RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOL6 (Homo sapiens)

Ensembl gene IDs: ENSG00000165271

Ensembl transcript IDs: ENST00000297990.9, ENST00000353159.6, ENST00000379470.5, ENST00000379471.3, ENST00000464829.5, ENST00000496319.2

Found 797 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATaGCCCTGCCCCAATGCTGGAGCATCAGAGAGAAAGTTGGGGCTG +
Preference number: 1 (lower is better)
Translates to: SSSGMVRPRRLHGPP*PCPNAGASERKLGL
Trigger: CAGCCCCAACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR GCA 90 bp TCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCTaGCCCAATGCTGGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTT +
Preference number: 1 (lower is better)
Translates to: SGMVRPRRLHGPPCP*PNAGASERKLGLGF
Trigger: AAAACCCAGCCCCAACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 90 bp AAGGAGTGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTaGATGGATCTCCTGGGTTCAGTTCCTTCTCTGAGCTGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: KEWEIAGRSRPRANR*MDLLGSVPSLSWLP
Trigger: TGGGAGCCAGCTCAGAGAAGGAACTGAACCCAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCACTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR TCA 90 bp TTACAGGAAGCAGAGAGGCTACCAGAAAGTGGGTGTAGACCAGACTaGAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGG +
Preference number: 1 (lower is better)
Translates to: LQEAERLPESGCRPD*KEAAFSSLGPGSSW
Trigger: CCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACCCACTTTCTGGTAGCCTCTCTGCTTCCTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR TCA 90 bp GTGACTCAGAAGGGCCACATTTTCGCTGGGTCCCATCTAAAGGCCTaGCACTGCAGTGAAGGGCATGCTAAGTCTAGGCACAGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: VTQKGHIFAGSHLKA*HCSEGHAKSRHRSW
Trigger: CCAGGACCTGTGCCTAGACTTAGCATGCCCTTCACTGCAGTGTCAGGCCTTTAGATGGGACCCAGCGAAAATGTGGCCCTTCTGAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 90 bp GCTAATAGGTGGATGGATCTCCTGGGTTCAGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACA +
Preference number: 1 (lower is better)
Translates to: ANRWMDLLGSVPSLS*LPLLFWDGEAQETT
Trigger: TGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAACTGAACCCAGGAGATCCATCCACCTATTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR GCA 90 bp GAGGATTCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCTCC +
Preference number: 1 (lower is better)
Translates to: EDSCPRRVEVILLTS*SRGPMSCCPSTACS
Trigger: GGAGCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGAATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR TCA 90 bp TGCTGGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATaGTTCAGCATGTTCAGCCAGCAGGCCCTCCATGGAGGATTCATG +
Preference number: 1 (lower is better)
Translates to: CWSIREKVGAGFCWR*FSMFSQQALHGGFM
Trigger: CATGAATCCTCCATGGAGGGCCTGCTGGCTGAACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTAT +
Preference number: 1 (lower is better)
Translates to: PFLSSVLFHCLHPGK*HQHRRALCSFNVVY
Trigger: ATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR CCA 90 bp ACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTaGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGT +
Preference number: 1 (lower is better)
Translates to: TQSFPVLGSFPLSPP*EVASTQEGIVLLQC
Trigger: ACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR GCA 90 bp CACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTaGTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCA +
Preference number: 1 (lower is better)
Translates to: HCLHPGKWHQHRRAL*SFNVVYSYTYSPFP
Trigger: TGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR CCA 90 bp CTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTaGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCG +
Preference number: 1 (lower is better)
Translates to: LGSGINTGGHCAPSM*SIHTHIAPFHCSVS
Trigger: CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: GVDQTERRQHSPPWALGAVPSLS*LPLLFW
Trigger: CCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAAC...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR GCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGAGAGGTCCAATGTCCTaGTGTCCGTCTACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLRGPMS*CPSTAC
Trigger: GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCT...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSPAGPP*RIHVQG
Trigger: TCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CAA 90 bp CCTGCCCCAATGCTGGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTaGTTGGAGATGATTCAGCATGTTCAGCCAGCAGGCCCTCCATGG +
Preference number: 2 (lower is better)
Translates to: PAPMLEHQRESWGWV*LEMIQHVQPAGPPW
Trigger: CCATGGAGGGCCTGCTGGCTGAACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCCAGCATTGGGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR TCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTTGGAGGTCATCCTACTaGCATCTTGCTCTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: GVDQTERRQHSPPWALGAWRSSY*HLALEV
Trigger: GACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCA...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCATCAGAGAGAAAGTTaGGGCTGGGTTTTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: RLKGGSILLLGPWELLGSHQRES*GWVLLE
Trigger: CTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR TCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCTGGAGGTCATCCTACTaGCATCTTGCTCTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSWRSSY*HLALEV
Trigger: GACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCA...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR TCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAAACTGCTCAGTGTCGGTaGTGTGACTCAGAAGGGCCA +
Preference number: 2 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQTAQCR*CDSEGP
Trigger: TGGCCCTTCTGAGTCACATCACCGACACTGAGCAGT...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAGCCCAGGAGACTACATaGGCCACCATGCCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTAQETT*ATMPLP
Trigger: GGGCAGGGGCATGGTGGCCCATGTAGTCTCCTGGGC...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR GCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGAGGTCCAATGTCCTaGTGTCCGTCTACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHRGPMS*CPSTAC
Trigger: GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR GCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTAGAGGTCCAATGTCCTaGTGTCCGTCTACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIRGPMS*CPSTAC
Trigger: GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCT...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCTACATGGGCCACCATaGCCCTGCCCCAATGCTGGA +
Preference number: 2 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLHGPP*PCPNAG
Trigger: TCCAGCATTGGGGCAGGGGCATGGTGGCCCATGTAG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCTCCCACTCCTCTTCTaGGATGGTGAGGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLPLLF*DGEAQE
Trigger: CTCCTGGGCCTCACCATCCCAGAAGAGGAGTGGGAG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR TCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCATGGAGGTCATCCTACTaGCATCTTGCTCTAGAGGTC +
Preference number: 2 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPWRSSY*HLALEV
Trigger: GACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCA...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTAGACTAAGAAAGGAGTaGGAAATCGCAGGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIRLRKE*EIAGRS
Trigger: GGACCTCCCTGCGATTTCCCACTCCTTTCTTAGTCT...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTACTCCTCCTTGGGCCCTaGGAGCTCCTGGGGAGTAAG +
Preference number: 2 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVLLLGP*ELLGSK
Trigger: CTTACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAG...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR GCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCC +
Preference number: 2 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINILLTS*SRGPMS
Trigger: GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGAT...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTACCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALPAGPP*RIHVQG
Trigger: TCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGG...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPPAGPP*RIHVQG
Trigger: TCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTGGGCCACATTTTCGCTaGGTCCCATCTAAAGGCCTG +
Preference number: 2 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPGPHFR*VPSKGL
Trigger: CAGGCCTTTAGATGGGACCCAGCGAAAATGTGGCCC...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CAA 90 bp TTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATaGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTT +
Preference number: 2 (lower is better)
Translates to: FHCLHPGKWHQHRRA*CSFNVVYSYTYSPF
Trigger: AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCCCCTGCCCCAATGCTaGAGCATCAGAGAGAAAGTT +
Preference number: 2 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSPLPQC*SIREKV
Trigger: AACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCCCCTTCTCTGTTTCTaGAAGAAGACTAAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHPLLCF*KKTKKG
Trigger: TCCTTTCTTAGTCTTCTTCCAGAAACAGAGAAGGGG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTACTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVLHPGK*HQHRRA
Trigger: TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAG...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR TCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTATCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTT +
Preference number: 2 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALSVSVM*LRRATF
Trigger: AAATGTGGCCCTTCTGAGTCACATCACCGACACTGA...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGG +
Preference number: 2 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVVPSLS*LPLLFW
Trigger: CCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAAC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR TCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGGGTTTTGTTGGAGATaGTTCAGCATGTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSGFCWR*FSMFSQ
Trigger: CTGGCTGAACATGCTGAATCATCTCCAACAAAACCC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAAGTAGTGGCAGTTTGTaGCATGAACGGGCAAACAGC +
Preference number: 2 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVSSGSL*HERANS
Trigger: GCTGTTTGCCCGTTCATGTCACAAACTGCCACTACT...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCC +
Preference number: 2 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSILLTS*SRGPMS
Trigger: GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGAT...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR GCA 72 bp GTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCTaGCCCAATGCTGGAGCATCAGAGAGAAAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: VRPRRLHGPPCP*PNAGASERKLG
Trigger: CCCCAACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 72 bp GAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTaGGGAGTAAGACTTGAGTCTCCCCCATCTCTGCAA +
Preference number: 3 (lower is better)
Translates to: EAAFSSLGPGSS*GVRLESPPSLQ
Trigger: TTGCAGAGATGGGGGAGACTCAAGTCTTACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR TCA 72 bp GCAGAGAGGCTACCAGAAAGTGGGTGTAGACCAGACTaGAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: AERLPESGCRPD*KEAAFSSLGPG
Trigger: CCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACCCACTTTCTGGTAGCCTCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR CCA 72 bp TGGATGGATCTCCTGGGTTCAGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGGGATGGTGAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: WMDLLGSVPSLS*LPLLFWDGEAQ
Trigger: CTGGGCCTCACCATCCCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAACTGAACCCAGGAGATCCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CAA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGCATCAGAGAGAAAGTaGGGGCTGGGTTTTGTTGGA +
Preference number: 3 (lower is better)
Translates to: RLKGGSILLLGPWELLGSASERK*GLGFVG
Trigger: TCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 72 bp GAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTaGATGGATCTCCTGGGTTCAGTTCCTTCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: EIAGRSRPRANR*MDLLGSVPSLS
Trigger: GCTCAGAGAAGGAACTGAACCCAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 72 bp GAGATGATTCAGCATGTTCAGCCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGAGGGTGGAGGTCATCC +
Preference number: 3 (lower is better)
Translates to: EMIQHVQPAGPP*RIHVQGGWRSS
Trigger: GGATGACCTCCACCCTCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGGCTGAACATGCTGAATCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CAA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTTGGGGCTGGGTTTTGTaGGAGATGATTCAGCATGTT +
Preference number: 3 (lower is better)
Translates to: GVDQTERRQHSPPWALGAWGWVL*EMIQHV
Trigger: AACATGCTGAATCATCTCCAACAAAACCCAGCCCCA...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR TCA 72 bp AAGGGCCACATTTTCGCTGGGTCCCATCTAAAGGCCTaGCACTGCAGTGAAGGGCATGCTAAGTCTAGGCAC +
Preference number: 3 (lower is better)
Translates to: KGHIFAGSHLKA*HCSEGHAKSRH
Trigger: GTGCCTAGACTTAGCATGCCCTTCACTGCAGTGTCAGGCCTTTAGATGGGACCCAGCGAAAATGTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR TCA 72 bp CATATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTTTCGCTGGGTCCCATC +
Preference number: 3 (lower is better)
Translates to: HIAPFHCSVSVM*LRRATFSLGPI
Trigger: GATGGGACCCAGCGAAAATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 72 bp TTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTaGGAAGTGGCATCAACACAGGAGGGCATTGTGCTC +
Preference number: 3 (lower is better)
Translates to: FPVLGSFPLSPP*EVASTQEGIVL
Trigger: GAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR GCA 72 bp TGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACA +
Preference number: 3 (lower is better)
Translates to: CPRRVEVILLTS*SRGPMSCCPST
Trigger: TGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR CCA 72 bp TCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCATTGTGCTCCTTCAAT +
Preference number: 3 (lower is better)
Translates to: SSVLFHCLHPGK*HQHRRALCSFN
Trigger: ATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR CAA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGCAGCATTCTCCTCCTaGGGCCCTGGGAGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVAAFSS*GPGSSW
Trigger: CCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR CAA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTGCATCAGAGAGAAAGTaGGGGCTGGGTTTTGTTGGA +
Preference number: 3 (lower is better)
Translates to: IVVAVCDMNGQTARADAAASERK*GLGFVG
Trigger: TCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGC...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR GCA 72 bp GTAAGACTTGAGTCTCCCCCATCTCTGCAACCCCACTaGAGGTACATAGTAGTGGCAGTTTGTGACATGAAC +
Preference number: 3 (lower is better)
Translates to: VRLESPPSLQPH*RYIVVAVCDMN
Trigger: GTTCATGTCACAAACTGCCACTACTATGTACCTGCAGTGGGGTTGCAGAGATGGGGGAGACTCAAGTCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR GCA 72 bp CACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTaGTCCTTCAATGTGGTCTATTCATACACATATAGC +
Preference number: 3 (lower is better)
Translates to: HPGKWHQHRRAL*SFNVVYSYTYS
Trigger: GCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR CCA 72 bp GGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTaGTCTATTCATACACATATAGCCCCTTTCCACTGC +
Preference number: 3 (lower is better)
Translates to: GINTGGHCAPSM*SIHTHIAPFHC
Trigger: GCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
3UTR-3UTR CAA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTATGGGGCTGGGTTTTGTaGGAGATGATTCAGCATGTT +
Preference number: 3 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVWGWVL*EMIQHV
Trigger: AACATGCTGAATCATCTCCAACAAAACCCAGCCCCA...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
3UTR-3UTR CAA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAAGTTGGGGCTGGGTTTaGTTGGAGATGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVSWGWV*LEMIQH
Trigger: ATGCTGAATCATCTCCAACAAAACCCAGCCCCAACT...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCGATGAGGGCCCCGGCTaGCTGAGCAGGCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPDEGPG*LSRPRQ
Trigger: CTGCCGGGGCCTGCTCAGCCAGCCGGGGCCCTCATC...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGAGGGCCCCGGCTGGCTaGGCAGGCCCCGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLRAPAG*AGPGRR
Trigger: CCTTCTGCCGGGGCCTGCTCAGCCAGCCGGGGCCCT...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCTCTGCCAGGCGCAGCTaGAAGGCAGCTCGGACCCGC +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPSARRS*KAARTR
Trigger: GCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGA...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000297990.9
CDS-3UTR TCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGCCGGAACACTGTCCTaGTGTCCCCAGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSAGTLS*CPQVPG
Trigger: CCCGGGGACCTGGGGACATCAGGACAGTGTTCCGGC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTGTCGCTCCGCGAAGCTaGTCTCCAGCTGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAVAPRS*SPAGAG
Trigger: GCCGGCGCCAGCTGGAGAGCAGCTTCGCGGAGCGAC...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCAGCCGGTGGCACGCTaGCTGCAGGCGACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSQPVAR*LQATQW
Trigger: CCACTGAGTCGCCTGCAGGCAGCGTGCCACCGGCTG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAAGGGCCCCGGCTGGCTaGGCAGGCCCCGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVARAPAG*AGPGRR
Trigger: CCTTCTGCCGGGGCCTGCTCAGCCAGCCGGGGCCCT...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTACGGAGAAGGCCTGGTaGAAGTCAGCCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSTEKAW*KSARAG
Trigger: GCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGT...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGCGCTGGGTCCCATCCTaGTGTCCCCAGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWRWVPS*CPQVPG
Trigger: CCCGGGGACCTGGGGACATCAGGATGGGACCCAGCG...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379471.3
CDS-3UTR GCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCGCAGCTCGGACCCGCTaGACGGCCTCAGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSAARTR*TASASC
Trigger: ACAGGACGCTGAGGCCGTGCAGCGGGTCCGAGCTGC...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCGGGCCTCCACAGTCTaGACCAGGCCTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLRASTV*TRPSPS
Trigger: GCTGGGTGAAGGCCTGGTGCAGACTGTGGAGGCCCG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTGGGGGTAGGAGGCTCTaGGCTACCATCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAGGRRL*ATIPCR
Trigger: CCTGCAGGGGATGGTAGCCCAGAGCCTCCTACCCCC...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGCAGAGCTTCAGCCGGTaGCACGCTGCCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLQSFSR*HAACRR
Trigger: TCGCCTGCAGGCAGCGTGCCACCGGCTGAAGCTCTG...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCTCACAACCCGCTGGTTaGCCTCCCGTAGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPSQPAG*PPVGRH
Trigger: ATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGA...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR TCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGCTCTGTCTCAGGGACTaGGGGCACCCTCACAACCCG +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLLCLRD*GHPHNP
Trigger: CGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAG...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCCCCAAAGGCCTCCCTaGGCTGCGTCAGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSPQRPP*AASDRA
Trigger: AGCTCTATCTGACGCAGCTCAGGGAGGCCTTTGGGG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTTCCCCTGCAGGACTCTaGCCTCGGTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGASPAGL*PRYQAE
Trigger: CTCTGCCTGGTACCGAGGGCAGAGTCCTGCAGGGGA...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTAAGGCTGGGTGCTGCTaGTGCAGTCCGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAKAGCC*CSPCRA
Trigger: TGCCCTGCACGGACTGCAGCAGCAGCACCCAGCCTT...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGGGGCAGGGCTTCAGCTaGCAGGACCACAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLGQGFS*QDHKLL
Trigger: CAGCAGCTTGTGGTCCTGGCAGCTGAAGCCCTGCCC...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTTGGTTCCATCACCTCTaGCTCTCCAGTCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSWFHHL*LSSRSA
Trigger: CGCGGAGCGACTGGAGAGCCAGAGGTGATGGAACCA...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCACTCGAACCCCAGCTaGGAGCCATGCCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSHSNPS*EPCLVS
Trigger: ACTGACCAGGCATGGCTCCCAGCTGGGGTTCGAGTG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCCAGCTCAAGGACGCTaGTCAGTCCCTCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLPAQGR*SVPQAG
Trigger: TCCGGCCTGAGGGACTGACCAGCGTCCTTGAGCTGG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGCCGTGTGCGTGGCAGTaGCACGGCACTGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLPCAWQ*HGTADH
Trigger: ATGGTCTGCAGTGCCGTGCCACTGCCACGCACACGG...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACACGCACCCACCGCTTaGCCAGCCGTGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAHAPTA*PAVPHQ
Trigger: CTGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCAGCTGCTGCAGGATCTaGGCTGAGGGTCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPSCCRI*AEGPSC
Trigger: ACAGGATGGACCCTCAGCCCAGATCCTGCAGCAGCT...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCGGTGCCGCGGGATATaGCGAGGAGACAGGCGAATC +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLRCRGI*RGDRRI
Trigger: GATTCGCCTGTCTCCTCGCCATATCCCGCGGCACCG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTTTGAAGGGCTGCGGCTaGAAGCTGGTGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSLKGCG*KLVGFQ
Trigger: CTGGAAGCCCACCAGCTTCCAGCCGCAGCCCTTCAA...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGTCGCTCCGCGAAGCTaGTCTCCAGCTGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSVAPRS*SPAGAG
Trigger: GCCGGCGCCAGCTGGAGAGCAGCTTCGCGGAGCGAC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTTCCCCTCTTTGCCTGTaGCTTCCAGGGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSSPLCL*LPGLVP
Trigger: TGGAACCAGCCCTGGAAGGCACAGGCAAAGAGGGGA...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCTGGTCGGATGCAGGTaGCCAGAAGGTAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLLVGCR*PEGSCP
Trigger: TGGGCAGCTACCTTCTGGGCACCTGCATCCGACCAG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCCAGACCTTCAGAAGTaGCACGCCATCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSPDLQK*HAILQA
Trigger: GGCCTGAAGGATGGCGTGGCACTTCTGAAGGTCTGG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCAGCCGGTGGCACGCTaGCTGCAGGCGACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHQPVAR*LQATQW
Trigger: CCACTGAGTCGCCTGCAGGCAGCGTGCCACCGGCTG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCTGCGGATCTCCACCTaGTCCTCCACAGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSLRIST*SSTVSS
Trigger: TGAGCTCACTGTGGAGGAGCAGGTGGAGATCCGCAG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACATGACGGGGAGCTGTaGCCGAGCTGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAHDGEL*PSCQEA
Trigger: GGCTTCCTGGCAGCTCGGGCACAGCTCCCCGTCATG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCCACAGCCTGGCGGTaGCGCGGGATATGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWSTAWR*RGIWRG
Trigger: TCCTCGCCATATCCCGCGGCACCGCCAGGCTGTGGA...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCAGGAGGCCCTTCGCTaGAGGTTCAGCCAATGTACG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSQEALR*RFSQCT
Trigger: CGTACATTGGCTGAACCTCCAGCGAAGGGCCTCCTG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAACGGAGAAGGCCTGGTaGAAGTCAGCCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRATEKAW*KSARAG
Trigger: GCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGT...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTACAACGGAGAAGGCCTaGTGGAAGTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGATTEKA*WKSARA
Trigger: GGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGT...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACCTGCTCCAGGAGGGTaGTCAGGGGGCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSPAPGG*SGGPKQ
Trigger: CTGCTTTGGGCCCCCTGACCACCCTCCTGGAGCAGG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCGAATGGCTCCGTCCTaGAAACGCCGAAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGARMAPS*KRRSSE
Trigger: CTCGGAGCTTCGGCGTTTCCAGGACGGAGCCATTCG...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCACAGCTTCCCGAATaGCTCCGTCCTGGAAACGCC +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAPQLPE*LRPGNA
Trigger: GGCGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGG...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTTGTGTAGCGCAGCACTaGGTGAGCTCCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSCVAQH*VSSLNS
Trigger: GCTGTTCAGGGAGCTCACCCAGTGCTGCGCTACACA...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCGAGATCATCCCCTCTaGGCTCTGCACCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSRDHPL*ALHLLQ
Trigger: CTGAAGGAGGTGCAGAGCCCAGAGGGGATGATCTCG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACCACGCACCCACCGCTTaGCCAGCCGTGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINHAPTA*PAVPHQ
Trigger: CTGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTG...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCCCTCACCAAGAAGCTaGGCACGCACCCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSPSPRS*ARTHRL
Trigger: CAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCGGCGAGTCCACAGCCTaGCGGTGCCGCGGGATATGG +
Preference number: 4 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSGESTA*RCRGIW
Trigger: CCATATCCCGCGGCACCGCCAGGCTGTGGACTCGCC...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCTCCCACTCCTCTTCTaGGATGGTGAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLLPLLF*DGEAQE
Trigger: CTCCTGGGCCTCACCATCCCAGAAGAGGAGTGGGAG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPVPSLS*LPLLFW
Trigger: CCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAAC...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCGCCATGCCTGGTCAGTaGGCTCTGTCTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSAMPGQ*ALSQGL
Trigger: CAGTCCCTGAGACAGAGCTCACTGACCAGGCATGGC...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCGGCCGCAGCAACAGTaGGGGTTTCAGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCARPQQQ*GFQVAA
Trigger: GGCTGCCACCTGAAACCCTCACTGTTGCTGCGGCCG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGATGCAGACGTACAGTaGCCAGGCGCTCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSDADVQ*PGAHPF
Trigger: GAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGCCGGAACACTGTCCTaGTGTCCCCAGGTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSAGTLS*CPQVPG
Trigger: CCCGGGGACCTGGGGACATCAGGACAGTGTTCCGGC...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCCCAGCTGGGAGCCATaGCTGGTCAGTGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSPSWEP*LVSELC
Trigger: ACAGAGCTCACTGACCAGGCATGGCTCCCAGCTGGG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGCCAGACCTTCAGAAGTaGCACGCCATCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLPDLQK*HAILQA
Trigger: GGCCTGAAGGATGGCGTGGCACTTCTGAAGGTCTGG...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCTGGGACATAGAGGCTaGCTCCCAGACCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLLGHRG*LPDHSF
Trigger: GAAGCTGTGGTCTGGGAGGCAGCCTCTATGTCCCAG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR GCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGTTGTGTCAACAGCTCTaGCAGGCGCAGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLLCQQL*QAQLEG
Trigger: GCCTTCCAGCTGCGCCTGGCAGAGCTGTTGACACAA...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACCAGAGAAGGCTGGGTaGTGCTGCTGCAGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAPEKAG*CCCSPC
Trigger: GCACGGACTGCAGCAGCAGCACCCAGCCTTCTCTGG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCACCGCTTGGCCAGCCGTaGCACACCAGAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAPLGQP*HTREGW
Trigger: CCAGCCTTCTCTGGTGTGGCACGGCTGGCCAAGCGG...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGGAGCTGTGCCCGAGCTaGCAGGAAGCCACTGCGGAT +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWELCPS*QEATAD
Trigger: ATCCGCAGTGGCTTCCTGGCAGCTCGGGCACAGCTC...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACTCCACAGCCTGGCGGTaGCGCGGGATATGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINSTAWR*RGIWRG
Trigger: TCCTCGCCATATCCCGCGGCACCGCCAGGCTGTGGA...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGAGGCCTTGAAGGGCTaGGGCTGGAAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAEALKG*GWKLVG
Trigger: GCCCACCAGCTTCCAGCCGCAGCCCTTCAAGGCCTC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACGAGGCCTTGAAGGGCTaGGGCTGGAAGCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINEALKG*GWKLVG
Trigger: GCCCACCAGCTTCCAGCCGCAGCCCTTCAAGGCCTC...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGCTCGAGACATCACCATaGGCCCCTTTGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLLETSP*APLCWR
Trigger: CCTCCAGCACAAAGGGGCGCATGGTGATGTCTCGAG...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTACGGGTAGCCCCCAGTaGTTTTTGCACCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSTGSPQ*FLHLSK
Trigger: CTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCGT...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGGCTGGGAGCCATGCCTaGTCAGTGAGCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLAGSHA*SVSSVS
Trigger: TGAGACAGAGCTCACTGACCAGGCATGGCTCCCAGC...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCCCTGTAGGATTTCCCTaGGCATGGTCAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPPVGFP*AWSVPH
Trigger: ATGTGGCACTGACCATGCCCAGGGAAATCCTACAGG...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCGCGGAAGAAGTCAGGTaGAGGGCACGGATGCAGACG +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSAEEVR*RARMQT
Trigger: CGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGC...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACCAGTAAACCCACCCTaGCCCTTGTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSPVNPP*PLSSSR
Trigger: GCGGGAGCTGGACAAGGGCCAGGGTGGGTTTACTGG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCCCTGGTAGCCACTCATaGTGGTATGGATCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPPGSHS*WYGSCV
Trigger: CACGCAAGATCCATACCACCATGAGTGGCTACCAGG...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGTGTGTAGCGCAGCACTaGGTGAGCTCCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLCVAQH*VSSLNS
Trigger: GCTGTTCAGGGAGCTCACCCAGTGCTGCGCTACACA...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTACGGACTGGAGTTGGTaGGAACACCTCTGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSTDWSW*EHLCVA
Trigger: CGCTACACAGAGGTGTTCCCACCAACTCCAGTCCGT...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACGCAGAAGGAGGCAGCTaGCGAGTCCACAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINAEGGS*RVHSLA
Trigger: CGCCAGGCTGTGGACTCGCCAGCTGCCTCCTTCTGC...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCCTCTGTCTCAGGGACTaGGGGCACCCTCACAACCCG +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVLCLRD*GHPHNP
Trigger: CGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAG...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCACGGCCGCAGCAACAGTaGGGGTTTCAGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPRPQQQ*GFQVAA
Trigger: GGCTGCCACCTGAAACCCTCACTGTTGCTGCGGCCG...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR TCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCGGGGCCCAAAGCAGCTaGGACATAGTCCCCACCATT +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSGAQSS*DIVPTI
Trigger: AATGGTGGGGACTATGTCTCAGCTGCTTTGGGCCCC...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCACTGGGGGTCGAGAGTaGGCCAGCAGGTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVTGGRE*ASRFSR
Trigger: TCGGCTGAACCTGCTGGCTCACTCTCGACCCCCAGT...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTACTGGGGGTCGAGAGTaGGCCAGCAGGTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCATGGRE*ASRFSR
Trigger: TCGGCTGAACCTGCTGGCTCACTCTCGACCCCCAGT...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCCCACAGTAGGCGACTaGGGTCGTCGTAGCAACGTA +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSPTVGD*GRRSNV
Trigger: TACGTTGCTACGACGACCTCAGTCGCCTACTGTGGG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR TCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACTGCAGGATCTGGGCTaGGGGTCCATCCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSLQDLG*GSILCP
Trigger: TGGACACAGGATGGACCCTCAGCCCAGATCCTGCAG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACTGGTCGGATGCAGGTaGCCAGAAGGTAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRALVGCR*PEGSCP
Trigger: TGGGCAGCTACCTTCTGGGCACCTGCATCCGACCAG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTAGGAGAAGCAAACACTaGCAAAGAGGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGARRSKH*QRGGPG
Trigger: CCCAGGACCCCCTCTTTGGCAGTGTTTGCTTCTCCT...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAGGGHG*RRTVTR
Trigger: CCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACC...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAAGCCTCAGGCTGGTCTaGCTCTGGACCCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRASLRLV*LWTQLK
Trigger: CTTGAGCTGGGTCCAGAGGCAGACCAGCCTGAGGCT...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCATCCCCTCTGGGCTCTaGACCTCCTTCAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSIPSGL*TSFRIW
Trigger: CCAGATCCTGAAGGAGGTGCAGAGCCCAGAGGGGAT...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGTGAGCAGTGGCAACTaGCTTGTGTCTCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSVSSGN*LVSLSR
Trigger: CCTTGAGAGAGACACAAGGCAGTTGCCACTGCTCAC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTGTGAAGGGCTCAGGGTaGAGGAAAAGGGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAVKGSG*RKRAAA
Trigger: GGCCGCTGCCCTTTTCCTGCACCCTGAGCCCTTCAC...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTCATGACGGGGAGCTGTaGCCGAGCTGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSHDGEL*PSCQEA
Trigger: GGCTTCCTGGCAGCTCGGGCACAGCTCCCCGTCATG...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCATGACGGGGAGCTGTaGCCGAGCTGCCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSHDGEL*PSCQEA
Trigger: GGCTTCCTGGCAGCTCGGGCACAGCTCCCCGTCATG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACGGGCCACCATGCCCCTaGCCCAATGCTGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHGPPCP*PNAGAS
Trigger: TGATGCTCCAGCATTGGGGCAGGGGCATGGTGGCCC...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGCCCCCAGTGCTTTTTaGACCTCTCCAAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSAPSAF*TSPRLG
Trigger: ACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCAAGCTGCTCTCCAGCTaGCGCCGGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVKLLSS*RRPHHS
Trigger: TGAGTGATGGGGCCGGCGCCAGCTGGAGAGCAGCTT...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAAGCTGCTCTCCAGCTaGCGCCGGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHKLLSS*RRPHHS
Trigger: TGAGTGATGGGGCCGGCGCCAGCTGGAGAGCAGCTT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATGGTTCCATCACCTCTaGCTCTCCAGTCGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAWFHHL*LSSRSA
Trigger: CGCGGAGCGACTGGAGAGCCAGAGGTGATGGAACCA...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCCTGTAGGATTTCCCTaGGCATGGTCAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSPVGFP*AWSVPH
Trigger: ATGTGGCACTGACCATGCCCAGGGAAATCCTACAGG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGCGGAAGAAGTCAGGTaGAGGGCACGGATGCAGACG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSAEEVR*RARMQT
Trigger: CGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCACATTGTTCTTGGTTaGCAGCAAGCGGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSHIVLG*QQAARA
Trigger: CGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCCCAGTAAACCCACCCTaGCCCTTGTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPPVNPP*PLSSSR
Trigger: GCGGGAGCTGGACAAGGGCCAGGGTGGGTTTACTGG...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGGTCATCAACAGCAGGTaGAACCCGTCGTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLVINSR*NPSSAL
Trigger: CAGAGCTGACGACGGGTTCCACCTGCTGTTGATGAC...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTCAGAGCTTCAGCCGGTaGCACGCTGCCTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSQSFSR*HAACRR
Trigger: TCGCCTGCAGGCAGCGTGCCACCGGCTGAAGCTCTG...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGTCCCACTCTGGGACTaGGGGTCGAGAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPVPLWD*GSRVSQ
Trigger: CTGGCTCACTCTCGACCCCCAGTCCCAGAGTGGGAC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAGCTGATGTCCCACTCTaGGACTGGGGGTCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAADVPL*DWGSRV
Trigger: CACTCTCGACCCCCAGTCCCAGAGTGGGACATCAGC...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGGCTGATGTCCCACTCTaGGACTGGGGGTCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWADVPL*DWGSRV
Trigger: CACTCTCGACCCCCAGTCCCAGAGTGGGACATCAGC...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCCAGCTCAAGGACGCTaGTCAGTCCCTCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHPAQGR*SVPQAG
Trigger: TCCGGCCTGAGGGACTGACCAGCGTCCTTGAGCTGG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCCTCACCAAGAAGCTaGGCACGCACCCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAPSPRS*ARTHRL
Trigger: CAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCAGCTGCTGCAGGATCTaGGCTGAGGGTCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSSCCRI*AEGPSC
Trigger: ACAGGATGGACCCTCAGCCCAGATCCTGCAGCAGCT...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTGCCCAGGAGACTACATaGGCCACCATGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIAQETT*ATMPLP
Trigger: GGGCAGGGGCATGGTGGCCCATGTAGTCTCCTGGGC...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTGCCCAGGAGACTACATaGGCCACCATGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAAAQETT*ATMPLP
Trigger: GGGCAGGGGCATGGTGGCCCATGTAGTCTCCTGGGC...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACTCCTCCTTGGGCCCTaGGAGCTCCTGGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQLLLGP*ELLGSK
Trigger: CTTACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAG...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTACTGGGGGTCGAGAGTaGGCCAGCAGGTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAATGGRE*ASRFSR
Trigger: TCGGCTGAACCTGCTGGCTCACTCTCGACCCCCAGT...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACCCACAGTAGGCGACTaGGGTCGTCGTAGCAACGTA +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSPTVGD*GRRSNV
Trigger: TACGTTGCTACGACGACCTCAGTCGCCTACTGTGGG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR TCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCATTGTGCTGGAGGCCTTaGAGGGCTGCGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPLCWRP*RAAAGS
Trigger: GCTTCCAGCCGCAGCCCTTCAAGGCCTCCAGCACAA...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCGGGTTTTGTTGGAGATaGTTCAGCATGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPGFCWR*FSMFSQ
Trigger: CTGGCTGAACATGCTGAATCATCTCCAACAAAACCC...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCCAGGTTAAAATTATGTaGAAGGGGCAGACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPQVKIM*KGQTGQ
Trigger: CTGGCCTGTCTGCCCCTTTCACATAATTTTAACCTG...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000297990.9
CDS-3UTR GCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACCCAGCTGGGAGCCATaGCTGGTCAGTGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQPSWEP*LVSELC
Trigger: ACAGAGCTCACTGACCAGGCATGGCTCCCAGCTGGG...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCACTGGTCGGATGCAGGTaGCCAGAAGGTAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVALVGCR*PEGSCP
Trigger: TGGGCAGCTACCTTCTGGGCACCTGCATCCGACCAG...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPGGGHG*RRTVTR
Trigger: CCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINGGGHG*RRTVTR
Trigger: CCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACC...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAATGGGCTACCATCCCCTaGAGGACTCTGCCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQWATIP*RTLPSV
Trigger: TACCGAGGGCAGAGTCCTGCAGGGGATGGTAGCCCA...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTAAGGACATCCGTGTaGGTGGCAGTGGCACGGCAC +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRALRTSV*VAVARH
Trigger: GTGCCGTGCCACTGCCACGCACACGGATGTCCTTAA...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCAAGGCTGGGTGCTGCTaGTGCAGTCCGTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACKAGCC*CSPCRA
Trigger: TGCCCTGCACGGACTGCAGCAGCAGCACCCAGCCTT...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297990.9
CDS-3UTR GCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGAGAAGGCTGGGTGCTaGTGCTGCAGTCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSEKAGC*CCSPCR
Trigger: CCTGCACGGACTGCAGCAGCAGCACCCAGCCTTCTC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCCTGCCAGGAAGCCACTaGGGATCTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPLPGSH*GSPPAP
Trigger: AGGAGCAGGTGGAGATCCGCAGTGGCTTCCTGGCAG...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACCTGCCAGGAAGCCACTaGGGATCTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINLPGSH*GSPPAP
Trigger: AGGAGCAGGTGGAGATCCGCAGTGGCTTCCTGGCAG...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACTGCCAGGAAGCCACTaGGGATCTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQLPGSH*GSPPAP
Trigger: AGGAGCAGGTGGAGATCCGCAGTGGCTTCCTGGCAG...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCGAGCTGTGCCCGAGCTaGCAGGAAGCCACTGCGGAT +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACELCPS*QEATAD
Trigger: ATCCGCAGTGGCTTCCTGGCAGCTCGGGCACAGCTC...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGCTCGAGACATCACCATaGGCCCCTTTGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWLETSP*APLCWR
Trigger: CCTCCAGCACAAAGGGGCGCATGGTGATGTCTCGAG...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAAAGCTGCTCTCCAGCTaGCGCCGGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPKLLSS*RRPHHS
Trigger: TGAGTGATGGGGCCGGCGCCAGCTGGAGAGCAGCTT...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAACCCTCACAACCCGCTaGTTGACCTCCCGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRATLTTR*LTSRRK
Trigger: CTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGT...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGCTGGGAGCCATGCCTaGTCAGTGAGCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSAGSHA*SVSSVS
Trigger: TGAGACAGAGCTCACTGACCAGGCATGGCTCCCAGC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTATCCACATTGATGTCTaGTCGGATGCAGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAIHIDV*SDAGAQ
Trigger: CTGGGCACCTGCATCCGACCAGACATCAATGTGGAT...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTGGATTTCCCTGGGCATaGTCAGTGCCACATCCACAT +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAGFPWA*SVPHPH
Trigger: ATGTGGATGTGGCACTGACCATGCCCAGGGAAATCC...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGCGGAAGAAGTCAGGTaGAGGGCACGGATGCAGACG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPAEEVR*RARMQT
Trigger: CGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCGGGCTGAACTCAGAATaGTTGACAGCAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPGLNSE*LTAAAN
Trigger: ATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCC...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCCCGGATCATGGGTTTaGGAGTCATCAACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLPGSWV*ESSTAG
Trigger: ACCTGCTGTTGATGACTCCCAAACCCATGATCCGGG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAATTGTCCTGCAGCTCTaGCCAGAGCTTCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAIVLQL*PELQPV
Trigger: CACCGGCTGAAGCTCTGGCCAGAGCTGCAGGACAAT...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATTGTCCTGCAGCTCTaGCCAGAGCTTCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSIVLQL*PELQPV
Trigger: CACCGGCTGAAGCTCTGGCCAGAGCTGCAGGACAAT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAGTCCCACTCTGGGACTaGGGGTCGAGAGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPVPLWD*GSRVSQ
Trigger: CTGGCTCACTCTCGACCCCCAGTCCCAGAGTGGGAC...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTTGCTTTGGTGGATCTTaGCTGATGTCCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGACFGGS*LMSHSG
Trigger: CCCAGAGTGGGACATCAGCCAAGATCCACCAAAGCA...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCACAGCTTCCCGAATaGCTCCGTCCTGGAAACGCC +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAPQLPE*LRPGNA
Trigger: GGCGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATGGGTGACCACCTGGTaGGGAATAAGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAWVTTW*GIRRFW
Trigger: CCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCA...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTTGGACGGACTGGAGTTaGTGGGAACACCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAWTDWS*WEHLCV
Trigger: TACACAGAGGTGTTCCCACCAACTCCAGTCCGTCCA...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGGAAGGCTGGACGGACTaGAGTTGGTGGGAACACCTC +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWEGWTD*SWWEHL
Trigger: GAGGTGTTCCCACCAACTCCAGTCCGTCCAGCCTTC...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCGACAAACCACGGTCATaGGCTCCACGTAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVDKPRS*APRRPD
Trigger: GTCCGGCCTACGTGGAGCCCATGACCGTGGTTTGTC...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCGAAGGAAGCCAACCTaGGGGGAACTCGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSRRKPT*GELGGV
Trigger: CACCCCTCCGAGTTCCCCCCAGGTTGGCTTCCTTCG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGAGCTGCTGCAGGATCTaGGCTGAGGGTCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWSCCRI*AEGPSC
Trigger: ACAGGATGGACCCTCAGCCCAGATCCTGCAGCAGCT...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCACTCCCACTCCTCTTCTaGGATGGTGAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVALPLLF*DGEAQE
Trigger: CTCCTGGGCCTCACCATCCCAGAAGAGGAGTGGGAG...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACTCCTCCTTGGGCCCTaGGAGCTCCTGGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPLLLGP*ELLGSK
Trigger: CTTACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAG...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAAAGATCACCTCAGGCTaGGGGCGAGGGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSKITSG*GRGMGL
Trigger: TAAGCCCATCCCTCGCCCCCAGCCTGAGGTGATCTT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACTCAGACCCCCTGGTGTaGATTGGCAGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINSDPLV*IGRAGH
Trigger: ATGCCCTGCCCTGCCAATCCACACCAGGGGGTCTGA...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR CCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTGGAGCTCAGACCCCCTaGTGTGGATTGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIGAQTP*CGLAGQ
Trigger: CTGCCCTGCCAATCCACACCAGGGGGTCTGAGCTCC...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR TCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTCACAACCCGCTGGTTaGCCTCCCGTAGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPSQPAG*PPVGRH
Trigger: ATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGA...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGTGCCACATCCACATTaGTGTCTGGTCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSVPHPH*CLVGCR
Trigger: CCTGCATCCGACCAGACATCAATGTGGATGTGGCAC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGGGGCCCAAAGCAGCTaGGACATAGTCCCCACCATT +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPGAQSS*DIVPTI
Trigger: AATGGTGGGGACTATGTCTCAGCTGCTTTGGGCCCC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGGAGCCGGGGCAGCAGTaGGGACCGCTCCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLEPGQQ*GPLPQS
Trigger: ACTCTGCGGGAGCGGTCCTCACTGCTGCCCCGGCTC...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR TCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGAGCCGGGGCAGCAGTaGGGACCGCTCCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSEPGQQ*GPLPQS
Trigger: ACTCTGCGGGAGCGGTCCTCACTGCTGCCCCGGCTC...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR TCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCCTGCAGGATCTGGGCTaGGGGTCCATCCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACLQDLG*GSILCP
Trigger: TGGACACAGGATGGACCCTCAGCCCAGATCCTGCAG...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAAGTCCCCGGGGATCCATaGGCTGCTTCTCTAACATGG +
Preference number: 4 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQVPGDP*AASLTW
Trigger: CCATGTTAGAGAAGCAGCTCATGGATCCCCGGGGAC...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAACTGCTCAGTGTCGGTaGTGTGACTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSTAQCR*CDSEGP
Trigger: TGGCCCTTCTGAGTCACATCACCGACACTGAGCAGT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATGGCAGTTTGTGACATaGACGGGCAAACAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAWQFVT*TGKQPG
Trigger: CCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCA...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGGGGTGTAGACCAGACTaGAAGGAGGCAGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWGCRPD*KEAAFS
Trigger: GGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACCC...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCGGTAGAGGGCACGCTTaGGGAAGTAGCGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVGRGHA*GSSAGS
Trigger: TGAACCAGCGCTACTTCCGCAAGCGTGCCCTCTACC...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAAGGAGAAGCAAACACTaGCAAAGAGGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSRRSKH*QRGGPG
Trigger: CCCAGGACCCCCTCTTTGGCAGTGTTTGCTTCTCCT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTTGGGCTACCATCCCCTaGAGGACTCTGCCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSWATIP*RTLPSV
Trigger: TACCGAGGGCAGAGTCCTGCAGGGGATGGTAGCCCA...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTTGGGCTACCATCCCCTaGAGGACTCTGCCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAAWATIP*RTLPSV
Trigger: TACCGAGGGCAGAGTCCTGCAGGGGATGGTAGCCCA...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCCCAGACCTTCAGAAGTaGCACGCCATCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSPDLQK*HAILQA
Trigger: GGCCTGAAGGATGGCGTGGCACTTCTGAAGGTCTGG...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR GCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCTCAGTGGACGGAGATaGAGGACATGGTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSLSGRR*RTWSKA
Trigger: GGCTTTTGACCATGTCCTGCATCTCCGTCCACTGAG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCCCCACCATTGTCCTaGAGCTCTGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVASPPLS*SSGQSF
Trigger: GAAGCTCTGGCCAGAGCTGCAGGACAATGGTGGGGA...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGGTCCCAGAGTCTTTGTaGTTTGGTGGATCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLVPESL*FGGSWL
Trigger: CAGCCAAGATCCACCAAAGCACAAAGACTCTGGGAC...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACATCCCCTCTGGGCTCTaGACCTCCTTCAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHIPSGL*TSFRIW
Trigger: CCAGATCCTGAAGGAGGTGCAGAGCCCAGAGGGGAT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTGCTGGGTGCTGCTGCTaGAGTCCGTGCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACAGCCC*SPCRAL
Trigger: CAGTGCCCTGCACGGACTGCAGCAGCAGCACCCAGC...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297990.9
CDS-3UTR GCA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCCTGCGGATCTCCACCTaGTCCTCCACAGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSLRIST*SSTVSS
Trigger: TGAGCTCACTGTGGAGGAGCAGGTGGAGATCCGCAG...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAAGGACCACAAGCTGCTaGAGGATCTGGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVARTTSC*RIWAEG
Trigger: ACCCTCAGCCCAGATCCTGCAGCAGCTTGTGGTCCT...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCTACATGGGCCACCATaGCCCTGCCCCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLHGPP*PCPNAG
Trigger: TCCAGCATTGGGGCAGGGGCATGGTGGCCCATGTAG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCATGTAGACTTAGGGTaGAGCACGAAGGATGATGGC +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLHVDLG*STKDDG
Trigger: GCCATCATCCTTCGTGCTGCACCCTAAGTCTACATG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR CCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTCACTCGAACCCCAGCTaGGAGCCATGCCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIHSNPS*EPCLVS
Trigger: ACTGACCAGGCATGGCTCCCAGCTGGGGTTCGAGTG...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAAGCGCACATTGTTCTTaGTTGGCAGCAAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSSAHCS*LAASGT
Trigger: CGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCCTGGTAGCCACTCATaGTGGTATGGATCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSPGSHS*WYGSCV
Trigger: CACGCAAGATCCATACCACCATGAGTGGCTACCAGG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTACAACGGAGAAGGCCTaGTGGAAGTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHITTEKA*WKSARA
Trigger: GGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGT...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGGTCATCAACAGCAGGTaGAACCCGTCGTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWVINSR*NPSSAL
Trigger: CAGAGCTGACGACGGGTTCCACCTGCTGTTGATGAC...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCCTGCAGGCGACTCAGTaGACGGAGATGCAGGACATG +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVLQATQ*TEMQDM
Trigger: CATGTCCTGCATCTCCGTCCACTGAGTCGCCTGCAG...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAGCTGATGTCCCACTCTaGGACTGGGGGTCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPADVPL*DWGSRV
Trigger: CACTCTCGACCCCCAGTCCCAGAGTGGGACATCAGC...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCAGAGTCTTTGTGCTTTaGTGGATCTTGGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPRVFVL*WILADV
Trigger: GACATCAGCCAAGATCCACCAAAGCACAAAGACTCT...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTAGGCTGGTCTGCCTCTaGACCCAGCTCAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAARLVCL*TQLKDA
Trigger: AGCGTCCTTGAGCTGGGTCCAGAGGCAGACCAGCCT...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGTGGGTGACCACCTaGTGGGGAATAAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHRWVTT*WGIRRF
Trigger: GAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAAGGTGGGTGACCACCTaGTGGGGAATAAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVARWVTT*WGIRRF
Trigger: GAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCT...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTTGGAGTGCCAAGAGGTaGGTGACCACCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSWSAKR*VTTWWG
Trigger: TCCCCACCAGGTGGTCACCCACCTCTTGGCACTCCA...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACCTCCTCACCTGTGCTaGAGGTCTCTTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAPPHLC*RSLSGL
Trigger: AAGGCCTGAAAGAGACCTCCAGCACAGGTGAGGAGG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTGAAGGCTGGACGGACTaGAGTTGGTGGGAACACCTC +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAEGWTD*SWWEHL
Trigger: GAGGTGTTCCCACCAACTCCAGTCCGTCCAGCCTTC...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCGAGATCATCCCCTCTaGGCTCTGCACCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHRDHPL*ALHLLQ
Trigger: CTGAAGGAGGTGCAGAGCCCAGAGGGGATGATCTCG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGAGTTTTTGCGGTCTTaGGGGGTAACAATGACCATG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSEFLRS*GVTMTM
Trigger: CATGGTCATTGTTACCCCCCAAGACCGCAAAAACTC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTTTGAAGGGCTGCGGCTaGAAGCTGGTGGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLKGCG*KLVGFQ
Trigger: CTGGAAGCCCACCAGCTTCCAGCCGCAGCCCTTCAA...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCTCCCACTCCTCTTCTaGGATGGTGAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLPLLF*DGEAQE
Trigger: CTCCTGGGCCTCACCATCCCAGAAGAGGAGTGGGAG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCGCCCCTTTGTGCTaGAGGCCTCTTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSCAPLC*RPLSGL
Trigger: AAGGCCTGAAAGAGGCCTCCAGCACAAAGGGGCGCA...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353159.6
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGCTTCTCTCAGGCTATaGAGCTCAGACCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAASLRL*SSDPLV
Trigger: CACCAGGGGGTCTGAGCTCCATAGCCTGAGAGAAGC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR CCA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGGGGAACTAAAGGGCTaGAGTAAGCAAAGAATCCAG +
Preference number: 4 (lower is better)
Translates to: RLKGGSILLLGPWELLGSGELKG*SKQRIQ
Trigger: CTGGATTCTTTGCTTACTCCAGCCCTTTAGTTCCCC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR TCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACGGCCGCAGCAACAGTaGGGGTTTCAGGTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTRPQQQ*GFQVAA
Trigger: GGCTGCCACCTGAAACCCTCACTGTTGCTGCGGCCG...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGGGGCCCAAAGCAGCTaGGACATAGTCCCCACCATT +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSGAQSS*DIVPTI
Trigger: AATGGTGGGGACTATGTCTCAGCTGCTTTGGGCCCC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTTGGTGGATCTTGGCTaGTGTCCCACTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPLVDLG*CPTLGL
Trigger: CAGTCCCAGAGTGGGACATCAGCCAAGATCCACCAA...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAGTCCCCGGGGATCCATaGGCTGCTTCTCTAACATGG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPVPGDP*AASLTW
Trigger: CCATGTTAGAGAAGCAGCTCATGGATCCCCGGGGAC...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTCCTCTTCTGGGATGGTaGGGCCCAGGAGACTACATG +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSPLLGW*GPGDYM
Trigger: CATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGG...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTCCTCTTCTGGGATGGTaGGGCCCAGGAGACTACATG +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIPLLGW*GPGDYM
Trigger: CATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGG...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACACTGCTCAGTGTCGGTaGTGTGACTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHTAQCR*CDSEGP
Trigger: TGGCCCTTCTGAGTCACATCACCGACACTGAGCAGT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATGGCAGTTTGTGACATaGACGGGCAAACAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAWQFVT*TGKQPG
Trigger: CCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCA...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCGGGTGTAGACCAGACTaGAAGGAGGCAGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVGCRPD*KEAAFS
Trigger: GGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACCC...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGGGTGTAGACCAGACTaGAAGGAGGCAGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPGCRPD*KEAAFS
Trigger: GGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACCC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGCTCCTTGTACAGTTCTaGCCTGCTGAGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWLLVQF*PAELHW
Trigger: CCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAG...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGTAGAGGGCACGCTTaGGGAAGTAGCGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSGRGHA*GSSAGS
Trigger: TGAACCAGCGCTACTTCCGCAAGCGTGCCCTCTACC...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCGGTGGCACGCTGCCTaGAGGCGACTCAGTGGACGG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFRWHAA*RRLSGR
Trigger: CCGTCCACTGAGTCGCCTGCAGGCAGCGTGCCACCG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTCTGGGACATAGAGGCTaGCTCCCAGACCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAALGHRG*LPDHSF
Trigger: GAAGCTGTGGTCTGGGAGGCAGCCTCTATGTCCCAG...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACACCGCTTGGCCAGCCGTaGCACACCAGAGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTPLGQP*HTREGW
Trigger: CCAGCCTTCTCTGGTGTGGCACGGCTGGCCAAGCGG...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTAGGACCACAAGCTGCTaGAGGATCTGGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAARTTSC*RIWAEG
Trigger: ACCCTCAGCCCAGATCCTGCAGCAGCTTGTGGTCCT...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTACGGGCCTCCACAGTCTaGACCAGGCCTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALRASTV*TRPSPS
Trigger: GCTGGGTGAAGGCCTGGTGCAGACTGTGGAGGCCCG...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp TCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGAGAGGTCCAATGTCCTaGTGTCCGTCTACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: STLGSGINTGGHCAPSMWRGPMS*CPSTAC
Trigger: GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCT...CCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAAGAGGTCCAATGTCCTaGTGTCCGTCTACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSRGPMS*CPSTAC
Trigger: GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTATGGGGTCTCTCTGTTaGCCAGATTGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: GVDQTERRQHSPPWALGAMGSLC*PDWSRT
Trigger: AGTTCTAGACCAATCTGGGCAACAGAGAGACCCCAT...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAACCCTCACAACCCGCTaGTTGACCTCCCGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPTLTTR*LTSRRK
Trigger: CTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGT...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACAACAGTAACCTGGGCTaGGGGCAGGAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINNSNLG*GQEAET
Trigger: TGTTTCCGCTTCCTGCCCCCAGCCCAGGTTACTGTT...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATCCACATTGATGTCTaGTCGGATGCAGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSIHIDV*SDAGAQ
Trigger: CTGGGCACCTGCATCCGACCAGACATCAATGTGGAT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGCGCACATTGTTCTTaGTTGGCAGCAAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHSAHCS*LAASGT
Trigger: CGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTCTGCAGGCGACTCAGTaGACGGAGATGCAGGACATG +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHILQATQ*TEMQDM
Trigger: CATGTCCTGCATCTCCGTCCACTGAGTCGCCTGCAG...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACACCTGCTCCAGGAGGGTaGTCAGGGGGCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTPAPGG*SGGPKQ
Trigger: CTGCTTTGGGCCCCCTGACCACCCTCCTGGAGCAGG...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCCGGGATCCCCAGAACTaGCGGAATTTAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSRDPQN*RNLAAS
Trigger: TGAGGCTGCTAAATTCCGCCAGTTCTGGGGATCCCG...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCGGGATCCCCAGAACTaGCGGAATTTAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCARDPQN*RNLAAS
Trigger: TGAGGCTGCTAAATTCCGCCAGTTCTGGGGATCCCG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTTGGGTGACCACCTGGTaGGGAATAAGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSWVTTW*GIRRFW
Trigger: CCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCA...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCAGGTGGGTGACCACCTaGTGGGGAATAAGGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACRWVTT*WGIRRF
Trigger: GAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCT...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGTGGACACAGGTTTCTaGGATGTCAGCATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSVDTGF*DVSMEC
Trigger: GCACTCCATGCTGACATCCCAGAAACCTGTGTCCAC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTTCTGCCAGGCGCAGCTaGAAGGCAGCTCGGACCCGC +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFSARRS*KAARTR
Trigger: GCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGA...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGATGAGGGCCCCGGCTaGCTGAGCAGGCCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIDEGPG*LSRPRQ
Trigger: CTGCCGGGGCCTGCTCAGCCAGCCGGGGCCCTCATC...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCAGCTTGCTCCAGAGCTaGGATCACACAGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSSLLQS*DHTVHL
Trigger: GAGGTGGACTGTGTGATCCCAGCTCTGGAGCAAGCT...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACCCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINPAGPP*RIHVQG
Trigger: TCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGG...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCCCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVPAGPP*RIHVQG
Trigger: TCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGG...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCATCAGAGAGAAAGTTaGGGCTGGGTTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLHQRES*GWVLLE
Trigger: CTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACCCCTGCCCCAATGCTaGAGCATCAGAGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSPLPQC*SIREKV
Trigger: AACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAVPSLS*LPLLFW
Trigger: CCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAAC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTCTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAALHPGK*HQHRRA
Trigger: TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAG...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPLHPGK*HQHRRA
Trigger: TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAG...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCACTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPLHPGK*HQHRRA
Trigger: TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAG...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCCCACTGTCTCCACCCTaGGAAGTGGCATCAACACAG +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVPLSPP*EVASTQ
Trigger: CTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGG...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAAAGATCACCTCAGGCTaGGGGCGAGGGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPKITSG*GRGMGL
Trigger: TAAGCCCATCCCTCGCCCCCAGCCTGAGGTGATCTT...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTAAGATCACCTCAGGCTaGGGGCGAGGGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSKITSG*GRGMGL
Trigger: TAAGCCCATCCCTCGCCCCCAGCCTGAGGTGATCTT...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGTGCCACATCCACATTaGTGTCTGGTCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSVPHPH*CLVGCR
Trigger: CCTGCATCCGACCAGACATCAATGTGGATGTGGCAC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTGATGCAGACGTACAGTaGCCAGGCGCTCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIDADVQ*PGAHPF
Trigger: GAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATC...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR TCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCATCAGCACAGAGGTTaGGATGGCCTGAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAHQHRG*DGLRNP
Trigger: TGGATTCCTCAGGCCATCTCAACCTCTGTGCTGATG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTTTGGTGGATCTTGGCTaGTGTCCCACTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLVDLG*CPTLGL
Trigger: CAGTCCCAGAGTGGGACATCAGCCAAGATCCACCAA...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGCCACTGCCCTCCAGGTaGCAAACCACGGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVPLPSR*QTTVMG
Trigger: GCCCATGACCGTGGTTTGTCACCTGGAGGGCAGTGG...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGTTGTGCTGGAGGCCTTaGAGGGCTGCGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLCWRP*RAAAGS
Trigger: GCTTCCAGCCGCAGCCCTTCAAGGCCTCCAGCACAA...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGTTCAGTTCCTTCTCTaGGCTGGCTCCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSVQFLL*AGSHSS
Trigger: AGAGGAGTGGGAGCCAGCTCAGAGAAGGAACTGAAC...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCCCATCTAAAGGCCTaGCACTGCAGTGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVASHLKA*HCSEGH
Trigger: ATGCCCTTCACTGCAGTGTCAGGCCTTTAGATGGGA...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAAGTAGTGGCAGTTTGTaGCATGAACGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSSSGSL*HERANS
Trigger: GCTGTTTGCCCGTTCATGTCACAAACTGCCACTACT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAGGGTGTAGACCAGACTaGAAGGAGGCAGCATTCTCC +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPGCRPD*KEAAFS
Trigger: GGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACCC...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAGCCTGCCAAACGAACTaGACAGACAGTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAACQTN*TDSNCS
Trigger: AGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGC...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGTCGCTCCGCGAAGCTaGTCTCCAGCTGGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIVAPRS*SPAGAG
Trigger: GCCGGCGCCAGCTGGAGAGCAGCTTCGCGGAGCGAC...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCTCCTTGTACAGTTCTaGCCTGCTGAGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHLLVQF*PAELHW
Trigger: CCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCTCCTTGTACAGTTCTaGCCTGCTGAGCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCALLVQF*PAELHW
Trigger: CCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAAGGAGAAGCAAACACTaGCAAAGAGGGGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPRRSKH*QRGGPG
Trigger: CCCAGGACCCCCTCTTTGGCAGTGTTTGCTTCTCCT...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCCCCTGCAGGACTCTaGCCTCGGTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVSPAGL*PRYQAE
Trigger: CTCTGCCTGGTACCGAGGGCAGAGTCCTGCAGGGGA...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACATCCCCTGCAGGACTCTaGCCTCGGTACCAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTSPAGL*PRYQAE
Trigger: CTCTGCCTGGTACCGAGGGCAGAGTCCTGCAGGGGA...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTACAGCCGGTGGCACGCTaGCTGCAGGCGACTCAGTGG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVQPVAR*LQATQW
Trigger: CCACTGAGTCGCCTGCAGGCAGCGTGCCACCGGCTG...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTAGCCTCAGGCTGGTCTaGCTCTGGACCCAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACSLRLV*LWTQLK
Trigger: CTTGAGCTGGGTCCAGAGGCAGACCAGCCTGAGGCT...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR GCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGCAGCTCGGACCCGCTaGACGGCCTCAGCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVAARTR*TASASC
Trigger: ACAGGACGCTGAGGCCGTGCAGCGGGTCCGAGCTGC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGCTGGGTGCTGCTGCTaGAGTCCGTGCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFAGCCC*SPCRAL
Trigger: CAGTGCCCTGCACGGACTGCAGCAGCAGCACCCAGC...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGAGAAGGCTGGGTGCTaGTGCTGCAGTCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSEKAGC*CCSPCR
Trigger: CCTGCACGGACTGCAGCAGCAGCACCCAGCCTTCTC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAGGGCAGGGCTTCAGCTaGCAGGACCACAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTGQGFS*QDHKLL
Trigger: CAGCAGCTTGTGGTCCTGGCAGCTGAAGCCCTGCCC...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCCGGGGATCCATGAGCTaGTTCTCTAACATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACRGSMS*FSNMGR
Trigger: CCTGCCCATGTTAGAGAAGCAGCTCATGGATCCCCG...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR GCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTCGGGGATCCATGAGCTaGTTCTCTAACATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAARGSMS*FSNMGR
Trigger: CCTGCCCATGTTAGAGAAGCAGCTCATGGATCCCCG...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGAAAGTCCTCCAGGATTaGTTCAACATTGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLKVLQD*FNIGHH
Trigger: ATGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTT...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAAGAGGTCCAATGTCCTaGTGTCCGTCTACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVARGPMS*CPSTAC
Trigger: GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCT...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTGGGCCACCATGCCCCTaGCCCAATGCTGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPGPPCP*PNAGAS
Trigger: TGATGCTCCAGCATTGGGGCAGGGGCATGGTGGCCC...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTGCCCCCAGTGCTTTTTaGACCTCTCCAAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAAPSAF*TSPRLG
Trigger: ACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGC...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTACGGGTAGCCCCCAGTaGTTTTTGCACCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSTGSPQ*FLHLSK
Trigger: CTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCGT...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGGGGGTAGGAGGCTCTaGGCTACCATCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSGGRRL*ATIPCR
Trigger: CCTGCAGGGGATGGTAGCCCAGAGCCTCCTACCCCC...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCGGGCTGAACTCAGAATaGTTGACAGCAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSGLNSE*LTAAAN
Trigger: ATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCC...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCCCATCCTTCAGGCCCTaGGCTGAACTCAGAATGGTT +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVPSFRP*AELRMV
Trigger: AACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGG...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCCAGTAAACCCACCCTaGCCCTTGTCCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSPVNPP*PLSSSR
Trigger: GCGGGAGCTGGACAAGGGCCAGGGTGGGTTTACTGG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACGCACAGAGGTTGAGATaGCCTGAGGAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHAQRLR*PEESRK
Trigger: CTTCCTGGATTCCTCAGGCCATCTCAACCTCTGTGC...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCCCGGATCATGGGTTTaGGAGTCATCAACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHPGSWV*ESSTAG
Trigger: ACCTGCTGTTGATGACTCCCAAACCCATGATCCGGG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCCGGAGATGCAGGACATaGTCAAAAGCCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPRRCRT*SKARIM
Trigger: CATGATCCGGGCTTTTGACCATGTCCTGCATCTCCG...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCCAGCTCAAGGACGCTaGTCAGTCCCTCAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPPAQGR*SVPQAG
Trigger: TCCGGCCTGAGGGACTGACCAGCGTCCTTGAGCTGG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACGGGATCCCCAGAACTaGCGGAATTTAGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPRDPQN*RNLAAS
Trigger: TGAGGCTGCTAAATTCCGCCAGTTCTGGGGATCCCG...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACGTGGACACAGGTTTCTaGGATGTCAGCATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINVDTGF*DVSMEC
Trigger: GCACTCCATGCTGACATCCCAGAAACCTGTGTCCAC...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGTCTCTTTCAGGCCTTaGATAAGTGCATCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAVSFRP*ISASRG
Trigger: CCCCCTGGATGCACTTATCCAAGGCCTGAAAGAGAC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACGTCTCTTTCAGGCCTTaGATAAGTGCATCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHVSFRP*ISASRG
Trigger: CCCCCTGGATGCACTTATCCAAGGCCTGAAAGAGAC...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACTGGACGGACTGGAGTTaGTGGGAACACCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHWTDWS*WEHLCV
Trigger: TACACAGAGGTGTTCCCACCAACTCCAGTCCGTCCA...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCATAGAAGGAGAAGGCTaGACGGACTGGAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPIEGEG*TDWSWW
Trigger: CCACCAACTCCAGTCCGTCCAGCCTTCTCCTTCTAT...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCCGTGTGCGTGGCAGTaGCACGGCACTGCAGACCAT +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPPCAWQ*HGTADH
Trigger: ATGGTCTGCAGTGCCGTGCCACTGCCACGCACACGG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGGCACTGGTGAGCAGTaGCAACTGCCTTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSGTGEQ*QLPCVS
Trigger: AGAGACACAAGGCAGTTGCCACTGCTCACCAGTGCC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTACGGTGCCGCGGGATATaGCGAGGAGACAGGCGAATC +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALRCRGI*RGDRRI
Trigger: GATTCGCCTGTCTCCTCGCCATATCCCGCGGCACCG...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGGCGAGTCCACAGCCTaGCGGTGCCGCGGGATATGG +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTGESTA*RCRGIW
Trigger: CCATATCCCGCGGCACCGCCAGGCTGTGGACTCGCC...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTAGCTTGCTCCAGAGCTaGGATCACACAGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAASLLQS*DHTVHL
Trigger: GAGGTGGACTGTGTGATCCCAGCTCTGGAGCAAGCT...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTGGGCCACATTTTCGCTaGGTCCCATCTAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAAGPHFR*VPSKGL
Trigger: CAGGCCTTTAGATGGGACCCAGCGAAAATGTGGCCC...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTCCACTGTCTCCACCCTaGGAAGTGGCATCAACACAG +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSPLSPP*EVASTQ
Trigger: CTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGG...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCCCACTGTCTCCACCCTaGGAAGTGGCATCAACACAG +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACPLSPP*EVASTQ
Trigger: CTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGG...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCTCCTCCTTGGGCCCTaGGAGCTCCTGGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLLLGP*ELLGSK
Trigger: CTTACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGGCCATGCCTGGTCAGTaGGCTCTGTCTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVAMPGQ*ALSQGL
Trigger: CAGTCCCTGAGACAGAGCTCACTGACCAGGCATGGC...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAGCCATGCCTGGTCAGTaGGCTCTGTCTCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALAMPGQ*ALSQGL
Trigger: CAGTCCCTGAGACAGAGCTCACTGACCAGGCATGGC...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCCATCAGCACAGAGGTTaGGATGGCCTGAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACHQHRG*DGLRNP
Trigger: TGGATTCCTCAGGCCATCTCAACCTCTGTGCTGATG...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR TCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCTGCAGGATCTGGGCTaGGGGTCCATCCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPLQDLG*GSILCP
Trigger: TGGACACAGGATGGACCCTCAGCCCAGATCCTGCAG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACTGGAGGTCATCCTACTaGCATCTTGCTCTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHWRSSY*HLALEV
Trigger: GACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCA...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTTCCCATCTAAAGGCCTaGCACTGCAGTGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAASHLKA*HCSEGH
Trigger: ATGCCCTTCACTGCAGTGTCAGGCCTTTAGATGGGA...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACAGTAGTGGCAGTTTGTaGCATGAACGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINSSGSL*HERANS
Trigger: GCTGTTTGCCCGTTCATGTCACAAACTGCCACTACT...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGGGCACTATTTGAGCTaGGTCTGGAAAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAGHYLS*VWKNSQ
Trigger: CTGGCTGTTTTTCCAGACTCAGCTCAAATAGTGCCC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCGGGCACTATTTGAGCTaGGTCTGGAAAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVGHYLS*VWKNSQ
Trigger: CTGGCTGTTTTTCCAGACTCAGCTCAAATAGTGCCC...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCGCCTGCCAAACGAACTaGACAGACAGTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVACQTN*TDSNCS
Trigger: AGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGC...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTCCTGGGCATGGTCAGTaGCACATCCACATTGATGTC +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSPGHGQ*HIHIDV
Trigger: GACATCAATGTGGATGTGGCACTGACCATGCCCAGG...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTGGTAGAGGGCACGCTTaGGGAAGTAGCGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACGRGHA*GSSAGS
Trigger: TGAACCAGCGCTACTTCCGCAAGCGTGCCCTCTACC...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR GCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGGTTGACAGCAGCTaGAAATGGGACTCGAGAACT +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSMVDSS*KWDSRT
Trigger: AGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCAT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCTCAGTGGACGGAGATaGAGGACATGGTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLSGRR*RTWSKA
Trigger: GGCTTTTGACCATGTCCTGCATCTCCGTCCACTGAG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTTCCCCACCATTGTCCTaGAGCTCTGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACSPPLS*SSGQSF
Trigger: GAAGCTCTGGCCAGAGCTGCAGGACAATGGTGGGGA...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR GCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGGTGAAGGGCTCAGGGTaGAGGAAAAGGGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLVKGSG*RKRAAA
Trigger: GGCCGCTGCCCTTTTCCTGCACCCTGAGCCCTTCAC...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTCGGGCCTCCACAGTCTaGACCAGGCCTTCACCCAGC +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTRASTV*TRPSPS
Trigger: GCTGGGTGAAGGCCTGGTGCAGACTGTGGAGGCCCG...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTGCCCCCAGTGCTTTTTaGACCTCTCCAAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIAPSAF*TSPRLG
Trigger: ACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGC...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGGGGTCTCTCTGTTaGCCAGATTGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSMGSLC*PDWSRT
Trigger: AGTTCTAGACCAATCTGGGCAACAGAGAGACCCCAT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACCATGCGCCCCTTTGTaGTGGAGGCCTCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTPCAPL*WRPLSG
Trigger: GCCTGAAAGAGGCCTCCAGCACAAAGGGGCGCATGG...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353159.6
CDS-3UTR CCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTCAGGAGGCCCTTCGCTaGAGGTTCAGCCAATGTACG +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACQEALR*RFSQCT
Trigger: CGTACATTGGCTGAACCTCCAGCGAAGGGCCTCCTG...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGCACTCGAACCCCAGCTaGGAGCCATGCCTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVHSNPS*EPCLVS
Trigger: ACTGACCAGGCATGGCTCCCAGCTGGGGTTCGAGTG...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTATCCACATTGATGTCTaGTCGGATGCAGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSIHIDV*SDAGAQ
Trigger: CTGGGCACCTGCATCCGACCAGACATCAATGTGGAT...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAGGATTTCCCTGGGCATaGTCAGTGCCACATCCACAT +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPGFPWA*SVPHPH
Trigger: ATGTGGATGTGGCACTGACCATGCCCAGGGAAATCC...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTACGGAGAAGGCCTGGTaGAAGTCAGCCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTTEKAW*KSARAG
Trigger: GCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGT...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAACAACGGAGAAGGCCTaGTGGAAGTCAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTTTEKA*WKSARA
Trigger: GGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGT...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGCACAGAGGTTGAGATaGCCTGAGGAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSAQRLR*PEESRK
Trigger: CTTCCTGGATTCCTCAGGCCATCTCAACCTCTGTGC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACGGAGATGCAGGACATaGTCAAAAGCCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPRRCRT*SKARIM
Trigger: CATGATCCGGGCTTTTGACCATGTCCTGCATCTCCG...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCATGCTTTGGTGGATCTTaGCTGATGTCCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPCFGGS*LMSHSG
Trigger: CCCAGAGTGGGACATCAGCCAAGATCCACCAAAGCA...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACAAGGCTGGTCTGCCTCTaGACCCAGCTCAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTRLVCL*TQLKDA
Trigger: AGCGTCCTTGAGCTGGGTCCAGAGGCAGACCAGCCT...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGTTAGCAGCCTCAGGCTaGTCTGCCTCTGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLAASG*SASGPS
Trigger: GCTGGGTCCAGAGGCAGACCAGCCTGAGGCTGCTAA...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTGGAGTGCCAAGAGGTaGGTGACCACCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVWSAKR*VTTWWG
Trigger: TCCCCACCAGGTGGTCACCCACCTCTTGGCACTCCA...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCGAAGGAAGCCAACCTaGGGGGAACTCGGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFRRKPT*GELGGV
Trigger: CACCCCTCCGAGTTCCCCCCAGGTTGGCTTCCTTCG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAGAGTTTTTGCGGTCTTaGGGGGTAACAATGACCATG +
Preference number: 4 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAEFLRS*GVTMTM
Trigger: CATGGTCATTGTTACCCCCCAAGACCGCAAAAACTC...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCCTGCCCCAATGCTaGAGCATCAGAGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPPLPQC*SIREKV
Trigger: AACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGG...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCAGACTAAGAAAGGAGTaGGAAATCGCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPRLRKE*EIAGRS
Trigger: GGACCTCCCTGCGATTTCCCACTCCTTTCTTAGTCT...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCTCTGTTGCCCAGATTaGTCTAGAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCALCCPD*SRTPEL
Trigger: GAGCTCAGGAGTTCTAGACCAATCTGGGCAACAGAG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCACTCTGTTGCCCAGATTaGTCTAGAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVALCCPD*SRTPEL
Trigger: GAGCTCAGGAGTTCTAGACCAATCTGGGCAACAGAG...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAACGAAGGATGATGGCTaGCCGCAAGGAAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVATKDDG*PQGNFS
Trigger: TGAGAAGTTTCCTTGCGGCCAGCCATCATCCTTCGT...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR TCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTCCACTGCCCTCCAGGTaGCAAACCACGGTCATGGGC +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTPLPSR*QTTVMG
Trigger: GCCCATGACCGTGGTTTGTCACCTGGAGGGCAGTGG...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR TCA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCTTCCAATCAAACGTTaGTACCAAGAAAAGGAATCG +
Preference number: 4 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLLPIKR*YQEKES
Trigger: CGATTCCTTTTCTTGGTATCAACGTTTGATTGGAAG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAGTCCCCGGGGATCCATaGGCTGCTTCTCTAACATGG +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALVPGDP*AASLTW
Trigger: CCATGTTAGAGAAGCAGCTCATGGATCCCCGGGGAC...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGGGTTTTGTTGGAGATaGTTCAGCATGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAGFCWR*FSMFSQ
Trigger: CTGGCTGAACATGCTGAATCATCTCCAACAAAACCC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTTCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTT +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSSVSVM*LRRATF
Trigger: AAATGTGGCCCTTCTGAGTCACATCACCGACACTGA...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAGGGCACTATTTGAGCTaGGTCTGGAAAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPGHYLS*VWKNSQ
Trigger: CTGGCTGTTTTTCCAGACTCAGCTCAAATAGTGCCC...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGTCCCCTCTTTGCCTGTaGCTTCCAGGGCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSSPLCL*LPGLVP
Trigger: TGGAACCAGCCCTGGAAGGCACAGGCAAAGAGGGGA...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTCCCAGCTGGGAGCCATaGCTGGTCAGTGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSPSWEP*LVSELC
Trigger: ACAGAGCTCACTGACCAGGCATGGCTCCCAGCTGGG...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTACTGGGACATAGAGGCTaGCTCCCAGACCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALLGHRG*LPDHSF
Trigger: GAAGCTGTGGTCTGGGAGGCAGCCTCTATGTCCCAG...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTGCAGTGGCACGGCACTaGAGACCATGCTGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPAVARH*RPCCCV
Trigger: GACACAACAGCATGGTCTGCAGTGCCGTGCCACTGC...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTTAAGGACATCCGTGTaGGTGGCAGTGGCACGGCAC +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVLRTSV*VAVARH
Trigger: GTGCCGTGCCACTGCCACGCACACGGATGTCCTTAA...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTTGCTGCTGCAGTCCGTaGAGGGCACTGGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFCCCSP*RALVSS
Trigger: ACTGCTCACCAGTGCCCTGCACGGACTGCAGCAGCA...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTACCAGAGAAGGCTGGGTaGTGCTGCTGCAGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVPEKAG*CCCSPC
Trigger: GCACGGACTGCAGCAGCAGCACCCAGCCTTCTCTGG...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGCTGCGGATCTCCACCTaGTCCTCCACAGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVLRIST*SSTVSS
Trigger: TGAGCTCACTGTGGAGGAGCAGGTGGAGATCCGCAG...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGAGCTGTGCCCGAGCTaGCAGGAAGCCACTGCGGAT +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVELCPS*QEATAD
Trigger: ATCCGCAGTGGCTTCCTGGCAGCTCGGGCACAGCTC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACTCGAGACATCACCATaGGCCCCTTTGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTLETSP*APLCWR
Trigger: CCTCCAGCACAAAGGGGCGCATGGTGATGTCTCGAG...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGGGCCACCATGCCCCTaGCCCAATGCTGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVGPPCP*PNAGAS
Trigger: TGATGCTCCAGCATTGGGGCAGGGGCATGGTGGCCC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTCTACATGGGCCACCATaGCCCTGCCCCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSLHGPP*PCPNAG
Trigger: TCCAGCATTGGGGCAGGGGCATGGTGGCCCATGTAG...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTaGTCCTTCAATGTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQHRRAL*SFNVVY
Trigger: ATAGACCACATTGAAGGAGCACAATGCCCTCCTGTG...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTACGGGTAGCCCCCAGTaGTTTTTGCACCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACTGSPQ*FLHLSK
Trigger: CTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCGT...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTTATGCCACTGTGTGTaGCTGCCAAACGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPLCHCV*LPNELN
Trigger: GTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAA...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACATGGGGTCTCTCTGTTaGCCAGATTGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINMGSLC*PDWSRT
Trigger: AGTTCTAGACCAATCTGGGCAACAGAGAGACCCCAT...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACACATTGTTCTTGGTTaGCAGCAAGCGGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTHIVLG*QQAARA
Trigger: CGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTG...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGACAGCAGCTGCAAATaGGACTCGAGAACTGTATCT +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPDSSCK*DSRTVS
Trigger: AGATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACGGGCTGAACTCAGAATaGTTGACAGCAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHGLNSE*LTAAAN
Trigger: ATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCC...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCAAAAGCCCGGATCATaGGTTTGGGAGTCATCAACA +
Preference number: 4 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAQKPGS*VWESST
Trigger: TGTTGATGACTCCCAAACCCATGATCCGGGCTTTTG...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCACAAAAGCCCGGATCATaGGTTTGGGAGTCATCAACA +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAQKPGS*VWESST
Trigger: TGTTGATGACTCCCAAACCCATGATCCGGGCTTTTG...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGATTGTCCTGCAGCTCTaGCCAGAGCTTCAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVIVLQL*PELQPV
Trigger: CACCGGCTGAAGCTCTGGCCAGAGCTGCAGGACAAT...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACCTGCTCCAGGAGGGTaGTCAGGGGGCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIPAPGG*SGGPKQ
Trigger: CTGCTTTGGGCCCCCTGACCACCCTCCTGGAGCAGG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTAGGCTGGTCTGCCTCTaGACCCAGCTCAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSRLVCL*TQLKDA
Trigger: AGCGTCCTTGAGCTGGGTCCAGAGGCAGACCAGCCT...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGTTAGCAGCCTCAGGCTaGTCTGCCTCTGGACCCAGC +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLLAASG*SASGPS
Trigger: GCTGGGTCCAGAGGCAGACCAGCCTGAGGCTGCTAA...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACAGCTTCCCGAATaGCTCCGTCCTGGAAACGCC +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFPQLPE*LRPGNA
Trigger: GGCGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTGGGTGACCACCTGGTaGGGAATAAGGCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVWVTTW*GIRRFW
Trigger: CCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCA...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGGACATCCGTGTGCGTaGCAGTGGCACGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTGHPCA*QWHGTA
Trigger: TGCAGTGCCGTGCCACTGCCACGCACACGGATGTCC...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGGACATCCGTGTGCGTaGCAGTGGCACGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVGHPCA*QWHGTA
Trigger: TGCAGTGCCGTGCCACTGCCACGCACACGGATGTCC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCAGAAGGAGGCAGCTaGCGAGTCCACAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIAEGGS*RVHSLA
Trigger: CGCCAGGCTGTGGACTCGCCAGCTGCCTCCTTCTGC...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTAGCTTGCTCCAGAGCTaGGATCACACAGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACSLLQS*DHTVHL
Trigger: GAGGTGGACTGTGTGATCCCAGCTCTGGAGCAAGCT...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCATCAGAGAGAAAGTTaGGGCTGGGTTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHHQRES*GWVLLE
Trigger: CTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAGGGCTAATAGGTGGATaGATCTCCTGGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPGLIGG*ISWVQF
Trigger: GAACTGAACCCAGGAGATCCATCCACCTATTAGCCC...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGGGCTAATAGGTGGATaGATCTCCTGGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSGLIGG*ISWVQF
Trigger: GAACTGAACCCAGGAGATCCATCCACCTATTAGCCC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTGGGCTAATAGGTGGATaGATCTCCTGGGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAAGLIGG*ISWVQF
Trigger: GAACTGAACCCAGGAGATCCATCCACCTATTAGCCC...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTAGACTAAGAAAGGAGTaGGAAATCGCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSRLRKE*EIAGRS
Trigger: GGACCTCCCTGCGATTTCCCACTCCTTTCTTAGTCT...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCTCCACCCTGGGAAGTaGCATCAACACAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPLHPGK*HQHRRA
Trigger: TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTCTCCTCCTTGGGCCCTaGGAGCTCCTGGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTLLLGP*ELLGSK
Trigger: CTTACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAG...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTGCCTCTTTCAGGCCTTaGATAAGTGCATCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACASFRP*ISASRG
Trigger: CCCCCTGGATGCACTTATCCAAGGCCTGAAAGAGGC...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353159.6
CDS-3UTR TCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGTCACAACCCGCTGGTTaGCCTCCCGTAGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLSQPAG*PPVGRH
Trigger: ATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGA...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAGTGCCACATCCACATTaGTGTCTGGTCGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALVPHPH*CLVGCR
Trigger: CCTGCATCCGACCAGACATCAATGTGGATGTGGCAC...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTCCTCTTCTGGGATGGTaGGGCCCAGGAGACTACATG +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSPLLGW*GPGDYM
Trigger: CATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGG...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGACTGCTCAGTGTCGGTaGTGTGACTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVTAQCR*CDSEGP
Trigger: TGGCCCTTCTGAGTCACATCACCGACACTGAGCAGT...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTAGGAGGGGCACTATTTaGGCTGAGTCTGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSRRGTI*AESGKT
Trigger: TGTTTTTCCAGACTCAGCTCAAATAGTGCCCCTCCT...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTTTGTGTCAACAGCTCTaGCAGGCGCAGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSLCQQL*QAQLEG
Trigger: GCCTTCCAGCTGCGCCTGGCAGAGCTGTTGACACAA...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTTGCTGCTGCAGTCCGTaGAGGGCACTGGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTCCCSP*RALVSS
Trigger: ACTGCTCACCAGTGCCCTGCACGGACTGCAGCAGCA...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGGGCAGGGCTTCAGCTaGCAGGACCACAAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIGQGFS*QDHKLL
Trigger: CAGCAGCTTGTGGTCCTGGCAGCTGAAGCCCTGCCC...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTCACAGGAGGGCATTGTaGTCCTTCAATGTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAAHRRAL*SFNVVY
Trigger: ATAGACCACATTGAAGGAGCACAATGCCCTCCTGTG...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCACACAGGAGGGCATTGTaGTCCTTCAATGTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPHRRAL*SFNVVY
Trigger: ATAGACCACATTGAAGGAGCACAATGCCCTCCTGTG...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGACGGGTAGCCCCCAGTaGTTTTTGCACCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVTGSPQ*FLHLSK
Trigger: CTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCGT...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTTTATGCCACTGTGTGTaGCTGCCAAACGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAALCHCV*LPNELN
Trigger: GTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAA...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTACCCTCACAACCCGCTaGTTGACCTCCCGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSTLTTR*LTSRRK
Trigger: CTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGT...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGGCTGGGAGCCATGCCTaGTCAGTGAGCTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLAGSHA*SVSSVS
Trigger: TGAGACAGAGCTCACTGACCAGGCATGGCTCCCAGC...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGAACAGTAACCTGGGCTaGGGGCAGGAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSNSNLG*GQEAET
Trigger: TGTTTCCGCTTCCTGCCCCCAGCCCAGGTTACTGTT...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCACATTGTTCTTGGTTaGCAGCAAGCGGCACGGGCG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFHIVLG*QQAARA
Trigger: CGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAAGCGCACATTGTTCTTaGTTGGCAGCAAGCGGCACG +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALSAHCS*LAASGT
Trigger: CGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCT...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACTCATGGTGGTATaGATCTTGCGTGTAGACACA +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSPLMVV*ILRVDT
Trigger: TGTGTCTACACGCAAGATCCATACCACCATGAGTGG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTCGGAGATGCAGGACATaGTCAAAAGCCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: GASERKLGLGFVGDDSACRRCRT*SKARIM
Trigger: CATGATCCGGGCTTTTGACCATGTCCTGCATCTCCG...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCAGAGTCTTTGTGCTTTaGTGGATCTTGGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPRVFVL*WILADV
Trigger: GACATCAGCCAAGATCCACCAAAGCACAAAGACTCT...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTCGAATGGCTCCGTCCTaGAAACGCCGAAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTRMAPS*KRRSSE
Trigger: CTCGGAGCTTCGGCGTTTCCAGGACGGAGCCATTCG...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTTGGAGTGCCAAGAGGTaGGTGACCACCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTWSAKR*VTTWWG
Trigger: TCCCCACCAGGTGGTCACCCACCTCTTGGCACTCCA...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCCTCCTCACCTGTGCTaGAGGTCTCTTTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSPPHLC*RSLSGL
Trigger: AAGGCCTGAAAGAGACCTCCAGCACAGGTGAGGAGG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGGCACTGGTGAGCAGTaGCAACTGCCTTGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSGTGEQ*QLPCVS
Trigger: AGAGACACAAGGCAGTTGCCACTGCTCACCAGTGCC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTGAGTTTTTGCGGTCTTaGGGGGTAACAATGACCATG +
Preference number: 4 (lower is better)
Translates to: IVVAVCDMNGQTARADAAEFLRS*GVTMTM
Trigger: CATGGTCATTGTTACCCCCCAAGACCGCAAAAACTC...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCCAGCAGGCCCTCCATaGAGGATTCATGTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSPAGPP*RIHVQG
Trigger: TCCTTGGACATGAATCCTCCATGGAGGGCCTGCTGG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAAGAGAAAGTTGGGGCTaGGTTTTGTTGGAGATGATT +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSRESWG*VLLEMI
Trigger: AATCATCTCCAACAAAACCCAGCCCCAACTTTCTCT...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCATCAGAGAGAAAGTTaGGGCTGGGTTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSHQRES*GWVLLE
Trigger: CTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACCCCTTCTCTGTTTCTaGAAGAAGACTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSPLLCF*KKTKKG
Trigger: TCCTTTCTTAGTCTTCTTCCAGAAACAGAGAAGGGG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGGATGCAGACGTACAGTaGCCAGGCGCTCATCCTTTC +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLDADVQ*PGAHPF
Trigger: GAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATC...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACCCCAAAGGCCTCCCTaGGCTGCGTCAGATAGAGCT +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIPQRPP*AASDRA
Trigger: AGCTCTATCTGACGCAGCTCAGGGAGGCCTTTGGGG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGTTCAGTTCCTTCTCTaGGCTGGCTCCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFVQFLL*AGSHSS
Trigger: AGAGGAGTGGGAGCCAGCTCAGAGAAGGAACTGAAC...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTCCCATCTAAAGGCCTaGCACTGCAGTGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPSHLKA*HCSEGH
Trigger: ATGCCCTTCACTGCAGTGTCAGGCCTTTAGATGGGA...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTTGGCAGTTTGTGACATaGACGGGCAAACAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFWQFVT*TGKQPG
Trigger: CCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCA...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCCTGGGCATGGTCAGTaGCACATCCACATTGATGTC +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSPGHGQ*HIHIDV
Trigger: GACATCAATGTGGATGTGGCACTGACCATGCCCAGG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATCATAGACAGCCGTaGCTCATGCTGTACCTGGTG +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTHHRQP*LMLYLV
Trigger: CACCAGGTACAGCATGAGGCACGGCTGTCTATGATG...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCTCAGTGGACGGAGATaGAGGACATGGTCAAAAGCC +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLSGRR*RTWSKA
Trigger: GGCTTTTGACCATGTCCTGCATCTCCGTCCACTGAG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCAGTGGCACGGCACTaGAGACCATGCTGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTAVARH*RPCCCV
Trigger: GACACAACAGCATGGTCTGCAGTGCCGTGCCACTGC...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAGTGAGCAGTGGCAACTaGCTTGTGTCTCTCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTVSSGN*LVSLSR
Trigger: CCTTGAGAGAGACACAAGGCAGTTGCCACTGCTCAC...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTAAAGTCCTCCAGGATTaGTTCAACATTGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSKVLQD*FNIGHH
Trigger: ATGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTT...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTGTCCGTCTACAGCTTaGTCCAGAGCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPCPSTA*SRAGIT
Trigger: TGTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACA...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACATGTCCGTCTACAGCTTaGTCCAGAGCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTCPSTA*SRAGIT
Trigger: TGTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACA...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSILLTS*SRGPMS
Trigger: GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGAT...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCCTGTAGGATTTCCCTaGGCATGGTCAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPPVGFP*AWSVPH
Trigger: ATGTGGCACTGACCATGCCCAGGGAAATCCTACAGG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTACCATCCTTCAGGCCCTaGGCTGAACTCAGAATGGTT +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALPSFRP*AELRMV
Trigger: AACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGG...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACCATCCTTCAGGCCCTaGGCTGAACTCAGAATGGTT +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTPSFRP*AELRMV
Trigger: AACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGG...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCCTGGTAGCCACTCATaGTGGTATGGATCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSPGSHS*WYGSCV
Trigger: CACGCAAGATCCATACCACCATGAGTGGCTACCAGG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTCTGCAGGCGACTCAGTaGACGGAGATGCAGGACATG +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTLQATQ*TEMQDM
Trigger: CATGTCCTGCATCTCCGTCCACTGAGTCGCCTGCAG...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTGCTTTGGTGGATCTTaGCTGATGTCCCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVCFGGS*LMSHSG
Trigger: CCCAGAGTGGGACATCAGCCAAGATCCACCAAAGCA...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCAGAGTCTTTGTGCTTTaGTGGATCTTGGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACRVFVL*WILADV
Trigger: GACATCAGCCAAGATCCACCAAAGCACAAAGACTCT...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACGAATGGCTCCGTCCTaGAAACGCCGAAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIRMAPS*KRRSSE
Trigger: CTCGGAGCTTCGGCGTTTCCAGGACGGAGCCATTCG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGGTGGACACAGGTTTCTaGGATGTCAGCATGGAGTGC +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVVDTGF*DVSMEC
Trigger: GCACTCCATGCTGACATCCCAGAAACCTGTGTCCAC...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTATAGAAGGAGAAGGCTaGACGGACTGGAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPIEGEG*TDWSWW
Trigger: CCACCAACTCCAGTCCGTCCAGCCTTCTCCTTCTAT...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGACAAACCACGGTCATaGGCTCCACGTAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIDKPRS*APRRPD
Trigger: GTCCGGCCTACGTGGAGCCCATGACCGTGGTTTGTC...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCCCCTGCCCCAATGCTaGAGCATCAGAGAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPPLPQC*SIREKV
Trigger: AACTTTCTCTCTGATGCTCCAGCATTGGGGCAGGGG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGTTCCTTCTCTGAGCTaGCTCCCACTCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFVPSLS*LPLLFW
Trigger: CCAGAAGAGGAGTGGGAGCCAGCTCAGAGAAGGAAC...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCACCCCTTCTCTGTTTCTaGAAGAAGACTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAPLLCF*KKTKKG
Trigger: TCCTTTCTTAGTCTTCTTCCAGAAACAGAGAAGGGG...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTAAGATCACCTCAGGCTaGGGGCGAGGGATGGGCTTA +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTKITSG*GRGMGL
Trigger: TAAGCCCATCCCTCGCCCCCAGCCTGAGGTGATCTT...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCATCAGCACAGAGGTTaGGATGGCCTGAGGAATCCA +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFHQHRG*DGLRNP
Trigger: TGGATTCCTCAGGCCATCTCAACCTCTGTGCTGATG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTATTGGTGGATCTTGGCTaGTGTCCCACTCTGGGACTG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVLVDLG*CPTLGL
Trigger: CAGTCCCAGAGTGGGACATCAGCCAAGATCCACCAA...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCCTTCCAATCAAACGTTaGTACCAAGAAAAGGAATCG +
Preference number: 4 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPLPIKR*YQEKES
Trigger: CGATTCCTTTTCTTGGTATCAACGTTTGATTGGAAG...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGTTCAGTTCCTTCTCTaGGCTGGCTCCCACTCCTCT +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTVQFLL*AGSHSS
Trigger: AGAGGAGTGGGAGCCAGCTCAGAGAAGGAACTGAAC...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTT +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPSVSVM*LRRATF
Trigger: AAATGTGGCCCTTCTGAGTCACATCACCGACACTGA...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCAGTGTCGGTaGTGTGACTCAGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVTAQCR*CDSEGP
Trigger: TGGCCCTTCTGAGTCACATCACCGACACTGAGCAGT...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTATGGCAGTTTGTGACATaGACGGGCAAACAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVWQFVT*TGKQPG
Trigger: CCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCA...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAAGTAGTGGCAGTTTGTaGCATGAACGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALSSGSL*HERANS
Trigger: GCTGTTTGCCCGTTCATGTCACAAACTGCCACTACT...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACAGGGCACTATTTGAGCTaGGTCTGGAAAAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTGHYLS*VWKNSQ
Trigger: CTGGCTGTTTTTCCAGACTCAGCTCAAATAGTGCCC...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGGCCTGCCAAACGAACTaGACAGACAGTAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVACQTN*TDSNCS
Trigger: AGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGC...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCTGGGCATGGTCAGTaGCACATCCACATTGATGTC +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFPGHGQ*HIHIDV
Trigger: GACATCAATGTGGATGTGGCACTGACCATGCCCAGG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCATCATAGACAGCCGTaGCTCATGCTGTACCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLHHRQP*LMLYLV
Trigger: CACCAGGTACAGCATGAGGCACGGCTGTCTATGATG...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATATCCCCACCATTGTCCTaGAGCTCTGGCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHISPPLS*SSGQSF
Trigger: GAAGCTCTGGCCAGAGCTGCAGGACAATGGTGGGGA...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGTCCCAGAGTCTTTGTaGTTTGGTGGATCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSVPESL*FGGSWL
Trigger: CAGCCAAGATCCACCAAAGCACAAAGACTCTGGGAC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAGTCCCAGAGTCTTTGTaGTTTGGTGGATCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALVPESL*FGGSWL
Trigger: CAGCCAAGATCCACCAAAGCACAAAGACTCTGGGAC...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTCGGCACTGCAGACCATaGTGTTGTGTCAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSRHCRP*CCVNSS
Trigger: AGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCG...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCGGCACTGCAGACCATaGTGTTGTGTCAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFRHCRP*CCVNSS
Trigger: AGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAAGGACCACAAGCTGCTaGAGGATCTGGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIRTTSC*RIWAEG
Trigger: ACCCTCAGCCCAGATCCTGCAGCAGCTTGTGGTCCT...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACAGGAGGCCCTTCGCTaGAGGTTCAGCCAATGTACG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIQEALR*RFSQCT
Trigger: CGTACATTGGCTGAACCTCCAGCGAAGGGCCTCCTG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTAACAGTAACCTGGGCTaGGGGCAGGAAGCGGAAACA +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTNSNLG*GQEAET
Trigger: TGTTTCCGCTTCCTGCCCCCAGCCCAGGTTACTGTT...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGTCATCAACAGCAGGTaGAACCCGTCGTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVVINSR*NPSSAL
Trigger: CAGAGCTGACGACGGGTTCCACCTGCTGTTGATGAC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCCCGGATCATGGGTTTaGGAGTCATCAACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLPGSWV*ESSTAG
Trigger: ACCTGCTGTTGATGACTCCCAAACCCATGATCCGGG...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGAGACTAAGAAAGGAGTaGGAAATCGCAGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVRLRKE*EIAGRS
Trigger: GGACCTCCCTGCGATTTCCCACTCCTTTCTTAGTCT...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGGGCCACATTTTCGCTaGGTCCCATCTAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVGPHFR*VPSKGL
Trigger: CAGGCCTTTAGATGGGACCCAGCGAAAATGTGGCCC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCTCTGTTGCCCAGATTaGTCTAGAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPLCCPD*SRTPEL
Trigger: GAGCTCAGGAGTTCTAGACCAATCTGGGCAACAGAG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTTGGAGGTCATCCTACTaGCATCTTGCTCTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFWRSSY*HLALEV
Trigger: GACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCA...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTTCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTT +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFSVSVM*LRRATF
Trigger: AAATGTGGCCCTTCTGAGTCACATCACCGACACTGA...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTAGTAGTGGCAGTTTGTaGCATGAACGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSSSGSL*HERANS
Trigger: GCTGTTTGCCCGTTCATGTCACAAACTGCCACTACT...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGATGGTTGACAGCAGCTaGAAATGGGACTCGAGAACT +
Preference number: 4 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSMVDSS*KWDSRT
Trigger: AGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCAT...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTCATCATAGACAGCCGTaGCTCATGCTGTACCTGGTG +
Preference number: 4 (lower is better)
Translates to: IEFMPLCVPAKRTEQTVTHHRQP*LMLYLV
Trigger: CACCAGGTACAGCATGAGGCACGGCTGTCTATGATG...AGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACGGGGATCCATGAGCTaGTTCTCTAACATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIRGSMS*FSNMGR
Trigger: CCTGCCCATGTTAGAGAAGCAGCTCATGGATCCCCG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGCCCCCAGTGCTTTTTaGACCTCTCCAAGATTGGGT +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVAPSAF*TSPRLG
Trigger: ACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATTATGCCACTGTGTGTaGCTGCCAAACGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTLCHCV*LPNELN
Trigger: GTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAA...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp AGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACAATGGGGTCTCTCTGTTaGCCAGATTGGTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: SGINTGGHCAPSMWSIHTMGSLC*PDWSRT
Trigger: AGTTCTAGACCAATCTGGGCAACAGAGAGACCCCAT...TGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGGATTTCCCTGGGCATaGTCAGTGCCACATCCACAT +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVGFPWA*SVPHPH
Trigger: ATGTGGATGTGGCACTGACCATGCCCAGGGAAATCC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGGACAGCAGCTGCAAATaGGACTCGAGAACTGTATCT +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVDSSCK*DSRTVS
Trigger: AGATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTC...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGCCACTCATGGTGGTATaGATCTTGCGTGTAGACACA +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVPLMVV*ILRVDT
Trigger: TGTGTCTACACGCAAGATCCATACCACCATGAGTGG...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACACCACTCATGGTGGTATaGATCTTGCGTGTAGACACA +
Preference number: 4 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTPLMVV*ILRVDT
Trigger: TGTGTCTACACGCAAGATCCATACCACCATGAGTGG...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGCACAGAGGTTGAGATaGCCTGAGGAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVAQRLR*PEESRK
Trigger: CTTCCTGGATTCCTCAGGCCATCTCAACCTCTGTGC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAACGGACTGGAGTTGGTaGGAACACCTCTGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHITDWSW*EHLCVA
Trigger: CGCTACACAGAGGTGTTCCCACCAACTCCAGTCCGT...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTCTCTGTTGCCCAGATTaGTCTAGAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSLCCPD*SRTPEL
Trigger: GAGCTCAGGAGTTCTAGACCAATCTGGGCAACAGAG...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGGGTTTTGTTGGAGATaGTTCAGCATGTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFGFCWR*FSMFSQ
Trigger: CTGGCTGAACATGCTGAATCATCTCCAACAAAACCC...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTATCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTT +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVSVSVM*LRRATF
Trigger: AAATGTGGCCCTTCTGAGTCACATCACCGACACTGA...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGAGGAGGGGCACTATTTaGGCTGAGTCTGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLRRGTI*AESGKT
Trigger: TGTTTTTCCAGACTCAGCTCAAATAGTGCCCCTCCT...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR TCA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTAGGAGGGGCACTATTTaGGCTGAGTCTGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFRRGTI*AESGKT
Trigger: TGTTTTTCCAGACTCAGCTCAAATAGTGCCCCTCCT...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGAAAGTCCTCCAGGATTaGTTCAACATTGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVKVLQD*FNIGHH
Trigger: ATGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTT...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATATGTCCGTCTACAGCTTaGTCCAGAGCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHICPSTA*SRAGIT
Trigger: TGTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACA...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALILLTS*SRGPMS
Trigger: GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGAT...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGTTATGCCACTGTGTGTaGCTGCCAAACGAACTGAAC +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLLCHCV*LPNELN
Trigger: GTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAA...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTCAAAAGCCCGGATCATaGGTTTGGGAGTCATCAACA +
Preference number: 4 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSQKPGS*VWESST
Trigger: TGTTGATGACTCCCAAACCCATGATCCGGGCTTTTG...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR TCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATATGGAGGTCATCCTACTaGCATCTTGCTCTAGAGGTC +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIWRSSY*HLALEV
Trigger: GACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCA...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAAGGAGGGGCACTATTTaGGCTGAGTCTGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVRRGTI*AESGKT
Trigger: TGTTTTTCCAGACTCAGCTCAAATAGTGCCCCTCCT...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR GCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGATCCTACTGACATCTTaGTCTAGAGGTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLILLTS*SRGPMS
Trigger: GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGAT...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGACAGCAGCTGCAAATaGGACTCGAGAACTGTATCT +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVDSSCK*DSRTVS
Trigger: AGATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTAGAGAAAGTTGGGGCTaGGTTTTGTTGGAGATGATT +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPRESWG*VLLEMI
Trigger: AATCATCTCCAACAAAACCCAGCCCCAACTTTCTCT...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CCA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCCCCTTCTCTGTTTCTaGAAGAAGACTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPPLLCF*KKTKKG
Trigger: TCCTTTCTTAGTCTTCTTCCAGAAACAGAGAAGGGG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR GCA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACACAGGAGGGCATTGTaGTCCTTCAATGTGGTCTAT +
Preference number: 4 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIHRRAL*SFNVVY
Trigger: ATAGACCACATTGAAGGAGCACAATGCCCTCCTGTG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CCA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGAGAGAAAGTTGGGGCTaGGTTTTGTTGGAGATGATT +
Preference number: 4 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLRESWG*VLLEMI
Trigger: AATCATCTCCAACAAAACCCAGCCCCAACTTTCTCT...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR TCA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTACTTCCAATCAAACGTTaGTACCAAGAAAAGGAATCG +
Preference number: 4 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVLPIKR*YQEKES
Trigger: CGATTCCTTTTCTTGGTATCAACGTTTGATTGGAAG...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS TCA 90 bp GATCATAGCCCAGCACGGGCATCAGGGATGAGGGCCCCGGCTGGCTaGGCAGGCCCCGGCAGAAGGAGGCAGCTGGCGAGTCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: DHSPARASGMRAPAG*AGPGRRRQLASPQP
Trigger: AGGCTGTGGACTCGCCAGCTGCCTCCTTCTGCCGGGGCCTGCTCAGCCAGCCGGGGCCCTCATCCCTGATGCCCGTGCTGGGCTATGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS CCA 90 bp CTGAGCAGGCCCCGGCAGAAGGAGGCAGCTGGCGAGTCCACAGCCTaGCGGTGCCGCGGGATATGGCGAGGAGACAGGCGAATCAGCACG +
Preference number: 5 (lower is better)
Translates to: LSRPRQKEAAGESTA*RCRGIWRGDRRIST
Trigger: CGTGCTGATTCGCCTGTCTCCTCGCCATATCCCGCGGCACCGCCAGGCTGTGGACTCGCCAGCTGCCTCCTTCTGCCGGGGCCTGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS CCA 90 bp CAGCTGGAAGGCAGCTCGGACCCGCTGCACGGCCTCAGCGTCCTGTaGCCACTGGCCACTGCCCTCCAGGTGACAAACCACGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: QLEGSSDPLHGLSVL*PLATALQVTNHGHG
Trigger: CCCATGACCGTGGTTTGTCACCTGGAGGGCAGTGGCCAGTGGCCACAGGACGCTGAGGCCGTGCAGCGGGTCCGAGCTGCCTTCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 90 bp GGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGGCGCTCATCCTTTCCACGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: GSKRHGRKKSGGGHG*RRTVTRRSSFPRGR
Trigger: GCGGCCGCGTGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS GCA 90 bp GGCAGTGGCACGGCACTGCAGACCATGCTGTTGTGTCAACAGCTCTaGCAGGCGCAGCTGGAAGGCAGCTCGGACCCGCTGCACGGCCTC +
Preference number: 5 (lower is better)
Translates to: GSGTALQTMLLCQQL*QAQLEGSSDPLHGL
Trigger: GAGGCCGTGCAGCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCGTGCCACTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 90 bp CATCACCTCTGGCTCTCCAGTCGCTCCGCGAAGCTGCTCTCCAGCTaGCGCCGGCCCCATCACTCAGGGTCCAGCACTCTCCCGCACTTC +
Preference number: 5 (lower is better)
Translates to: HHLWLSSRSAKLLSS*RRPHHSGSSTLPHF
Trigger: GAAGTGCGGGAGAGTGCTGGACCCTGAGTGATGGGGCCGGCGCCAGCTGGAGAGCAGCTTCGCGGAGCGACTGGAGAGCCAGAGGTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS TCA 90 bp GGGCTCCACGTAGGCCGGACAGGGCTTATCGAGCCGGGGCAGCAGTaGGGACCGCTCCCGCAGAGTCTCATAGAAGGAGAAGGCTGGACG +
Preference number: 5 (lower is better)
Translates to: GLHVGRTGLIEPGQQ*GPLPQSLIEGEGWT
Trigger: CGTCCAGCCTTCTCCTTCTATGAGACTCTGCGGGAGCGGTCCTCACTGCTGCCCCGGCTCGATAAGCCCTGTCCGGCCTACGTGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 90 bp CACTGCAGACCATGCTGTTGTGTCAACAGCTCTGCCAGGCGCAGCTaGAAGGCAGCTCGGACCCGCTGCACGGCCTCAGCGTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: HCRPCCCVNSSARRS*KAARTRCTASASCG
Trigger: GCCACAGGACGCTGAGGCCGTGCAGCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS TCA 90 bp CAGACACGGTCAGTGGGAGACCCTCTAGCCCCCACAGTAGGCGACTaGGGTCGTCGTAGCAACGTACCGCCGCTACCAGGGCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QTRSVGDPLAPTVGD*GRRSNVPPLPGPPH
Trigger: GTGAGGAGGCCCTGGTAGCGGCGGTACGTTGCTACGACGACCTCAGTCGCCTACTGTGGGGGCTAGAGGGTCTCCCACTGACCGTGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 90 bp AAGGCGGAGGGAGGCAGCTGTGTCCCTCAGCGAGATCATCCCCTCTaGGCTCTGCACCTCCTTCAGGATCTGGGGCTCCCGCTGATAGGC +
Preference number: 5 (lower is better)
Translates to: KAEGGSCVPQRDHPL*ALHLLQDLGLPLIG
Trigger: GCCTATCAGCGGGAGCCCCAGATCCTGAAGGAGGTGCAGAGCCCAGAGGGGATGATCTCGCTGAGGGACACAGCTGCCTCCCTCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 90 bp CATCAGCGAAACCCTCACCAAGAAGCTGGGCACGCACCCACCGCTTaGCCAGCCGTGCCACACCAGAGAAGGCTGGGTGCTGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: HQRNPHQEAGHAPTA*PAVPHQRRLGAAAA
Trigger: TGCAGCAGCAGCACCCAGCCTTCTCTGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGGTTTCGCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 90 bp TGCTGCTGCTGCAGTCCGTGCAGGGCACTGGTGAGCAGTGGCAACTaGCTTGTGTCTCTCTCAAGGCGGAGGGAGGCAGCTGTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: CCCCSPCRALVSSGN*LVSLSRRREAAVSL
Trigger: GAGGGACACAGCTGCCTCCCTCCGCCTTGAGAGAGACACAAGGCAGTTGCCACTGCTCACCAGTGCCCTGCACGGACTGCAGCAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 90 bp GGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGGCGCTCATCCTTTCCTGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: GSKRHGRKKSGGGHG*RRTVTRRSSFPARD
Trigger: GTCTCTGGCAGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 90 bp AGGACTCTGCCCTCGGTACCAGGCAGAGCGCACATTGTTCTTGGTTaGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTGGAGGGCACGG +
Preference number: 5 (lower is better)
Translates to: RTLPSVPGRAHIVLG*QQAARAEEVRWRAR
Trigger: CCGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGCAGAGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 90 bp CTGCAGGACTCTGCCCTCGGTACCAGGCAGAGCGCACATTGTTCTTaGTTGGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: LQDSALGTRQSAHCS*LAASGTGGRSQVEG
Trigger: GCCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGCAGAGTCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 90 bp GCCACCAGATCCAGGCTCTCATCAGCGAAACCCTCACCAAGAAGCTaGGCACGCACCCACCGCTTGGCCAGCCGTGCCACACCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: ATRSRLSSAKPSPRS*ARTHRLASRATPEK
Trigger: CTTCTCTGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGGTTTCGCTGATGAGAGCCTGGATCTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 90 bp CCTGGGCCAGGTGGTGAGCCAAGTGGGCCAGGTAGAGGGCACGCTTaGGGAAGTAGCGCTGGTTCAGCCCGTCCTTGTCCTGTAGGATTT +
Preference number: 5 (lower is better)
Translates to: PGPGGEPSGPGRGHA*GSSAGSARPCPVGF
Trigger: AAATCCTACAGGACAAGGACGGGCTGAACCAGCGCTACTTCCGCAAGCGTGCCCTCTACCTGGCCCACTTGGCTCACCACCTGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS GCA 90 bp TTGTCCTGCAGCTCTGGCCAGAGCTTCAGCCGGTGGCACGCTGCCTaGAGGCGACTCAGTGGACGGAGATGCAGGACATGGTCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: LSCSSGQSFSRWHAA*RRLSGRRCRTWSKA
Trigger: GGCTTTTGACCATGTCCTGCATCTCCGTCCACTGAGTCGCCTGCAGGCAGCGTGCCACCGGCTGAAGCTCTGGCCAGAGCTGCAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 90 bp ATAGAGGCTGCCTCCCAGACCACAGCTTCCCGAATGGCTCCGTCCTaGAAACGCCGAAGCTCCGAGCGGGATCCCCAGAACTGGCGGAAT +
Preference number: 5 (lower is better)
Translates to: IEAASQTTASRMAPS*KRRSSERDPQNWRN
Trigger: ATTCCGCCAGTTCTGGGGATCCCGCTCGGAGCTTCGGCGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGGTCTGGGAGGCAGCCTCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS TCA 90 bp ACAGTGACCAGGCGCTCATCCTTTCCTGCCAGAGACAGTGAGTGCTaGGACTCTGCAGGAGCCCTTGGAGCCAGAGGGCTCCCCATCCTG +
Preference number: 5 (lower is better)
Translates to: TVTRRSSFPARDSEC*DSAGALGARGLPIL
Trigger: CAGGATGGGGAGCCCTCTGGCTCCAAGGGCTCCTGCAGAGTCTCAGCACTCACTGTCTCTGGCAGGAAAGGATGAGCGCCTGGTCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS TCA 90 bp CAGACGTACAGTGACCAGGCGCTCATCCTTTCCTGCCAGAGACAGTaGGTGCTGAGACTCTGCAGGAGCCCTTGGAGCCAGAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: QTYSDQALILSCQRQ*VLRLCRSPWSQRAP
Trigger: GGGAGCCCTCTGGCTCCAAGGGCTCCTGCAGAGTCTCAGCACTCACTGTCTCTGGCAGGAAAGGATGAGCGCCTGGTCACTGTACGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS GCA 90 bp GGTGACCACCTGGTGGGGAATAAGGCGCTTCTGGGACATAGAGGCTaGCTCCCAGACCACAGCTTCCCGAATGGCTCCGTCCTGGAAACG +
Preference number: 5 (lower is better)
Translates to: GDHLVGNKALLGHRG*LPDHSFPNGSVLET
Trigger: CGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGGTCTGGGAGGCAGCCTCTATGTCCCAGAAGCGCCTTATTCCCCACCAGGTGGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS GCA 90 bp AGGCCTCCGTGCCTCTGTGCCTTCTCCTCCAGATTTACCATCCCATaGTATGCCCTCAGCCCAATGTGTGCCTCTCACCACGCGGCCGCA +
Preference number: 5 (lower is better)
Translates to: RPPCLCAFSSRFTIP*YALSPMCASHHAAA
Trigger: TGCGGCCGCGTGGTGAGAGGCACACATTGGGCTGAGGGCATAGCATGGGATGGTAAATCTGGAGGAGAAGGCACAGAGGCACGGAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 90 bp GATGCAGGTGCCCAGAAGGTAGCTGCCCACAACAGTAACCTGGGCTaGGGGCAGGAAGCGGAAACAGCCCTTCACGGCATAGGGCACTTG +
Preference number: 5 (lower is better)
Translates to: DAGAQKVAAHNSNLG*GQEAETALHGIGHL
Trigger: CAAGTGCCCTATGCCGTGAAGGGCTGTTTCCGCTTCCTGCCCCCAGCCCAGGTTACTGTTGTGGGCAGCTACCTTCTGGGCACCTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS-3UTR CAA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGCACGCACCCACCGCTaGGCCAGCCGTGCCACACCA +
Preference number: 5 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPARTHR*ASRATP
Trigger: TGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTTTTGTGCTGGAGGCCTaGAAGGGCTGCGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: RLKGGSILLLGPWELLGSFVLEA*KGCGWK
Trigger: CTTCCAGCCGCAGCCCTTCAAGGCCTCCAGCACAAA...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS TCA 90 bp ACGGGCGGAAGAAGTCAGGTGGAGGGCACGGATGCAGACGTACAGTaGCCAGGCGCTCATCCTTTCCTGCCAGAGACAGTGAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TGGRSQVEGTDADVQ*PGAHPFLPETVSAE
Trigger: CTCAGCACTCACTGTCTCTGGCAGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS GCA 90 bp TCCGTGCCTCTGTGCCTTCTCCTCCAGATTTACCATCCCATGCTATaGCCTCAGCCCAATGTGTGCCTCTCACCACGCGGCCGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SVPLCLLLQIYHPML*PQPNVCLSPRGRSN
Trigger: GTTGCTGCGGCCGCGTGGTGAGAGGCACACATTGGGCTGAGGGCATAGCATGGGATGGTAAATCTGGAGGAGAAGGCACAGAGGCACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 90 bp AGAATCCAGGGCCCAGCCACATATCCCCAGGCTTCTCTCAGGCTATaGAGCTCAGACCCCCTGGTGTGGATTGGCAGGGCAGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: RIQGPATYPQASLRL*SSDPLVWIGRAGHL
Trigger: AAGATGCCCTGCCCTGCCAATCCACACCAGGGGGTCTGAGCTCCATAGCCTGAGAGAAGCCTGGGGATATGTGGCTGGGCCCTGGATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR CAA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTGCTTTCTTCCCCTCTTaGCCTGTGCCTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RLKGGSILLLGPWELLGSAFFPS*PVPSRA
Trigger: AGCCCTGGAAGGCACAGGCAAAGAGGGGAAGAAAGC...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGCTCACAACCCGCTGGTaGACCTCCCGTAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLLTTRW*TSRRKA
Trigger: TGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAG...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CAA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTGCACATTGTTCTTGGTaGGCAGCAAGCGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: GVDQTERRQHSPPWALGAAHCSW*AASGTG
Trigger: GCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGC...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCTGCACCTCTCCAAGATaGGGTGACTACCAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPCTSPR*GDYQSP
Trigger: AGGGGACTGGTAGTCACCCAATCTTGGAGAGGTGCA...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS GCA 90 bp GTGAGGGTTTCAGGTGGCAGCCATTTGTGTAGGAGAAGCAAACACTaGCAAAGAGGGGGTCCTGGGCCAGGTGGTGAGCCAAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: VRVSGGSHLCRRSKH*QRGGPGPGGEPSGP
Trigger: TGGCCCACTTGGCTCACCACCTGGCCCAGGACCCCCTCTTTGGCAGTGTTTGCTTCTCCTACACAAATGGCTGCCACCTGAAACCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS GCA 90 bp AATCCATCCTTAAGGACATCCGTGTGCGTGGCAGTGGCACGGCACTaGAGACCATGCTGTTGTGTCAACAGCTCTGCCAGGCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NPSLRTSVCVAVARH*RPCCCVNSSARRSW
Trigger: CCAGCTGCGCCTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCGTGCCACTGCCACGCACACGGATGTCCTTAAGGATGGATT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 90 bp AGCTGGGATCACACAGTCCACCTCTCACTTCGGGCCTCCACAGTCTaGACCAGGCCTTCACCCAGCACAGCAAAGTCCTCCAGGATTGCT +
Preference number: 5 (lower is better)
Translates to: SWDHTVHLSLRASTV*TRPSPSTAKSSRIA
Trigger: AGCAATCCTGGAGGACTTTGCTGTGCTGGGTGAAGGCCTGGTGCAGACTGTGGAGGCCCGAAGTGAGAGGTGGACTGTGTGATCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS CCA 90 bp ATTGTTCTTGGTTGGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTaGAGGGCACGGATGCAGACGTACAGTGACCAGGCGCTCATCCTT +
Preference number: 5 (lower is better)
Translates to: IVLGWQQAARAEEVR*RARMQTYSDQALIL
Trigger: AAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 90 bp TGCCGCAGCCAGACCTTCAGAAGTGCCACGCCATCCTTCAGGCCCTaGGCTGAACTCAGAATGGTTGACAGCAGCTGCAAATGGGACTCG +
Preference number: 5 (lower is better)
Translates to: CRSQTFRSATPSFRP*AELRMVDSSCKWDS
Trigger: CGAGTCCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGGCGTGGCACTTCTGAAGGTCTGGCTGCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS-3UTR CAA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCACACGGCATAGGGCACTaGGTGGAGGGGCACTCGAAC +
Preference number: 5 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSHGIGH*VEGHSN
Trigger: GTTCGAGTGCCCCTCCACCAAGTGCCCTATGCCGTG...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGCTGGACGGACTGGAGTaGGTGGGAACACCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLLDGLE*VGTPLC
Trigger: ACACAGAGGTGTTCCCACCAACTCCAGTCCGTCCAG...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTGCAGCATTCTCCTCCTaGGGCCCTGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FSTVSTLGSGINTGGHCAAAFSS*GPGSSW
Trigger: CCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGC...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS TCA 90 bp CCCTCAGCCCAATGTGTGCCTCTCACCACGCGGCCGCAGCAACAGTaGGGGTTTCAGGTGGCAGCCATTTGTGTAGGAGAAGCAAACACT +
Preference number: 5 (lower is better)
Translates to: PSAQCVPLTTRPQQQ*GFQVAAICVGEANT
Trigger: AGTGTTTGCTTCTCCTACACAAATGGCTGCCACCTGAAACCCTCACTGTTGCTGCGGCCGCGTGGTGAGAGGCACACATTGGGCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS GCA 90 bp GAGGCCCTTCGCTGGAGGTTCAGCCAATGTACGCTTCCTGGAGGATaGTTTCTTCCCCTCTTTGCCTGTGCCTTCCAGGGCTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: EALRWRFSQCTLPGG*FLPLFACAFQGWFH
Trigger: ATGGAACCAGCCCTGGAAGGCACAGGCAAAGAGGGGAAGAAAGCATCCTCCAGGAAGCGTACATTGGCTGAACCTCCAGCGAAGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS GCA 90 bp TTGGTAGGCTCCTTGTACAGTTCTGCCCTGCTGAGCTTCACTGGCTaGAGGAGGCCCTTCGCTGGAGGTTCAGCCAATGTACGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LVGSLYSSALLSFTG*RRPFAGGSANVRFL
Trigger: CAGGAAGCGTACATTGGCTGAACCTCCAGCGAAGGGCCTCCTGCAGCCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAGCCTACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS GCA 90 bp GGCCTCTATCCCCTAAACCCTGGACCTTACCCTGGGCATGGTCAGTaGCACATCCACATTGATGTCTGGTCGGATGCAGGTGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GLYPLNPGPYPGHGQ*HIHIDVWSDAGAQK
Trigger: CTTCTGGGCACCTGCATCCGACCAGACATCAATGTGGATGTGGCACTGACCATGCCCAGGGTAAGGTCCAGGGTTTAGGGGATAGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 90 bp AGGTTGAGATGGCCTGAGGAATCCAGGAAGACAACGGAGAAGGCCTaGTGGAAGTCAGCCAGGGCCGGCAAAGAGGGATCTGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: RLRWPEESRKTTEKA*WKSARAGKEGSELR
Trigger: TCTCAGCTCAGATCCCTCTTTGCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGTCTTCCTGGATTCCTCAGGCCATCTCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACGGGCAAACAGCCAGGGCAGATGCAGCTAACGGGTAGCCCCCAGTGCTTTTTGTGCACCTCTCCAAGATaGGGTGACTACCAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: TGKQPGQMQLTGSPQCFLCTSPR*GDYQSP
Trigger: AGGGGACTGGTAGTCACCCAATCTTGGAGAGGTGCA...CAAAAAGCACTGGGGGCTACCCGTTAGCTGCATCTGCCCTGGCTGTTTGCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS TCA 90 bp GACTCTCTGTCTCAGGGACTGAGGGCACCCTCACAACCCGCTGGTTaGCCTCCCGTAGGAAGGCATCAATCCGATCCTTCTTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: DSLSQGLRAPSQPAG*PPVGRHQSDPSSSL
Trigger: CAGAGAAGAAGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496319.2
CDS CCA 90 bp CTCATTGGTAGGCTCCTTGTACAGTTCTGCCCTGCTGAGCTTCACTaGCTGCAGGAGGCCCTTCGCTGGAGGTTCAGCCAATGTACGCTT +
Preference number: 5 (lower is better)
Translates to: LIGRLLVQFCPAELH*LQEALRWRFSQCTL
Trigger: AAGCGTACATTGGCTGAACCTCCAGCGAAGGGCCTCCTGCAGCCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAGCCTACCAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS CCA 90 bp TCAGTGAGCTCTGTCTCAGGGACTGAGGGCACCCTCACAACCCGCTaGTTGACCTCCCGTAGGAAGGCATCAATCCGATCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SVSSVSGTEGTLTTR*LTSRRKASIRSFFF
Trigger: GAAGAAGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAGCTCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 90 bp GACTCAGTGGACGGAGATGCAGGACATGGTCAAAAGCCCGGATCATaGGTTTGGGAGTCATCAACAGCAGGTGGAACCCGTCGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: DSVDGDAGHGQKPGS*VWESSTAGGTRRQL
Trigger: GAGCTGACGACGGGTTCCACCTGCTGTTGATGACTCCCAAACCCATGATCCGGGCTTTTGACCATGTCCTGCATCTCCGTCCACTGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 90 bp GGACCTTACCCTGGGCATGGTCAGTGCCACATCCACATTGATGTCTaGTCGGATGCAGGTGCCCAGAAGGTAGCTGCCCACAACAGTAAC +
Preference number: 5 (lower is better)
Translates to: GPYPGHGQCHIHIDV*SDAGAQKVAAHNSN
Trigger: GTTACTGTTGTGGGCAGCTACCTTCTGGGCACCTGCATCCGACCAGACATCAATGTGGATGTGGCACTGACCATGCCCAGGGTAAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 90 bp GCAAGACTCTCTGTCTCAGGGACTGAGGGCACCCTCACAACCCGCTaGTTGACCTCCCGTAGGAAGGCATCAATCCGATCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ARLSVSGTEGTLTTR*LTSRRKASIRSFFF
Trigger: GAAGAAGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAGAGTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496319.2
CDS-3UTR CAA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCCGATTAAGCTCCTCATaGGTAGGCTCCTTGTACAGT +
Preference number: 5 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPRLSSS*VGSLYS
Trigger: ACTGTACAAGGAGCCTACCAATGAGGAGCTTAATCG...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CAA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACACGGCATAGGGCACTaGGTGGAGGGGCACTCGAAC +
Preference number: 5 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPHGIGH*VEGHSN
Trigger: GTTCGAGTGCCCCTCCACCAAGTGCCCTATGCCGTG...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAAGCACATTGTTCTTGGTaGGCAGCAAGCGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQAHCSW*AASGTG
Trigger: GCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGC...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGCCCGGATCATGGGTTaGGGAGTCATCAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSARIMG*GVINSR
Trigger: CCTGCTGTTGATGACTCCCAAACCCATGATCCGGGC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCGTGCTTTGGTGGATCTaGGCTGATGTCCCACTCTGG +
Preference number: 5 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSVLWWI*ADVPLW
Trigger: CCAGAGTGGGACATCAGCCAAGATCCACCAAAGCAC...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCCTGCAGACCATGCTGTaGTGTCAACAGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSLQTML*CQQLCQ
Trigger: CTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAG...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACTGTCCGTCTACAGCTaGCTCCAGAGCTGGGATCAC +
Preference number: 5 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRALSVYS*LQSWDH
Trigger: GTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACAG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp CACTCCTCTTCTGGGATGGTGAGGCCCAGGAGACTACATGGGCCACCATGCCCCAGTTGGGGCTGGGTTTaGTTGGAGATGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: HSSSGMVRPRRLHGPPCPSWGWV*LEMIQH
Trigger: ATGCTGAATCATCTCCAACAAAACCCAGCCCCAACT...GGGGCATGGTGGCCCATGTAGTCTCCTGGGCCTCACCATCCCAGAAGAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS GCA 90 bp ACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTaGTCCAGAGCTGGGATCACACAGTCCACCTCTCACTTCGGGCCT +
Preference number: 5 (lower is better)
Translates to: TSCSRGPMSCCPSTA*SRAGITQSTSHFGP
Trigger: AGGCCCGAAGTGAGAGGTGGACTGTGTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS GCA 90 bp GTGTGGATTGGCAGGGCAGGGCATCTTAGAACCCCTTCTGCCACTTaGTCAACCACCCATTCCCATGTAGACTTAGGGTGCAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: VWIGRAGHLRTPSAT*STTHSHVDLGCSTK
Trigger: CTTCGTGCTGCACCCTAAGTCTACATGGGAATGGGTGGTTGAGCAAGTGGCAGAAGGGGTTCTAAGATGCCCTGCCCTGCCAATCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR CAA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCGCTTTCTTCCCCTCTTaGCCTGTGCCTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPAFFPS*PVPSRA
Trigger: AGCCCTGGAAGGCACAGGCAAAGAGGGGAAGAAAGC...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCTCACAACCCGCTGGTaGACCTCCCGTAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLTTRW*TSRRKA
Trigger: TGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTCTCACAACCCGCTGGTaGACCTCCCGTAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSLTTRW*TSRRKA
Trigger: TGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAG...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTGCACATTGTTCTTGGTaGGCAGCAAGCGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSAHCSW*AASGTG
Trigger: GCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGC...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAAGAGCGCACATTGTTCTaGGTTGGCAGCAAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQERTLF*VGSKRH
Trigger: GTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTC...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp AGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCCTGGGGAGTCATAAACTGATCCCGTaGACTGTCAGGTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: RLKGGSILLLGPWELLGSHKLIP*TVRSVV
Trigger: CACTACAGACCTGACAGTCAACGGGATCAGTTTATG...ACTCCCCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGGTCTCTTTCAGGCCTaGGATAAGTGCATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSGLFQA*DKCIQG
Trigger: CCCCTGGATGCACTTATCCAAGGCCTGAAAGAGACC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp CAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCAGCAGTGGCAACTGCCTaGTGTCTCTCTCAAGGCGGA +
Preference number: 5 (lower is better)
Translates to: QSFPVLGSFPLSPPWEVAAVATA*CLSQGG
Trigger: TCCGCCTTGAGAGAGACACAAGGCAGTTGCCACTGC...TGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACCTGTCCGTCTACAGCTaGCTCCAGAGCTGGGATCAC +
Preference number: 5 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHLSVYS*LQSWDH
Trigger: GTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACAG...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATGCACCTCTCCAAGATaGGGTGACTACCAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRACTSPR*GDYQSP
Trigger: AGGGGACTGGTAGTCACCCAATCTTGGAGAGGTGCA...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS TCA 90 bp GTGGTAAGTAGAGGCAGTGACATCAGCACAGAGGTTGAGATGGCCTaGGGAATCCAGGAAGACAACGGAGAAGGCCTGGTGGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: VVSRGSDISTEVEMA*GIQEDNGEGLVEVS
Trigger: GCTGACTTCCACCAGGCCTTCTCCGTTGTCTTCCTGGATTCCTCAGGCCATCTCAACCTCTGTGCTGATGTCACTGCCTCTACTTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGAGCGCACATTGTTCTaGGTTGGCAGCAAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: YPILSCPRFFSTVSTLGSERTLF*VGSKRH
Trigger: GTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTC...ACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAGCCCGGATCATGGGTTaGGGAGTCATCAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPARIMG*GVINSR
Trigger: CCTGCTGTTGATGACTCCCAAACCCATGATCCGGGC...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGCACGCACCCACCGCTaGGCCAGCCGTGCCACACCA +
Preference number: 5 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVARTHR*ASRATP
Trigger: TGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp CTACTGACATCTTGCTCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTGCCTGTCCGTCTACAGCTaGCTCCAGAGCTGGGATCAC +
Preference number: 5 (lower is better)
Translates to: LLTSCSRGPMSCCPSTACLSVYS*LQSWDH
Trigger: GTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACAG...GCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGAGCAAGATGTCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCACAACACAGGAGGGCATaGTGCTCCTTCAATGTGGTC +
Preference number: 5 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAQHRRA*CSFNVV
Trigger: GACCACATTGAAGGAGCACAATGCCCTCCTGTGTTG...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGCAGCATTCTCCTCCTaGGGCCCTGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSAAFSS*GPGSSW
Trigger: CCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAGCAGCATTCTCCTCCTaGGGCCCTGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTAAFSS*GPGSSW
Trigger: CCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGC...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTGGCCTCTTTCAGGCCTaGGATAAGTGCATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHIGLFQA*DKCIQG
Trigger: CCCCTGGATGCACTTATCCAAGGCCTGAAAGAGGCC...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353159.6
CDS-3UTR CAA 90 bp TATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTGACTCAGAAGGGCCACATTTCACCATGCGCCCCTTaGTGCTGGAGGCCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: YSPFPLLSVGDVTQKGHISPCAP*CWRPLS
Trigger: TGAAAGAGGCCTCCAGCACAAAGGGGCGCATGGTGA...AATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353159.6
CDS CCA 90 bp TCAGAAGTGCCACGCCATCCTTCAGGCCCTGGGCTGAACTCAGAATaGTTGACAGCAGCTGCAAATGGGACTCGAGAACTGTATCTTGCA +
Preference number: 5 (lower is better)
Translates to: SEVPRHPSGPGLNSE*LTAAANGTRELYLA
Trigger: TGCAAGATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGGCGTGGCACTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 90 bp CCCAGTTCTCATATCTGGAGAGCAAAGCTCCAAAAGGACAGCAACTaGCCCGAGGGATCTAAGCTGCCTTCAGGATGCCTGCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: PSSHIWRAKLQKDSN*PEGSKLPSGCLQWS
Trigger: AGACCATTGCAGGCATCCTGAAGGCAGCTTAGATCCCTCGGGCCAGTTGCTGTCCTTTTGGAGCTTTGCTCTCCAGATATGAGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS-3UTR CAA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATCAGGTGGCAGCCATTaGTGTAGGAGAAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRASGGSH*CRRSKH
Trigger: GTGTTTGCTTCTCCTACACAAATGGCTGCCACCTGA...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp GGTGTAGACCAGACTGAAAGGAGGCAGCATTCTCCTCCTTGGGCCCTGGGAGCTCTCGAGAACTGTATCTaGCAGGACCCATGTGTTATA +
Preference number: 5 (lower is better)
Translates to: GVDQTERRQHSPPWALGALENCI*QDPCVI
Trigger: TATAACACATGGGTCCTGCAAGATACAGTTCTCGAG...AGCTCCCAGGGCCCAAGGAGGAGAATGCTGCCTCCTTTCAGTCTGGTCTACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACACATCAGCACAGAGGTaGAGATGGCCTGAGGAATCC +
Preference number: 5 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHTSAQR*RWPEES
Trigger: GGATTCCTCAGGCCATCTCAACCTCTGTGCTGATGT...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACAGGGTCCCAGAGTCTTaGTGCTTTGGTGGATCTTGG +
Preference number: 5 (lower is better)
Translates to: LSCPRFFSTVSTLGSGINRVPES*CFGGSW
Trigger: CCAAGATCCACCAAAGCACAAAGACTCTGGGACCCT...GTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTGGTCTCTTTCAGGCCTaGGATAAGTGCATCCAGGGG +
Preference number: 5 (lower is better)
Translates to: IVVAVCDMNGQTARADAAGLFQA*DKCIQG
Trigger: CCCCTGGATGCACTTATCCAAGGCCTGAAAGAGACC...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCTGCAGACCATGCTGTaGTGTCAACAGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSLQTML*CQQLCQ
Trigger: CTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp ACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTCCTTCAGCATCAGAGAGAAAGTaGGGGCTGGGTTTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: TVSTLGSGINTGGHCAPSASERK*GLGFVG
Trigger: TCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGC...TGAAGGAGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCCAACACAGGAGGGCATaGTGCTCCTTCAATGTGGTC +
Preference number: 5 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSQHRRA*CSFNVV
Trigger: GACCACATTGAAGGAGCACAATGCCCTCCTGTGTTG...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp CCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACAACACAGGAGGGCATaGTGCTCCTTCAATGTGGTC +
Preference number: 5 (lower is better)
Translates to: PFLSSVLFHCLHPGKWHQQHRRA*CSFNVV
Trigger: GACCACATTGAAGGAGCACAATGCCCTCCTGTGTTG...TTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAAGCCCCCAGTGCTTTTaGCACCTCTCCAAGATTGGG +
Preference number: 5 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPSPQCF*HLSKIG
Trigger: CCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCT...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp ACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCAAGCCCCCAGTGCTTTTaGCACCTCTCCAAGATTGGG +
Preference number: 5 (lower is better)
Translates to: TPSPTQSFPVLGSFPLSPSPQCF*HLSKIG
Trigger: CCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCT...TGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGCAGCATTCTCCTCCTaGGGCCCTGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFAAFSS*GPGSSW
Trigger: CCAGGAGCTCCCAGGGCCCAAGGAGGAGAATGCTGC...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS GCA 90 bp CCATCCTTCAGGCCCTGGGCTGAACTCAGAATGGTTGACAGCAGCTaGAAATGGGACTCGAGAACTGTATCTTGCAGGACCCATGTGTTA +
Preference number: 5 (lower is better)
Translates to: PSFRPWAELRMVDSS*KWDSRTVSCRTHVL
Trigger: TAACACATGGGTCCTGCAAGATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS-3UTR CAA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCACGGCATAGGGCACTaGGTGGAGGGGCACTCGAAC +
Preference number: 5 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLHGIGH*VEGHSN
Trigger: GTTCGAGTGCCCCTCCACCAAGTGCCCTATGCCGTG...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAATGTCCTCAGGTGGCAGCCATTaGTGTAGGAGAAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: PRRVEVILLTSCSRGPMSSGGSH*CRRSKH
Trigger: GTGTTTGCTTCTCCTACACAAATGGCTGCCACCTGA...GGACATTGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CAA 90 bp TCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCAATGGTGGTATGGATCTaGCGTGTAGACACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SVLFHCLHPGKWHQHRRAMVVWI*RVDTRK
Trigger: CTTCCTTGTGTCTACACGCAAGATCCATACCACCAT...TGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTACATCAGCACAGAGGTaGAGATGGCCTGAGGAATCC +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSTSAQR*RWPEES
Trigger: GGATTCCTCAGGCCATCTCAACCTCTGTGCTGATGT...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTTGTGCTGGAGGCCTaGAAGGGCTGCGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPFVLEA*KGCGWK
Trigger: CTTCCAGCCGCAGCCCTTCAAGGCCTCCAGCACAAA...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS-3UTR CAA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCCAAAGTCCTCCAGGATaGCTTCAACATTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVQSPPG*LQHWAP
Trigger: TGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTTG...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACGCATCAGAGAGAAAGTaGGGGCTGGGTTTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: FLSSVLFHCLHPGKWHQHASERK*GLGFVG
Trigger: TCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGC...GTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS TCA 90 bp ATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGTGATGTaGCTCAGAAGGGCCACATTTTCGCTGGGTCCCATCCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: IHTHIAPFHCSVSVM*LRRATFSLGPILMS
Trigger: GGACATCAGGATGGGACCCAGCGAAAATGTGGCCCTTCTGAGTCACATCACCGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379471.3
CDS-3UTR CAA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTTCAGGTGGCAGCCATTaGTGTAGGAGAAGCAAACAC +
Preference number: 5 (lower is better)
Translates to: IVVAVCDMNGQTARADAASGGSH*CRRSKH
Trigger: GTGTTTGCTTCTCCTACACAAATGGCTGCCACCTGA...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ATAGTAGTGGCAGTTTGTGACATGAACGGGCAAACAGCCAGGGCAGATGCAGCTCTGAACTCAGAATGGTaGACAGCAGCTGCAAATGGG +
Preference number: 5 (lower is better)
Translates to: IVVAVCDMNGQTARADAALNSEW*TAAANG
Trigger: CCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAG...AGCTGCATCTGCCCTGGCTGTTTGCCCGTTCATGTCACAAACTGCCACTACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGCAGTGGCAACTGCCTaGTGTCTCTCTCAAGGCGGA +
Preference number: 5 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSAVATA*CLSQGG
Trigger: TCCGCCTTGAGAGAGACACAAGGCAGTTGCCACTGC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTACAGTGAGCTCATTATaGAGGTTGACAAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: FSTVSTLGSGINTGGHCATVSSL*RLTKRG
Trigger: CCCCCTCTTTGTCAACCTCAATAATGAGCTCACTGT...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCACAGTGAGCTCATTATaGAGGTTGACAAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVTVSSL*RLTKRG
Trigger: CCCCCTCTTTGTCAACCTCAATAATGAGCTCACTGT...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCCACCCAGGATTGCTTCAACATaGGGCACCATTACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSPTQSFPVLGSFPLSPPRIAST*GTITSS
Trigger: GGAGCTAGTAATGGTGCCCAATGTTGAAGCAATCCT...GGGTGGAGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCAAAGTCCTCCAGGATaGCTTCAACATTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSQSPPG*LQHWAP
Trigger: TGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTTG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TTTTCCACTGTCTCCACCCTGGGAAGTGGCATCAACACAGGAGGGCATTGTGCTAGTTGGGGCTGGGTTTaGTTGGAGATGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: FSTVSTLGSGINTGGHCASWGWV*LEMIQH
Trigger: ATGCTGAATCATCTCCAACAAAACCCAGCCCCAACT...AGCACAATGCCCTCCTGTGTTGATGCCACTTCCCAGGGTGGAGACAGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAGCATCAGAGAGAAAGTaGGGGCTGGGTTTTGTTGGA +
Preference number: 5 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPASERK*GLGFVG
Trigger: TCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGC...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TGGGAAATCGCAGGGAGGTCCAGGCCCAGGGCTAATAGGTGGATGGATCTCCTGTGTTCAAACATGTTCTaGCCCTCAAGGAGTTTACAT +
Preference number: 5 (lower is better)
Translates to: WEIAGRSRPRANRWMDLLCSNMF*PSRSLH
Trigger: ATGTAAACTCCTTGAGGGCAAGAACATGTTTGAACA...CAGGAGATCCATCCACCTATTAGCCCTGGGCCTGGACCTCCCTGCGATTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000297990.9
CDS-3UTR CAA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGGAGCGCACATTGTTCTaGGTTGGCAGCAAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLERTLF*VGSKRH
Trigger: GTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTC...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTCATAAACTGATCCCGTaGACTGTCAGGTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSHKLIP*TVRSVV
Trigger: CACTACAGACCTGACAGTCAACGGGATCAGTTTATG...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGGTGCTTTGGTGGATCTaGGCTGATGTCCCACTCTGG +
Preference number: 5 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSVLWWI*ADVPLW
Trigger: CCAGAGTGGGACATCAGCCAAGATCCACCAAAGCAC...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCTGGACGGACTGGAGTaGGTGGGAACACCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFLDGLE*VGTPLC
Trigger: ACACAGAGGTGTTCCCACCAACTCCAGTCCGTCCAG...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS-3UTR CAA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCAAGGATTGCTTCAACATaGGGCACCATTACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPRIAST*GTITSS
Trigger: GGAGCTAGTAATGGTGCCCAATGTTGAAGCAATCCT...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp CTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTTGGGGCTGGGTTTTGTaGGAGATGATTCAGCATGTT +
Preference number: 5 (lower is better)
Translates to: LTPSPTQSFPVLGSFPLSWGWVL*EMIQHV
Trigger: AACATGCTGAATCATCTCCAACAAAACCCAGCCCCA...AGACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTAGCCCCCAGTGCTTTTaGCACCTCTCCAAGATTGGG +
Preference number: 5 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPSPQCF*HLSKIG
Trigger: CCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCT...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS TCA 90 bp GCCTTCAGGATGCCTGCAATGGTCTGCTCTTCTGATTTAGAATTCTaGCTTCAATCCCCTGGCAAGCGGCAGATAAGAAAGAGGGATCCA +
Preference number: 5 (lower is better)
Translates to: AFRMPAMVCSSDLEF*LQSPGKRQIRKRDP
Trigger: TGGATCCCTCTTTCTTATCTGCCGCTTGCCAGGGGATTGAAGTCAGAATTCTAAATCAGAAGAGCAGACCATTGCAGGCATCCTGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS TCA 90 bp AGGGATCTAAGCTGCCTTCAGGATGCCTGCAATGGTCTGCTCTTCTaGTTTAGAATTCTGACTTCAATCCCCTGGCAAGCGGCAGATAAG +
Preference number: 5 (lower is better)
Translates to: RDLSCLQDACNGLLF*FRILTSIPWQAADK
Trigger: CTTATCTGCCGCTTGCCAGGGGATTGAAGTCAGAATTCTAAATCAGAAGAGCAGACCATTGCAGGCATCCTGAAGGCAGCTTAGATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 90 bp CAATCAAACGTTGATACCAAGAAAAGGAATCGAAGGAAGCCAACCTaGGGGGAACTAAAGGGCTGGAGTAAGCAAAGAATCCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: QSNVDTKKRNRRKPT*GELKGWSKQRIQGP
Trigger: TGGGCCCTGGATTCTTTGCTTACTCCAGCCCTTTAGTTCCCCCCAGGTTGGCTTCCTTCGATTCCTTTTCTTGGTATCAACGTTTGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS-3UTR CAA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAAGTGCCACATCCACATaGATGTCTGGTCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTSATST*MSGRMQ
Trigger: CTGCATCCGACCAGACATCAATGTGGATGTGGCACT...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTAGTGCCACATCCACATaGATGTCTGGTCGGATGCAG +
Preference number: 5 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPSATST*MSGRMQ
Trigger: CTGCATCCGACCAGACATCAATGTGGATGTGGCACT...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TCATGTCCAAGGAGGGTGGAGGTCATCCTACTGACATCTTGCTCTAGAGGTCCACTCGAGAACTGTATCTaGCAGGACCCATGTGTTATA +
Preference number: 5 (lower is better)
Translates to: SCPRRVEVILLTSCSRGPLENCI*QDPCVI
Trigger: TATAACACATGGGTCCTGCAAGATACAGTTCTCGAG...TGGACCTCTAGAGCAAGATGTCAGTAGGATGACCTCCACCCTCCTTGGACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CAA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAACATCAGCACAGAGGTaGAGATGGCCTGAGGAATCC +
Preference number: 5 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALTSAQR*RWPEES
Trigger: GGATTCCTCAGGCCATCTCAACCTCTGTGCTGATGT...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAGCCCGGATCATGGGTTaGGGAGTCATCAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVARIMG*GVINSR
Trigger: CCTGCTGTTGATGACTCCCAAACCCATGATCCGGGC...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGTGCTTTGGTGGATCTaGGCTGATGTCCCACTCTGG +
Preference number: 5 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFVLWWI*ADVPLW
Trigger: CCAGAGTGGGACATCAGCCAAGATCCACCAAAGCAC...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGAGGGTCCCAGAGTCTTaGTGCTTTGGTGGATCTTGG +
Preference number: 5 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVRVPES*CFGGSW
Trigger: CCAAGATCCACCAAAGCACAAAGACTCTGGGACCCT...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CGGGTAGCCCCCAGTGCTTTTTGCACCTCTCCAAGATTGGGTGACTACCAGTCCTCTTCCAATCAAACGTaGATACCAAGAAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: RVAPSAFCTSPRLGDYQSSSNQT*IPRKGI
Trigger: GATTCCTTTTCTTGGTATCAACGTTTGATTGGAAGA...GGACTGGTAGTCACCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCTACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTGACCCCTTCACCTACCCAATCCTTTCCTGTCCTCGGTTCTTTTCCACTGTCTTGACAAAGAGGGGGTaGTTCTTCCAATCAAACGTT +
Preference number: 5 (lower is better)
Translates to: PDPFTYPILSCPRFFSTVLTKRG*FFQSNV
Trigger: AACGTTTGATTGGAAGAACAACCCCCTCTTTGTCAA...GACAGTGGAAAAGAACCGAGGACAGGAAAGGATTGGGTAGGTGAAGGGGTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGCAACACAGGAGGGCATaGTGCTCCTTCAATGTGGTC +
Preference number: 5 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSQHRRA*CSFNVV
Trigger: GACCACATTGAAGGAGCACAATGCCCTCCTGTGTTG...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp GCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGAGCCCCCAGTGCTTTTaGCACCTCTCCAAGATTGGG +
Preference number: 5 (lower is better)
Translates to: ALCSFNVVYSYTYSPFPLSPQCF*HLSKIG
Trigger: CCCAATCTTGGAGAGGTGCAAAAAGCACTGGGGGCT...CAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS TCA 90 bp GCGCTGAGCCGAAAATTCCTTGAGTTAAGAGCTCTCCTGTCTACCTaGCACCACAAGCATGGAGCTCTGTTTGGAATTGGTAGTGATAGA +
Preference number: 5 (lower is better)
Translates to: ALSRKFLELRALLST*HHKHGALFGIGSDR
Trigger: TCTATCACTACCAATTCCAAACAGAGCTCCATGCTTGTGGTGTCAGGTAGACAGGAGAGCTCTTAACTCAAGGAATTTTCGGCTCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496319.2
CDS-3UTR CAA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCTTTCTTCCCCTCTTaGCCTGTGCCTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIAFFPS*PVPSRA
Trigger: AGCCCTGGAAGGCACAGGCAAAGAGGGGAAGAAAGC...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTACTGAACTCAGAATGGTaGACAGCAGCTGCAAATGGG +
Preference number: 5 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALLNSEW*TAAANG
Trigger: CCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAG...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGCTGAACTCAGAATGGTaGACAGCAGCTGCAAATGGG +
Preference number: 5 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVLNSEW*TAAANG
Trigger: CCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAG...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTCATAAACTGATCCCGTaGACTGTCAGGTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: GASERKLGLGFVGDDSACHKLIP*TVRSVV
Trigger: CACTACAGACCTGACAGTCAACGGGATCAGTTTATG...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000353159.6
CDS-3UTR CAA 90 bp GGAGCATCAGAGAGAAAGTTGGGGCTGGGTTTTGTTGGAGATGATTCAGCATGTTGGGGCTGGGTTTTGTaGGAGATGATTCAGCATGTT +
Preference number: 5 (lower is better)
Translates to: GASERKLGLGFVGDDSACWGWVL*EMIQHV
Trigger: AACATGCTGAATCATCTCCAACAAAACCCAGCCCCA...ACATGCTGAATCATCTCCAACAAAACCCAGCCCCAACTTTCTCTCTGATGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTCGATTAAGCTCCTCATaGGTAGGCTCCTTGTACAGT +
Preference number: 5 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPRLSSS*VGSLYS
Trigger: ACTGTACAAGGAGCCTACCAATGAGGAGCTTAATCG...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGAGGATTGCTTCAACATaGGGCACCATTACTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSRIAST*GTITSS
Trigger: GGAGCTAGTAATGGTGCCCAATGTTGAAGCAATCCT...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATATGCACCTCTCCAAGATaGGGTGACTACCAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: INTGGHCAPSMWSIHTHICTSPR*GDYQSP
Trigger: AGGGGACTGGTAGTCACCCAATCTTGGAGAGGTGCA...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAAGGGTCCCAGAGTCTTaGTGCTTTGGTGGATCTTGG +
Preference number: 5 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIRVPES*CFGGSW
Trigger: CCAAGATCCACCAAAGCACAAAGACTCTGGGACCCT...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACAAGCTCATTATTGAGGTaGACAAAGAGGGGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTSSLLR*TKRGLF
Trigger: GAACAACCCCCTCTTTGTCAACCTCAATAATGAGCT...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp TTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAACTGCTCTAAGCTCATTATTGAGGTaGACAAAGAGGGGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: FMPLCVPAKRTEQTVTALSSLLR*TKRGLF
Trigger: GAACAACCCCCTCTTTGTCAACCTCAATAATGAGCT...TAGAGCAGTTACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp TGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTTGGGGCTGGGTTTTGTaGGAGATGATTCAGCATGTT +
Preference number: 5 (lower is better)
Translates to: CSFNVVYSYTYSPFPLLSWGWVL*EMIQHV
Trigger: AACATGCTGAATCATCTCCAACAAAACCCAGCCCCA...ACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp ACAATAGAATTTATGCCACTGTGTGTGCCTGCCAAACGAACTGAACAGACAGTAATGGTGGTATGGATCTaGCGTGTAGACACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TIEFMPLCVPAKRTEQTVMVVWI*RVDTRK
Trigger: CTTCCTTGTGTCTACACGCAAGATCCATACCACCAT...TACTGTCTGTTCAGTTCGTTTGGCAGGCACACACAGTGGCATAAATTCTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS-3UTR CAA 90 bp CCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCGTTGACAAAGAGGGGGTaGTTCTTCCAATCAAACGTT +
Preference number: 5 (lower is better)
Translates to: PSMWSIHTHIAPFHCSVSLTKRG*FFQSNV
Trigger: AACGTTTGATTGGAAGAACAACCCCCTCTTTGTCAA...CGACACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp ACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTGACAAAGAGGGGGTaGTTCTTCCAATCAAACGTT +
Preference number: 5 (lower is better)
Translates to: TGGHCAPSMWSIHTHIAPLTKRG*FFQSNV
Trigger: AACGTTTGATTGGAAGAACAACCCCCTCTTTGTCAA...AGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp AGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTAGCTCATTATTGAGGTaGACAAAGAGGGGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: RRALCSFNVVYSYTYSPFSSLLR*TKRGLF
Trigger: GAACAACCCCCTCTTTGTCAACCTCAATAATGAGCT...AAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATACAAAGTCCTCCAGGATaGCTTCAACATTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: INTGGHCAPSMWSIHTHIQSPPG*LQHWAP
Trigger: TGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTTG...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp ATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATATAAGTTGGGGCTGGGTTTaGTTGGAGATGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: INTGGHCAPSMWSIHTHISWGWV*LEMIQH
Trigger: ATGCTGAATCATCTCCAACAAAACCCAGCCCCAACT...TATATGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS-3UTR CAA 90 bp TGGCATCAACACAGGAGGGCATTGTGCTCCTTCAATGTGGTCTATTCATACACATCTTCCAATCAAACGTaGATACCAAGAAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: WHQHRRALCSFNVVYSYTSSNQT*IPRKGI
Trigger: GATTCCTTTTCTTGGTATCAACGTTTGATTGGAAGA...TGTGTATGAATAGACCACATTGAAGGAGCACAATGCCCTCCTGTGTTGATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS-3UTR CAA 90 bp GCTCCTTCAATGTGGTCTATTCATACACATATAGCCCCTTTCCACTGCTCAGTGTCTTCCAATCAAACGTaGATACCAAGAAAAGGAATC +
Preference number: 5 (lower is better)
Translates to: APSMWSIHTHIAPFHCSVSSNQT*IPRKGI
Trigger: GATTCCTTTTCTTGGTATCAACGTTTGATTGGAAGA...CACTGAGCAGTGGAAAGGGGCTATATGTGTATGAATAGACCACATTGAAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS GCA 72 bp TCTGCCAGGCGCAGCTGGAAGGCAGCTCGGACCCGCTaGACGGCCTCAGCGTCCTGTGGCCACTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: SARRSWKAARTR*TASASCGHWPL
Trigger: CAGTGGCCAGTGGCCACAGGACGCTGAGGCCGTGCAGCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 72 bp CCCCGGCAGAAGGAGGCAGCTGGCGAGTCCACAGCCTaGCGGTGCCGCGGGATATGGCGAGGAGACAGGCGA +
Preference number: 6 (lower is better)
Translates to: PRQKEAAGESTA*RCRGIWRGDRR
Trigger: TCGCCTGTCTCCTCGCCATATCCCGCGGCACCGCCAGGCTGTGGACTCGCCAGCTGCCTCCTTCTGCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379470.5
CDS CCA 72 bp GGCAGCTCGGACCCGCTGCACGGCCTCAGCGTCCTGTaGCCACTGGCCACTGCCCTCCAGGTGACAAACCAC +
Preference number: 6 (lower is better)
Translates to: GSSDPLHGLSVL*PLATALQVTNH
Trigger: GTGGTTTGTCACCTGGAGGGCAGTGGCCAGTGGCCACAGGACGCTGAGGCCGTGCAGCGGGTCCGAGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 72 bp CAGGCTGGTCTGCCTCTGGACCCAGCTCAAGGACGCTaGTCAGTCCCTCAGGCCGGAGAAGGAGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: QAGLPLDPAQGR*SVPQAGEGVPG
Trigger: CCCTGGGACTCCTTCTCCGGCCTGAGGGACTGACCAGCGTCCTTGAGCTGGGTCCAGAGGCAGACCAGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp CCATGCTGTTGTGTCAACAGCTCTGCCAGGCGCAGCTaGAAGGCAGCTCGGACCCGCTGCACGGCCTCAGCG +
Preference number: 6 (lower is better)
Translates to: PCCCVNSSARRS*KAARTRCTASA
Trigger: CGCTGAGGCCGTGCAGCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGAGCTGTTGACACAACAGCATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 72 bp CCAGTAAACCCACCCTGGCCCTTGTCCAGCTCCCGCTaGCGCAGCCAGACCTTCAGAAGTGCCACGCCATCC +
Preference number: 6 (lower is better)
Translates to: PVNPPWPLSSSR*RSQTFRSATPS
Trigger: GGATGGCGTGGCACTTCTGAAGGTCTGGCTGCGGCAGCGGGAGCTGGACAAGGGCCAGGGTGGGTTTACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 72 bp CCATTGTCCTGCAGCTCTGGCCAGAGCTTCAGCCGGTaGCACGCTGCCTGCAGGCGACTCAGTGGACGGAGA +
Preference number: 6 (lower is better)
Translates to: PLSCSSGQSFSR*HAACRRLSGRR
Trigger: TCTCCGTCCACTGAGTCGCCTGCAGGCAGCGTGCCACCGGCTGAAGCTCTGGCCAGAGCTGCAGGACAATGG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp GCCTCCCAGACCACAGCTTCCCGAATGGCTCCGTCCTaGAAACGCCGAAGCTCCGAGCGGGATCCCCAGAAC +
Preference number: 6 (lower is better)
Translates to: ASQTTASRMAPS*KRRSSERDPQN
Trigger: GTTCTGGGGATCCCGCTCGGAGCTTCGGCGTTTCCAGGACGGAGCCATTCGGGAAGCTGTGGTCTGGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp AACCCTCACCAAGAAGCTGGGCACGCACCCACCGCTTaGCCAGCCGTGCCACACCAGAGAAGGCTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: NPHQEAGHAPTA*PAVPHQRRLGA
Trigger: AGCACCCAGCCTTCTCTGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CAA 90 bp TCATCAGCGAAACCCTCACCAAGAAGCTGGGCACGCACCCACCGCTaGGCCAGCCGTGCCACACCAGAGAAGGCTGGGTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSAKPSPRSWARTHR*ASRATPEKAGCCCC
Trigger: GCAGCAGCAGCACCCAGCCTTCTCTGGTGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGGTTTCGCTGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS TCA 72 bp TCAGTGGGAGACCCTCTAGCCCCCACAGTAGGCGACTaGGGTCGTCGTAGCAACGTACCGCCGCTACCAGGG +
Preference number: 6 (lower is better)
Translates to: SVGDPLAPTVGD*GRRSNVPPLPG
Trigger: CCCTGGTAGCGGCGGTACGTTGCTACGACGACCTCAGTCGCCTACTGTGGGGGCTAGAGGGTCTCCCACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 72 bp GGTGGTGAGCCAAGTGGGCCAGGTAGAGGGCACGCTTaGGGAAGTAGCGCTGGTTCAGCCCGTCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: GGEPSGPGRGHA*GSSAGSARPCP
Trigger: AGGACAAGGACGGGCTGAACCAGCGCTACTTCCGCAAGCGTGCCCTCTACCTGGCCCACTTGGCTCACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS GCA 72 bp ACGGCACTGCAGACCATGCTGTTGTGTCAACAGCTCTaGCAGGCGCAGCTGGAAGGCAGCTCGGACCCGCTG +
Preference number: 6 (lower is better)
Translates to: TALQTMLLCQQL*QAQLEGSSDPL
Trigger: CAGCGGGTCCGAGCTGCCTTCCAGCTGCGCCTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 72 bp TCCGTGTGCGTGGCAGTGGCACGGCACTGCAGACCATaGTGTTGTGTCAACAGCTCTGCCAGGCGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SVCVAVARHCRP*CCVNSSARRSW
Trigger: CCAGCTGCGCCTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCGTGCCACTGCCACGCACACGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 72 bp TCCAGGCTCTCATCAGCGAAACCCTCACCAAGAAGCTaGGCACGCACCCACCGCTTGGCCAGCCGTGCCACA +
Preference number: 6 (lower is better)
Translates to: SRLSSAKPSPRS*ARTHRLASRAT
Trigger: TGTGGCACGGCTGGCCAAGCGGTGGGTGCGTGCCCAGCTTCTTGGTGAGGGTTTCGCTGATGAGAGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CAA 72 bp GCAGGACTCTGCCCTCGGTACCAGGCAGAGCGCACATaGTTCTTGGTTGGCAGCAAGCGGCACGGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: AGLCPRYQAERT*FLVGSKRHGRK
Trigger: CTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGCAGAGTCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CAA 90 bp CAGGACTCTGCCCTCGGTACCAGGCAGAGCGCACATTGTTCTTGGTaGGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTGGAGGGCACG +
Preference number: 6 (lower is better)
Translates to: QDSALGTRQSAHCSW*AASGTGGRSQVEGT
Trigger: CGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGCAGAGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CAA 90 bp CCTGCAGGACTCTGCCCTCGGTACCAGGCAGAGCGCACATTGTTCTaGGTTGGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: PAGLCPRYQAERTLF*VGSKRHGRKKSGGG
Trigger: CCCTCCACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGCAGAGTCCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CAA 90 bp CCATCCCCTGCAGGACTCTGCCCTCGGTACCAGGCAGAGCGCACATaGTTCTTGGTTGGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGT +
Preference number: 6 (lower is better)
Translates to: PSPAGLCPRYQAERT*FLVGSKRHGRKKSG
Trigger: ACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGCAGAGTCCTGCAGGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS TCA 72 bp AGAAGTCAGGTGGAGGGCACGGATGCAGACGTACAGTaGCCAGGCGCTCATCCTTTCCACGCGGCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: RSQVEGTDADVQ*PGAHPFHAAAA
Trigger: TGCTGCGGCCGCGTGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS GCA 72 bp CGGCACGGGCGGAAGAAGTCAGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGGCGCTCATCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: RHGRKKSGGGHG*RRTVTRRSSFP
Trigger: TGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS GCA 72 bp TGCAGTCCGTGCAGGGCACTGGTGAGCAGTGGCAACTaGCTTGTGTCTCTCTCAAGGCGGAGGGAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: CSPCRALVSSGN*LVSLSRRREAA
Trigger: AGCTGCCTCCCTCCGCCTTGAGAGAGACACAAGGCAGTTGCCACTGCTCACCAGTGCCCTGCACGGACTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 72 bp GGTAACAATGACCATGACGGGGAGCTGTGCCCGAGCTaGCAGGAAGCCACTGCGGATCTCCACCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GNNDHDGELCPS*QEATADLHLLL
Trigger: GAGGAGCAGGTGGAGATCCGCAGTGGCTTCCTGGCAGCTCGGGCACAGCTCCCCGTCATGGTCATTGTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS GCA 72 bp CGGCACGGGCGGAAGAAGTCAGGTGGAGGGCACGGATaGAGACGTACAGTGACCAGGCGCTCATCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: RHGRKKSGGGHG*RRTVTRRSSFP
Trigger: AGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCTTCCGCCCGTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 72 bp CTGCTGCTGCAGTCCGTGCAGGGCACTGGTGAGCAGTaGCAACTGCCTTGTGTCTCTCTCAAGGCGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LLLQSVQGTGEQ*QLPCVSLKAEG
Trigger: TCCCTCCGCCTTGAGAGAGACACAAGGCAGTTGCCACTGCTCACCAGTGCCCTGCACGGACTGCAGCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 72 bp GGCCCAGCCACATATCCCCAGGCTTCTCTCAGGCTATaGAGCTCAGACCCCCTGGTGTGGATTGGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: GPATYPQASLRL*SSDPLVWIGRA
Trigger: TGCCCTGCCAATCCACACCAGGGGGTCTGAGCTCCATAGCCTGAGAGAAGCCTGGGGATATGTGGCTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS CAA 72 bp GCCCTCGGTACCAGGCAGAGCGCACATTGTTCTTGGTaGGCAGCAAGCGGCACGGGCGGAAGAAGTCAGGTG +
Preference number: 6 (lower is better)
Translates to: ALGTRQSAHCSW*AASGTGGRSQV
Trigger: CACCTGACTTCTTCCGCCCGTGCCGCTTGCTGCCAACCAAGAACAATGTGCGCTCTGCCTGGTACCGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS TCA 72 bp AGGCGCTCATCCTTTCCTGCCAGAGACAGTGAGTGCTaGGACTCTGCAGGAGCCCTTGGAGCCAGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: RRSSFPARDSEC*DSAGALGARGL
Trigger: GAGCCCTCTGGCTCCAAGGGCTCCTGCAGAGTCTCAGCACTCACTGTCTCTGGCAGGAAAGGATGAGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS GCA 72 bp CTGGTGGGGAATAAGGCGCTTCTGGGACATAGAGGCTaGCTCCCAGACCACAGCTTCCCGAATGGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: LVGNKALLGHRG*LPDHSFPNGSV
Trigger: GACGGAGCCATTCGGGAAGCTGTGGTCTGGGAGGCAGCCTCTATGTCCCAGAAGCGCCTTATTCCCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp GCCCAGAAGGTAGCTGCCCACAACAGTAACCTGGGCTaGGGGCAGGAAGCGGAAACAGCCCTTCACGGCATA +
Preference number: 6 (lower is better)
Translates to: AQKVAAHNSNLG*GQEAETALHGI
Trigger: TATGCCGTGAAGGGCTGTTTCCGCTTCCTGCCCCCAGCCCAGGTTACTGTTGTGGGCAGCTACCTTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 72 bp AGGTGGGTGACCACCTGGTGGGGAATAAGGCGCTTCTaGGACATAGAGGCTGCCTCCCAGACCACAGCTTCC +
Preference number: 6 (lower is better)
Translates to: RWVTTWWGIRRF*DIEAASQTTAS
Trigger: GGAAGCTGTGGTCTGGGAGGCAGCCTCTATGTCCCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp CCCAGGCTTCTCTCAGGCTATGGAGCTCAGACCCCCTaGTGTGGATTGGCAGGGCAGGGCATCTTAGAACCC +
Preference number: 6 (lower is better)
Translates to: PRLLSGYGAQTP*CGLAGQGILEP
Trigger: GGGTTCTAAGATGCCCTGCCCTGCCAATCCACACCAGGGGGTCTGAGCTCCATAGCCTGAGAGAAGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS CCA 72 bp TCTGTCTCAGGGACTGAGGGCACCCTCACAACCCGCTaGTTGACCTCCCGTAGGAAGGCATCAATCCGATCC +
Preference number: 6 (lower is better)
Translates to: SVSGTEGTLTTR*LTSRRKASIRS
Trigger: GGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS CCA 72 bp CCTGGGCATGGTCAGTGCCACATCCACATTGATGTCTaGTCGGATGCAGGTGCCCAGAAGGTAGCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: PGHGQCHIHIDV*SDAGAQKVAAH
Trigger: GTGGGCAGCTACCTTCTGGGCACCTGCATCCGACCAGACATCAATGTGGATGTGGCACTGACCATGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 72 bp CCTGAGGAATCCAGGAAGACAACGGAGAAGGCCTGGTaGAAGTCAGCCAGGGCCGGCAAAGAGGGATCTGAG +
Preference number: 6 (lower is better)
Translates to: PEESRKTTEKAW*KSARAGKEGSE
Trigger: CTCAGATCCCTCTTTGCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGTCTTCCTGGATTCCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp TGGCCTGAGGAATCCAGGAAGACAACGGAGAAGGCCTaGTGGAAGTCAGCCAGGGCCGGCAAAGAGGGATCT +
Preference number: 6 (lower is better)
Translates to: WPEESRKTTEKA*WKSARAGKEGS
Trigger: AGATCCCTCTTTGCCGGCCCTGGCTGACTTCCACCAGGCCTTCTCCGTTGTCTTCCTGGATTCCTCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp TCAGCATGGAGTGCCAAGAGGTGGGTGACCACCTGGTaGGGAATAAGGCGCTTCTGGGACATAGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SAWSAKRWVTTW*GIRRFWDIEAA
Trigger: GGCAGCCTCTATGTCCCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCTCTTGGCACTCCATGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp TGGAGTTGGTGGGAACACCTCTGTGTAGCGCAGCACTaGGTGAGCTCCCTGAACAGCAGACACGGTCAGTGG +
Preference number: 6 (lower is better)
Translates to: WSWWEHLCVAQH*VSSLNSRHGQW
Trigger: CCACTGACCGTGTCTGCTGTTCAGGGAGCTCACCCAGTGCTGCGCTACACAGAGGTGTTCCCACCAACTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CAA 72 bp GTCTCAGGGACTGAGGGCACCCTCACAACCCGCTGGTaGACCTCCCGTAGGAAGGCATCAATCCGATCCTTC +
Preference number: 6 (lower is better)
Translates to: VSGTEGTLTTRW*TSRRKASIRSF
Trigger: GAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS CAA 90 bp CCCAGGCTTCTCTCAGGCTATGGAGCTCAGACCCCCTGGTGTGGATaGGCAGGGCAGGGCATCTTAGAACCCCTTCTGCCACTTGCTCAA +
Preference number: 6 (lower is better)
Translates to: PRLLSGYGAQTPWCG*AGQGILEPLLPLAQ
Trigger: TTGAGCAAGTGGCAGAAGGGGTTCTAAGATGCCCTGCCCTGCCAATCCACACCAGGGGGTCTGAGCTCCATAGCCTGAGAGAAGCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS TCA 72 bp TCTCAGGGACTGAGGGCACCCTCACAACCCGCTGGTTaGCCTCCCGTAGGAAGGCATCAATCCGATCCTTCT +
Preference number: 6 (lower is better)
Translates to: SQGLRAPSQPAG*PPVGRHQSDPS
Trigger: AGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS TCA 72 bp CAGGCGCTCATCCTTTCCACGCGGCCGCAGCAACAGTaGGGGTTTCAGGTGGCAGCCATTTGTGTAGGAGAA +
Preference number: 6 (lower is better)
Translates to: QALILSTRPQQQ*GFQVAAICVGE
Trigger: TTCTCCTACACAAATGGCTGCCACCTGAAACCCTCACTGTTGCTGCGGCCGCGTGGAAAGGATGAGCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS TCA 72 bp AGAAGTCAGGTGGAGGGCACGGATGCAGACGTACAGTaGCCAGGCGCTCATCCTTTCCTGCCAGAGACAGTG +
Preference number: 6 (lower is better)
Translates to: RSQVEGTDADVQ*PGAHPFLPETV
Trigger: CACTGTCTCTGGCAGGAAAGGATGAGCGCCTGGTCACTGTACGTCTGCATCCGTGCCCTCCACCTGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS GCA 72 bp TTAAGGACATCCGTGTGCGTGGCAGTGGCACGGCACTaGAGACCATGCTGTTGTGTCAACAGCTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: LRTSVCVAVARH*RPCCCVNSSAR
Trigger: CCTGGCAGAGCTGTTGACACAACAGCATGGTCTGCAGTGCCGTGCCACTGCCACGCACACGGATGTCCTTAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 72 bp CTGTGCCTTCTCCTCCAGATTTACCATCCCATGCTATaGCCTCAGCCCAATGTGTGCCTCTCACCACGCGGC +
Preference number: 6 (lower is better)
Translates to: LCLLLQIYHPML*PQPNVCLSPRG
Trigger: GCCGCGTGGTGAGAGGCACACATTGGGCTGAGGGCATAGCATGGGATGGTAAATCTGGAGGAGAAGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 72 bp GCCCGGATCATGGGTTTGGGAGTCATCAACAGCAGGTaGAACCCGTCGTCAGCTCTGCTGTCCAGCAACATC +
Preference number: 6 (lower is better)
Translates to: ARIMGLGVINSR*NPSSALLSSNI
Trigger: GATGTTGCTGGACAGCAGAGCTGACGACGGGTTCCACCTGCTGTTGATGACTCCCAAACCCATGATCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp GTCAGGGTCCCAGAGTCTTTGTGCTTTGGTGGATCTTaGCTGATGTCCCACTCTGGGACTGGGGGTCGAGAG +
Preference number: 6 (lower is better)
Translates to: VRVPESLCFGGS*LMSHSGTGGRE
Trigger: CTCTCGACCCCCAGTCCCAGAGTGGGACATCAGCCAAGATCCACCAAAGCACAAAGACTCTGGGACCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp GAGTCCCAGGGTCAGGGTCCCAGAGTCTTTGTGCTTTaGTGGATCTTGGCTGATGTCCCACTCTGGGACTGG +
Preference number: 6 (lower is better)
Translates to: ESQGQGPRVFVL*WILADVPLWDW
Trigger: CCAGTCCCAGAGTGGGACATCAGCCAAGATCCACCAAAGCACAAAGACTCTGGGACCCTGACCCTGGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp CCGCAGAGTCTCATAGAAGGAGAAGGCTGGACGGACTaGAGTTGGTGGGAACACCTCTGTGTAGCGCAGCAC +
Preference number: 6 (lower is better)
Translates to: PQSLIEGEGWTD*SWWEHLCVAQH
Trigger: GTGCTGCGCTACACAGAGGTGTTCCCACCAACTCCAGTCCGTCCAGCCTTCTCCTTCTATGAGACTCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 72 bp GGACCGCTCCCGCAGAGTCTCATAGAAGGAGAAGGCTaGACGGACTGGAGTTGGTGGGAACACCTCTGTGTA +
Preference number: 6 (lower is better)
Translates to: GPLPQSLIEGEG*TDWSWWEHLCV
Trigger: TACACAGAGGTGTTCCCACCAACTCCAGTCCGTCCAGCCTTCTCCTTCTATGAGACTCTGCGGGAGCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS CCA 72 bp AATGTCCTGCTGTCCGTCTACAGCTTGCTCCAGAGCTaGGATCACACAGTCCACCTCTCACTTCGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: NVLLSVYSLLQS*DHTVHLSLRAS
Trigger: GGAGGCCCGAAGTGAGAGGTGGACTGTGTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACAGCAGGACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS CCA 72 bp GCTTCTCTCAGGCTATGGAGCTCAGACCCCCTGGTGTaGATTGGCAGGGCAGGGCATCTTAGAACCCCTTCT +
Preference number: 6 (lower is better)
Translates to: ASLRLWSSDPLV*IGRAGHLRTPS
Trigger: AGAAGGGGTTCTAAGATGCCCTGCCCTGCCAATCCACACCAGGGGGTCTGAGCTCCATAGCCTGAGAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS CAA 72 bp GGTCAGGGTCCCAGAGTCTTTGTGCTTTGGTGGATCTaGGCTGATGTCCCACTCTGGGACTGGGGGTCGAGA +
Preference number: 6 (lower is better)
Translates to: GQGPRVFVLWWI*ADVPLWDWGSR
Trigger: TCTCGACCCCCAGTCCCAGAGTGGGACATCAGCCAAGATCCACCAAAGCACAAAGACTCTGGGACCCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CAA 90 bp GTGAGCTCTGTCTCAGGGACTGAGGGCACCCTCACAACCCGCTGGTaGACCTCCCGTAGGAAGGCATCAATCCGATCCTTCTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: VSSVSGTEGTLTTRW*TSRRKASIRSFFFS
Trigger: AGAGAAGAAGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CAA 90 bp GGTTCAGCCAATGTACGCTTCCTGGAGGATGCTTTCTTCCCCTCTTaGCCTGTGCCTTCCAGGGCTGGTTCCATCACCTGCTCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: GSANVRFLEDAFFPS*PVPSRAGSITCSVP
Trigger: AGGGACAGAGCAGGTGATGGAACCAGCCCTGGAAGGCACAGGCAAAGAGGGGAAGAAAGCATCCTCCAGGAAGCGTACATTGGCTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496319.2
CDS TCA 72 bp CAATGTGTGCCTCTCACCACGCGGCCGCAGCAACAGTaGGGGTTTCAGGTGGCAGCCATTTGTGTAGGAGAA +
Preference number: 6 (lower is better)
Translates to: QCVPLTTRPQQQ*GFQVAAICVGE
Trigger: TTCTCCTACACAAATGGCTGCCACCTGAAACCCTCACTGTTGCTGCGGCCGCGTGGTGAGAGGCACACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS GCA 72 bp GGCAGGGCAGGGCATCTTAGAACCCCTTCTGCCACTTaGTCAACCACCCATTCCCATGTAGACTTAGGGTGC +
Preference number: 6 (lower is better)
Translates to: GRAGHLRTPSAT*STTHSHVDLGC
Trigger: GCACCCTAAGTCTACATGGGAATGGGTGGTTGAGCAAGTGGCAGAAGGGGTTCTAAGATGCCCTGCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS GCA 72 bp CCCCTAAACCCTGGACCTTACCCTGGGCATGGTCAGTaGCACATCCACATTGATGTCTGGTCGGATGCAGGT +
Preference number: 6 (lower is better)
Translates to: PLNPGPYPGHGQ*HIHIDVWSDAG
Trigger: ACCTGCATCCGACCAGACATCAATGTGGATGTGGCACTGACCATGCCCAGGGTAAGGTCCAGGGTTTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 72 bp CCACGCCATCCTTCAGGCCCTGGGCTGAACTCAGAATaGTTGACAGCAGCTGCAAATGGGACTCGAGAACTG +
Preference number: 6 (lower is better)
Translates to: PRHPSGPGLNSE*LTAAANGTREL
Trigger: CAGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 72 bp ATGTCAGCATGGAGTGCCAAGAGGTGGGTGACCACCTaGTGGGGAATAAGGCGCTTCTGGGACATAGAGGCT +
Preference number: 6 (lower is better)
Translates to: MSAWSAKRWVTT*WGIRRFWDIEA
Trigger: AGCCTCTATGTCCCAGAAGCGCCTTATTCCCCACCAGGTGGTCACCCACCTCTTGGCACTCCATGCTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CAA 90 bp AGGCCTTCACCCAGCACAGCAAAGTCCTCCAGGATTGCTTCAACATaGGGCACCATTACTAGCTCCCCACCTCGAGACATCACCATGCGC +
Preference number: 6 (lower is better)
Translates to: RPSPSTAKSSRIAST*GTITSSPPRDITMR
Trigger: GCGCATGGTGATGTCTCGAGGTGGGGAGCTAGTAATGGTGCCCAATGTTGAAGCAATCCTGGAGGACTTTGCTGTGCTGGGTGAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS CAA 90 bp AGACTCTCTGTCTCAGGGACTGAGGGCACCCTCACAACCCGCTGGTaGACCTCCCGTAGGAAGGCATCAATCCGATCCTTCTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RLSVSGTEGTLTTRW*TSRRKASIRSFFFS
Trigger: AGAGAAGAAGAAGGATCGGATTGATGCCTTCCTACGGGAGGTCAACCAGCGGGTTGTGAGGGTGCCCTCAGTCCCTGAGACAGAGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496319.2
CDS TCA 72 bp AGAGGCAGTGACATCAGCACAGAGGTTGAGATGGCCTaGGGAATCCAGGAAGACAACGGAGAAGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: RGSDISTEVEMA*GIQEDNGEGLV
Trigger: CACCAGGCCTTCTCCGTTGTCTTCCTGGATTCCTCAGGCCATCTCAACCTCTGTGCTGATGTCACTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS TCA 72 bp CCATTCCCATGTAGACTTAGGGTGCAGCACGAAGGATaGTGGCTGGCCGCAAGGAAACTTCTCAGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: PFPCRLRVQHEG*WLAARKLLSWG
Trigger: TCCCCAGCTGAGAAGTTTCCTTGCGGCCAGCCATCATCCTTCGTGCTGCACCCTAAGTCTACATGGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS GCA 72 bp TCTAGAGGTCCAATGTCCTGCTGTCCGTCTACAGCTTaGTCCAGAGCTGGGATCACACAGTCCACCTCTCAC +
Preference number: 6 (lower is better)
Translates to: SRGPMSCCPSTA*SRAGITQSTSH
Trigger: GTGAGAGGTGGACTGTGTGATCCCAGCTCTGGAGCAAGCTGTAGACGGACAGCAGGACATTGGACCTCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379470.5
CDS GCA 72 bp TGCCTCTGTGCCTTCTCCTCCAGATTTACCATCCCATaGTATGCCCTCAGCCCAATGTGTGCCTCTCACCAC +
Preference number: 6 (lower is better)
Translates to: CLCAFSSRFTIP*YALSPMCASHH
Trigger: GTGGTGAGAGGCACACATTGGGCTGAGGGCATAGCATGGGATGGTAAATCTGGAGGAGAAGGCACAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 72 bp CAGACCTTCAGAAGTGCCACGCCATCCTTCAGGCCCTaGGCTGAACTCAGAATGGTTGACAGCAGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: QTFRSATPSFRP*AELRMVDSSCK
Trigger: TTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCAGGGCCTGAAGGATGGCGTGGCACTTCTGAAGGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CCA 72 bp GATGCAGGACATGGTCAAAAGCCCGGATCATGGGTTTaGGAGTCATCAACAGCAGGTGGAACCCGTCGTCAG +
Preference number: 6 (lower is better)
Translates to: DAGHGQKPGSWV*ESSTAGGTRRQ
Trigger: CTGACGACGGGTTCCACCTGCTGTTGATGACTCCCAAACCCATGATCCGGGCTTTTGACCATGTCCTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp GACGGAGATGCAGGACATGGTCAAAAGCCCGGATCATaGGTTTGGGAGTCATCAACAGCAGGTGGAACCCGT +
Preference number: 6 (lower is better)
Translates to: DGDAGHGQKPGS*VWESSTAGGTR
Trigger: ACGGGTTCCACCTGCTGTTGATGACTCCCAAACCCATGATCCGGGCTTTTGACCATGTCCTGCATCTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS GCA 72 bp ATCCGAAACACAAATCCATCCTTAAGGACATCCGTGTaGGTGGCAGTGGCACGGCACTGCAGACCATGCTGT +
Preference number: 6 (lower is better)
Translates to: IRNTNPSLRTSV*VAVARHCRPCC
Trigger: ACAGCATGGTCTGCAGTGCCGTGCCACTGCCACGCACACGGATGTCCTTAAGGATGGATTTGTGTTTCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000297990.9
ENST00000379471.3
CDS GCA 72 bp ACTTGCTCAACCACCCATTCCCATGTAGACTTAGGGTaGAGCACGAAGGATGATGGCTGGCCGCAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: TCSTTHSHVDLG*STKDDGWPQGN
Trigger: GTTTCCTTGCGGCCAGCCATCATCCTTCGTGCTGCACCCTAAGTCTACATGGGAATGGGTGGTTGAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS CCA 72 bp CATATCTGGAGAGCAAAGCTCCAAAAGGACAGCAACTaGCCCGAGGGATCTAAGCTGCCTTCAGGATGCCTG +
Preference number: 6 (lower is better)
Translates to: HIWRAKLQKDSN*PEGSKLPSGCL
Trigger: CAGGCATCCTGAAGGCAGCTTAGATCCCTCGGGCCAGTTGCTGTCCTTTTGGAGCTTTGCTCTCCAGATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CCA 72 bp GCCACGGTTAGCAACACTAGGCCCAGTTCTCATATCTaGAGAGCAAAGCTCCAAAAGGACAGCAACTGGCCC +
Preference number: 6 (lower is better)
Translates to: ATVSNTRPSSHI*RAKLQKDSNWP
Trigger: GGGCCAGTTGCTGTCCTTTTGGAGCTTTGCTCTCCAGATATGAGAACTGGGCCTAGTGTTGCTAACCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464829.5
CDS CAA 72 bp AGATGCAGGACATGGTCAAAAGCCCGGATCATGGGTTaGGGAGTCATCAACAGCAGGTGGAACCCGTCGTCA +
Preference number: 6 (lower is better)
Translates to: RCRTWSKARIMG*GVINSRWNPSS
Trigger: TGACGACGGGTTCCACCTGCTGTTGATGACTCCCAAACCCATGATCCGGGCTTTTGACCATGTCCTGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CAA 90 bp GAGTGGAACAAGATCTCAGTCTCCCGAAGGCGATTAAGCTCCTCATaGGTAGGCTCCTTGTACAGTTCTGCCCTGCTGAGCTTCACTGGC +
Preference number: 6 (lower is better)
Translates to: EWNKISVSRRRLSSS*VGSLYSSALLSFTG
Trigger: GCCAGTGAAGCTCAGCAGGGCAGAACTGTACAAGGAGCCTACCAATGAGGAGCTTAATCGCCTTCGGGAGACTGAGATCTTGTTCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS CAA 72 bp AAGATCTCAGTCTCCCGAAGGCGATTAAGCTCCTCATaGGTAGGCTCCTTGTACAGTTCTGCCCTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: KISVSRRRLSSS*VGSLYSSALLS
Trigger: GCTCAGCAGGGCAGAACTGTACAAGGAGCCTACCAATGAGGAGCTTAATCGCCTTCGGGAGACTGAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
ENST00000496319.2
CDS CAA 90 bp AGGGCCGGCAAAGAGGGATCTGAGCTGAGACATAAACTGATCCCGTaGACTGTCAGGTCTGTAGTGGCCAGAAACTGCAAGACACTTCTC +
Preference number: 6 (lower is better)
Translates to: RAGKEGSELRHKLIP*TVRSVVARNCKTLL
Trigger: GAGAAGTGTCTTGCAGTTTCTGGCCACTACAGACCTGACAGTCAACGGGATCAGTTTATGTCTCAGCTCAGATCCCTCTTTGCCGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp TGGGCTGAACTCAGAATGGTTGACAGCAGCTGCAAATaGGACTCGAGAACTGTATCTTGCAGGACCCATGTG +
Preference number: 6 (lower is better)
Translates to: WAELRMVDSSCK*DSRTVSCRTHV
Trigger: CACATGGGTCCTGCAAGATACAGTTCTCGAGTCCCATTTGCAGCTGCTGTCAACCATTCTGAGTTCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
ENST00000464829.5
CDS CAA 72 bp AAAGAGGGATCTGAGCTGAGACATAAACTGATCCCGTaGACTGTCAGGTCTGTAGTGGCCAGAAACTGCAAG +
Preference number: 6 (lower is better)
Translates to: KEGSELRHKLIP*TVRSVVARNCK
Trigger: CTTGCAGTTTCTGGCCACTACAGACCTGACAGTCAACGGGATCAGTTTATGTCTCAGCTCAGATCCCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000353159.6
ENST00000379471.3
CDS CCA 72 bp GTTGATACCAAGAAAAGGAATCGAAGGAAGCCAACCTaGGGGGAACTAAAGGGCTGGAGTAAGCAAAGAATC +
Preference number: 6 (lower is better)
Translates to: VDTKKRNRRKPT*GELKGWSKQRI
Trigger: GATTCTTTGCTTACTCCAGCCCTTTAGTTCCCCCCAGGTTGGCTTCCTTCGATTCCTTTTCTTGGTATCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379470.5
CDS CAA 90 bp TGCTCCTCCACAGTGAGCTCATTATTGAGGTTGACAAAGAGGGGGTaGTTCTTCCAATCAAACGTTGATACCAAGAAAAGGAATCGAAGG +
Preference number: 6 (lower is better)
Translates to: CSSTVSSLLRLTKRG*FFQSNVDTKKRNRR
Trigger: CCTTCGATTCCTTTTCTTGGTATCAACGTTTGATTGGAAGAACAACCCCCTCTTTGTCAACCTCAATAATGAGCTCACTGTGGAGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS TCA 72 bp GTTGACAAAGAGGGGGTTGTTCTTCCAATCAAACGTTaGTACCAAGAAAAGGAATCGAAGGAAGCCAACCTG +
Preference number: 6 (lower is better)
Translates to: VDKEGVVLPIKR*YQEKESKEANL
Trigger: CAGGTTGGCTTCCTTCGATTCCTTTTCTTGGTATCAACGTTTGATTGGAAGAACAACCCCCTCTTTGTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3
CDS TCA 72 bp AAAACTCAGGAGAATCGTTACTTGGATGAACATCACTaGGCGCTGAGCCGAAAATTCCTTGAGTTAAGAGCT +
Preference number: 6 (lower is better)
Translates to: KTQENRYLDEHH*ALSRKFLELRA
Trigger: AGCTCTTAACTCAAGGAATTTTCGGCTCAGCGCTCAGTGATGTTCATCCAAGTAACGATTCTCCTGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496319.2
CDS CAA 72 bp ACAGTGAGCTCATTATTGAGGTTGACAAAGAGGGGGTaGTTCTTCCAATCAAACGTTGATACCAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: TVSSLLRLTKRG*FFQSNVDTKKR
Trigger: CCTTTTCTTGGTATCAACGTTTGATTGGAAGAACAACCCCCTCTTTGTCAACCTCAATAATGAGCTCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297990.9
ENST00000379470.5
ENST00000379471.3