RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOL9 (Homo sapiens)

Ensembl gene IDs: ENSG00000162408

Ensembl transcript IDs: ENST00000377705.6, ENST00000460777.1, ENST00000462798.1, ENST00000464383.1, ENST00000464665.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGATGGGCTGTAACCATCCACACTGGCTCCAAGGAAGCAGACCGCTaGACCCCAGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGC +
Preference number: 1 (lower is better)
Translates to: GWAVTIHTGSKEADR*TPALHMAQARPVAS
Trigger: GCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCTGGGGTCCAGCGGTCTGCTTCCTTGGAGCCAGTGTGGATGGTTACAGCCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp CAGACCGCTGGACCCCAGCTCTGCACATGGCTCAGGCAAGGCCCGTaGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCAGGTCGGC +
Preference number: 1 (lower is better)
Translates to: QTAGPQLCTWLRQGP*RALVSIMLEILQVG
Trigger: GCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCTGGGGTCCAGCGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp ACACTGGCTCCAAGGAAGCAGACCGCTGGACCCCAGCTCTGCACATaGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTT +
Preference number: 1 (lower is better)
Translates to: TLAPRKQTAGPQLCT*LRQGPWRALVSIML
Trigger: AAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCTGGGGTCCAGCGGTCTGCTTCCTTGGAGCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp CAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATaGCAGTCTGGTCACCAGCCGCCGGCACCCCCAGGAAAAAGCTCT +
Preference number: 1 (lower is better)
Translates to: QPRGQSRKHQGERGE*QSGHQPPAPPGKSS
Trigger: AGAGCTTTTTCCTGGGGGTGCCGGCGGCTGGTGACCAGACTGCCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp GCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATaGTTGAGATCCTGCAGGTCGGCCTTCTTCCTTCCTTCTCGGTAC +
Preference number: 1 (lower is better)
Translates to: AHGSGKARGEPLYPL*LRSCRSAFFLPSRY
Trigger: GTACCGAGAAGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTaGCTCCAAGGAAGCAGACCGCTGGACCCCAGCTCTGCACATGGC +
Preference number: 1 (lower is better)
Translates to: TKYNCTKWMGCNHPH*LQGSRPLDPSSAHG
Trigger: GCCATGTGCAGAGCTGGGGTCCAGCGGTCTGCTTCCTTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 90 bp ATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTaGGATCCTGCAGGTCGGCCTTCTTCCTTCCTTCTCGGTACATTG +
Preference number: 1 (lower is better)
Translates to: MAQARPVASPCIHYA*DPAGRPSSFLLGTL
Trigger: CAATGTACCGAGAAGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp GGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTaGAGGTCGGCCTTCTTCCTTCCTTCTCGGTACATTGTAATGGCC +
Preference number: 1 (lower is better)
Translates to: GKARGEPLYPLCLRS*RSAFFLPSRYIVMA
Trigger: GGCCATTACAATGTACCGAGAAGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp GCCACTGCCATCAATAATGGGATGAATTGTCATCCTGGAGAATGGTaGTGCTGCAGGTCTGACCGGCACAAGCTAGACCTGACAGAGGCC +
Preference number: 1 (lower is better)
Translates to: ATAINNGMNCHPGEW*CCRSDRHKLDLTEA
Trigger: GGCCTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATTGATGGCAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp GGTCTGCCAGTCCTTCTTCCTTCAAAACAGCCCAGTCTCCAGCTCTaGCCTGTGGTTGTCTCTGGCCTCAGATCAGAAGTCAATTTGGAC +
Preference number: 1 (lower is better)
Translates to: GLPVLLPSKQPSLQL*PVVVSGLRSEVNLD
Trigger: GTCCAAATTGACTTCTGATCTGAGGCCAGAGACAACCACAGGGCAGAGCTGGAGACTGGGCTGTTTTGAAGGAAGAAGGACTGGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp GCCATCAATAATGGGATGAATTGTCATCCTGGAGAATGGTGCTGCTaGAGGTCTGACCGGCACAAGCTAGACCTGACAGAGGCCTTGGCT +
Preference number: 1 (lower is better)
Translates to: AINNGMNCHPGEWCC*RSDRHKLDLTEALA
Trigger: AGCCAAGGCCTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATTGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp ACTGCCATCAATAATGGGATGAATTGTCATCCTGGAGAATGGTGCTaGTGCAGGTCTGACCGGCACAAGCTAGACCTGACAGAGGCCTTG +
Preference number: 1 (lower is better)
Translates to: TAINNGMNCHPGEWC*CRSDRHKLDLTEAL
Trigger: CAAGGCCTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATTGATGGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp AAGGCCACTGCCATCAATAATGGGATGAATTGTCATCCTGGAGAATaGTGCTGCTGCAGGTCTGACCGGCACAAGCTAGACCTGACAGAG +
Preference number: 1 (lower is better)
Translates to: KATAINNGMNCHPGE*CCCRSDRHKLDLTE
Trigger: CTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATTGATGGCAGTGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp CGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGTATCCTaGTGTCTTAAATGCAGAAATGATGTGACCTGGTCCCATCACCCG +
Preference number: 1 (lower is better)
Translates to: RWSQYQFEPQPQEVS*CLKCRNDVTWSHHP
Trigger: CGGGTGATGGGACCAGGTCACATCATTTCTGCATTTAAGACAGCAGGATACTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp ACCTTGATTGAATATAACAGACCAAGTACAACTGCACCAAATGGATaGGCTGTAACCATCCACACTGGCTCCAAGGAAGCAGACCGCTGG +
Preference number: 1 (lower is better)
Translates to: TLIEYNRPSTTAPNG*AVTIHTGSKEADRW
Trigger: CCAGCGGTCTGCTTCCTTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGTCTGTTATATTCAATCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp CCCCAGGAAGTATCCTGCTGTCTTAAATGCAGAAATGATGTGACCTaGTCCCATCACCCGTTTACACAAACCACTTCCAACCTAGAGGAC +
Preference number: 1 (lower is better)
Translates to: PQEVSCCLKCRNDVT*SHHPFTQTTSNLED
Trigger: GTCCTCTAGGTTGGAAGTGGTTTGTGTAAACGGGTGATGGGACCAGGTCACATCATTTCTGCATTTAAGACAGCAGGATACTTCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 90 bp GCAGAACCCCAGCTGAGACACCTCACAGTGTCAGTGATTACTATGTaGTGGTGGGCTGGAGGATCATTTTCTACATGTGTAAGCTGCTTA +
Preference number: 1 (lower is better)
Translates to: AEPQLRHLTVSVITM*WWAGGSFSTCVSCL
Trigger: TAAGCAGCTTACACATGTAGAAAATGATCCTCCAGCCCACCACCACATAGTAATCACTGACACTGTGAGGTGTCTCAGCTGGGGTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 90 bp TACCAGTTTGAACCTCAGCCCCAGGAAGTATCCTGCTGTCTTAAATaGAGAAATGATGTGACCTGGTCCCATCACCCGTTTACACAAACC +
Preference number: 1 (lower is better)
Translates to: YQFEPQPQEVSCCLK*RNDVTWSHHPFTQT
Trigger: GGTTTGTGTAAACGGGTGATGGGACCAGGTCACATCATTTCTGCATTTAAGACAGCAGGATACTTCCTGGGGCTGAGGTTCAAACTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 90 bp GATTTGAACTCAGAGCTCTATAATCAAAGCCTGCTGTCTTATCCATaGTCTTGCCATCCAAACCCAAAAACAAATGACCTAGGCCGGGCG +
Preference number: 1 (lower is better)
Translates to: DLNSELYNQSLLSYP*SCHPNPKTNDLGRA
Trigger: CGCCCGGCCTAGGTCATTTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTATAGAGCTCTGAGTTCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 90 bp CAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAATaGCCTCCAGTGAGTATAACTGTAAGATACACGAAAGTGGAGAAA +
Preference number: 1 (lower is better)
Translates to: QLQGTSFILPEPCCK*PPVSITVRYTKVEK
Trigger: TTTCTCCACTTTCGTGTATCTTACAGTTATACTCACTGGAGGTCATTTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 90 bp ATCTTCCTCCAAGTTACACCACTGACAAGTGGTAGAGCCAGGATTTaGACTCAGAGCTCTATAATCAAAGCCTGCTGTCTTATCCATGAT +
Preference number: 1 (lower is better)
Translates to: IFLQVTPLTSGRARI*TQSSIIKACCLIHD
Trigger: ATCATGGATAAGACAGCAGGCTTTGATTATAGAGCTCTGAGTTCAAATCCTGGCTCTACCACTTGTCAGTGGTGTAACTTGGAGGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCTCAGGCAAGGCCCGTaGCGAGCCCTTGTATCCATT +
Preference number: 2 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSLRQGP*RALVSI
Trigger: AATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 90 bp GACCCCAGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTaGTATCCATTATGCTTGAGATCCTGCAGGTCGGCCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: DPSSAHGSGKARGEP*YPLCLRSCRSAFFL
Trigger: AAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 90 bp TGCTGCTGCAGGTCTGACCGGCACAAGCTAGACCTGACAGAGGCCTaGGCTCCCTGTCTCCGAACCTCCTTCCCTAAACCCTGTACAGCT +
Preference number: 2 (lower is better)
Translates to: CCCRSDRHKLDLTEA*APCLRTSFPKPCTA
Trigger: AGCTGTACAGGGTTTAGGGAAGGAGGTTCGGAGACAGGGAGCCAAGGCCTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR TCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTTGTATCCATTATGCTTaGGATCCTGCAGGTCGGCCT +
Preference number: 2 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSCIHYA*DPAGRP
Trigger: AGGCCGACCTGCAGGATCTCAAGCATAATGGATACA...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR TCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAATGCAGAAATGATGTaGCCTGGTCCCATCACCCGT +
Preference number: 2 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSNAEMM*PGPITR
Trigger: ACGGGTGATGGGACCAGGTCACATCATTTCTGCATT...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCCATCATGTCTCTTGTaGTCAGGCTTGAGACAAAGC +
Preference number: 2 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSPSCLL*SGLRQS
Trigger: GCTTTGTCTCAAGCCTGACCACAAGAGACATGATGG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 90 bp CATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTaGAGATCCTGCAGGTCGGCCTTCTTCCTTCCTTCTCGGTACATT +
Preference number: 2 (lower is better)
Translates to: HGSGKARGEPLYPLC*RSCRSAFFLPSRYI
Trigger: AATGTACCGAGAAGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR TCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGTGCTGCTGCAGGTCTaGCCGGCACAAGCTAGACCT +
Preference number: 2 (lower is better)
Translates to: EASYTLGVTDRFYMPETVVLLQV*PAQARP
Trigger: AGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCAC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAGTGACCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPVTSAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGGTCAC...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR TCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGATGGTCTCAATCTCCTaGCCTCGTGAACCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKMVSIS*PREPPA
Trigger: GGCAGGCGGTTCACGAGGTCAGGAGATTGAGACCAT...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGAGGGTTGTTCATAGGTaGAAGTTCAGGTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKRVVHR*KFRSSL
Trigger: GAGGCTGGACCTGAACTTGCACCTATGAACAACCCT...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGACTGCACCAAATGGATaGGCTGTAACCATCCACACT +
Preference number: 2 (lower is better)
Translates to: EASYTLGVTDRFYMPETVTAPNG*AVTIHT
Trigger: AGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCATTATGCTTGAGATCCTaGAGGTCGGCCTTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPLCLRS*RSAFFL
Trigger: AAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAA...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCACCCAGTCTCCAGCTCTaGCCTGTGGTTGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAPSLQL*PVVVSG
Trigger: GCCAGAGACAACCACAGGGCAGAGCTGGAGACTGGG...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGTACAACTGCACCAAATaGATGGGCTGTAACCATCCA +
Preference number: 2 (lower is better)
Translates to: EASYTLGVTDRFYMPETVYNCTK*MGCNHP
Trigger: TGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTA...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 90 bp GCTGGGAAGATGGAATTCTGTCAAAGCGGTGGTCACAATACCAGTTaGAACCTCAGCCCCAGGAAGTATCCTGCTGTCTTAAATGCAGAA +
Preference number: 2 (lower is better)
Translates to: AGKMEFCQSGGHNTS*NLSPRKYPAVLNAE
Trigger: TTCTGCATTTAAGACAGCAGGATACTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTCCATCTTCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGACACAAACTGTTCTCTaGTGTTTTACTCCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: EASYTLGVTDRFYMPETVTQTVL*CFTPSG
Trigger: TCCAGAGGGAGTAAAACAGCAGAGAACAGTTTGTGT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGCTGTTTTACTCCCTCTaGACAGCAAGTATGAGTATC +
Preference number: 2 (lower is better)
Translates to: EASYTLGVTDRFYMPETVLFYSL*TASMSI
Trigger: GATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAGGAGAACGTGGAGAATaGCAGTCTGGTCACCAGCCG +
Preference number: 2 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAGERGE*QSGHQP
Trigger: CGGCTGGTGACCAGACTGCCATTCTCCACGTTCTCC...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACTGAGATCAGGCCACTaGACTCCAGCCTTGGCGACA +
Preference number: 2 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQLRSGH*TPALAT
Trigger: TGTCGCCAAGGCTGGAGTGCAGTGGCCTGATCTCAG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 90 bp GCTAATAAGGGCACCATTCATGGCCATGAAACTCCATCATGTCTCTaGTGGTCAGGCTTGAGACAAAGCTTTCTGGTAGGAAAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: ANKGTIHGHETPSCL*WSGLRQSFLVGKFL
Trigger: AAGAAACTTTCCTACCAGAAAGCTTTGTCTCAAGCCTGACCACAAGAGACATGATGGAGTTTCATGGCCATGAATGGTGCCCTTATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR TCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAGTCACAATACCAGTTTaGACCTCAGCCCCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAVTIPV*TSAPGS
Trigger: ACTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGAC...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAAAAAGGAAGGGCTCTTaGGTCCAAATTTATATCTAT +
Preference number: 2 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPKRKGS*VQIYIY
Trigger: ATAGATATAAATTTGGACCCAAGAGCCCTTCCTTTT...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACCCTTGTATCCATTATaGTTGAGATCCTGCAGGTCG +
Preference number: 2 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQPLYPL*LRSCRS
Trigger: CGACCTGCAGGATCTCAAGCATAATGGATACAAGGG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACAGACCAAGTACAACTaGACCAAATGGATGGGCTGT +
Preference number: 2 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQQTKYN*TKWMGC
Trigger: ACAGCCCATCCATTTGGTGCAGTTGTACTTGGTCTG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR TCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCATCTGGACAGCAAGTATaGGTATCACACAGAAGACTA +
Preference number: 2 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAASGQQV*VSHRRL
Trigger: TAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGA...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAATTCTGTCAAAGCGGTaGTCACAATACCAGTTTGAA +
Preference number: 2 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAILSKR*SQYQFE
Trigger: TTCAAACTGGTATTGTGACCACCGCTTTGACAGAAT...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 90 bp GTGAGTATAACTGTAAGATACACGAAAGTGGAGAAAGGCAAAACATaGATGGTGATGGATTGTCTTAAAATTCTTTACAAGGCCAGCACA +
Preference number: 2 (lower is better)
Translates to: VSITVRYTKVEKGKT*MVMDCLKILYKAST
Trigger: TGTGCTGGCCTTGTAAAGAATTTTAAGACAATCCATCACCATCAATGTTTTGCCTTTCTCCACTTTCGTGTATCTTACAGTTATACTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp GGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATaGCAGTCTGGTCACCAGCCGCCGGCACCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: GQSRKHQGERGE*QSGHQPPAPPG
Trigger: TCCTGGGGGTGCCGGCGGCTGGTGACCAGACTGCCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp GTAACCATCCACACTGGCTCCAAGGAAGCAGACCGCTaGACCCCAGCTCTGCACATGGCTCAGGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: VTIHTGSKEADR*TPALHMAQARP
Trigger: GGGCCTTGCCTGAGCCATGTGCAGAGCTGGGGTCCAGCGGTCTGCTTCCTTGGAGCCAGTGTGGATGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp TCGGAAGCACCAGGGAGAACGTGGAGAATGGCAGTCTaGTCACCAGCCGCCGGCACCCCCAGGAAAAAGCTC +
Preference number: 3 (lower is better)
Translates to: SEAPGRTWRMAV*SPAAGTPRKKL
Trigger: GAGCTTTTTCCTGGGGGTGCCGGCGGCTGGTGACCAGACTGCCATTCTCCACGTTCTCCCTGGTGCTTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp GGACCCCAGCTCTGCACATGGCTCAGGCAAGGCCCGTaGCGAGCCCTTGTATCCATTATGCTTGAGATCCTG +
Preference number: 3 (lower is better)
Translates to: GPQLCTWLRQGP*RALVSIMLEIL
Trigger: CAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCTGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCGGTCACAATACCAGTTaGAACCTCAGCCCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGGHNTS*NLSPRK
Trigger: CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACC...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTTTAAGTCCTTTGCTGTaGGGTCTAAGAGGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSLSPLL*GLRGAE
Trigger: CTCAGCACCTCTTAGACCCAACAGCAAAGGACTTAA...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 72 bp GAATTGTCATCCTGGAGAATGGTGCTGCTGCAGGTCTaGCCGGCACAAGCTAGACCTGACAGAGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: ELSSWRMVLLQV*PAQARPDRGLG
Trigger: GCCAAGGCCTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp TCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATaGTTGAGATCCTGCAGGTCGGCCTTCTTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: SGKARGEPLYPL*LRSCRSAFFLP
Trigger: AGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp GTCCTTCTTCCTTCAAAACAGCCCAGTCTCCAGCTCTaGCCTGTGGTTGTCTCTGGCCTCAGATCAGAAGTC +
Preference number: 3 (lower is better)
Translates to: VLLPSKQPSLQL*PVVVSGLRSEV
Trigger: GACTTCTGATCTGAGGCCAGAGACAACCACAGGGCAGAGCTGGAGACTGGGCTGTTTTGAAGGAAGAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp CGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTaGAGGTCGGCCTTCTTCCTTCCTTCTCGGTACATT +
Preference number: 3 (lower is better)
Translates to: RGEPLYPLCLRS*RSAFFLPSRYI
Trigger: AATGTACCGAGAAGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp CCACAGGCAATAATGGAGCTTTCCCAAGAGCTGGTCTaGCAGTCCTTCTTCCTTCAAAACAGCCCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: PQAIMELSQELV*QSFFLQNSPVS
Trigger: GGAGACTGGGCTGTTTTGAAGGAAGAAGGACTGGCAGACCAGCTCTTGGGAAAGCTCCATTATTGCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp AATGGGATGAATTGTCATCCTGGAGAATGGTGCTGCTaGAGGTCTGACCGGCACAAGCTAGACCTGACAGAG +
Preference number: 3 (lower is better)
Translates to: NGMNCHPGEWCC*RSDRHKLDLTE
Trigger: CTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGACTCCATCATGTCTCTaGTGGTCAGGCTTGAGACAA +
Preference number: 3 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWTPSCL*WSGLRQ
Trigger: TTGTCTCAAGCCTGACCACAAGAGACATGATGGAGT...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCCGAGGTTTTCCAGATTaGAAAGAAATTTCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGRGFPD*KEISSA
Trigger: TGCTGAGGAAATTTCTTTCAAATCTGGAAAACCTCG...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp GCCATCAATAATGGGATGAATTGTCATCCTGGAGAATaGTGCTGCTGCAGGTCTGACCGGCACAAGCTAGAC +
Preference number: 3 (lower is better)
Translates to: AINNGMNCHPGE*CCCRSDRHKLD
Trigger: GTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATTGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGCTCTTGTGGTCAGGCTaGAGACAAAGCTTTCTGGTA +
Preference number: 3 (lower is better)
Translates to: EASYTLGVTDRFYMPETVLLWSG*RQSFLV
Trigger: TACCAGAAAGCTTTGTCTCAAGCCTGACCACAAGAG...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCATTGTATCCATTATGCTaGAGATCCTGCAGGTCGGCC +
Preference number: 3 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPLYPLC*RSCRSA
Trigger: GGCCGACCTGCAGGATCTCAAGCATAATGGATACAA...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAAGCTCTGCCCTGTGGTaGTCTCTGGCCTCAGATCAG +
Preference number: 3 (lower is better)
Translates to: NANAITGHQFHSSRALLQSSALW*SLASDQ
Trigger: CTGATCTGAGGCCAGAGACAACCACAGGGCAGAGCT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp GAACCTCAGCCCCAGGAAGTATCCTGCTGTCTTAAATaGAGAAATGATGTGACCTGGTCCCATCACCCGTTT +
Preference number: 3 (lower is better)
Translates to: EPQPQEVSCCLK*RNDVTWSHHPF
Trigger: AAACGGGTGATGGGACCAGGTCACATCATTTCTGCATTTAAGACAGCAGGATACTTCCTGGGGCTGAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp AATAATGGGATGAATTGTCATCCTGGAGAATGGTGCTaGTGCAGGTCTGACCGGCACAAGCTAGACCTGACA +
Preference number: 3 (lower is better)
Translates to: NNGMNCHPGEWC*CRSDRHKLDLT
Trigger: TGTCAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR GCA 72 bp ATCAATAATGGGATGAATTGTCATCCTGGAGAATGGTaGTGCTGCAGGTCTGACCGGCACAAGCTAGACCTG +
Preference number: 3 (lower is better)
Translates to: INNGMNCHPGEW*CCRSDRHKLDL
Trigger: CAGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATGACAATTCATCCCATTATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAGACCTGACAGAGGCCTaGGCTCCCTGTCTCCGAACC +
Preference number: 3 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQDLTEA*APCLRT
Trigger: GGTTCGGAGACAGGGAGCCAAGGCCTCTGTCAGGTC...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp AGCAACAAGTGGGGGTTTATGAAAAACTTTCAGGAATaGGTTATCTATGGTGGCCGTGGAGCTTGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: SNKWGFMKNFQE*VIYGGRGACFL
Trigger: GAGGAAGCAAGCTCCACGGCCACCATAGATAACCCATTCCTGAAAGTTTTTCATAAACCCCCACTTGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp AGACACCTCACAGTGTCAGTGATTACTATGTGGTGGTaGGCTGGAGGATCATTTTCTACATGTGTAAGCTGC +
Preference number: 3 (lower is better)
Translates to: RHLTVSVITMWW*AGGSFSTCVSC
Trigger: GCAGCTTACACATGTAGAAAATGATCCTCCAGCCCACCACCACATAGTAATCACTGACACTGTGAGGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp CTGAGACACCTCACAGTGTCAGTGATTACTATGTGGTaGTGGGCTGGAGGATCATTTTCTACATGTGTAAGC +
Preference number: 3 (lower is better)
Translates to: LRHLTVSVITMW*WAGGSFSTCVS
Trigger: GCTTACACATGTAGAAAATGATCCTCCAGCCCACCACCACATAGTAATCACTGACACTGTGAGGTGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGAAGGCAAACCTAGATaGAATGCAAATGCAATTACA +
Preference number: 3 (lower is better)
Translates to: EASYTLGVTDRFYMPETVEGKPR*NANAIT
Trigger: TGTAATTGCATTTGCATTCAATCTAGGTTTGCCTTC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp GTTTATGAAAAACTTTCAGGAATGGGTTATCTATGGTaGCCGTGGAGCTTGCTTCCTCAAGGGCTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: VYEKLSGMGYLW*PWSLLPQGLFD
Trigger: GTCAAAGAGCCCTTGAGGAAGCAAGCTCCACGGCCACCATAGATAACCCATTCCTGAAAGTTTTTCATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGAAAAAGGAAGGGCTCTaGGGTCCAAATTTATATCTA +
Preference number: 3 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKKKEGL*GPNLYL
Trigger: TAGATATAAATTTGGACCCAAGAGCCCTTCCTTTTT...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 72 bp AGGAAGTATCCTGCTGTCTTAAATGCAGAAATGATGTaGCCTGGTCCCATCACCCGTTTACACAAACCACTT +
Preference number: 3 (lower is better)
Translates to: RKYPAVLNAEMM*PGPITRLHKPL
Trigger: AAGTGGTTTGTGTAAACGGGTGATGGGACCAGGTCACATCATTTCTGCATTTAAGACAGCAGGATACTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 72 bp GGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAATaGCCTCCAGTGAGTATAACTGTAAGATACACGAAA +
Preference number: 3 (lower is better)
Translates to: GTSFILPEPCCK*PPVSITVRYTK
Trigger: TTTCGTGTATCTTACAGTTATACTCACTGGAGGTCATTTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 72 bp CAAGTTACACCACTGACAAGTGGTAGAGCCAGGATTTaGACTCAGAGCTCTATAATCAAAGCCTGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: QVTPLTSGRARI*TQSSIIKACCL
Trigger: AAGACAGCAGGCTTTGATTATAGAGCTCTGAGTTCAAATCCTGGCTCTACCACTTGTCAGTGGTGTAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CCA 72 bp TGGCACACAAACTGTTCTCTGCTGTTTTACTCCCTCTaGACAGCAAGTATGAGTATCACACAGAAGACTAGA +
Preference number: 3 (lower is better)
Translates to: WHTNCSLLFYSL*TASMSITQKTR
Trigger: TCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAGCAGAGAACAGTTTGTGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACATTCTTCCAGAGCCTaGCTGCAAATGACCTCCAGT +
Preference number: 3 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQHSSRA*LQMTSS
Trigger: ACTGGAGGTCATTTGCAGCAAGGCTCTGGAAGAATG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 72 bp GTTCTCTGCTGTTTTACTCCCTCTGGACAGCAAGTATaGGTATCACACAGAAGACTAGAACAAATTCTAGCT +
Preference number: 3 (lower is better)
Translates to: VLCCFTPSGQQV*VSHRRLEQILA
Trigger: AGCTAGAATTTGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAGCAGAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR-3UTR CAA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAACTGAAGAAAAAGACTaGACCTTCATACAGGCCGCA +
Preference number: 3 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQTEEKD*TFIQAA
Trigger: TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGT...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR TCA 72 bp TCAGAGCTCTATAATCAAAGCCTGCTGTCTTATCCATaGTCTTGCCATCCAAACCCAAAAACAAATGACCTA +
Preference number: 3 (lower is better)
Translates to: SELYNQSLLSYP*SCHPNPKTNDL
Trigger: TAGGTCATTTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTATAGAGCTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCGCTGGGGCCGGGCCTTaGGGACCCGCAGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCAGAGP*GPAAKW
Trigger: CCACTTGGCTGCGGGTCCGCAAGGCCCGGCCCCAGC...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCCCGGGGGCACAGGGGTaGGGATGTGGTACAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCPGAQG*GCGTAA
Trigger: AGCGGCTGTACCACATCCTCACCCCTGTGCCCCCGG...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCCCGGACGCCTGGGCTTaGAGTAACCGCCACCGTAGG +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCPDAWA*SNRHRR
Trigger: CCTACGGTGGCGGTTACTGCAAGCCCAGGCGTCCGG...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCTTGCCCAGGCTGGAGTaGAGTGGCGTGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGLPRLE*SGVTSA
Trigger: AGCCGAGGTCACGCCACTGCACTCCAGCCTGGGCAA...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCCTGGAGAATGGTGCTaGTGCAGGTCTGACCGGCAC +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSPGEWC*CRSDRH
Trigger: GTGCCGGTCAGACCTGCAGCAGCACCATTCTCCAGG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCGGACCCGCAGCCAAGTaGAACGGCAGGAACCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCGPAAK*NGRNPA
Trigger: AGCGGGGTTCCTGCCGTTCCACTTGGCTGCGGGTCC...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTCCACGCCGGACGCCTaGGCTTGCAGTAACCGCCAC +
Preference number: 4 (lower is better)
Translates to: SSAHGSGKARGEPLYPLCSTPDA*ACSNRH
Trigger: GTGGCGGTTACTGCAAGCCCAGGCGTCCGGCGTGGA...GCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCCCGAGATCACTCCACTaGACCCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: SSAHGSGKARGEPLYPLCPRSLH*TPAWAT
Trigger: TGTCGCCCAGGCTGGGGTGCAGTGGAGTGATCTCGG...GCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTTTTGGGAGGCCAAGGTaGACGGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSFGRPR*TDHEVR
Trigger: CCTGACCTCGTGATCCGTCCACCTTGGCCTCCCAAA...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGCCGCACCGGTGGGATaGGGAGAGGCCGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVAAPVG*GEAGGN
Trigger: GTTGCCACCGGCCTCTCCTCATCCCACCGGTGCGGC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCGGCAAGAGAATCACTTaGACCCGGGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSAHGSGKARGEPLYPLCGKRIT*TREAEV
Trigger: CACCTCCGCCTCCCGGGTTCAAGTGATTCTCTTGCC...GCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGCCCCAGCTCTGCACATaGCTCAGGCAAGGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWPQLCT*LRQGPW
Trigger: CCACGGGCCTTGCCTGAGCCATGTGCAGAGCTGGGG...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCAAGGAAGCAGACCGCTaGACCCCAGCTCTGCACATG +
Preference number: 4 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGKEADR*TPALHM
Trigger: CATGTGCAGAGCTGGGGTCCAGCGGTCTGCTTCCTT...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTGCACCAGGGAGAACGTaGAGAATGGCAGTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSAPGRT*RMAVWS
Trigger: TGACCAGACTGCCATTCTCCACGTTCTCCCTGGTGC...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 72 bp TCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTaGTATCCATTATGCTTGAGATCCTGCAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SAHGSGKARGEP*YPLCLRSCRSA
Trigger: GGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 72 bp AGGTCTGACCGGCACAAGCTAGACCTGACAGAGGCCTaGGCTCCCTGTCTCCGAACCTCCTTCCCTAAACCC +
Preference number: 4 (lower is better)
Translates to: RSDRHKLDLTEA*APCLRTSFPKP
Trigger: GGGTTTAGGGAAGGAGGTTCGGAGACAGGGAGCCAAGGCCTCTGTCAGGTCTAGCTTGTGCCGGTCAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAACGGCTGAGGATGAGCTaGGGCCGGGCCTTGCGGACC +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQRLRMS*GRALRT
Trigger: GGTCCGCAAGGCCCGGCCCCAGCTCATCCTCAGCCG...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGGTGCTGCTGCAGGTCTaGCCGGCACAAGCTAGACCT +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWVLLQV*PAQARP
Trigger: AGGTCTAGCTTGTGCCGGTCAGACCTGCAGCAGCAC...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCACAGGGGTGAGGATGTaGTACAGCCGCTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCTGVRM*YSRFSM
Trigger: CATGGAGAAGCGGCTGTACCACATCCTCACCCCTGT...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCTTCACAGGAAACATTaGCTAACTCTTCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSLHRKH*LTLPGL
Trigger: CAGCCCTGGAAGAGTTAGTCAATGTTTCCTGTGAAG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCATCGGATCAGATCAATaGGAAGCAGGAGCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCIGSDQ*EAGAPG
Trigger: ACCAGGGGCTCCTGCTTCTCATTGATCTGATCCGAT...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCGTCACAATACCAGTTTaGACCTCAGCCCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGVTIPV*TSAPGS
Trigger: ACTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGAC...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGAGGCGGAGGTGGCAGTaGGCCCAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKRRRWQ*AQIAPL
Trigger: CAGTGGCGCAATCTGGGCTCACTGCCACCTCCGCCT...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCAGACCAAGTACAACTaGACCAAATGGATGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSQTKYN*TKWMGC
Trigger: ACAGCCCATCCATTTGGTGCAGTTGTACTTGGTCTG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCTGTCATCCTGGAGAATaGTGCTGCTGCAGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCCHPGE*CCCRSD
Trigger: GTCAGACCTGCAGCAGCACCATTCTCCAGGATGACA...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTGATGAATTGTCATCCTaGAGAATGGTGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSDELSS*RMVLLQ
Trigger: CTGCAGCAGCACCATTCTCCAGGATGACAATTCATC...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 72 bp GGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTaGAGATCCTGCAGGTCGGCCTTCTTCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKARGEPLYPLC*RSCRSAFFLPS
Trigger: AGAAGGAAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGGGAGTGCGACTGCATTaGAAGGGACCTGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWGVRLH*KGPDRV
Trigger: CACCCTATCAGGTCCCTTTCAATGCAGTCGCACTCC...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCTGAAGAAAAAGACTTaGCCTTCATACAGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSLKKKT*PSYRPH
Trigger: ATGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTGGTAGAGCCAGGATTTaGACTCAGAGCTCTATAATC +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSGRARI*TQSSII
Trigger: GATTATAGAGCTCTGAGTTCAAATCCTGGCTCTACC...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGATGAGGAGAGGCCGGTaGCAACTCGAGGCGGATTCG +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVMRRGR*QLEADS
Trigger: CGAATCCGCCTCGAGTTGCCACCGGCCTCTCCTCAT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCCCTCTGACGTCATCCTaGATCTTGCAAAGACCAACC +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCPLTSS*ILQRPT
Trigger: GGTTGGTCTTTGCAAGATCCAGGATGACGTCAGAGG...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGTCACAGATTGGAGTCTaGGCAAGCAGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWSQIGV*ASRMGP
Trigger: TGGGCCCATCCTGCTTGCCCAGACTCCAATCTGTGA...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCCCATCATGTCTCTTGTaGTCAGGCTTGAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGPSCLL*SGLRQS
Trigger: GCTTTGTCTCAAGCCTGACCACAAGAGACATGATGG...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTCACAAAAATGTAGGATaGACCCGGATAGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSHKNVG*TRIAGY
Trigger: ATAACCAGCTATCCGGGTTCATCCTACATTTTTGTG...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGGGCAGAAGAATCACTTaGACCCGGGAGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKGRRIT*TREGRG
Trigger: GCCTCTCCCCTCCCGGGTTCAAGTGATTCTTCTGCC...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACACACGGGCCGCACCGGTaGGATGAGGAGAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTHGPHR*DEERPV
Trigger: CACCGGCCTCTCCTCATCCCACCGGTGCGGCCCGTG...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTTATTCAGGTTTAATCTaGGGAGTTGGACTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSYSGLI*GVGLSC
Trigger: GCAAGAGAGTCCAACTCCCCAGATTAAACCTGAATA...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAGAGGTTGCAGTGACCTaGGATCAGGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPEVAVT*DQATAL
Trigger: GAGTGCAGTGGCCTGATCTCAGGTCACTGCAACCTC...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGGGAGAATGGTGCTGCTaGAGGTCTGACCGGCACAAG +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKGEWCC*RSDRHK
Trigger: CTTGTGCCGGTCAGACCTGCAGCAGCACCATTCTCC...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCACATCCTGGAGAATGGTaGTGCTGCAGGTCTGACCGG +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPHPGEW*CCRSDR
Trigger: CCGGTCAGACCTGCAGCAGCACCATTCTCCAGGATG...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGCCAGGAGGCAGAGGTTaGAGTGACCTGAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKPGGRG*SDLRSG
Trigger: GCCTGATCTCAGGTCACTGCAACCTCTGCCTCCTGG...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAGGTGGCCGTGGAGCTTaGTTCCTCAAGGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPGGRGA*FLKGSL
Trigger: CAAAGAGCCCTTGAGGAAGCAAGCTCCACGGCCACC...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCGACTTTCCAACATCCTaGGATCCACAAACTAGAATG +
Preference number: 4 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGDFPTS*DPQTRM
Trigger: CATTCTAGTTTGTGGATCCCAGGATGTTGGAAAGTC...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGGGGGCGACATCAGAGTaGGTAATCCGGAGTGCGACT +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKGATSE*VIRSAT
Trigger: AGTCGCACTCCGGATTACCCACTCTGATGTCGCCCC...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGTCTGGGCAAGCAGGATaGGCCCATTCGTGTATCCTC +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVSGQAG*AHSCIL
Trigger: GAGGATACACGAATGGGCCCATCCTGCTTGCCCAGA...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGCCTTCGATCCCACGCTaGCACTTAAGGACACAATGT +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWPSIPR*HLRTQC
Trigger: ACATTGTGTCCTTAAGTGCCAGCGTGGGATCGAAGG...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTACAACTGCACCAAATaGATGGGCTGTAACCATCCA +
Preference number: 4 (lower is better)
Translates to: SSAHGSGKARGEPLYPLCYNCTK*MGCNHP
Trigger: TGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTA...GCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAGGAGAACGTGGAGAATaGCAGTCTGGTCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPGERGE*QSGHQP
Trigger: CGGCTGGTGACCAGACTGCCATTCTCCACGTTCTCC...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGATGGGTTATCTATGGTaGCCGTGGAGCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWMGYLW*PWSLLP
Trigger: AGGAAGCAAGCTCCACGGCCACCATAGATAACCCAT...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAAAAACTTTCAGGAATaGGTTATCTATGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSKNFQE*VIYGGR
Trigger: ACGGCCACCATAGATAACCCATTCCTGAAAGTTTTT...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGAAACCCAAAAACAAATaGCCTAGGCCGGGCGCGGTG +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKKPKNK*PRPGAV
Trigger: CACCGCGCCCGGCCTAGGTCATTTGTTTTTGGGTTT...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGTGGGTAATCCGGAGTaGGACTGCATTGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVVGNPE*DCIERD
Trigger: GTCCCTTTCAATGCAGTCGCACTCCGGATTACCCAC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAGTGACCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQVTSAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGGTCAC...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAATGGAGAATGGCAGTCTaGTCACCAGCCGCCGGCACC +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQWRMAV*SPAAGT
Trigger: GGTGCCGGCGGCTGGTGACCAGACTGCCATTCTCCA...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGCCGGATAGCTGGTTATaGAGTTTACAGTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWPDSWL*SLQWQF
Trigger: AAACTGCCACTGTAAACTTCATAACCAGCTATCCGG...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGATCCACAAACTAGAATaGCAGGGCAGCCATCTACTT +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWIHKLE*QGSHLL
Trigger: AAGTAGATGGCTGCCCTGTCATTCTAGTTTGTGGAT...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCAATTGTAATCCGTTGTaGCATAAGGTACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCNCNPL*HKVLSL
Trigger: AAGGGACAGTACCTTATGTCACAACGGATTACAATT...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGCTGCCAGAGGCAAGATaGGTAAGTAGCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVLPEAR*VSSCGF
Trigger: GAATCCACAGCTACTTACTCATCTTGCCTCTGGCAG...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCTTTTCAGTTCCTTCTTaGTTTTCTCAGGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCFSVPS*FSQAVS
Trigger: ACTCACAGCCTGAGAAAAGCAAGAAGGAACTGAAAA...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGCGTCATCCTGGATCTTaGAAAGACCAACCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKRHPGS*KDQPSW
Trigger: CCAGCTGGGTTGGTCTTTGCAAGATCCAGGATGACG...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAACTGAACCACGTGGCTaGGAGACAGCAATCGGATCA +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPTEPRG*ETAIGS
Trigger: TGATCCGATTGCTGTCTCCCAGCCACGTGGTTCAGT...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGCTTTTCTCAGGCTGTaGGTAGTGAAGTGCATGGAT +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVAFLRL*VVKCMD
Trigger: ATCCATGCACTTCACTACTCACAGCCTGAGAAAAGC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAATGTATCCATTATGCTTaGGATCCTGCAGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQCIHYA*DPAGRP
Trigger: AGGCCGACCTGCAGGATCTCAAGCATAATGGATACA...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAATGGTCTCAATCTCCTaGCCTCGTGAACCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQMVSIS*PREPPA
Trigger: GGCAGGCGGTTCACGAGGTCAGGAGATTGAGACCAT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAAAATGCAGAAATGATGTaGCCTGGTCCCATCACCCGT +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQNAEMM*PGPITR
Trigger: ACGGGTGATGGGACCAGGTCACATCATTTCTGCATT...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGCTTCTCCATGTCAATaGCTCTACAGATGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVASPCQ*LYRCQS
Trigger: GCTTTGGCATCTGTAGAGGCATTGACATGGAGAAGC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGACACAAACTGTTCTCTaGTGTTTTACTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWTQTVL*CFTPSG
Trigger: TCCAGAGGGAGTAAAACAGCAGAGAACAGTTTGTGT...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAACTGAGATCAGGCCACTaGACTCCAGCCTTGGCGACA +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQLRSGH*TPALAT
Trigger: TGTCGCCAAGGCTGGAGTGCAGTGGCCTGATCTCAG...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCATGGGCAGGCTGGCCTTaGCTGATGGTAAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPWAGWP*LMVKPN
Trigger: ATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCA...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAAATGTCTTGGGCAGGCTaGCCTTGGCTGATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQMSWAG*PWLMVK
Trigger: TTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACAT...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAACAAGCAGTCACAGATTaGAGTCTGGGCAAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQQAVTD*SLGKQD
Trigger: ATCCTGCTTGCCCAGACTCCAATCTGTGACTGCTTG...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGCTGTTTTACTCCCTCTaGACAGCAAGTATGAGTATC +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWLFYSL*TASMSI
Trigger: GATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAATGGAGTGCAGTGGCGTaGCCTCGGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQWSAVA*PRLTAS
Trigger: GCTTGCAGTGAGCCGAGGTCACGCCACTGCACTCCA...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACCCAGTACGGCCACCTaGCCCACAGCTGATAGCTCC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQPSTAT*PTADSS
Trigger: GGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGCAAAGCATCTGCAAATaGTGCGAGTCTGAAACGTCG +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKQSICK*CESETS
Trigger: CGACGTTTCAGACTCGCAGCATTTGCAGATGCTTTG...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGACAGCATATAGTATATaGGTAGGGGCGACATCAGAG +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVTAYSI*VGATSE
Trigger: CTCTGATGTCGCCCCTACCCATATACTATATGCTGT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAAACTGCACCAAATGGATaGGCTGTAACCATCCACACT +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQTAPNG*AVTIHT
Trigger: AGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGT...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCATCAGTGATTACTATGTaGTGGTGGGCTGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPSVITM*WWAGGS
Trigger: TGATCCTCCAGCCCACCACCACATAGTAATCACTGA...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 72 bp GGCACCATTCATGGCCATGAAACTCCATCATGTCTCTaGTGGTCAGGCTTGAGACAAAGCTTTCTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GTIHGHETPSCL*WSGLRQSFLVG
Trigger: TCCTACCAGAAAGCTTTGTCTCAAGCCTGACCACAAGAGACATGATGGAGTTTCATGGCCATGAATGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACAGAGTCCTCAGGTGAGTaGAAGGTGGTCCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTESSGE*KVVPEL
Trigger: CAGTTCTGGGACCACCTTTCACTCACCTGAGGACTC...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAATGGTCAGAGCGGAACTaGACCACGTGGCTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQWSERN*TTWLGD
Trigger: GTCTCCCAGCCACGTGGTTCAGTTCCGCTCTGACCA...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGTCTGGACAGCAAGTATaGGTATCACACAGAAGACTA +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVSGQQV*VSHRRL
Trigger: TAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGA...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGTTTACTGATAGGGACTaGAGAAAAAGACTTGACCTT +
Preference number: 4 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWFTDRD*RKRLDL
Trigger: AAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAA...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAGTGGTGCCAGCCTCCTaGGTTTACCATCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQVVPAS*VYHLIR
Trigger: TCTGATGAGATGGTAAACTCAGGAGGCTGGCACCAC...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGGCAACAATTTTAAGGTaGACCTGCCAGAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKATILR*TCQRQD
Trigger: ATCTTGCCTCTGGCAGGTTCACCTTAAAATTGTTGC...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAATGTCATCTACATACTaGGGGGTAAGGTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPMSSTY*GVRSGI
Trigger: TATGCCAGACCTTACCCCGCAGTATGTAGATGACAT...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACCCAGTCTCCAGCTCTaGCCTGTGGTTGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQPSLQL*PVVVSG
Trigger: GCCAGAGACAACCACAGGGCAGAGCTGGAGACTGGG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGAAAGACCAACCCAGCTaGCGTTTACAGCATATAGTA +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVKDQPS*RLQHIV
Trigger: TACTATATGCTGTAAACGCCAGCTGGGTTGGTCTTT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAAGCTTTCCCAAGAGCTaGTCTGCCAGTCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQSFPKS*SASPSS
Trigger: GGAAGAAGGACTGGCAGACCAGCTCTTGGGAAAGCT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAAAGAAATGATGTGACCTaGTCCCATCACCCGTTTACA +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQRNDVT*SHHPFT
Trigger: TGTAAACGGGTGATGGGACCAGGTCACATCATTTCT...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAGTGATTACTATGTGGTaGTGGGCTGGAGGATCATTT +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPVITMW*WAGGSF
Trigger: AAATGATCCTCCAGCCCACCACCACATAGTAATCAC...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGAACACAATGGAACACTaGGGAGAAAAATTCTGCATC +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVNTMEH*GEKFCI
Trigger: GATGCAGAATTTTTCTCCTCAGTGTTCCATTGTGTT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAAACAAGTGGGGGTTTATaGAAAACTTTCAGGAATGGG +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQTSGGL*KTFRNG
Trigger: CCCATTCCTGAAAGTTTTTCATAAACCCCCACTTGT...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAACCTCACAGTGTCAGTaGTTACTATGTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQTSQCQ*LLCGGG
Trigger: CCCACCACCACATAGTAATCACTGACACTGTGAGGT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAGTAGCACAGCCGTGGTaGCAGCCTCCTGAGTTTACC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQVAQPW*QPPEFT
Trigger: GGTAAACTCAGGAGGCTGGCACCACGGCTGTGCTAC...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAAATATACCATCTTCTGTaGAGTCCTCAGGTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQIYHLL*SPQVSE
Trigger: TTCACTCACCTGAGGACTCCACAGAAGATGGTATAT...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACTCAGGCAAGGCCCGTaGCGAGCCCTTGTATCCATT +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQLRQGP*RALVSI
Trigger: AATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACATATCTATGGTGGCCGTaGAGCTTGCTTCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTYLWWP*SLLPQG
Trigger: CCCTTGAGGAAGCAAGCTCCACGGCCACCATAGATA...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAGGAATGGGTTATCTATaGTGGCCGTGGAGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQGMGYL*WPWSLL
Trigger: AAGCAAGCTCCACGGCCACCATAGATAACCCATTCC...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCATCATCAAGGTTAAGATaGGATTTGAGCAAATTCCGG +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPSSRLR*DLSKFR
Trigger: CCGGAATTTGCTCAAATCTCATCTTAACCTTGATGA...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACACATTCGTGTATCCTCTaGCGTCATCCTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTHSCIL*RHPGSC
Trigger: GCAAGATCCAGGATGACGTCAGAGGATACACGAATG...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAGGGTCTAAGAGGTGCTaGGGGGCCACTGTAAAATAC +
Preference number: 4 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAGSKRC*GATVKY
Trigger: GTATTTTACAGTGGCCCCTCAGCACCTCTTAGACCC...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAAATCCGGAGTGCGACTaGATTGAAAGGGACCTGATA +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQNPECD*IERDLI
Trigger: TATCAGGTCCCTTTCAATGCAGTCGCACTCCGGATT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACACAATGCCTCTACAGATaGCAAAGCCCAAGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTQCLYR*QSPSSH
Trigger: GTGACTGCTTGGGCTTTGGCATCTGTAGAGGCATTG...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACATCCCAAGAGCTGGTCTaGCAGTCCTTCTTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTSQELV*QSFFLQ
Trigger: TTGAAGGAAGAAGGACTGGCAGACCAGCTCTTGGGA...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGTTTAATCTGGGGAGTTaGACTCTCTTGCACAAAAAT +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVFNLGS*TLLHKN
Trigger: ATTTTTGTGCAAGAGAGTCCAACTCCCCAGATTAAA...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAAAGGAGAAAGTGGTTTaGGCATCGGGGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQKEKVV*ASGAAA
Trigger: AGCTGCAGCCCCCGATGCCCAAACCACTTTCTCCTT...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAGTATCTATTAAATGTTaGCTTTCCAACATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPVSIKC*LSNILG
Trigger: TCCCAGGATGTTGGAAAGTCAACATTTAATAGATAC...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AAAGCTCTAAATGGCAGGGTTGTTCATAGGTGCAAGTTCAGGTCCAGCCTCCCAAAGGCAAACCTAGATTaGATGCAAATGCAATTACAG +
Preference number: 4 (lower is better)
Translates to: KALNGRVVHRCKFRSSLPKANLD*MQMQLQ
Trigger: CTGTAATTGCATTTGCATTCAATCTAGGTTTGCCTT...TGGGAGGCTGGACCTGAACTTGCACCTATGAACAACCCTGCCATTTAGAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACATTATGCTTGAGATCCTaGAGGTCGGCCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTLCLRS*RSAFFL
Trigger: AAGGAAGAAGGCCGACCTGCAGGATCTCAAGCATAA...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAAGGGTTGTTCATAGGTaGAAGTTCAGGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAARVVHR*KFRSSL
Trigger: GAGGCTGGACCTGAACTTGCACCTATGAACAACCCT...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGTCTATAATCAAAGCCTaGTGTCTTATCCATGATCTT +
Preference number: 4 (lower is better)
Translates to: EASYTLGVTDRFYMPETVSIIKA*CLIHDL
Trigger: AAGATCATGGATAAGACAGCAGGCTTTGATTATAGA...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAAGAAGCAGGAGCCCCTaGTCTGAAACCCATCCCATA +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQRSRSP*SETHPI
Trigger: TATGGGATGGGTTTCAGACCAGGGGCTCCTGCTTCT...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
3UTR CAA 72 bp CCTGTGGTTGTCTCTGGCCTCAGATCAGAAGTCAATTaGGACAAATCTACTTTTATAAGAGCCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVVVSGLRSEVN*DKSTFIRAPRR
Trigger: TCTTCTGGGGGCTCTTATAAAAGTAGATTTGTCCAAATTGACTTCTGATCTGAGGCCAGAGACAACCACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAGAGCCTTGCTGCAAATaGCCTCCAGTGAGTATAACT +
Preference number: 4 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAEPCCK*PPVSIT
Trigger: AGTTATACTCACTGGAGGTCATTTGCAGCAAGGCTC...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAATCCAAGTTACACCACTaGCAAGTGGTAGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQSKLHH*QVVEPG
Trigger: TCCTGGCTCTACCACTTGTCAGTGGTGTAACTTGGA...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAATTACTATGTGGTGGTaGGCTGGAGGATCATTTTCT +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQITMWW*AGGSFS
Trigger: AGAAAATGATCCTCCAGCCCACCACCACATAGTAAT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACTGCGGGGTAAGGTCTaGCATATATTTACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQLRGKV*HIFTVV
Trigger: GACCACAGTAAATATATGCCAGACCTTACCCCGCAG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAATTCTGTCAAAGCGGTaGTCACAATACCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQILSKR*SQYQFE
Trigger: TTCAAACTGGTATTGTGACCACCGCTTTGACAGAAT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACACTCTCTTGTAAGCGCTaGACACATATTTCACTATGT +
Preference number: 4 (lower is better)
Translates to: LFYSLWTASMSITQKTRTLSCKR*THISLC
Trigger: ACATAGTGAAATATGTGTTCAGCGCTTACAAGAGAG...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAACAAATGCTGCGAGTCTaGAACGTCGATTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQQMLRV*NVDFSS
Trigger: AGATGAGAAATCGACGTTTCAGACTCGCAGCATTTG...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR TCA 90 bp AATGCAAATGCAATTACAGGGCACCAGTTTCATTCTTCCAGAGCCTTGCTGCAAAGTTCATCTGTTAACTaGAAAGAGCTGAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: NANAITGHQFHSSRALLQSSSVN*KELNRN
Trigger: GTTTCTGTTCAGCTCTTTTCAGTTAACAGATGAACT...TTGCAGCAAGGCTCTGGAAGAATGAAACTGGTGCCCTGTAATTGCATTTGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAAGCATCTGCAAATGCTaGGAGTCTGAAACGTCGATT +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQSICKC*ESETSI
Trigger: AATCGACGTTTCAGACTCGCAGCATTTGCAGATGCT...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR GCA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAATGGTTTCTCTTTATGTaGCTCCTCAGGTTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQWFLFM*LLRFSC
Trigger: GCAAGAGAACCTGAGGAGGCACATAAAGAGAAACCA...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CCA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCAATACTCAAGCAAGAGTaGGTATACACAGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAILKQE*VYTEKM
Trigger: CATCTTCTCTGTGTATACCCACTCTTGCTTGAGTAT...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS GCA 90 bp ACCTGGCGGGCTCCCTCCCTCCAGTCCACGCCGGACGCCTGGGCTTaGAGTAACCGCCACCGTAGGCGCCGCCGACCGCACCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: TWRAPSLQSTPDAWA*SNRHRRRRRPHQRR
Trigger: CCTGCGCTGGTGCGGTCGGCGGCGCCTACGGTGGCGGTTACTGCAAGCCCAGGCGTCCGGCGTGGACTGGAGGGAGGGAGCCCGCCAGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377705.6
ENST00000464665.1
CDS-3UTR CAA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGCTCTGCCCTGTGGTaGTCTCTGGCCTCAGATCAG +
Preference number: 5 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSSSALW*SLASDQ
Trigger: CTGATCTGAGGCCAGAGACAACCACAGGGCAGAGCT...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCAGGCAAGAGAATCACTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCRQENH*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGTGATTCTCTTGCCT...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp AGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCCCAAGCAGTCACAGATaGGAGTCTGGGCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSAHGSGKARGEPLYPLCPSSHR*ESGQAG
Trigger: TCCTGCTTGCCCAGACTCCAATCTGTGACTGCTTGG...GCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCGCCCGTGGCGAGCCCTaGTATCCATTATGCTTGAGA +
Preference number: 5 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCARGEP*YPLCLR
Trigger: TCTCAAGCATAATGGATACAAGGGCTCGCCACGGGC...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 90 bp CGAGCAGACAATTCACGGTCCTTAGCTCTTCCGGGGGCACAGGGGTaGGGATGTGGTACAGCCGCTTCTCCATGTCAATGCCTCTACAGA +
Preference number: 5 (lower is better)
Translates to: RADNSRSLALPGAQG*GCGTAASPCQCLYR
Trigger: TCTGTAGAGGCATTGACATGGAGAAGCGGCTGTACCACATCCTCACCCCTGTGCCCCCGGAAGAGCTAAGGACCGTGAATTGTCTGCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGGACCTGACAGAGGCCTaGGCTCCCTGTCTCCGAACC +
Preference number: 5 (lower is better)
Translates to: EASYTLGVTDRFYMPETVDLTEA*APCLRT
Trigger: GGTTCGGAGACAGGGAGCCAAGGCCTCTGTCAGGTC...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGTGGTGGCCGTGGAGCTaGCTTCCTCAAGGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWWWPWS*LPQGLF
Trigger: AAAGAGCCCTTGAGGAAGCAAGCTCCACGGCCACCA...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp ATGCCTCTACAGATGCCAAAGCCCAAGCAGTCACAGATTGGAGTCTaGGCAAGCAGGATGGGCCCATTCGTGTATCCTCTGACGTCATCC +
Preference number: 5 (lower is better)
Translates to: MPLQMPKPKQSQIGV*ASRMGPFVYPLTSS
Trigger: GGATGACGTCAGAGGATACACGAATGGGCCCATCCTGCTTGCCCAGACTCCAATCTGTGACTGCTTGGGCTTTGGCATCTGTAGAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTGTCTTATCCATGATCTaGCCATCCAAACCCAAAAAC +
Preference number: 5 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSVLSMI*PSKPKN
Trigger: GTTTTTGGGTTTGGATGGCAAGATCATGGATAAGAC...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 90 bp AGATTGGAGTCTGGGCAAGCAGGATGGGCCCATTCGTGTATCCTCTaGCGTCATCCTGGATCTTGCAAAGACCAACCCAGCTGGCGTTTA +
Preference number: 5 (lower is better)
Translates to: RLESGQAGWAHSCIL*RHPGSCKDQPSWRL
Trigger: TAAACGCCAGCTGGGTTGGTCTTTGCAAGATCCAGGATGACGTCAGAGGATACACGAATGGGCCCATCCTGCTTGCCCAGACTCCAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp CATGTCAATGCCTCTACAGATGCCAAAGCCCAAGCAGTCACAGATTaGAGTCTGGGCAAGCAGGATGGGCCCATTCGTGTATCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: HVNASTDAKAQAVTD*SLGKQDGPIRVSSD
Trigger: GTCAGAGGATACACGAATGGGCCCATCCTGCTTGCCCAGACTCCAATCTGTGACTGCTTGGGCTTTGGCATCTGTAGAGGCATTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCTCTTCACAGGAAACATaGACTAACTCTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCSSQET*TNSSRA
Trigger: AGCCCTGGAAGAGTTAGTCAATGTTTCCTGTGAAGA...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGGCCAACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTTTTCTCATCTTGGTCTaGCTTTTTGTGTACAAGCCA +
Preference number: 5 (lower is better)
Translates to: GPTLAPVRPPDPQLIAPSFLILV*LFVYKP
Trigger: TGGCTTGTACACAAAAAGCAAGACCAAGATGAGAAA...AGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGTTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGTTGTATCCATTATGCTaGAGATCCTGCAGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWLYPLC*RSCRSA
Trigger: GGCCGACCTGCAGGATCTCAAGCATAATGGATACAA...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp AGCTCTGCACATGGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCACTGAAGAAAAAGACTaGACCTTCATACAGGCCGCA +
Preference number: 5 (lower is better)
Translates to: SSAHGSGKARGEPLYPLCTEEKD*TFIQAA
Trigger: TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGT...GCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCCATGTGCAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGCCTCCTCAGGTTCTCTaGCTCCAATTTTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWPPQVL*LQFSLM
Trigger: CATCAGAGAAAATTGGAGCAAGAGAACCTGAGGAGG...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp ACTCTAGCCCCAGTACGGCCACCTGACCCACAGCTGATAGCTCCCTCTAGAGGCGAGAAAGGCAAAACATaGATGGTGATGGATTGTCTT +
Preference number: 5 (lower is better)
Translates to: TLAPVRPPDPQLIAPSRGEKGKT*MVMDCL
Trigger: AAGACAATCCATCACCATCAATGTTTTGCCTTTCTC...GCCTCTAGAGGGAGCTATCAGCTGTGGGTCAGGTGGCCGTACTGGGGCTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCTTGACCACAGGAAGCTaGGTAGCAACAATTTTAAGG +
Preference number: 5 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCLTTGS*VATILR
Trigger: CCTTAAAATTGTTGCTACCAAGCTTCCTGTGGTCAA...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 90 bp TGCGGGGTAAGGTCTGGCATATATTTACTGTGGTCAGAGCGGAACTaGACCACGTGGCTGGGAGACAGCAATCGGATCAGATCAATGAGA +
Preference number: 5 (lower is better)
Translates to: CGVRSGIYLLWSERN*TTWLGDSNRIRSMR
Trigger: TCTCATTGATCTGATCCGATTGCTGTCTCCCAGCCACGTGGTTCAGTTCCGCTCTGACCACAGTAAATATATGCCAGACCTTACCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS CCA 90 bp ATCTTGCAAAGACCAACCCAGCTGGCGTTTACAGCATATAGTATATaGGTAGGGGCGACATCAGAGTGGGTAATCCGGAGTGCGACTGCA +
Preference number: 5 (lower is better)
Translates to: ILQRPTQLAFTAYSI*VGATSEWVIRSATA
Trigger: TGCAGTCGCACTCCGGATTACCCACTCTGATGTCGCCCCTACCCATATACTATATGCTGTAAACGCCAGCTGGGTTGGTCTTTGCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GAATTCTGTCAAAGCGGTGGTCACAATACCAGTTTGAACCTCAGCCCCAGGAAGACCCATCCCATAGTGTaGACGATGAGAGGGGACTCT +
Preference number: 5 (lower is better)
Translates to: EFCQSGGHNTSLNLSPRKTHPIV*TMRGDS
Trigger: AGAGTCCCCTCTCATCGTCAACACTATGGGATGGGT...CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACCACCGCTTTGACAGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp GCATGGATACTCAAGCAAGAGTGGGTATACACAGAGAAGATGTCTTaGGCAGGCTGGCCTTGGCTGATGGTAAAACCAAATACCTGCACC +
Preference number: 5 (lower is better)
Translates to: AWILKQEWVYTEKMS*AGWPWLMVKPNTCT
Trigger: GGTGCAGGTATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACATCTTCTCTGTGTATACCCACTCTTGCTTGAGTATCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp CACTTCCAACCTAGAGGACAGAGTCGGAAGCACCAGGGAGAACGTGGAGAATGGCGTCGATTTCTCATCTaGGTCTTGCTTTTTGTGTAC +
Preference number: 5 (lower is better)
Translates to: HFQPRGQSRKHQGERGEWRRFLI*VLLFVY
Trigger: GTACACAAAAAGCAAGACCAAGATGAGAAATCGACG...CCATTCTCCACGTTCTCCCTGGTGCTTCCGACTCTGTCCTCTAGGTTGGAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGACTCCATCATGTCTCTaGTGGTCAGGCTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: EASYTLGVTDRFYMPETVTPSCL*WSGLRQ
Trigger: TTGTCTCAAGCCTGACCACAAGAGACATGATGGAGT...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp GGCTCAGGCAAGGCCCGTGGCGAGCCCTTGTATCCATTATGCTTGAGATCCTGCAAAAAGGAAGGGCTCTaGGGTCCAAATTTATATCTA +
Preference number: 5 (lower is better)
Translates to: GSGKARGEPLYPLCLRSCKKEGL*GPNLYL
Trigger: TAGATATAAATTTGGACCCAAGAGCCCTTCCTTTTT...GCAGGATCTCAAGCATAATGGATACAAGGGCTCGCCACGGGCCTTGCCTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp TGTGTACAAGCCATCCATGTCATCTACATACTGCGGGGTAAGGTCTaGCATATATTTACTGTGGTCAGAGCGGAACTGAACCACGTGGCT +
Preference number: 5 (lower is better)
Translates to: CVQAIHVIYILRGKV*HIFTVVRAELNHVA
Trigger: AGCCACGTGGTTCAGTTCCGCTCTGACCACAGTAAATATATGCCAGACCTTACCCCGCAGTATGTAGATGACATGGATGGCTTGTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS-3UTR CAA 90 bp GAGGCTAGCTACACACTAGGAGTTACTGACCGTTTCTACATGCCGGAGACTGTGTCTTGGTCTTGCTTTTaGTGTACAAGCCATCCATGT +
Preference number: 5 (lower is better)
Translates to: EASYTLGVTDRFYMPETVSWSCF*CTSHPC
Trigger: ACATGGATGGCTTGTACACAAAAAGCAAGACCAAGA...CACAGTCTCCGGCATGTAGAAACGGTCAGTAACTCCTAGTGTGTAGCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 90 bp AACAGTTCAGAAAACAACTGGTTCGTCTTTGTGCATGCACAGCTGTaGCAGGGACCTGAAGATCTTAGAGGACTCAGGCCTTTAGAGGAA +
Preference number: 5 (lower is better)
Translates to: NSSENNWFVFVHAQL*QGPEDLRGLRPLEE
Trigger: TTCCTCTAAAGGCCTGAGTCCTCTAAGATCTTCAGGTCCCTGTCACAGCTGTGCATGCACAAAGACGAACCAGTTGTTTTCTGAACTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462798.1
CDS GCA 90 bp TCCACTGGGAACATAACAGTTCAGAAAACAACTGGTTCGTCTTTGTaGATGCACAGCTGTGACAGGGACCTGAAGATCTTAGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: STGNITVQKTTGSSL*MHSCDRDLKILEDS
Trigger: TGAGTCCTCTAAGATCTTCAGGTCCCTGTCACAGCTGTGCATGCACAAAGACGAACCAGTTGTTTTCTGAACTGTTATGTTCCCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462798.1
CDS CCA 90 bp AGTTGCTGGCAGCCAGAGGTAGGGGACACTTCTGGATATTTCCACTaGGAACATAACAGTTCAGAAAACAACTGGTTCGTCTTTGTGCAT +
Preference number: 5 (lower is better)
Translates to: SCWQPEVGDTSGYFH*EHNSSENNWFVFVH
Trigger: ATGCACAAAGACGAACCAGTTGTTTTCTGAACTGTTATGTTCCCAGTGGAAATATCCAGAAGTGTCCCCTACCTCTGGCTGCCAGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462798.1
CDS-3UTR CAA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACATTGGGCAGGCTGGCCTaGGCTGATGGTAAAACCAAA +
Preference number: 5 (lower is better)
Translates to: LFYSLWTASMSITQKTRTLGRLA*ADGKTK
Trigger: TTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAA...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACAGGTCACAATACCAGTTaGAACCTCAGCCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LFYSLWTASMSITQKTRTGHNTS*NLSPRK
Trigger: CTTCCTGGGGCTGAGGTTCAAACTGGTATTGTGACC...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS GCA 90 bp TTGGTCTTGCTTTTTGTGTACAAGCCATCCATGTCATCTACATACTaGGGGGTAAGGTCTGGCATATATTTACTGTGGTCAGAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: LVLLFVYKPSMSSTY*GVRSGIYLLWSERN
Trigger: GTTCCGCTCTGACCACAGTAAATATATGCCAGACCTTACCCCGCAGTATGTAGATGACATGGATGGCTTGTACACAAAAAGCAAGACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS CCA 90 bp CTGAATGGGAAACAAACATTGATCGCTAGAATTAGCCGTCTTCCTTaGACTCGAATTATGACTAATCTTCCTCTGGGGGTCTGGTGGACA +
Preference number: 5 (lower is better)
Translates to: LNGKQTLIARISRLP*TRIMTNLPLGVWWT
Trigger: TGTCCACCAGACCCCCAGAGGAAGATTAGTCATAATTCGAGTCCAAGGAAGACGGCTAATTCTAGCGATCAATGTTTGTTTCCCATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464383.1
CDS-3UTR CAA 90 bp ACCAAGTACAACTGCACCAAATGGATGGGCTGTAACCATCCACACTGGCTCCAACGAGGTTTTCCAGATTaGAAAGAAATTTCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TKYNCTKWMGCNHPHWLQRGFPD*KEISSA
Trigger: TGCTGAGGAAATTTCTTTCAAATCTGGAAAACCTCG...TTGGAGCCAGTGTGGATGGTTACAGCCCATCCATTTGGTGCAGTTGTACTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp ATAATCAAAGCCTGCTGTCTTATCCATGATCTTGCCATCCAAACCCAAAAACAAACGTCATCCTGGATCTaGCAAAGACCAACCCAGCTG +
Preference number: 5 (lower is better)
Translates to: IIKACCLIHDLAIQTQKQTSSWI*QRPTQL
Trigger: CAGCTGGGTTGGTCTTTGCAAGATCCAGGATGACGT...TTGTTTTTGGGTTTGGATGGCAAGATCATGGATAAGACAGCAGGCTTTGATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCACATTCTTCCAGAGCCTaGCTGCAAATGACCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAAHSSRA*LQMTSS
Trigger: ACTGGAGGTCATTTGCAGCAAGGCTCTGGAAGAATG...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp ACGCGAGCATCACTTCATTTTTCGACAGAACTTAGGTCTTCGGTATaGTTTCTCTTTATGTGCCTCCTCAGGTTCTCTTGCTCCAATTTT +
Preference number: 5 (lower is better)
Translates to: TRASLHFSTELRSSV*FLFMCLLRFSCSNF
Trigger: AAAATTGGAGCAAGAGAACCTGAGGAGGCACATAAAGAGAAACCATACCGAAGACCTAAGTTCTGTCGAAAAATGAAGTGATGCTCGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCACTCTTGTGGTCAGGCTaGAGACAAAGCTTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAALLWSG*RQSFLV
Trigger: TACCAGAAAGCTTTGTCTCAAGCCTGACCACAAGAG...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS-3UTR CAA 90 bp TTTTCTTTACTGATAGGGACTGAAGAAAAAGACTTGACCTTCATACAGGCCGCATTAAGTCCTTTGCTGTaGGGTCTAAGAGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: FSLLIGTEEKDLTFIQAALSPLL*GLRGAE
Trigger: CTCAGCACCTCTTAGACCCAACAGCAAAGGACTTAA...TGCGGCCTGTATGAAGGTCAAGTCTTTTTCTTCAGTCCCTATCAGTAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 90 bp GACTCTCTTGCACAAAAATGTAGGATGAACCCGGATAGCTGGTTATaGAGTTTACAGTGGCAGTTTTCAGATGTTCTAGCAACACAATGG +
Preference number: 5 (lower is better)
Translates to: DSLAQKCRMNPDSWL*SLQWQFSDVLATQW
Trigger: CCATTGTGTTGCTAGAACATCTGAAAACTGCCACTGTAAACTTCATAACCAGCTATCCGGGTTCATCCTACATTTTTGTGCAAGAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 90 bp CTACCTCTTGCACAAAAATGTAGGATGAACCCGGATAGCTGGTTATaGAGTTTACAGTGGCAGTTTTCAGATGTTCTAGCAACACAATGG +
Preference number: 5 (lower is better)
Translates to: LPLAQKCRMNPDSWL*SLQWQFSDVLATQW
Trigger: CCATTGTGTTGCTAGAACATCTGAAAACTGCCACTGTAAACTTCATAACCAGCTATCCGGGTTCATCCTACATTTTTGTGCAAGAGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460777.1
ENST00000464665.1
CDS CCA 90 bp ATAGTTGTTTTTACAAGAAGGTTTCCCATAATATACCATCTTCTGTaGAGTCCTCAGGTGAGTGAAAGGTGGTCCCAGAACTGGTTCTGT +
Preference number: 5 (lower is better)
Translates to: IVVFTRRFPIIYHLL*SPQVSERWSQNWFC
Trigger: ACAGAACCAGTTCTGGGACCACCTTTCACTCACCTGAGGACTCCACAGAAGATGGTATATTATGGGAAACCTTCTTGTAAAAACAACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377705.6
ENST00000464383.1
CDS TCA 90 bp TTTCTTCATCAGCAAATTCCAAAGCATCTGCAAATGCTGCGAGTCTaGAACGTCGATTTCTCATCTTGGTCTTGCTTTTTGTGTACAAGC +
Preference number: 5 (lower is better)
Translates to: FLHQQIPKHLQMLRV*NVDFSSWSCFLCTS
Trigger: GCTTGTACACAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGCAGATGCTTTGGAATTTGCTGATGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS GCA 90 bp TGGACTCTCTTTTTCTTCATCAGCAAATTCCAAAGCATCTGCAAATaGTGCGAGTCTGAAACGTCGATTTCTCATCTTGGTCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: WTLFFFISKFQSICK*CESETSISHLGLAF
Trigger: AAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGCAGATGCTTTGGAATTTGCTGATGAAGAAAAAGAGAGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS TCA 90 bp TTTCTCTTTATGTGCCTCCTCAGGTTCTCTTGCTCCAATTTTCTCTaGTGCTCCAGGAAGTTTAAAATTGTAATCCGTTGTGACATAAGG +
Preference number: 5 (lower is better)
Translates to: FLFMCLLRFSCSNFL*CSRKFKIVIRCDIR
Trigger: CCTTATGTCACAACGGATTACAATTTTAAACTTCCTGGAGCATCAGAGAAAATTGGAGCAAGAGAACCTGAGGAGGCACATAAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS GCA 90 bp ACTCTCTTTTTCTTCATCAGCAAATTCCAAAGCATCTGCAAATGCTaGGAGTCTGAAACGTCGATTTCTCATCTTGGTCTTGCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: TLFFFISKFQSICKC*ESETSISHLGLAFC
Trigger: ACAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGCAGATGCTTTGGAATTTGCTGATGAAGAAAAAGAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS-3UTR CAA 90 bp CTGTTTTACTCCCTCTGGACAGCAAGTATGAGTATCACACAGAAGACTAGAACAGAAGGCAAACCTAGATaGAATGCAAATGCAATTACA +
Preference number: 5 (lower is better)
Translates to: LFYSLWTASMSITQKTRTEGKPR*NANAIT
Trigger: TGTAATTGCATTTGCATTCAATCTAGGTTTGCCTTC...TGTTCTAGTCTTCTGTGTGATACTCATACTTGCTGTCCAGAGGGAGTAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp AAATGGTTAATCAGGTATCTATTAAATGTTGACTTTCCAACATCCTaGGATCCACAAACTAGAATGACAGGGCAGCCATCTACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: KWLIRYLLNVDFPTS*DPQTRMTGQPSTSS
Trigger: TGAAGAAGTAGATGGCTGCCCTGTCATTCTAGTTTGTGGATCCCAGGATGTTGGAAAGTCAACATTTAATAGATACCTGATTAACCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 90 bp AAATGGTTAATCAGGTATCTATTAAATGTTGACTTTCCAACATCCTaGGATCCACAAACTAGAATGACAGGGCAGCCATCTACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: KWLIRYLLNVDFPTS*DPQTRMTGQPSTSS
Trigger: AGAAGAAGTAGATGGCTGCCCTGTCATTCTAGTTTGTGGATCCCAGGATGTTGGAAAGTCAACATTTAATAGATACCTGATTAACCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464383.1
CDS CCA 90 bp AAAGTCTGTATAAACACCTATCAGTTTATGTCCAGTGAACTCAACTaGACTCTCTTTTTCTTCATCAGCAAATTCCAAAGCATCTGCAAA +
Preference number: 5 (lower is better)
Translates to: KVCINTYQFMSSELN*TLFFFISKFQSICK
Trigger: TTTGCAGATGCTTTGGAATTTGCTGATGAAGAAAAAGAGAGTCCAGTTGAGTTCACTGGACATAAACTGATAGGTGTTTATACAGACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS CAA 90 bp TCGGAGGCCGGGGTCGGGCTAGGGATCGGGCTGGGGGTCGCGGTGTaGGGTCTCCGGGCCGCCGCCGCGCGCGACACCTGGCGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SEAGVGLGIGLGVAV*GLRAAAARDTWRAP
Trigger: GGGAGCCCGCCAGGTGTCGCGCGCGGCGGCGGCCCGGAGACCCAACACCGCGACCCCCAGCCCGATCCCTAGCCCGACCCCGGCCTCCGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377705.6
ENST00000464665.1
CDS GCA 72 bp GCTCCCTCCCTCCAGTCCACGCCGGACGCCTGGGCTTaGAGTAACCGCCACCGTAGGCGCCGCCGACCGCAC +
Preference number: 6 (lower is better)
Translates to: APSLQSTPDAWA*SNRHRRRRRPH
Trigger: GTGCGGTCGGCGGCGCCTACGGTGGCGGTTACTGCAAGCCCAGGCGTCCGGCGTGGACTGGAGGGAGGGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377705.6
ENST00000464665.1
CDS CCA 72 bp TGGCGGGCTCCCTCCCTCCAGTCCACGCCGGACGCCTaGGCTTGCAGTAACCGCCACCGTAGGCGCCGCCGA +
Preference number: 6 (lower is better)
Translates to: WRAPSLQSTPDA*ACSNRHRRRRR
Trigger: TCGGCGGCGCCTACGGTGGCGGTTACTGCAAGCCCAGGCGTCCGGCGTGGACTGGAGGGAGGGAGCCCGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377705.6
ENST00000464665.1
CDS TCA 72 bp CCACGTGGCTGGGAGACAGCAATCGGATCAGATCAATaGGAAGCAGGAGCCCCTGGTCTGAAACCCATCCCA +
Preference number: 6 (lower is better)
Translates to: PRGWETAIGSDQ*EAGAPGLKPIP
Trigger: TGGGATGGGTTTCAGACCAGGGGCTCCTGCTTCTCATTGATCTGATCCGATTGCTGTCTCCCAGCCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS TCA 72 bp TCTGGGCAAGCAGGATGGGCCCATTCGTGTATCCTCTaGCGTCATCCTGGATCTTGCAAAGACCAACCCAGC +
Preference number: 6 (lower is better)
Translates to: SGQAGWAHSCIL*RHPGSCKDQPS
Trigger: GCTGGGTTGGTCTTTGCAAGATCCAGGATGACGTCAGAGGATACACGAATGGGCCCATCCTGCTTGCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS GCA 72 bp AGGGGCGACATCAGAGTGGGTAATCCGGAGTGCGACTaGATTGAAAGGGACCTGATAGGGTGTCAGGCTATG +
Preference number: 6 (lower is better)
Translates to: RGDIRVGNPECD*IERDLIGCQAM
Trigger: CATAGCCTGACACCCTATCAGGTCCCTTTCAATGCAGTCGCACTCCGGATTACCCACTCTGATGTCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS GCA 72 bp ATGGGTAGGGGCGACATCAGAGTGGGTAATCCGGAGTaGGACTGCATTGAAAGGGACCTGATAGGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: MGRGDIRVGNPE*DCIERDLIGCQ
Trigger: CTGACACCCTATCAGGTCCCTTTCAATGCAGTCGCACTCCGGATTACCCACTCTGATGTCGCCCCTACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 72 bp CAGATGCCAAAGCCCAAGCAGTCACAGATTGGAGTCTaGGCAAGCAGGATGGGCCCATTCGTGTATCCTCTG +
Preference number: 6 (lower is better)
Translates to: QMPKPKQSQIGV*ASRMGPFVYPL
Trigger: CAGAGGATACACGAATGGGCCCATCCTGCTTGCCCAGACTCCAATCTGTGACTGCTTGGGCTTTGGCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 72 bp AGGATGGGCCCATTCGTGTATCCTCTGACGTCATCCTaGATCTTGCAAAGACCAACCCAGCTGGCGTTTACA +
Preference number: 6 (lower is better)
Translates to: RMGPFVYPLTSS*ILQRPTQLAFT
Trigger: TGTAAACGCCAGCTGGGTTGGTCTTTGCAAGATCCAGGATGACGTCAGAGGATACACGAATGGGCCCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CAA 72 bp GGTATACACAGAGAAGATGTCTTGGGCAGGCTGGCCTaGGCTGATGGTAAAACCAAATACCTGCACCTGGCC +
Preference number: 6 (lower is better)
Translates to: GIHREDVLGRLA*ADGKTKYLHLA
Trigger: GGCCAGGTGCAGGTATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACATCTTCTCTGTGTATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CAA 90 bp GCAAGAGTGGGTATACACAGAGAAGATGTCTTGGGCAGGCTGGCCTaGGCTGATGGTAAAACCAAATACCTGCACCTGGCCATAGAGGCA +
Preference number: 6 (lower is better)
Translates to: ARVGIHREDVLGRLA*ADGKTKYLHLAIEA
Trigger: TGCCTCTATGGCCAGGTGCAGGTATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACATCTTCTCTGTGTATACCCACTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 72 bp GTATACACAGAGAAGATGTCTTGGGCAGGCTGGCCTTaGCTGATGGTAAAACCAAATACCTGCACCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VYTEKMSWAGWP*LMVKPNTCTWP
Trigger: TGGCCAGGTGCAGGTATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACATCTTCTCTGTGTATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 72 bp GAGTGGGTATACACAGAGAAGATGTCTTGGGCAGGCTaGCCTTGGCTGATGGTAAAACCAAATACCTGCACC +
Preference number: 6 (lower is better)
Translates to: EWVYTEKMSWAG*PWLMVKPNTCT
Trigger: GGTGCAGGTATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACATCTTCTCTGTGTATACCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 72 bp ACAGCATATAGTATATGGGTAGGGGCGACATCAGAGTaGGTAATCCGGAGTGCGACTGCATTGAAAGGGACC +
Preference number: 6 (lower is better)
Translates to: TAYSIWVGATSE*VIRSATALKGT
Trigger: GGTCCCTTTCAATGCAGTCGCACTCCGGATTACCCACTCTGATGTCGCCCCTACCCATATACTATATGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CCA 72 bp AGACCAACCCAGCTGGCGTTTACAGCATATAGTATATaGGTAGGGGCGACATCAGAGTGGGTAATCCGGAGT +
Preference number: 6 (lower is better)
Translates to: RPTQLAFTAYSI*VGATSEWVIRS
Trigger: ACTCCGGATTACCCACTCTGATGTCGCCCCTACCCATATACTATATGCTGTAAACGCCAGCTGGGTTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CAA 72 bp GGCCCATTCGTGTATCCTCTGACGTCATCCTGGATCTaGCAAAGACCAACCCAGCTGGCGTTTACAGCATAT +
Preference number: 6 (lower is better)
Translates to: GPFVYPLTSSWI*QRPTQLAFTAY
Trigger: ATATGCTGTAAACGCCAGCTGGGTTGGTCTTTGCAAGATCCAGGATGACGTCAGAGGATACACGAATGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CAA 90 bp AGCAGGATGGGCCCATTCGTGTATCCTCTGACGTCATCCTGGATCTaGCAAAGACCAACCCAGCTGGCGTTTACAGCATATAGTATATGG +
Preference number: 6 (lower is better)
Translates to: SRMGPFVYPLTSSWI*QRPTQLAFTAYSIW
Trigger: CCATATACTATATGCTGTAAACGCCAGCTGGGTTGGTCTTTGCAAGATCCAGGATGACGTCAGAGGATACACGAATGGGCCCATCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CAA 90 bp TGCATGGATACTCAAGCAAGAGTGGGTATACACAGAGAAGATGTCTaGGGCAGGCTGGCCTTGGCTGATGGTAAAACCAAATACCTGCAC +
Preference number: 6 (lower is better)
Translates to: CMDTQARVGIHREDV*GRLALADGKTKYLH
Trigger: GTGCAGGTATTTGGTTTTACCATCAGCCAAGGCCAGCCTGCCCAAGACATCTTCTCTGTGTATACCCACTCTTGCTTGAGTATCCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 72 bp TCGCTAGAATTAGCCGTCTTCCTTGGACTCGAATTATaGCTAATCTTCCTCTGGGGGTCTGGTGGACAGACA +
Preference number: 6 (lower is better)
Translates to: SLELAVFLGLEL*LIFLWGSGGQT
Trigger: TGTCTGTCCACCAGACCCCCAGAGGAAGATTAGTCATAATTCGAGTCCAAGGAAGACGGCTAATTCTAGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464383.1
CDS CCA 72 bp GCCATCCATGTCATCTACATACTGCGGGGTAAGGTCTaGCATATATTTACTGTGGTCAGAGCGGAACTGAAC +
Preference number: 6 (lower is better)
Translates to: AIHVIYILRGKV*HIFTVVRAELN
Trigger: GTTCAGTTCCGCTCTGACCACAGTAAATATATGCCAGACCTTACCCCGCAGTATGTAGATGACATGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS TCA 72 bp CTGGGGAGTTGGACTCTCTTGCACAAAAATGTAGGATaGACCCGGATAGCTGGTTATGAAGTTTACAGTGGC +
Preference number: 6 (lower is better)
Translates to: LGSWTLLHKNVG*TRIAGYEVYSG
Trigger: GCCACTGTAAACTTCATAACCAGCTATCCGGGTTCATCCTACATTTTTGTGCAAGAGAGTCCAACTCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS CAA 90 bp TCTGCAAATGCTGCGAGTCTGAAACGTCGATTTCTCATCTTGGTCTaGCTTTTTGTGTACAAGCCATCCATGTCATCTACATACTGCGGG +
Preference number: 6 (lower is better)
Translates to: SANAASLKRRFLILV*LFVYKPSMSSTYCG
Trigger: CCCGCAGTATGTAGATGACATGGATGGCTTGTACACAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS CAA 72 bp GGCAGCCATCTACTTCTTCTGAATGGGAAACAAACATaGATCGCTAGAATTAGCCGTCTTCCTTGGACTCGA +
Preference number: 6 (lower is better)
Translates to: GSHLLLLNGKQT*IARISRLPWTR
Trigger: TCGAGTCCAAGGAAGACGGCTAATTCTAGCGATCAATGTTTGTTTCCCATTCAGAAGAAGTAGATGGCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464383.1
CDS TCA 72 bp TTGACTTTCCAACATCCTGGGATCCACAAACTAGAATaGCAGGGCAGCCATCTACTTCTTCACAGGAAACAT +
Preference number: 6 (lower is better)
Translates to: LTFQHPGIHKLE*QGSHLLLHRKH
Trigger: ATGTTTCCTGTGAAGAAGTAGATGGCTGCCCTGTCATTCTAGTTTGTGGATCCCAGGATGTTGGAAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377705.6
CDS TCA 72 bp GAAAACGGGTTCTACCTCTTGCACAAAAATGTAGGATaGACCCGGATAGCTGGTTATGAAGTTTACAGTGGC +
Preference number: 6 (lower is better)
Translates to: ENGFYLLHKNVG*TRIAGYEVYSG
Trigger: GCCACTGTAAACTTCATAACCAGCTATCCGGGTTCATCCTACATTTTTGTGCAAGAGGTAGAACCCGTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460777.1
ENST00000464665.1
CDS TCA 72 bp TTGACTTTCCAACATCCTGGGATCCACAAACTAGAATaGCAGGGCAGCCATCTACTTCTTCTGAATGGGAAA +
Preference number: 6 (lower is better)
Translates to: LTFQHPGIHKLE*QGSHLLLLNGK
Trigger: TTTCCCATTCAGAAGAAGTAGATGGCTGCCCTGTCATTCTAGTTTGTGGATCCCAGGATGTTGGAAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464383.1
CDS CCA 72 bp TTTACAAGAAGGTTTCCCATAATATACCATCTTCTGTaGAGTCCTCAGGTGAGTGAAAGGTGGTCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: FTRRFPIIYHLL*SPQVSERWSQN
Trigger: GTTCTGGGACCACCTTTCACTCACCTGAGGACTCCACAGAAGATGGTATATTATGGGAAACCTTCTTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377705.6
ENST00000464383.1
CDS CAA 72 bp GCTGCGAGTCTGAAACGTCGATTTCTCATCTTGGTCTaGCTTTTTGTGTACAAGCCATCCATGTCATCTACA +
Preference number: 6 (lower is better)
Translates to: AASLKRRFLILV*LFVYKPSMSST
Trigger: TGTAGATGACATGGATGGCTTGTACACAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS CAA 72 bp GCAAATGCTGCGAGTCTGAAACGTCGATTTCTCATCTaGGTCTTGCTTTTTGTGTACAAGCCATCCATGTCA +
Preference number: 6 (lower is better)
Translates to: ANAASLKRRFLI*VLLFVYKPSMS
Trigger: TGACATGGATGGCTTGTACACAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS TCA 72 bp CAGCAAATTCCAAAGCATCTGCAAATGCTGCGAGTCTaGAACGTCGATTTCTCATCTTGGTCTTGCTTTTTG +
Preference number: 6 (lower is better)
Translates to: QQIPKHLQMLRV*NVDFSSWSCFL
Trigger: CAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGCAGATGCTTTGGAATTTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS GCA 72 bp CTTTTTGTGTACAAGCCATCCATGTCATCTACATACTaGGGGGTAAGGTCTGGCATATATTTACTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: LFVYKPSMSSTY*GVRSGIYLLWS
Trigger: TGACCACAGTAAATATATGCCAGACCTTACCCCGCAGTATGTAGATGACATGGATGGCTTGTACACAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS GCA 72 bp AACATAACAGTTCAGAAAACAACTGGTTCGTCTTTGTaGATGCACAGCTGTGACAGGGACCTGAAGATCTTA +
Preference number: 6 (lower is better)
Translates to: NITVQKTTGSSL*MHSCDRDLKIL
Trigger: TAAGATCTTCAGGTCCCTGTCACAGCTGTGCATGCACAAAGACGAACCAGTTGTTTTCTGAACTGTTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462798.1
CDS CAA 90 bp AAAGCATCTGCAAATGCTGCGAGTCTGAAACGTCGATTTCTCATCTaGGTCTTGCTTTTTGTGTACAAGCCATCCATGTCATCTACATAC +
Preference number: 6 (lower is better)
Translates to: KASANAASLKRRFLI*VLLFVYKPSMSSTY
Trigger: GTATGTAGATGACATGGATGGCTTGTACACAAAAAGCAAGACCAAGATGAGAAATCGACGTTTCAGACTCGCAGCATTTGCAGATGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1
CDS TCA 72 bp AATGGTGGCTCAGGTATGAAACTAAGGAGGGGAGGATaGACATTTTTCACGATACACCTTTCTATAATAGTT +
Preference number: 6 (lower is better)
Translates to: NGGSGMKLRRGG*TFFTIHLSIIV
Trigger: AACTATTATAGAAAGGTGTATCGTGAAAAATGTTCATCCTCCCCTCCTTAGTTTCATACCTGAGCCACCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460777.1
CDS CCA 72 bp ATAAACACCTATCAGTTTATGTCCAGTGAACTCAACTaGACTCTCTTTTTCTTCATCAGCAAATTCCAAAGC +
Preference number: 6 (lower is better)
Translates to: INTYQFMSSELN*TLFFFISKFQS
Trigger: GCTTTGGAATTTGCTGATGAAGAAAAAGAGAGTCCAGTTGAGTTCACTGGACATAAACTGATAGGTGTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377705.6
ENST00000462798.1
ENST00000464383.1