCTGGTCTCGAATTCCCGACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502735.5
CDS CAA 90 bp CTCTCCTCTGTGTCCTCCCCGCCTGAACTGTCACCTTCTTCCTCGTaGCTCTCAGGGTCACTGGCTTCCTTGCTTTGCTCTTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: LSSVSSPPELSPSSS*LSGSLASLLCSSWT
Trigger: TGTCCAGGAAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACACAGAGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp TCTTCCTCACTCTCCACGTTGGATTCCAGGTCCAAGTaGCTATCTGGGCTGTCGCTCTCCTCTGTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSSLSTLDSRSK*LSGLSLSSVSS
Trigger: GGAGGACACAGAGGAGAGCGACAGCCCAGATAGCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp GTGTCCTCCCCGCCTGAACTGTCACCTTCTTCCTCGTaGCTCTCAGGGTCACTGGCTTCCTTGCTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: VSSPPELSPSSS*LSGSLASLLCS
Trigger: AGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp TCGTGGCGCGTCTTCCGGCCCAGGATCTGGAACTTCTaGCTGTTAACTTTCACCTCGAACGGATTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: SWRVFRPRIWNF*LLTFTSNGLEL
Trigger: CAACTCCAATCCGTTCGAGGTGAAAGTTAACAGGCAGAAGTTCCAGATCCTGGGCCGGAAGACGCGCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp TGTCCTCCCCGCCTGAACTGTCACCTTCTTCCTCGTTaGTCTCAGGGTCACTGGCTTCCTTGCTTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: CPPRLNCHLLPR*SQGHWLPCFAL
Trigger: AAGAGCAAAGCAAGGAAGCCAGTGACCCTGAGAGCAACGAGGAAGAAGGTGACAGTTCAGGCGGGGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp GCCAATTCTGCCTCCGTCTTCATCCTGTTAGAGGGCTaGGCCTTCATTTCAAAGCCAAGCTCGCGAACCATC +
Preference number: 6 (lower is better)
Translates to: ANSASVFILLEG*AFISKPSSRTI
Trigger: GATGGTTCGCGAGCTTGGCTTTGAAATGAAGGCGCAGCCCTCTAACAGGATGAAGACGGAGGCAGAATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp TTGCTGGCTTCTCGTTTTCTTCCTCACTCTCCACGTTaGATTCCAGGTCCAAGTGGCTATCTGGGCTGTCGC +
Preference number: 6 (lower is better)
Translates to: LLASRFLPHSPR*IPGPSGYLGCR
Trigger: GCGACAGCCCAGATAGCCACTTGGACCTGGAATCCAACGTGGAGAGTGAGGAAGAAAACGAGAAGCCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp AGCAGTTCCGAGTTCTTCCCAAGCGCTCTGAAAGGGTaGACCAGAGTGGAACCTTGGCTTGCTTTGTTTGGA +
Preference number: 6 (lower is better)
Translates to: SSSEFFPSALKG*TRVEPWLALFG
Trigger: TCCAAACAAAGCAAGCCAAGGTTCCACTCTGGTGCACCCTTTCAGAGCGCTTGGGAAGAACTCGGAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp ATGAGCACATCCAACCCTGGCAATGCCGCCCGGCCTTaGGTCTCAATCATTTCTTCCATCTCATGCATCGCA +
Preference number: 6 (lower is better)
Translates to: MSTSNPGNAARP*VSIISSISCIA
Trigger: TGCGATGCATGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATTGCCAGGGTTGGATGTGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 90 bp CCTTGCCGCTTATCAACCCTTTCCCAGGAGTCTGCCTCTGCTCTTTaGCTGGCTTCTCGTTTTCTTCCTCACTCTCCACGTTGGATTCCA +
Preference number: 6 (lower is better)
Translates to: PCRLSTLSQESASAL*LASRFLPHSPRWIP
Trigger: TGGAATCCAACGTGGAGAGTGAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGACTCCTGGGAAAGGGTTGATAAGCGGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp TTGCCGCTTATCAACCCTTTCCCAGGAGTCTGCCTCTaGTCTTTTGCTGGCTTCTCGTTTTCTTCCTCACTC +
Preference number: 6 (lower is better)
Translates to: LPLINPFPGVCL*SFAGFSFSSSL
Trigger: GAGTGAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGACTCCTGGGAAAGGGTTGATAAGCGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 72 bp TTGTTTCCTTCTGCGAGACTCGGGTGGTTGCACTTCTaGATTCTCTCCACCACCAAAAGCTGCTCTTCCATC +
Preference number: 6 (lower is better)
Translates to: LFPSARLGWLHF*ILSTTKSCSSI
Trigger: GATGGAAGAGCAGCTTTTGGTGGTGGAGAGAATTCAGAAGTGCAACCACCCGAGTCTCGCAGAAGGAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 72 bp TCCATGATTTCTGAGAGTTGCATCCTCGCCAGGAACTaGTTGTCCTTGCGGATTTCTCGAACGGCCCCTTTA +
Preference number: 6 (lower is better)
Translates to: SMISESCILARN*LSLRISRTAPL
Trigger: TAAAGGGGCCGTTCGAGAAATCCGCAAGGACAATCAGTTCCTGGCGAGGATGCAACTCTCAGAAATCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS GCA 72 bp TATCAACCCTTTCCCAGGAGTCTGCCTCTGCTCTTTTaGTGGCTTCTCGTTTTCTTCCTCACTCTCCACGTT +
Preference number: 6 (lower is better)
Translates to: YQPFPRSLPLLF*WLLVFFLTLHV
Trigger: AACGTGGAGAGTGAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGACTCCTGGGAAAGGGTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp CATTCGCCTTCCTGTGTAGCCAGGCTGTTAAAAAGCTaGTTTACTTTCCGCTTTCTTTCCGCATCCCGTTCC +
Preference number: 6 (lower is better)
Translates to: HSPSCVARLLKS*FTFRFLSASRS
Trigger: GGAACGGGATGCGGAAAGAAAGCGGAAAGTAAAGCAGCTTTTTAACAGCCTGGCTACACAGGAAGGCGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS CAA 72 bp TTATCAACCCTTTCCCAGGAGTCTGCCTCTGCTCTTTaGCTGGCTTCTCGTTTTCTTCCTCACTCTCCACGT +
Preference number: 6 (lower is better)
Translates to: LSTLSQESASAL*LASRFLPHSPR
Trigger: ACGTGGAGAGTGAGGAAGAAAACGAGAAGCCAGCAAAAGAGCAGAGGCAGACTCCTGGGAAAGGGTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 72 bp TCTGAATTTCTTTCCAGTCTTGGTCTAGCTTCTCCGTaGGCTCGAGGGCATCTTCTCGTTGAGCTTGTCTCT +
Preference number: 6 (lower is better)
Translates to: SEFLSSLGLASP*ARGHLLVELVS
Trigger: AGAGACAAGCTCAACGAGAAGATGCCCTCGAGCTCACGGAGAAGCTAGACCAAGACTGGAAAGAAATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS TCA 72 bp TTTCCGCTTTCTTTCCGCATCCCGTTCCATGATTTCTaGGAGTTGCATCCTCGCCAGGAACTGATTGTCCTT +
Preference number: 6 (lower is better)
Translates to: FPLSFRIPFHDF*ELHPRQELIVL
Trigger: AAGGACAATCAGTTCCTGGCGAGGATGCAACTCTCAGAAATCATGGAACGGGATGCGGAAAGAAAGCGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS CAA 72 bp TTGCGGATTTCTCGAACGGCCCCTTTAAATTCACGCTaGTGTTTGTGGATCAGCCTCTTCCTTTCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: LRISRTAPLNSR*CLWISLFLSCS
Trigger: GGAACAGGAAAGGAAGAGGCTGATCCACAAACACAAGCGTGAATTTAAAGGGGCCGTTCGAGAAATCCGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS GCA 72 bp GCCCGGCCTTTGGTCTCAATCATTTCTTCCATCTCATaGATCGCATCTCGGAGAACAAATTTGATAGCGTCA +
Preference number: 6 (lower is better)
Translates to: ARPLVSIISSIS*IASRRTNLIAS
Trigger: TGACGCTATCAAATTTGTTCTCCGAGATGCGATGCATGAGATGGAAGAAATGATTGAGACCAAAGGCCGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp GTGCACAACCAACTTATCAATGACTGTGAGGTCTGGTaGGTCATCTGTAGCCAAATCGCCAACGTATTCCAA +
Preference number: 6 (lower is better)
Translates to: VHNQLINDCEVW*VICSQIANVFQ
Trigger: TTGGAATACGTTGGCGATTTGGCTACAGATGACCCACCAGACCTCACAGTCATTGATAAGTTGGTTGTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp GATTTTCAAATAAATGAGCACATCCAACCCTGGCAATaGCGCCCGGCCTTTGGTCTCAATCATTTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: DFQINEHIQPWQ*RPAFGLNHFFH
Trigger: ATGGAAGAAATGATTGAGACCAAAGGCCGGGCGGCATTGCCAGGGTTGGATGTGCTCATTTATTTGAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp GCAAACCTCTTCATCATCTTCTCCTCGGGGCTCATGTaGCTGTTGTATTCTCCGAAGCGTTTATCTCTGAAT +
Preference number: 6 (lower is better)
Translates to: ANLFIIFSSGLM*LLYSPKRLSLN
Trigger: ATTCAGAGATAAACGCTTCGGAGAATACAACAGCAACATGAGCCCCGAGGAGAAGATGATGAAGAGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp ATTTCTCGAACGGCCCCTTTAAATTCACGCTTGTGTTaGTGGATCAGCCTCTTCCTTTCCTGTTCCTCCTTA +
Preference number: 6 (lower is better)
Translates to: ISRTAPLNSRLC*WISLFLSCSSL
Trigger: TAAGGAGGAACAGGAAAGGAAGAGGCTGATCCACAAACACAAGCGTGAATTTAAAGGGGCCGTTCGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314262.10
ENST00000416614.7
CDS CAA 90 bp TGTTCCAGAGCAAACCTCTTCATCATCTTCTCCTCGGGGCTCATGTaGCTGTTGTATTCTCCGAAGCGTTTATCTCTGAATACATTGGAT +
Preference number: 6 (lower is better)
Translates to: CSRANLFIIFSSGLM*LLYSPKRLSLNTLD
Trigger: ATCCAATGTATTCAGAGATAAACGCTTCGGAGAATACAACAGCAACATGAGCCCCGAGGAGAAGATGATGAAGAGGTTTGCTCTGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CCA 72 bp CCAAGAAGAAAATTAATAAGCTCAGGTATAAACCTCTaGGACAAAGCCACATACTCCAGGAACAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: PRRKLISSGINL*DKATYSRNRQH
Trigger: GTGCTGCCTGTTCCTGGAGTATGTGGCTTTGTCCCAGAGGTTTATACCTGAGCTTATTAATTTTCTTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 72 bp TCTTCCATCTCATGCATCGCATCTCGGAGAACAAATTaGATAGCGTCACTTGCAGATTCAGGAAACATCTGG +
Preference number: 6 (lower is better)
Translates to: SSISCIASRRTN*IASLADSGNIW
Trigger: CCAGATGTTTCCTGAATCTGCAAGTGACGCTATCAAATTTGTTCTCCGAGATGCGATGCATGAGATGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 90 bp AGAGCAAACCTCTTCATCATCTTCTCCTCGGGGCTCATGTTGCTGTaGTATTCTCCGAAGCGTTTATCTCTGAATACATTGGATTTATCC +
Preference number: 6 (lower is better)
Translates to: RANLFIIFSSGLMLL*YSPKRLSLNTLDLS
Trigger: GGATAAATCCAATGTATTCAGAGATAAACGCTTCGGAGAATACAACAGCAACATGAGCCCCGAGGAGAAGATGATGAAGAGGTTTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS GCA 72 bp GTCACTGTCCACAATGTCATTATGCTTCTCGATGTCTaGCAAAGACTGGCCATAATGAGTCAATTCTTCATC +
Preference number: 6 (lower is better)
Translates to: VTVHNVIMLLDV*QRLAIMSQFFI
Trigger: GATGAAGAATTGACTCATTATGGCCAGTCTTTGGCAGACATCGAGAAGCATAATGACATTGTGGACAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5
CDS CAA 90 bp CTCATGTTGCTGTTGTATTCTCCGAAGCGTTTATCTCTGAATACATaGGATTTATCCCTTTCTTTGTACTCTTTTAGTAAAGTCTGTGTA +
Preference number: 6 (lower is better)
Translates to: LMLLLYSPKRLSLNT*DLSLSLYSFSKVCV
Trigger: TACACAGACTTTACTAAAAGAGTACAAAGAAAGGGATAAATCCAATGTATTCAGAGATAAACGCTTCGGAGAATACAACAGCAACATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314262.10
ENST00000398071.4
ENST00000416614.7
ENST00000502735.5