RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOL4L (Homo sapiens)

Ensembl gene IDs: ENSG00000197183

Ensembl transcript IDs: ENST00000201961.6, ENST00000326071.8, ENST00000359676.9, ENST00000375677.5, ENST00000375678.7, ENST00000419612.1, ENST00000470428.1, ENST00000475781.1, ENST00000485364.1, ENST00000616976.1, ENST00000621426.6

Found 1051 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGAGCGAGTGGCTCTCCGTGGCCATCCTAGGATCCACTCGGCCCTaGCTCCCCTGGGGCCTCTCTGCTCTGAGGGAGGAAAGGCAACAG +
Preference number: 1 (lower is better)
Translates to: GSEWLSVAILGSTRP*LPWGLSALREERQQ
Trigger: CTGTTGCCTTTCCTCCCTCAGAGCAGAGAGGCCCCAGGGGAGCCAGGGCCGAGTGGATCCTAGGATGGCCACGGAGAGCCACTCGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp TGGCTCTCCGTGGCCATCCTAGGATCCACTCGGCCCTGGCTCCCCTaGGGCCTCTCTGCTCTGAGGGAGGAAAGGCAACAGAGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: WLSVAILGSTRPWLP*GLSALREERQQRAS
Trigger: AGAAGCCCTCTGTTGCCTTTCCTCCCTCAGAGCAGAGAGGCCCCAGGGGAGCCAGGGCCGAGTGGATCCTAGGATGGCCACGGAGAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp TCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGGAGCTaGAGCCCGCCCTGGAGCTCACGGCTGCCTGATAGCCGGGGCTCA +
Preference number: 1 (lower is better)
Translates to: STDPFTPNMAQGDGS*SPPWSSRLPDSRGS
Trigger: TGAGCCCCGGCTATCAGGCAGCCGTGAGCTCCAGGGCGGGCTGCAGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp CAGAGAGCTGCTGTCATGGCTACGGAGTGTTGCACGGAGAGGCCCTaGGGGCCTGCTGAGGTCTGGGCGAGTCCCTGGTTTAGCAGCACT +
Preference number: 1 (lower is better)
Translates to: QRAAVMATECCTERP*GPAEVWASPWFSST
Trigger: AGTGCTGCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCATGACAGCAGCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp TGCAGAAAAGCTGGTTTGGGAAGGGGTGCCTGTTCTGGGAGCGAGTaGCTCTCCGTGGCCATCCTAGGATCCACTCGGCCCTGGCTCCCC +
Preference number: 1 (lower is better)
Translates to: CRKAGLGRGACSGSE*LSVAILGSTRPWLP
Trigger: GGGGAGCCAGGGCCGAGTGGATCCTAGGATGGCCACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCAGCTTTTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp GCTACGGAGTGTTGCACGGAGAGGCCCTGGGGGCCTGCTGAGGTCTaGGCGAGTCCCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAG +
Preference number: 1 (lower is better)
Translates to: ATECCTERPWGPAEV*ASPWFSSTGRYCTE
Trigger: CTCAGTGCAATACCTACCAGTGCTGCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGCCTCTCCGTGCAACACTCCGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp TGCACGGAGAGGCCCTGGGGGCCTGCTGAGGTCTGGGCGAGTCCCTaGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTG +
Preference number: 1 (lower is better)
Translates to: CTERPWGPAEVWASP*FSSTGRYCTEQEEV
Trigger: CACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGCCTCTCCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp GTGCCATCCACTGTTTGCCTTAAGTGCTTACTATCTGGAGCCCTGTaGCCCTCCCCGGAGGTGGGACCTCATGAAGGAGCTGCCCCCAGA +
Preference number: 1 (lower is better)
Translates to: VPSTVCLKCLLSGAL*PSPEVGPHEGAAPR
Trigger: TCTGGGGGCAGCTCCTTCATGAGGTCCCACCTCCGGGGAGGGGCACAGGGCTCCAGATAGTAAGCACTTAAGGCAAACAGTGGATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp ACGCATCCGCTTGGCTGCCTTTCTTGTCTCGCTCTCACAGGCAGCTaGCAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGT +
Preference number: 1 (lower is better)
Translates to: THPLGCLSCLALTGS*QDVFCHGRGQMGWR
Trigger: ACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 90 bp AGTGGCCACAGCTGCAACAGGCAATTGGCTGCAGAAAAGCTGGTTTaGGAAGGGGTGCCTGTTCTGGGAGCGAGTGGCTCTCCGTGGCCA +
Preference number: 1 (lower is better)
Translates to: SGHSCNRQLAAEKLV*EGVPVLGASGSPWP
Trigger: TGGCCACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGCTGTGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp GAGGCAGTGGCCACAGCTGCAACAGGCAATTGGCTGCAGAAAAGCTaGTTTGGGAAGGGGTGCCTGTTCTGGGAGCGAGTGGCTCTCCGT +
Preference number: 1 (lower is better)
Translates to: EAVATAATGNWLQKS*FGKGCLFWERVALR
Trigger: ACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp GCTGCAACAGGCAATTGGCTGCAGAAAAGCTGGTTTGGGAAGGGGTaGCTGTTCTGGGAGCGAGTGGCTCTCCGTGGCCATCCTAGGATC +
Preference number: 1 (lower is better)
Translates to: AATGNWLQKSWFGKG*LFWERVALRGHPRI
Trigger: GATCCTAGGATGGCCACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp TGCCTTTCTTGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTaGCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTC +
Preference number: 1 (lower is better)
Translates to: CLSCLALTGSCQDVF*HGRGQMGWRGSGHL
Trigger: GAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 90 bp TTCTTGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATaGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCATGC +
Preference number: 1 (lower is better)
Translates to: FLSRSHRQLPGCFLP*PRSDGVAWVWSSPC
Trigger: GCATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 90 bp TGCAGTGGCTGGTTAGGGACAGGACGCTCTCTGGGTTCCAGCTCCTaGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTG +
Preference number: 1 (lower is better)
Translates to: CSGWLGTGRSLGSSS*TPSLDLLTSQADTL
Trigger: CAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAGAGAGCGTCCTGTCCCTAACCAGCCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 90 bp GAAGGGCTGGTCTTAGGAGAACCCAAGTGGCTCCTCCACTTCCACTaGTCCCTTTACTCCAAACATGGCGCAAGGGGATGGGAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: EGLVLGEPKWLLHFH*SLYSKHGARGWELQ
Trigger: CTGCAGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCACTTGGGTTCTCCTAAGACCAGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp CGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTaGATGGCTGGGGTGTGGGAGAGGCCTTGGGCACTGGAGGTTGTG +
Preference number: 1 (lower is better)
Translates to: RIQMLSSTEQVGPDV*MAGVWERPWALEVV
Trigger: CACAACCTCCAGTGCCCAAGGCCTCTCCCACACCCCAGCCATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp GCTTCAGGTGTAGTTTCACTGGAAAGGAGGAGCCCACCCAAGAGGTaGGGTCGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAG +
Preference number: 1 (lower is better)
Translates to: ASGVVSLERRSPPKR*GRHDEIHCPGGAWE
Trigger: CTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCGACCCCACCTCTTGGGTGGGCTCCTCCTTTCCAGTGAAACTACACCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp ATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGGCCCACTGTC +
Preference number: 1 (lower is better)
Translates to: MPSESFILSLSSWSS*SSSSSSAVGARPTV
Trigger: GACAGTGGGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR GCA 90 bp AGGGAGCCCCTTCCCCAGTCTTTCTCACTCCTGTCTGCCAAGAAATaGAAACGGTTCATGTCTAGCTTGGGTACTGCCTCTGGGAGGAGA +
Preference number: 1 (lower is better)
Translates to: REPLPQSFSLLSAKK*KRFMSSLGTASGRR
Trigger: TCTCCTCCCAGAGGCAGTACCCAAGCTAGACATGAACCGTTTGCATTTCTTGGCAGACAGGAGTGAGAAAGACTGGGGAAGGGGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp CCCAGGGAAGAACTACATTCATCCCACAGCTCTGCAGCAAAGTCCTaGCTTCCCTTTTCCTCTGTCCATGCAGTTACCCACCAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: PREELHSSHSSAAKS*LPFSSVHAVTHQQP
Trigger: TGGCTGCTGGTGGGTAACTGCATGGACAGAGGAAAAGGGAAGGCAGGACTTTGCTGCAGAGCTGTGGGATGAATGTAGTTCTTCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp CACTCCCAGGCTGCCCAGGGAAGAACTACATTCATCCCACAGCTCTaGAGCAAAGTCCTGCCTTCCCTTTTCCTCTGTCCATGCAGTTAC +
Preference number: 1 (lower is better)
Translates to: HSQAAQGRTTFIPQL*SKVLPSLFLCPCSY
Trigger: GTAACTGCATGGACAGAGGAAAAGGGAAGGCAGGACTTTGCTGCAGAGCTGTGGGATGAATGTAGTTCTTCCCTGGGCAGCCTGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 90 bp AGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGGAGTGTaGGGTAGAATACAGGTGACCATGGACTGGGGCTTCTGTAGAATG +
Preference number: 1 (lower is better)
Translates to: RTGSGHILEKAHAGV*GRIQVTMDWGFCRM
Trigger: CATTCTACAGAAGCCCCAGTCCATGGTCACCTGTATTCTACCTCACACTCCAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp GAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTaGAGGGTGGTCAGTTCCAACAGCTTGAACTCAGAAAAACATGAC +
Preference number: 1 (lower is better)
Translates to: ENTLNLRSCRSTKAG*RVVSSNSLNSEKHD
Trigger: GTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp CAAATGATCACTTTGTGCCCTGAGGCCCTTCAGAAGATTTTTAAATaGCTGTGGGACAAGGGCTTTGGGAGCTCCTTTTGGGAGAAGGCA +
Preference number: 1 (lower is better)
Translates to: QMITLCPEALQKIFK*LWDKGFGSSFWEKA
Trigger: TGCCTTCTCCCAAAAGGAGCTCCCAAAGCCCTTGTCCCACAGCCATTTAAAAATCTTCTGAAGGGCCTCAGGGCACAAAGTGATCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp GAGGTTTTTGTTTGTGGCTTTGCTAAGCAGATGAGCTTAGTGAGGTaGATCTTCCTCCTCAAGAGCAAGTCTTGCAGAACACACAGGGAC +
Preference number: 1 (lower is better)
Translates to: EVFVCGFAKQMSLVR*IFLLKSKSCRTHRD
Trigger: GTCCCTGTGTGTTCTGCAAGACTTGCTCTTGAGGAGGAAGATGCACCTCACTAAGCTCATCTGCTTAGCAAAGCCACAAACAAAAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 90 bp AAGAGGTGGGGTCGACATGATGAAATCCATTGTCCTGGAGGGGCCTaGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTCTT +
Preference number: 1 (lower is better)
Translates to: KRWGRHDEIHCPGGA*EAQWTLTTYSFLSL
Trigger: AAGAGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCGACCCCACCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 90 bp AATGCCCACTTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTaGAAAGACTCTGGAATTGGAGTATCCTACTCTTGCATTTCCTTT +
Preference number: 1 (lower is better)
Translates to: NAHFSDATLLVGLAS*KDSGIGVSYSCISF
Trigger: AAAGGAAATGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAAGTGGGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 90 bp GTATTGTTCACACACAAAAATAAATATTTACACGAATTCAAATGTTaGGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: VLFTHKNKYLHEFKC*VVLSRWGQMCGWLG
Trigger: CCCCAGCCATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGTAAATATTTATTTTTGTGTGTGAACAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 90 bp GTCCTTGGGAATAAACTGTCCTTTGTAAGAGTGGTGACGGTAAAATaGATTTCAGATGGGTTACACACACTATCACTTGTCTACCTGATG +
Preference number: 1 (lower is better)
Translates to: VLGNKLSFVRVVTVK*ISDGLHTLSLVYLM
Trigger: CATCAGGTAGACAAGTGATAGTGTGTGTAACCCATCTGAAATTCATTTTACCGTCACCACTCTTACAAAGGACAGTTTATTCCCAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 90 bp ACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGACTTaGAAGGTAATTATCTGGGGGTGGGATTCTAACATCAGGGTCCAC +
Preference number: 1 (lower is better)
Translates to: TLLFSINMQFCSPKT*KVIIWGWDSNIRVH
Trigger: GTGGACCCTGATGTTAGAATCCCACCCCCAGATAATTACCTTTCAAGTCTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
3UTR TCA 90 bp ATCAGTGTAGTGATATGGAATGTTAGGTATGGGGATACATCCTTCTaGTCAGACAGACACAGACTAGCAATCTGTACAAACACAAAAGAA +
Preference number: 1 (lower is better)
Translates to: ISVVIWNVRYGDTSF*SDRHRLAICTNTKE
Trigger: TTCTTTTGTGTTTGTACAGATTGCTAGTCTGTGTCTGTCTGATCAGAAGGATGTATCCCCATACCTAACATTCCATATCACTACACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGCCTGGCACCTGTCCTaGCCCTACTGGCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADAWHLS*PYWPQP
Trigger: GGGCTGGGGCCAGTAGGGGCAGGACAGGTGCCAGGC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGCTCAGGGCACATCCTaGAAAAAGCCCACGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAAQGTS*KKPTLE
Trigger: CTCCAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGTTGCGGGCCCGCTCCTaGAACTCAGGGAACTGCCGG +
Preference number: 2 (lower is better)
Translates to: LTGSCQDVFCHGRGQMGWLRARS*NSGNCR
Trigger: CCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAA...CCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR GCA 90 bp TGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCAACGTGCGGATGCGCTTaGGGGCCCGCTCCTGGAACT +
Preference number: 2 (lower is better)
Translates to: CFLPWPRSDGVAWVWSSPTCGCA*GPAPGT
Trigger: AGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGT...TGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CAA 90 bp CAGTGGCCACAGCTGCAACAGGCAATTGGCTGCAGAAAAGCTGGTTaGGGAAGGGGTGCCTGTTCTGGGAGCGAGTGGCTCTCCGTGGCC +
Preference number: 2 (lower is better)
Translates to: QWPQLQQAIGCRKAG*GRGACSGSEWLSVA
Trigger: GGCCACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACACAAGGGGATGGGAGCTaGAGCCCGCCCTGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTQGDGS*SPPWSS
Trigger: TGAGCTCCAGGGCGGGCTGCAGCTCCCATCCCCTTG...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GCCAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCTGGAACTCAGGGAACTaGCGGCTGCAGGACTCGATG +
Preference number: 2 (lower is better)
Translates to: ARMFSAMAEVRWGGVGLVWNSGN*RLQDSM
Trigger: CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCA...GACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR TCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTGCCCTGGGGGCCTGCTaGGGTCTGGGCGAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSALGAC*GLGESL
Trigger: CAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGC...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACACCCCTGGGGCCTCTCTaGTCTGAGGGAGGAAAGGCA +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTPLGPL*SEGGKA
Trigger: TGCCTTTCCTCCCTCAGAGCAGAGAGGCCCCAGGGG...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCATGTGGGCTGCTTGGAGATaGGCACCATGCGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: FSAMAEVRWGGVGLVISMWAAWR*APCGPG
Trigger: ACCTGGACCGCATGGTGCCCATCTCCAAGCAGCCCA...CATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR GCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGCAGCACTGGGATCTaGAACAGGATGGCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGSTGI*NRMAWP
Trigger: TGGCCAGGCCATCCTGTTGCAGATCCCAGTGCTGCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGCCTCCTGCTTGGCGTTaGCTAGGGAGGTGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMPPAWR*LGRCLV
Trigger: CACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGG...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGGGAGTCTGCCACAGTaGCGGGAGGCAGTGGCCACA +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAGSLPQ*REAVAT
Trigger: TGTGGCCACTGCCTCCCGGCACTGTGGCAGACTCCC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCCAGGTGCTTGGAGTGTaGCTAGAAACAGCTCTTTTG +
Preference number: 2 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAQVLGV*LETALL
Trigger: CAAAAGAGCTGTTTCTAGCCACACTCCAAGCACCTG...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGTGCAACAGGATGGCCTaGCCAAGGGCTAGCGGCCAC +
Preference number: 2 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMCNRMA*PRASGH
Trigger: GTGGCCGCTAGCCCTTGGCCAGGCCATCCTGTTGCA...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATTCAGACCTGGCTCCTaGGCAGCGGGGTGTGAGGGC +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLFRPGS*AAGCEG
Trigger: GCCCTCACACCCCGCTGCCCAGGAGCCAGGTCTGAA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAAGCTGCAGCCCGCCCTaGAGCTCACGGCTGCCTGAT +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLSCSPP*SSRLPD
Trigger: ATCAGGCAGCCGTGAGCTCCAGGGCGGGCTGCAGCT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAATGGCTACGGAGTGTTaGACGGAGAGGCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLMATEC*TERPWG
Trigger: CCCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCAT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGAGGAACAGCCAGCCTaGCACCTGTCCTGCCCCTAC +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLEEQPA*HLSCPY
Trigger: GTAGGGGCAGGACAGGTGCCAGGCTGGCTGTTCCTC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTTGCAACAGGATGGCCTaGCCAAGGGCTAGCGGCCAC +
Preference number: 2 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVCNRMA*PRASGH
Trigger: GTGGCCGCTAGCCCTTGGCCAGGCCATCCTGTTGCA...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGTCTGGGCGAGTCCCTaGTTTAGCAGCACTGGTAGG +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTVWASP*FSSTGR
Trigger: CCTACCAGTGCTGCTAAACCAGGGACTCGCCCAGAC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAAGTGCCGGGAGGCAGTaGCCACAGCTGCAACAGGCA +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLSAGRQ*PQLQQA
Trigger: TGCCTGTTGCAGCTGTGGCCACTGCCTCCCGGCACT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCCCTGGATCTTCTCCTTaGGCTGCTTGGAGATGGGCA +
Preference number: 2 (lower is better)
Translates to: MFSAMAEVRWGGVGLVISPGSSP*AAWRWA
Trigger: TGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGG...GGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR GCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGCCTTCCCTAGGGCAGTaGGCTCCAGGTGCCGGTGGG +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMPSLGQ*APGAGG
Trigger: CCCACCGGCACCTGGAGCGCACTGCCCTAGGGAAGG...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGCCTGGCACCTGTCCTaGCCCTACTGGCCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDAWHLS*PYWPQP
Trigger: GGGCTGGGGCCAGTAGGGGCAGGACAGGTGCCAGGC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCCAGAGCTGGAGGGCTaGAGTGGCTGGTTAGGGACA +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAPELEG*SGWLGT
Trigger: TGTCCCTAACCAGCCACTGCAGCCCTCCAGCTCTGG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACCTGGAGCTCACGGCTaGCTGATAGCCGGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEPGAHG*LIAGAH
Trigger: GTGAGCCCCGGCTATCAGGCAGCCGTGAGCTCCAGG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGGCACTGGAGGTTGTaGTGTGCTAAGGGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGHWRL*CAKGES
Trigger: AGACTCACCCTTAGCACAGCACAACCTCCAGTGCCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGCTCACCCTGAAGAAGTaGCCCCTCTTGGCAGGAGTG +
Preference number: 2 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMLTLKK*PLLAGV
Trigger: CACTCCTGCCAAGAGGGGCCACTTCTTCAGGGTGAG...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CAA 90 bp GTGAGGACTGGTAGATCTCTAGACGCATCCGCTTGGCTGCCTTTCTaGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGG +
Preference number: 2 (lower is better)
Translates to: VRTGRSLDASAWLPF*SRSHRQLPGCFLPW
Trigger: CCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGAGATCTACCAGTCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATGGTTTGGGAAGGGGTaGCTGTTCTGGGAGCGAGTG +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLWFGKG*LFWERV
Trigger: CACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGCTCAGGGCACATCCTaGAAAAAGCCCACGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLAQGTS*KKPTLE
Trigger: CTCCAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGATCCACTCGGCCCTaGCTCCCCTGGGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGSTRP*LPWGLS
Trigger: AGAGAGGCCCCAGGGGAGCCAGGGCCGAGTGGATCC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACAGAGGCCTGGGGATTaGTCAGATGGAAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLQRPGD*SDGRQR
Trigger: CCTCTGCCTTCCATCTGACCAATCCCCAGGCCTCTG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCATGCCGTTCTTCTTTTGTCATTGTCCTCATaGTCATCGTGGTCATCGTCG +
Preference number: 2 (lower is better)
Translates to: GRGQMGWRGSGHLHAVLLLSLSS*SSWSSS
Trigger: CGACGATGACCACGATGACCATGAGGACAATGACAA...AAGAAGAACGGCATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CAA 90 bp GTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTaGGGGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAA +
Preference number: 2 (lower is better)
Translates to: VWTYLPPRQTHCVGE*GLQLFRTGSGHILE
Trigger: TTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACCCCAACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTTGCCATGGGTGTGGGTaGGGTCCTCCTGCTTGGCGT +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRACHGCG*GPPAWR
Trigger: ACGCCAAGCAGGAGGACCTCACCCACACCCATGGCA...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACAGCCGGGGCTCACCCTaGAGAAGTGGCCCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDSRGSP*RSGPSW
Trigger: CCAAGAGGGGCCACTTCTTCAGGGTGAGCCCCGGCT...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTAGGGTGCACCAGGCATaGAGAGGAACAGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSRVHQA*RGTASL
Trigger: CAGGCTGGCTGTTCCTCTGCATGCCTGGTGCACCCT...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCATGGGTGAGGTCCTCCTaGTTGGCGTTGCCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: PGLAALVGIALSKRKCLSWVRSS*LALPRE
Trigger: CTCCCTAGGCAACGCCAAGCAGGAGGACCTCACCCA...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTGGGTGAGGTCCTCCTaGTTGGCGTTGCCTAGGGAG +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSWVRSS*LALPRE
Trigger: CTCCCTAGGCAACGCCAAGCAGGAGGACCTCACCCA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGCCCTGCCAACCGGCTaGCATCTCCCAGCAGTCCGT +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSALPTG*HLPAVR
Trigger: ACGGACTGCTGGGAGATGGCAGCCGGTTGGCAGGGC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTGAGGGGCCAGGCCTGTaGACAGAAGTTCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSEGPGL*TEVQTW
Trigger: CCAGGTCTGAACTTCTGTGCACAGGCCTGGCCCCTC...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCCTGGAGCTCACGGCTaGCTGATAGCCGGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIPGAHG*LIAGAH
Trigger: GTGAGCCCCGGCTATCAGGCAGCCGTGAGCTCCAGG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCAAGGGGATGGGAGCTaGAGCCCGCCCTGGAGCTCA +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGQGDGS*SPPWSS
Trigger: TGAGCTCCAGGGCGGGCTGCAGCTCCCATCCCCTTG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGGAGGAACAGCCAGCCTaGCACCTGTCCTGCCCCTAC +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMEEQPA*HLSCPY
Trigger: GTAGGGGCAGGACAGGTGCCAGGCTGGCTGTTCCTC...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGGATCTGCAACAGGATaGCCTGGCCAAGGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: PGLAALVGIALSKRKCLSGSATG*PGQGLA
Trigger: CGCTAGCCCTTGGCCAGGCCATCCTGTTGCAGATCC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAACAGAAGTTCAGACCTaGCTCCTGGGCAGCGGGGTG +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILETEVQT*LLGSGV
Trigger: CACCCCGCTGCCCAGGAGCCAGGTCTGAACTTCTGT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAGTGTGGGAGAGGCCTTaGGCACTGGAGGTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEVWERP*ALEVVL
Trigger: CAGCACAACCTCCAGTGCCCAAGGCCTCTCCCACAC...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCT +
Preference number: 2 (lower is better)
Translates to: MFSAMAEVRWGGVGLVISSSWSS*SSSSSS
Trigger: AGATGATGACGACGATGACCACGATGACCATGAGGA...GGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR TCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTGCCATGGGTGTGGGTaGGGTCCTCCTGCTTGGCGT +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGICHGCG*GPPAWR
Trigger: ACGCCAAGCAGGAGGACCTCACCCACACCCATGGCA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGAGGTAGAATACAGGTaGCCATGGACTGGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVEVEYR*PWTGAS
Trigger: AGAAGCCCCAGTCCATGGTCACCTGTATTCTACCTC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACAACCCTTCCAGAGCTaGCCCGTTGGCCTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEQPFQS*PVGLFQ
Trigger: TTGGAAGAGGCCAACGGGGCAGCTCTGGAAGGGTTG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTATGGCTACGGAGTGTTaGACGGAGAGGCCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIMATEC*TERPWG
Trigger: CCCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCAT...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCGGGCAGCAGAGAGCTaGTGTCATGGCTACGGAGTG +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRARAAES*CHGYGV
Trigger: CACTCCGTAGCCATGACAGCAGCTCTCTGCTGCCCG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACACCCTCCTAACTCCCTaGCTGTCCCCCTCCCCGTCA +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDTLLTP*LSPSPS
Trigger: TGACGGGGAGGGGGACAGGCAGGGAGTTAGGAGGGT...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGTCCTGCCCCTACTaGCCCCAGCCCACATCAGTG +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGLSCPY*PQPTSV
Trigger: CACTGATGTGGGCTGGGGCCAGTAGGGGCAGGACAG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTCTGGTGGTGTCCCTGTaGCAGCACTGGGATCTGCAA +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSLVVSL*QHWDLQ
Trigger: TTGCAGATCCCAGTGCTGCCACAGGGACACCACCAG...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGGACAGGACGCTCTCTaGGTTCCAGCTCCTGGACAC +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAGQDAL*VPAPGH
Trigger: GTGTCCAGGAGCTGGAACCCAGAGAGCGTCCTGTCC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGCTGGAGGGCTGCAGTaGCTGGTTAGGGACAGGACG +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGAGGLQ*LVRDRT
Trigger: CGTCCTGTCCCTAACCAGCCACTGCAGCCCTCCAGC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGCTGGAGGGCTGCAGTaGCTGGTTAGGGACAGGACG +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSAGGLQ*LVRDRT
Trigger: CGTCCTGTCCCTAACCAGCCACTGCAGCCCTCCAGC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCCTTTACTCCAAACATaGCGCAAGGGGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAPLLQT*RKGMGA
Trigger: AGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACACTCCAGGGATTATaGGTTTCTTCCAGGACCGGC +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLTLQGL*VSSRTG
Trigger: GCCGGTCCTGGAAGAAACCCATAATCCCTGGAGTGT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGGGCCTGCTGAGGTCTaGGCGAGTCCCTGGTTTAGC +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIGPAEV*ASPWFS
Trigger: GCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGGGCCTGCTGAGGTCTaGGCGAGTCCCTGGTTTAGC +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSGPAEV*ASPWFS
Trigger: GCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGGATCCACTCGGCCCTaGCTCCCCTGGGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKGSTRP*LPWGLS
Trigger: AGAGAGGCCCCAGGGGAGCCAGGGCCGAGTGGATCC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGAAGGGGTGCCTGTTCTaGGAGCGAGTGGCTCTCCGT +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMKGCLF*ERVALR
Trigger: ACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTT...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAGGTGGTGTGGCTGGATaGGGTATTGGAGGCCACTTG +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEGGVAG*GIGGHL
Trigger: CAAGTGGCCTCCAATACCCCATCCAGCCACACCACC...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGTGTGGGAGAGGCCTTaGGCACTGGAGGTTGTGCTG +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAVWERP*ALEVVL
Trigger: CAGCACAACCTCCAGTGCCCAAGGCCTCTCCCACAC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACATGCTCACCTAAGACTTaGAAGGTAATTATCTGGGGG +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTCSPKT*KVIIWG
Trigger: CCCCCAGATAATTACCTTTCAAGTCTTAGGTGAGCA...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGGGGGATACATCCTTCTaGTCAGACAGACACAGACTA +
Preference number: 2 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLGDTSF*SDRHRL
Trigger: TAGTCTGTGTCTGTCTGATCAGAAGGATGTATCCCC...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCCTTCCCTAGGGCAGTaGGCTCCAGGTGCCGGTGGG +
Preference number: 2 (lower is better)
Translates to: EEERVHFAFLNKYAILLTPSLGQ*APGAGG
Trigger: CCCACCGGCACCTGGAGCGCACTGCCCTAGGGAAGG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACAGGGTGCACCAGGCATaGAGAGGAACAGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDRVHQA*RGTASL
Trigger: CAGGCTGGCTGTTCCTCTGCATGCCTGGTGCACCCT...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCCAGAGCTGGAGGGCTaGAGTGGCTGGTTAGGGACA +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSPELEG*SGWLGT
Trigger: TGTCCCTAACCAGCCACTGCAGCCCTCCAGCTCTGG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGAGGGGCCAGGCCTGTaGACAGAAGTTCAGACCTGG +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIEGPGL*TEVQTW
Trigger: CCAGGTCTGAACTTCTGTGCACAGGCCTGGCCCCTC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCGGGCAGCAGAGAGCTaGTGTCATGGCTACGGAGTG +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSRAAES*CHGYGV
Trigger: CACTCCGTAGCCATGACAGCAGCTCTCTGCTGCCCG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCCAGAGCTGCCCCGTTaGCCTCTTCCAAGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGPELPR*PLPSRS
Trigger: TGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGGATCTGCAACAGGATaGCCTGGCCAAGGGCTAGCG +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGGSATG*PGQGLA
Trigger: CGCTAGCCCTTGGCCAGGCCATCCTGTTGCAGATCC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTCCCTGTGGCAGCACTaGGATCTGCAACAGGATGGC +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSSLWQH*DLQQDG
Trigger: GCCATCCTGTTGCAGATCCCAGTGCTGCCACAGGGA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACAGGTGACCATGGACTaGGGCTTCTGTAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEQVTMD*GFCRMG
Trigger: CCCCATTCTACAGAAGCCCCAGTCCATGGTCACCTG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTACAGAAGTTCAGACCTaGCTCCTGGGCAGCGGGGTG +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGITEVQT*LLGSGV
Trigger: CACCCCGCTGCCCAGGAGCCAGGTCTGAACTTCTGT...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTAGAGAGCTGCTGTCATaGCTACGGAGTGTTGCACGG +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSRELLS*LRSVAR
Trigger: CCGTGCAACACTCCGTAGCCATGACAGCAGCTCTCT...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGTGTTCTGGGAGCGAGTaGCTCTCCGTGGCCATCCTA +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMCSGSE*LSVAIL
Trigger: TAGGATGGCCACGGAGAGCCACTCGCTCCCAGAACA...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGATCTAATCCTTGTGTaGGTAGGGGGAGGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRADLILV*VGGGSP
Trigger: GGGGCTCCCTCCCCCTACCCACACAAGGATTAGATC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGAGGTAGAATACAGGTaGCCATGGACTGGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PGLAALVGIALSKRKCLSEVEYR*PWTGAS
Trigger: AGAAGCCCCAGTCCATGGTCACCTGTATTCTACCTC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGCCCACGCTGGAGTGTaGGGTAGAATACAGGTGACC +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSAHAGV*GRIQVT
Trigger: GGTCACCTGTATTCTACCTCACACTCCAGCGTGGGC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCAACCCTTCCAGAGCTaGCCCGTTGGCCTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIQPFQS*PVGLFQ
Trigger: TTGGAAGAGGCCAACGGGGCAGCTCTGGAAGGGTTG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTGGTTTGGGAAGGGGTaGCTGTTCTGGGAGCGAGTG +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIWFGKG*LFWERV
Trigger: CACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGCAGTGGCCACAGCTaGAACAGGCAATTGGCTGCA +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGSGHS*NRQLAA
Trigger: TGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTGCC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGTGGCGATTGTCTCTaGCAGGTTTTAACATTAAGA +
Preference number: 2 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGGDCL*QVLTLR
Trigger: TCTTAATGTTAAAACCTGGCAGAGACAATCGCCACC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTAAAGTCTCAGGTGCTTaGAGTGTGGCTAGAAACAGC +
Preference number: 2 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVKVSGA*SVARNS
Trigger: GCTGTTTCTAGCCACACTCCAAGCACCTGAGACTTT...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGTAATTATCTGGGGGTaGGATTCTAACATCAGGGTC +
Preference number: 2 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMVIIWG*DSNIRV
Trigger: GACCCTGATGTTAGAATCCCACCCCCAGATAATTAC...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGCTGTCCTGCCCCTACTaGCCCCAGCCCACATCAGTG +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKLSCPY*PQPTSV
Trigger: CACTGATGTGGGCTGGGGCCAGTAGGGGCAGGACAG...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTCCCTGTGGCAGCACTaGGATCTGCAACAGGATGGC +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGISLWQH*DLQQDG
Trigger: GCCATCCTGTTGCAGATCCCAGTGCTGCCACAGGGA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCATTGTGTGGGGGAGTTaGGGTTACAGCTGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAIVWGS*GYSCSE
Trigger: TTCTGAACAGCTGTAACCCCAACTCCCCCACACAAT...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGGGCAGACACATTGTGTaGGGGAGTTGGGGTTACAGC +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMGRHIV*GSWGYS
Trigger: GCTGTAACCCCAACTCCCCCACACAATGTGTCTGCC...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTCCTTTACTCCAAACATaGCGCAAGGGGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSPLLQT*RKGMGA
Trigger: AGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGG...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTTGGCTGCAGAAAAGCTaGTTTGGGAAGGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAWLQKS*FGKGCL
Trigger: CAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCA...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGTGGCTGCAGAAAAGCTaGTTTGGGAAGGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMWLQKS*FGKGCL
Trigger: CAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCA...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGCTGCAACAGGCAATTaGCTGCAGAAAAGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAAATGN*LQKSWF
Trigger: AAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGAGTGCCGGGAGGCAGTaGCCACAGCTGCAACAGGCA +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKSAGRQ*PQLQQA
Trigger: TGCCTGTTGCAGCTGTGGCCACTGCCTCCCGGCACT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGAAGTAAGCACGGGGTaGGCACCCTACCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAEVSTG*APYLSE
Trigger: CTCTGAAAGGTAGGGTGCCCACCCCGTGCTTACTTC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTGGATGGCTGGGGTGTaGGAGAGGCCTTGGGCACTG +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKWMAGV*ERPWAL
Trigger: CAGTGCCCAAGGCCTCTCCCACACCCCAGCCATCCA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGTAGTACTGAGCAGGTaGGGCCAGATGTGTGGATGG +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSVVLSR*GQMCGW
Trigger: CCATCCACACATCTGGCCCCACCTGCTCAGTACTAC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAAGCCCACCCAAGAGGTaGGGTCGACATGATGAAATC +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILESPPKR*GRHDEI
Trigger: GATTTCATCATGTCGACCCCACCTCTTGGGTGGGCT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTAAATGTACCAACTGGTaGGGCAGGAAGCCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAKCTNW*GRKPGP
Trigger: TGGACCTGGCTTCCTGCCTCACCAGTTGGTACATTT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATGCTCACCTAAGACTTaGAAGGTAATTATCTGGGGG +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLCSPKT*KVIIWG
Trigger: CCCCCAGATAATTACCTTTCAAGTCTTAGGTGAGCA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCAATGCCCACTTCTCTaGTGCTACCCTTCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSQCPLL*CYPSCG
Trigger: CCCACAAGAAGGGTAGCATCAGAGAAGTGGGCATTG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGGCACTGGAGGTTGTaGTGTGCTAAGGGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGHWRL*CAKGES
Trigger: AGACTCACCCTTAGCACAGCACAACCTCCAGTGCCC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTTGAACCTACGCTCTTaGCGCAGTACTAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSLNLRS*RSTKAG
Trigger: GCCTGCCTTAGTACTGCGGCAAGAGCGTAGGTTCAA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCCTGGTGGTGTCCCTGTaGCAGCACTGGGATCTGCAA +
Preference number: 2 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFLVVSL*QHWDLQ
Trigger: TTGCAGATCCCAGTGCTGCCACAGGGACACCACCAG...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCAGGTGACCATGGACTaGGGCTTCTGTAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGQVTMD*GFCRMG
Trigger: CCCCATTCTACAGAAGCCCCAGTCCATGGTCACCTG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCCTGGACACCCAGTCTaGACTTACTTACCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSPGHPV*TYLPPR
Trigger: CCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGAAGTAAGCACGGGGTaGGCACCCTACCTTTCAGAG +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSEVSTG*APYLSE
Trigger: CTCTGAAAGGTAGGGTGCCCACCCCGTGCTTACTTC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCACTGAGCCAGCTAAATaGAATCCTGTTTCCATGCAG +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGATEPAK*NPVSMQ
Trigger: CTGCATGGAAACAGGATTCCATTTAGCTGGCTCAGT...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGGTGGCGATTGTCTCTaGCAGGTTTTAACATTAAGA +
Preference number: 2 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLGGDCL*QVLTLR
Trigger: TCTTAATGTTAAAACCTGGCAGAGACAATCGCCACC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTTTGAACCTACGCTCTTaGCGCAGTACTAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSLNLRS*RSTKAG
Trigger: GCCTGCCTTAGTACTGCGGCAAGAGCGTAGGTTCAA...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCTCAAGAGCAAGTCTTaGAGAACACACAGGGACTGG +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSLKSKS*RTHRDW
Trigger: CCAGTCCCTGTGTGTTCTGCAAGACTTGCTCTTGAG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCCAGGAATTCTAGGGTaGCGATTGTCTCTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIPGILG*RLSLPG
Trigger: ACCTGGCAGAGACAATCGCCACCCTAGAATTCCTGG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGTTCATGTCTAGCTTaGGTACTGCCTCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGSCLA*VLPLGG
Trigger: TCCTCCCAGAGGCAGTACCCAAGCTAGACATGAACC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGTATTGGAGGCCACTTaGGAGATAACGACCACCCCC +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKVLEAT*EITTTP
Trigger: GGGGGTGGTCGTTATCTCTCAAGTGGCCTCCAATAC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCTCAGTTCCAACAGCTTaGACTCAGAAAAACATGACT +
Preference number: 2 (lower is better)
Translates to: GEGETAVSLVHQNQLFGASVPTA*TQKNMT
Trigger: AGTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGA...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGTAATTATCTGGGGGTaGGATTCTAACATCAGGGTC +
Preference number: 2 (lower is better)
Translates to: PGLAALVGIALSKRKCLSVIIWG*DSNIRV
Trigger: GACCCTGATGTTAGAATCCCACCCCCAGATAATTAC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGGGGCTTCTGTAGAATaGGGTCGGGGTGCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKGASVE*GRGASF
Trigger: AAAAGAGGCACCCCGACCCCATTCTACAGAAGCCCC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGATTGTGTGGGGGAGTTaGGGTTACAGCTGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMIVWGS*GYSCSE
Trigger: TTCTGAACAGCTGTAACCCCAACTCCCCCACACAAT...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGGCAGACACATTGTGTaGGGGAGTTGGGGTTACAGC +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKGRHIV*GSWGYS
Trigger: GCTGTAACCCCAACTCCCCCACACAATGTGTCTGCC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGAGAGGCCTTGGGCACTaGAGGTTGTGCTGTGCTAAG +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKRGLGH*RLCCAK
Trigger: CTTAGCACAGCACAACCTCCAGTGCCCAAGGCCTCT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGGGGATACATCCTTCTaGTCAGACAGACACAGACTA +
Preference number: 2 (lower is better)
Translates to: FSDATLLVGLASCKDSGIGDTSF*SDRHRL
Trigger: TAGTCTGTGTCTGTCTGATCAGAAGGATGTATCCCC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTAATGGACCACATAATTaGGGCATATGGGCCATCTAC +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSNGPHN*GIWAIY
Trigger: GTAGATGGCCCATATGCCTCAATTATGTGGTCCATT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGATTCTAAACAGAGCTaGAGCCCCAGCGCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKDSKQS*SPSALS
Trigger: TGACAAGGCGCTGGGGCTGCAGCTCTGTTTAGAATC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGAGCACTGGTAGGTATTaGACTGAGCAAGAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGSTGRY*TEQEEV
Trigger: CACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCAGGTGCTTGGAGTGTaGCTAGAAACAGCTCTTTTG +
Preference number: 2 (lower is better)
Translates to: NGILFPCRNLLLILPSLGQVLGV*LETALL
Trigger: CAAAAGAGCTGTTTCTAGCCACACTCCAAGCACCTG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGCTGCAACAGGCAATTaGCTGCAGAAAAGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSAATGN*LQKSWF
Trigger: AAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATCAGTTCCAACAGCTTaGACTCAGAAAAACATGACT +
Preference number: 2 (lower is better)
Translates to: KWPLGIGMDGFHLFEILESVPTA*TQKNMT
Trigger: AGTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTAAAGTATCAACCCTCTaGGTTCAAAGCAGCATTTTG +
Preference number: 2 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSKVSTL*VQSSIL
Trigger: CAAAATGCTGCTTTGAACTCAGAGGGTTGATACTTT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGAAAGTCTCAGGTGCTTaGAGTGTGGCTAGAAACAGC +
Preference number: 2 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKKVSGA*SVARNS
Trigger: GCTGTTTCTAGCCACACTCCAAGCACCTGAGACTTT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CAA 90 bp GGGATTAGCCTCCTGCAAAGACTCTGGAATTGGAGTATCCTACTCTaGCATTTCCTTTTTAACTTAGGATCCCAAATGATCACTTTGTGC +
Preference number: 2 (lower is better)
Translates to: GISLLQRLWNWSILL*HFLFNLGSQMITLC
Trigger: GCACAAAGTGATCATTTGGGATCCTAAGTTAAAAAGGAAATGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGCAGGAGGCTAATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp CAGCGGGGTGTGAGGGCAAGGGCCCTGCCAACCGGCTaGCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: QRGVRARALPTG*HLPAVRPVKQL
Trigger: CAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAGGGCCCTTGCCCTCACACCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCTCCAGAGCTGCCCCGTaGGCCTCTTCCAAGCAGGTC +
Preference number: 3 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRASRAAP*ASSKQV
Trigger: GACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGA...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGTGAGGTCCTCCTGCTaGGCGTTGCCTAGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAVRSSC*ALPREV
Trigger: CACCTCCCTAGGCAACGCCAAGCAGGAGGACCTCAC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp GCTGTCATGGCTACGGAGTGTTGCACGGAGAGGCCCTaGGGGCCTGCTGAGGTCTGGGCGAGTCCCTGGTTT +
Preference number: 3 (lower is better)
Translates to: AVMATECCTERP*GPAEVWASPWF
Trigger: AAACCAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCATGACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp TTGAGGTACGTGCGGATGCGCTTGCGGGCCCGCTCCTaGAACTCAGGGAACTGCCGGCTGCAGGACTCGATG +
Preference number: 3 (lower is better)
Translates to: LRYVRMRLRARS*NSGNCRLQDSM
Trigger: CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGTACCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR GCA 72 bp CCCTTTACTCCAAACATGGCGCAAGGGGATGGGAGCTaGAGCCCGCCCTGGAGCTCACGGCTGCCTGATAGC +
Preference number: 3 (lower is better)
Translates to: PFTPNMAQGDGS*SPPWSSRLPDS
Trigger: GCTATCAGGCAGCCGTGAGCTCCAGGGCGGGCTGCAGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp CTGGGGTGTGGGAGAGGCCTTGGGCACTGGAGGTTGTaGTGTGCTAAGGGTGAGTCTCAGGTGTCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: LGCGRGLGHWRL*CAKGESQVSWP
Trigger: GGGCCAGGACACCTGAGACTCACCCTTAGCACAGCACAACCTCCAGTGCCCAAGGCCTCTCCCACACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 72 bp TCTCCATGCCGTTCTTCTTCATGCGACGGCAGGACTTaGGGTACGTGCGGATGCGCTTGCGGGCCCGCTCCT +
Preference number: 3 (lower is better)
Translates to: SPCRSSSCDGRT*GTCGCACGPAP
Trigger: AGGAGCGGGCCCGCAAGCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCATGAAGAAGAACGGCATGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 72 bp CGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATaGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCA +
Preference number: 3 (lower is better)
Translates to: RSHRQLPGCFLP*PRSDGVAWVWS
Trigger: TGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR CAA 90 bp TTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCATGATGCGACGGCAGGACTaGAGGTACGTGCGGATGCGC +
Preference number: 3 (lower is better)
Translates to: FSAMAEVRWGGVGLVISMMRRQD*RYVRMR
Trigger: GCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCAT...CATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 72 bp AGGCCCTGGGGGCCTGCTGAGGTCTGGGCGAGTCCCTaGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAA +
Preference number: 3 (lower is better)
Translates to: RPWGPAEVWASP*FSSTGRYCTEQ
Trigger: TTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp TGCCGGGAGGCAGTGGCCACAGCTGCAACAGGCAATTaGCTGCAGAAAAGCTGGTTTGGGAAGGGGTGCCTG +
Preference number: 3 (lower is better)
Translates to: CREAVATAATGN*LQKSWFGKGCL
Trigger: CAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTGCCTCCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp GCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGATaGGGTGGCGTGGGTCTGGTCATCTCCATGCCGTTC +
Preference number: 3 (lower is better)
Translates to: AARMFSAMAEVR*GGVGLVISMPF
Trigger: GAACGGCATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR GCA 72 bp TGTTTTGCTTTGCCATGGGTGTGGGTGAGGTCCTCCTaGTTGGCGTTGCCTAGGGAGGTGCCTGGTGGTGTC +
Preference number: 3 (lower is better)
Translates to: CFALPWVWVRSS*LALPREVPGGV
Trigger: GACACCACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGGACCTCACCCACACCCATGGCAAAGCAAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp GGCAATTGGCTGCAGAAAAGCTGGTTTGGGAAGGGGTaGCTGTTCTGGGAGCGAGTGGCTCTCCGTGGCCAT +
Preference number: 3 (lower is better)
Translates to: GNWLQKSWFGKG*LFWERVALRGH
Trigger: ATGGCCACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCAATTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp GAGTCTGCCACAGTGCCGGGAGGCAGTGGCCACAGCTaGAACAGGCAATTGGCTGCAGAAAAGCTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: ESATVPGGSGHS*NRQLAAEKLVW
Trigger: CCAAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTGCCTCCCGGCACTGTGGCAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGGTGTGGGAGAGGCCTaGGGCACTGGAGGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAGVGEA*GTGGCA
Trigger: AGCACAACCTCCAGTGCCCAAGGCCTCTCCCACACC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp TGGTTAGGGACAGGACGCTCTCTGGGTTCCAGCTCCTaGACACCCAGTCTGGACTTACTTACCTCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: WLGTGRSLGSSS*TPSLDLLTSQA
Trigger: TGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAGAGAGCGTCCTGTCCCTAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp GAGCCGCTGAGACGCAGCGTGTATTGCACACCTGTCTaGACTAGCCTTTTCCAAGGCTCAGTAGCCGTCCTT +
Preference number: 3 (lower is better)
Translates to: EPLRRSVYCTPV*TSLFQGSVAVL
Trigger: AAGGACGGCTACTGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATACACGCTGCGTCTCAGCGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
3UTR GCA 72 bp CTTGGCTGCCTTTCTTGTCTCGCTCTCACAGGCAGCTaGCAGGATGTTTTCTGCCATGGCCGAGGTCAGATG +
Preference number: 3 (lower is better)
Translates to: LGCLSCLALTGS*QDVFCHGRGQM
Trigger: CATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 72 bp GACGCTCTCTGGGTTCCAGCTCCTGGACACCCAGTCTaGACTTACTTACCTCCCAGGCAGACACATTGTGTG +
Preference number: 3 (lower is better)
Translates to: DALWVPAPGHPV*TYLPPRQTHCV
Trigger: CACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAGAGAGCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp GAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGG +
Preference number: 3 (lower is better)
Translates to: ESFILSLSSWSS*SSSSSSAVGAR
Trigger: CCGGGCCCCGACGGCAGATGATGACGACGATGACCACGATGACCATGAGGACAATGACAAGATGAACGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 72 bp CAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTaGCGTGGGTCTGGTCATCTCCATGCCGTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: QDVFCHGRGQMG*RGSGHLHAVLL
Trigger: AAGAAGAACGGCATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCATCCAGAGCTGCCCCGTaGGCCTCTTCCAAGCAGGTC +
Preference number: 3 (lower is better)
Translates to: PGLAALVGIALSKRKCLSSRAAP*ASSKQV
Trigger: GACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGA...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp GGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCATGCCGTTCTTCTTAGACGCACAAACATGTaGAAGGCCTTAAGACGCTCA +
Preference number: 3 (lower is better)
Translates to: GRGQMGWRGSGHLHAVLLRRTNM*KALRRS
Trigger: TGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCT...AAGAAGAACGGCATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR TCA 72 bp TCAGGGCACATCCTGGAAAAAGCCCACGCTGGAGTGTaGGGTAGAATACAGGTGACCATGGACTGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: SGHILEKAHAGV*GRIQVTMDWGF
Trigger: GAAGCCCCAGTCCATGGTCACCTGTATTCTACCTCACACTCCAGCGTGGGCTTTTTCCAGGATGTGCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCATGGCTACGGAGTGTaGCACGGAGAGGCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: FSDATLLVGLASCKDSGIHGYGV*HGEALG
Trigger: CCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCATG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 72 bp GTCTTAGGAGAACCCAAGTGGCTCCTCCACTTCCACTaGTCCCTTTACTCCAAACATGGCGCAAGGGGATGG +
Preference number: 3 (lower is better)
Translates to: VLGEPKWLLHFH*SLYSKHGARGW
Trigger: CCATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCACTTGGGTTCTCCTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp TTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTATTaGACACCTGTCTGCACTAGCCTTTTCCAAGGCTCA +
Preference number: 3 (lower is better)
Translates to: FFPTEPLRRSVY*TPVCTSLFQGS
Trigger: TGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATACACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
3UTR CCA 72 bp GTAGTTTCACTGGAAAGGAGGAGCCCACCCAAGAGGTaGGGTCGACATGATGAAATCCATTGTCCTGGAGGG +
Preference number: 3 (lower is better)
Translates to: VVSLERRSPPKR*GRHDEIHCPGG
Trigger: CCCTCCAGGACAATGGATTTCATCATGTCGACCCCACCTCTTGGGTGGGCTCCTCCTTTCCAGTGAAACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTCCTCCTGCTTGGCGTaGCCTAGGGAGGTGCCTGGT +
Preference number: 3 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDSSCLA*PREVPG
Trigger: ACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGGA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGGTGCCTCTTTTGTTTaGCTTTGCCATGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVGASFV*LCHGCG
Trigger: CCCACACCCATGGCAAAGCAAAACAAAAGAGGCACC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATCCCAGGCAGACACATaGTGTGGGGGAGTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: KWPLGIGMDGFHLFEILESQADT*CGGVGV
Trigger: AACCCCAACTCCCCCACACAATGTGTCTGCCTGGGA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp CTTGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCTCAGAGTCGTTCATCTaGTCATTGTCCTCATGGTCA +
Preference number: 3 (lower is better)
Translates to: LVSLSQAAARMFSAMAEVSESFI*SLSSWS
Trigger: TGACCATGAGGACAATGACAAGATGAACGACTCTGA...GACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
3UTR CCA 72 bp TTGAACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTaGAGGGTGGTCAGTTCCAACAGCTTGAACTCAGAA +
Preference number: 3 (lower is better)
Translates to: LNLRSCRSTKAG*RVVSSNSLNSE
Trigger: TTCTGAGTTCAAGCTGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTCCCAGGCAGACACATaGTGTGGGGGAGTTGGGGTT +
Preference number: 3 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSSQADT*CGGVGV
Trigger: AACCCCAACTCCCCCACACAATGTGTCTGCCTGGGA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGTGAGGTCCTCCTGCTaGGCGTTGCCTAGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKVRSSC*ALPREV
Trigger: CACCTCCCTAGGCAACGCCAAGCAGGAGGACCTCAC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACATTGTGTGGGGGAGTaGGGGTTACAGCTGTTCAGA +
Preference number: 3 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEHCVGE*GLQLFR
Trigger: TCTGAACAGCTGTAACCCCAACTCCCCCACACAATG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGAAGAAGTGGCCCCTCTaGGCAGGAGTGAGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: NGILFPCRNLLLILPSLGKKWPL*AGVSLR
Trigger: CCTCAGACTCACTCCTGCCAAGAGGGGCCACTTCTT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGGTGTGGGAGAGGCCTaGGGCACTGGAGGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKGVGEA*GTGGCA
Trigger: AGCACAACCTCCAGTGCCCAAGGCCTCTCCCACACC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAATTCTAGGGTGGCGATaGTCTCTGCCAGGTTTTAAC +
Preference number: 3 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLILGWR*SLPGFN
Trigger: GTTAAAACCTGGCAGAGACAATCGCCACCCTAGAAT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCTCTCTTGAAAACACATaGAACCTACGCTCTTGCCGC +
Preference number: 3 (lower is better)
Translates to: GEGETAVSLVHQNQLFGASLENT*NLRSCR
Trigger: GCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGA...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTATCAGAACCAGCTCTTaGGTGCCCTCCAAGTCGGGA +
Preference number: 3 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSIRTSS*VPSKSG
Trigger: TCCCGACTTGGAGGGCACCAAAGAGCTGGTTCTGAT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp TTAGTGAGGTGCATCTTCCTCCTCAAGAGCAAGTCTTaGAGAACACACAGGGACTGGGGGCATCTGTACATG +
Preference number: 3 (lower is better)
Translates to: LVRCIFLLKSKS*RTHRDWGHLYM
Trigger: CATGTACAGATGCCCCCAGTCCCTGTGTGTTCTGCAAGACTTGCTCTTGAGGAGGAAGATGCACCTCACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp GAACTACATTCATCCCACAGCTCTGCAGCAAAGTCCTaGCTTCCCTTTTCCTCTGTCCATGCAGTTACCCAC +
Preference number: 3 (lower is better)
Translates to: ELHSSHSSAAKS*LPFSSVHAVTH
Trigger: GTGGGTAACTGCATGGACAGAGGAAAAGGGAAGGCAGGACTTTGCTGCAGAGCTGTGGGATGAATGTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp GTGTCCTTGTGCCCAAAGTCTCAGGTGCTTGGAGTGTaGCTAGAAACAGCTCTTTTGGATCCCACCTCTTTC +
Preference number: 3 (lower is better)
Translates to: VSLCPKSQVLGV*LETALLDPTSF
Trigger: GAAAGAGGTGGGATCCAAAAGAGCTGTTTCTAGCCACACTCCAAGCACCTGAGACTTTGGGCACAAGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp TGCCCTGAGGCCCTTCAGAAGATTTTTAAATGGCTGTaGGACAAGGGCTTTGGGAGCTCCTTTTGGGAGAAG +
Preference number: 3 (lower is better)
Translates to: CPEALQKIFKWL*DKGFGSSFWEK
Trigger: CTTCTCCCAAAAGGAGCTCCCAAAGCCCTTGTCCCACAGCCATTTAAAAATCTTCTGAAGGGCCTCAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGTATTGGAGGCCACTaGAGAGATAACGACCACCCC +
Preference number: 3 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGIGGH*RDNDHP
Trigger: GGGGTGGTCGTTATCTCTCAAGTGGCCTCCAATACC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp CTTCCCCAGTCTTTCTCACTCCTGTCTGCCAAGAAATaGAAACGGTTCATGTCTAGCTTGGGTACTGCCTCT +
Preference number: 3 (lower is better)
Translates to: LPQSFSLLSAKK*KRFMSSLGTAS
Trigger: AGAGGCAGTACCCAAGCTAGACATGAACCGTTTGCATTTCTTGGCAGACAGGAGTGAGAAAGACTGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCTCTTTTGTTTTGCTTaGCCATGGGTGTGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: WNPVSMQKLAPDSAISRALFCFA*PWVWVR
Trigger: CCTCACCCACACCCATGGCAAAGCAAAACAAAAGAG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGGTGCCTCTTTTGTTTaGCTTTGCCATGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: NGILFPCRNLLLILPSLGGASFV*LCHGCG
Trigger: CCCACACCCATGGCAAAGCAAAACAAAAGAGGCACC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCATTGTGTGGGGGAGTaGGGGTTACAGCTGTTCAGA +
Preference number: 3 (lower is better)
Translates to: FSDATLLVGLASCKDSGIHCVGE*GLQLFR
Trigger: TCTGAACAGCTGTAACCCCAACTCCCCCACACAATG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp GGTCGACATGATGAAATCCATTGTCCTGGAGGGGCCTaGGAGGCCCAATGGACTTTAACAACATATTCTTTC +
Preference number: 3 (lower is better)
Translates to: GRHDEIHCPGGA*EAQWTLTTYSF
Trigger: GAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCTCTTTTGTTTTGCTTaGCCATGGGTGTGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSLFCFA*PWVWVR
Trigger: CCTCACCCACACCCATGGCAAAGCAAAACAAAAGAG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTATTCTAGGGTGGCGATaGTCTCTGCCAGGTTTTAAC +
Preference number: 3 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSILGWR*SLPGFN
Trigger: GTTAAAACCTGGCAGAGACAATCGCCACCCTAGAAT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCAGTTGTAAGTGGCCCTaGGGAATAGGGATGGATGGG +
Preference number: 3 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFSCKWP*GIGMDG
Trigger: CCCATCCATCCCTATTCCCAAGGGCCACTTACAACT...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGCAAAGACTCTGGAATaGGAGTATCCTACTCTTGCA +
Preference number: 3 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDAKTLE*EYPTLA
Trigger: TGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGTCAGTTCCAACAGCTaGAACTCAGAAAAACATGAC +
Preference number: 3 (lower is better)
Translates to: NGILFPCRNLLLILPSLGVSSNS*NSEKHD
Trigger: GTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGAC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGCAAAGACTCTGGAATaGGAGTATCCTACTCTTGCA +
Preference number: 3 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFAKTLE*EYPTLA
Trigger: TGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR GCA 72 bp CCCCAGAGGAACCCTGAAGAAATGGCTTGTACTATCTaGACTGAAAGTCTTAAATCTCATCTCAGATATGGA +
Preference number: 3 (lower is better)
Translates to: PQRNPEEMACTI*TESLKSHLRYG
Trigger: TCCATATCTGAGATGAGATTTAAGACTTTCAGTGCAGATAGTACAAGCCATTTCTTCAGGGTTCCTCTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp AAAAGCAAAACAAGTTCCCTGACTGAGCCAGCTAAATaGAATCCTGTTTCCATGCAGAAACTTGCTCCTGAT +
Preference number: 3 (lower is better)
Translates to: KSKTSSLTEPAK*NPVSMQKLAPD
Trigger: ATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATTTAGCTGGCTCAGTCAGGGAACTTGTTTTGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp TACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTaGAATTGGAGTATCCTACTCTTGCATTTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: YPSCGISLLQRL*NWSILLLHFLF
Trigger: AAAAAGGAAATGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGACACGAATTCAAATGTaGAGTAGTACTGAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKTRIQM*SSTEQV
Trigger: CACCTGCTCAGTACTACTCAACATTTGAATTCGTGT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR-3UTR CAA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCAAAAGTGAGAGGTTTTaGTTTGTGGCTTTGCTAAGC +
Preference number: 3 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFKSERF*FVALLS
Trigger: GCTTAGCAAAGCCACAAACAAAAACCTCTCACTTTT...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 72 bp GTGATATGGAATGTTAGGTATGGGGATACATCCTTCTaGTCAGACAGACACAGACTAGCAATCTGTACAAAC +
Preference number: 3 (lower is better)
Translates to: VIWNVRYGDTSF*SDRHRLAICTN
Trigger: GTTTGTACAGATTGCTAGTCTGTGTCTGTCTGATCAGAAGGATGTATCCCCATACCTAACATTCCATATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR TCA 72 bp ACTCAGAAAAACATGACTTCAAACTGTAGCTTATGCTaGTCTTTAGATCTAATCCTTGTGTGGGTAGGGGGA +
Preference number: 3 (lower is better)
Translates to: TQKNMTSNCSLC*SLDLILVWVGG
Trigger: TCCCCCTACCCACACAAGGATTAGATCTAAAGATCAGCATAAGCTACAGTTTGAAGTCATGTTTTTCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp TCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTaGAGTATCCTACTCTTGCATTTCCTTTTTAACTTA +
Preference number: 3 (lower is better)
Translates to: SCGISLLQRLWN*SILLLHFLFNL
Trigger: TAAGTTAAAAAGGAAATGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CCA 72 bp AGAGGTGAAGCCATTAATAGAGTCACCTTTAAAAGTTaGTGCCATCCACTGTTTGCCTTAAGTGCTTACTAT +
Preference number: 3 (lower is better)
Translates to: RGEAINRVTFKS*CHPLFALSAYY
Trigger: ATAGTAAGCACTTAAGGCAAACAGTGGATGGCACCAACTTTTAAAGGTGACTCTATTAATGGCTTCACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CGTGCGGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAAGGGGTAGGAGGCTGTaGCAAGTGCCGTGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RADALAGPLLELRELPAARGRRL*QVPWPA
Trigger: CGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCT...TGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CGTGCGGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGGCCACGGCGCCGTTaGCATTCATCTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RADALAGPLLELRELPAAGPRRR*HSSRGR
Trigger: CCTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCC...TGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp GCGGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGACTGTGCCAAGTGCCGTaGCCGGCGGGAGCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ADALAGPLLELRELPAAGLCQVP*PAGACH
Trigger: GTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAG...TCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp GGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGACTCGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GCACGPAPGTQGTAGCRTRILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...AGTCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCCAGGGTCGCCCTGCGTaGTGCTCGACGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAQGRPA*CSTWMG
Trigger: ACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTG...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGCCTGGCACCTGTCCTaGCCCTACTGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGAWHLS*PYWPQP
Trigger: GGGCTGGGGCCAGTAGGGGCAGGACAGGTGCCAGGC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCTCTTCACCCCGTATTTaGCGCGGCTCCGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRASSPRI*RGSAAR
Trigger: ACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGA...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGCGGAGTCCCGCGAGTaGTGCTTGTCCAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAAESRE*CLSRAM
Trigger: CATAGCCCTGGACAAGCAGCACTCGCGGGACTCCGC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTCCTTCCCTAGGGCAGTaGGCTCCAGGTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGPSLGQ*APGAGG
Trigger: CCCACCGGCACCTGGAGCGCACTGCCCTAGGGAAGG...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GCGGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGATCAGATGGGGTGGCGTaGGTCTGGTCATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: ADALAGPLLELRELPAAGSDGVA*VWSSPC
Trigger: GCATGGAGATGACCAGACCCACGCCACCCCATCTGA...TCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp CGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGACTCGATGGAGTCATCGTCCTCTTaGCTGTGGAGGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RLRARSWNSGNCRLQDSMESSSS*LWRFCG
Trigger: CCCGCAGAACCTCCACAGTCAAGAGGACGATGACTC...CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTCAGGGTCGCCCTGCGTaGTGCTCGACGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGQGRPA*CSTWMG
Trigger: ACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTG...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGACTTGGAGATGGGCACCATaGGGTCCAGGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GCACGPAPGTQGTAGCRTWRWAP*GPGSRP
Trigger: TGGACGAGAACCTGGACCGCATGGTGCCCATCTCCA...AGTCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp GGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGACTTGGAACTCAGGGAACTaGCGGCTGCAGGACTCGATG +
Preference number: 4 (lower is better)
Translates to: GCACGPAPGTQGTAGCRTWNSGN*RLQDSM
Trigger: CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCA...AGTCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGCAGTGCGCTCCAGGTaGCGGTGGGGTCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGAVRSR*RWGQFC
Trigger: GCAGAACTGACCCCACCGGCACCTGGAGCGCACTGC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGAGGGCTGCAGTGGCTaGTTAGGGACAGGACGCTCT +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAEGCSG*LGTGRS
Trigger: AGAGCGTCCTGTCCCTAACCAGCCACTGCAGCCCTC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTTTCAGACCTGGCTCCTaGGCAGCGGGGTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGFRPGS*AAGCEG
Trigger: GCCCTCACACCCCGCTGCCCAGGAGCCAGGTCTGAA...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCCTCGGCGGCCGTGGTaGAGTCCATGGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLPRRPW*SPWGPR
Trigger: CCGTGGCCCCCATGGACTTCACCACGGCCGCCGAGG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTACGTGCGGATGCGCTTaGGGGCCCGCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SCQDVFCHGRGQMGWRGSTCGCA*GPAPGT
Trigger: AGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGT...AGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CGTGCGGATGCGCTTGCGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGCTCTCACAGGCAGCTaGCAGGATGTTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RADALAGPLLELRELPAAALTGS*QDVFCH
Trigger: ATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGC...TGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTATGGCTACGGAGTGTTaGACGGAGAGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGMATEC*TERPWG
Trigger: CCCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCAT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGCTGCTCGACGTGGATaGGTTCAGGGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGAARRG*VQGGGA
Trigger: GGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATCGTGGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGGCCCACTGTCAGGTCCGAGGTCAGATGGGGTaGCGTGGGTCTGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: IVVIVVIICRRGPAHCQVRGQMG*RGSGHL
Trigger: GAGATGACCAGACCCACGCCACCCCATCTGACCTCG...GACCTGACAGTGGGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACATGGGCACGGGCCTGCTaGTGCTGGTGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTWARAC*CWCWRG
Trigger: CCCCCTCCAGCACCAGCACCAGCAGGCCCGTGCCCA...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTTGCAACAGGATGGCCTaGCCAAGGGCTAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGCNRMA*PRASGH
Trigger: GTGGCCGCTAGCCCTTGGCCAGGCCATCCTGTTGCA...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGATCTAATCCTTGTGTaGGTAGGGGGAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRADLILV*VGGGSP
Trigger: GGGGCTCCCTCCCCCTACCCACACAAGGATTAGATC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTCCTCGGCGGCCGTGGTaGAGTCCATGGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVPRRPW*SPWGPR
Trigger: CCGTGGCCCCCATGGACTTCACCACGGCCGCCGAGG...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCATGCACAGGTTGATGGGCTaGTCCTCGGCGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: FSAMAEVRWGGVGLVISMHRLMG*SSAAVV
Trigger: CACCACGGCCGCCGAGGATCAGCCCATCAACCTGTG...CATGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp TGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGCAGGGTCGCCCTGCGTaGTGCTCGACGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: CLALTGSCQDVFCHGRGQQGRPA*CSTWMG
Trigger: ACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTG...CTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGGCAGCACTGGGATCTaGAACAGGATGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGGSTGI*NRMAWP
Trigger: TGGCCAGGCCATCCTGTTGCAGATCCCAGTGCTGCC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGGATGTTTTCTGCCATaGCCGAGGTCAGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAGCFLP*PRSDGV
Trigger: CACCCCATCTGACCTCGGCCATGGCAGAAAACATCC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACGGGCCTGCTGGTGCTaGTGCTGGAGGGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLRACWC*CWRGWA
Trigger: CGCCCACCCCCTCCAGCACCAGCACCAGCAGGCCCG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTGGGCACGGGCCTGCTaGTGCTGGTGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLWARAC*CWCWRG
Trigger: CCCCCTCCAGCACCAGCACCAGCAGGCCCGTGCCCA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CAA 72 bp TGGCTGGGGTGTGGGAGAGGCCTTGGGCACTGGAGGTaGTGCTGTGCTAAGGGTGAGTCTCAGGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WLGCGRGLGHWR*CCAKGESQVSW
Trigger: CCAGGACACCTGAGACTCACCCTTAGCACAGCACAACCTCCAGTGCCCAAGGCCTCTCCCACACCCCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CAA 72 bp ATCTCCATGCCGTTCTTCTTCATGCGACGGCAGGACTaGAGGTACGTGCGGATGCGCTTGCGGGCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: ISMPFFFMRRQD*RYVRMRLRARS
Trigger: GGAGCGGGCCCGCAAGCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCATGAAGAAGAACGGCATGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp AGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTCAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SCQDVFCHGRGQMGWRGSQVRVS*HPCGVA
Trigger: AGCGACTCCACATGGATGTCAGCTGACCCGCACCTG...AGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp ATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCTCTTCACCCCGTATTTaGCGCGGCTCCGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: MFSAMAEVRWGGVGLVISSSPRI*RGSAAR
Trigger: ACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGA...GGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp CAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATTGCGACGGCAGGACTTaGGGTACGTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: QDVFCHGRGQMGWRGSGHCDGRT*GTCGCA
Trigger: AGCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCA...ATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGTCGCCCTGCGTGCTaGTCGACGTGGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LSQAAARMFSAMAEVRWGGRPAC*STWMGS
Trigger: TGAACCCATCCACGTCGAGCAGCACGCAGGGCGACC...ACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAGGGGTAGGAGGCTGTaGCAAGTGCCGTGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMRGRRL*QVPWPA
Trigger: CGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGAGGGGTAGGAGGCTGTaGCAAGTGCCGTGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVRGRRL*QVPWPA
Trigger: CGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCT...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCGGTGGGCACGGGCCTaGTGGTGCTGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGARWARA*WCWCWR
Trigger: CCTCCAGCACCAGCACCAGCAGGCCCGTGCCCACCG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGCCTGGCACCTGTCCTaGCCCTACTGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLAWHLS*PYWPQP
Trigger: GGGCTGGGGCCAGTAGGGGCAGGACAGGTGCCAGGC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACATCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTSSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCAGCTGCTCGACGTGGATaGGTTCAGGGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CFLPWPRSDGVAWVWSSPAARRG*VQGGGA
Trigger: GGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGC...TGGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp GTCCTCATGGTCATCGTGGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGGCCGACTCGATGATGGCCTaGATCTTCTCCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLMVIVVIVVIICRRGPADSMMA*IFSLGC
Trigger: GCAGCCCAAGGAGAAGATCCAGGCCATCATCGAGTC...GGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGATGACCATGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp CAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATATGGCCGAGGTCAGATaGGGTGGCGTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: QDVFCHGRGQMGWRGSGHMAEVR*GGVGLV
Trigger: GACCAGACCCACGCCACCCCATCTGACCTCGGCCAT...ATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACATGGCCGAGGTCAGATaGGGTGGCGTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADMAEVR*GGVGLV
Trigger: GACCAGACCCACGCCACCCCATCTGACCTCGGCCAT...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACCGCTCCAGGTGCCGGTaGGGTCAGTTCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADRSRCR*GQFCCR
Trigger: CCTACAGCAGAACTGACCCCACCGGCACCTGGAGCG...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTTCCCTGTGGCAGCACTaGGATCTGCAACAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGSLWQH*DLQQDG
Trigger: GCCATCCTGTTGCAGATCCCAGTGCTGCCACAGGGA...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGCATGGCGCAAGGGGATaGGAGCTGCAGCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMHGARG*ELQPAL
Trigger: CAGGGCGGGCTGCAGCTCCCATCCCCTTGCGCCATG...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACTGGATGGCTGGGGTGTaGGAGAGGCCTTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADWMAGV*ERPWAL
Trigger: CAGTGCCCAAGGCCTCTCCCACACCCCAGCCATCCA...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCACCAGTCCCGGAACTaGCGGCCCAGCTCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVHQSRN*RPSSES
Trigger: GGACTCGGAGCTGGGCCGCCAGTTCCGGGACTGGTG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR TCA 90 bp CAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGTCCTCGGCGGCCGTGGTaGAGTCCATGGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QGPCLQSRSSCHCPHGHRPRRPW*SPWGPR
Trigger: CCGTGGCCCCCATGGACTTCACCACGGCCGCCGAGG...ACGATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAGCCGGGGCTCACCCTaGAGAAGTGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMSRGSP*RSGPSW
Trigger: CCAAGAGGGGCCACTTCTTCAGGGTGAGCCCCGGCT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCTCCGACAGGCCATCTaGCCCCGAGCCCGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVLRQAI*PRARLD
Trigger: GTCAAGACGGGCTCGGGGGCAGATGGCCTGTCGGAG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGGAGGCTGTGCCAAGTaGCGTGGCCGGCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVGGCAK*RGRREL
Trigger: AAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGGGAGTGGGTGATGGCTaGGGAGTCCCGCGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLGVGDG*GVPRVL
Trigger: CAGCACTCGCGGGACTCCGCAGCCATCACCCACTCC...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCCTGGAGCTCACGGCTaGCTGATAGCCGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVPGAHG*LIAGAH
Trigger: GTGAGCCCCGGCTATCAGGCAGCCGTGAGCTCCAGG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCCTGGAGCTCACGGCTaGCTGATAGCCGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLPGAHG*LIAGAH
Trigger: GTGAGCCCCGGCTATCAGGCAGCCGTGAGCTCCAGG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGGGAGTCTGCCACAGTaGCGGGAGGCAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVGSLPQ*REAVAT
Trigger: TGTGGCCACTGCCTCCCGGCACTGTGGCAGACTCCC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGAGGCTCGTTTTCTTTaGGTTCCAGGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAEARFL*VPGHWS
Trigger: ACTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp TCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SELRYFTFFFPTEPLRRSGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...GCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGCGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMRILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGAGGCCTTGGGACAGGTaGCTCAAGCGGTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ELRYFTFFFPTEPLRRSVRPWDR*LKRWGP
Trigger: CGGGCCCCACCGCTTGAGCCACCTGTCCCAAGGCCT...CACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACCGAGGTCAGATGGGGTaGCGTGGGTCTGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADRGQMG*RGSGHL
Trigger: GAGATGACCAGACCCACGCCACCCCATCTGACCTCG...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGGATCTGCAACAGGATaGCCTGGCCAAGGGCTAGCG +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADGSATG*PGQGLA
Trigger: CGCTAGCCCTTGGCCAGGCCATCCTGTTGCAGATCC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTCAGGTGACCATGGACTaGGGCTTCTGTAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGQVTMD*GFCRMG
Trigger: CCCCATTCTACAGAAGCCCCAGTCCATGGTCACCTG...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGGATCCACTCGGCCCTaGCTCCCCTGGGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAGSTRP*LPWGLS
Trigger: AGAGAGGCCCCAGGGGAGCCAGGGCCGAGTGGATCC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGAGACGCAGCGTGTATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCACTCTGTCTGCTACTCTaGCGACCCGCCTCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LRRSVYCTPVCTSLFQGSLCLLL*RPASRG
Trigger: GCCCCGGGAGGCGGGTCGCCAGAGTAGCAGACAGAG...TGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATACACGCTGCGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACACAGGTTGATGGGCTaGTCCTCGGCGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLHRLMG*SSAAVV
Trigger: CACCACGGCCGCCGAGGATCAGCCCATCAACCTGTG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTGCGACGGCAGGACTTaGGGTACGTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLCDGRT*GTCGCA
Trigger: AGCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCCCCGCCTTTCATGCTaGGGTCCGTGGGCCCATTAC +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVPRLSC*GPWAHY
Trigger: GTAATGGGCCCACGGACCTCAGCATGAAAGGCGGGG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTGCCATGGGTGTGGGTaGGGTCCTCCTGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLCHGCG*GPPAWR
Trigger: ACGCCAAGCAGGAGGACCTCACCCACACCCATGGCA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGCCCACGCTGGAGTGTaGGGTAGAATACAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADAHAGV*GRIQVT
Trigger: GGTCACCTGTATTCTACCTCACACTCCAGCGTGGGC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGGAGGTGGGACCTCATaGAGGAGCTGCCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAGGGTS*RSCPQR
Trigger: CCTCTGGGGGCAGCTCCTTCATGAGGTCCCACCTCC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGGAGGTGGGACCTCATaGAGGAGCTGCCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVGGGTS*RSCPQR
Trigger: CCTCTGGGGGCAGCTCCTTCATGAGGTCCCACCTCC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTACGTGCGGATGCGCTTaGGGGCCCGCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVTCGCA*GPAPGT
Trigger: AGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGT...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCAGGGGGCTGCAGGTTaGTGCTCAAGGCCCCGTACC +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAQGAAG*CSRPRT
Trigger: GGTACGGGGCCTTGAGCAGCAACCTGCAGCCCCCTG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCCCCTGGGGCCTCTCTaGTCTGAGGGAGGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLPLGPL*SEGGKA
Trigger: TGCCTTTCCTCCCTCAGAGCAGAGAGGCCCCAGGGG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGACCCTCCTAACTCCCTaGCTGTCCCCCTCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLTLLTP*LSPSPS
Trigger: TGACGGGGAGGGGGACAGGCAGGGAGTTAGGAGGGT...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCACTTGGCCCATCTTaGGTTCCCGGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCPLGPS*VPGRCP
Trigger: TGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGG...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp CAGGATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATACAGAAGTCTCATCCTaGGCTGGAAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: QDVFCHGRGQMGWRGSGHTEVSS*AGSEAE
Trigger: CTCCGCCTCGCTTCCAGCCCAGGATGAGACTTCTGT...ATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp AAAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCTTCGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KETHKHVEGLKTLRVHAFGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...GAAGGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp TATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGTAGCCGTCCTTGGCCGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YCTPVCTSLFQGSVAVLGRILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...GCCAAGGACGGCTACTGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACACGAGGTCAGATGGGGTaGCGTGGGTCTGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTRGQMG*RGSGHL
Trigger: GAGATGACCAGACCCACGCCACCCCATCTGACCTCG...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCAAAGTCTCAGGTGCTTaGAGTGTGGCTAGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAKVSGA*SVARNS
Trigger: GCTGTTTCTAGCCACACTCCAAGCACCTGAGACTTT...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCTGTCCTGCCCCTACTaGCCCCAGCCCACATCAGTG +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLLSCPY*PQPTSV
Trigger: CACTGATGTGGGCTGGGGCCAGTAGGGGCAGGACAG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGGGCCTGCTGAGGTCTaGGCGAGTCCCTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMGPAEV*ASPWFS
Trigger: GCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCC...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGCTGCAACAGGCAATTaGCTGCAGAAAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAAATGN*LQKSWF
Trigger: AAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTAGCCCACCCAAGAGGTaGGGTCGACATGATGAAATC +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGSPPKR*GRHDEI
Trigger: GATTTCATCATGTCGACCCCACCTCTTGGGTGGGCT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCCCCGAGCCCGTCTTaGCCGGCACATACACCACTT +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCPPSPS*PAHTPL
Trigger: AAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGG...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR TCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCGATGTCCTCGGCTCCTaGAGGGAGGCACTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCDVLGS*REALLL
Trigger: CAGGAGCAGTGCCTCCCTTCAGGAGCCGAGGACATC...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCTGCGACGGCAGGACTTaGGGTACGTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGACDGRT*GTCGCA
Trigger: AGCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCA...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCGTGCTTGGGGGCTTTaGCTGGCTCCGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCRAWGL*LAPLSS
Trigger: AGAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACG...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGGGTGGAGGAGCCATTaGCGCTGCCACTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLGWRSH*RCHSQR
Trigger: CCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGGTCGCCCTGCGTGCTaGTCGACGTGGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLGRPAC*STWMGS
Trigger: TGAACCCATCCACGTCGAGCAGCACGCAGGGCGACC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGGAGGCTGTGCCAAGTaGCGTGGCCGGCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LRVHAFRVVHLVIVLMVIGGCAK*RGRREL
Trigger: AAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCC...GATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAGGGGCTGCAGGTTGCTaGTCAAGGCCCCGTACCCGC +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEGAAGC*SRPRTR
Trigger: GCGGGTACGGGGCCTTGAGCAGCAACCTGCAGCCCC...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCCAGAGCTGGAGGGCTaGAGTGGCTGGTTAGGGACA +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVPELEG*SGWLGT
Trigger: TGTCCCTAACCAGCCACTGCAGCCCTCCAGCTCTGG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCCAGAGCTGGAGGGCTaGAGTGGCTGGTTAGGGACA +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLPELEG*SGWLGT
Trigger: TGTCCCTAACCAGCCACTGCAGCCCTCCAGCTCTGG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCGGGCAGCAGAGAGCTaGTGTCATGGCTACGGAGTG +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLRAAES*CHGYGV
Trigger: CACTCCGTAGCCATGACAGCAGCTCTCTGCTGCCCG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGCAGTGGCCACAGCTaGAACAGGCAATTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGSGHS*NRQLAA
Trigger: TGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTGCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTCTCAAGAGCAAGTCTTaGAGAACACACAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGLKSKS*RTHRDW
Trigger: CCAGTCCCTGTGTGTTCTGCAAGACTTGCTCTTGAG...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAGGCGGAAGCCCTTaGAGCGCACCCAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCPGGSP*SAPRTG
Trigger: TCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGG...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp CACAAAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCTCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HKETHKHVEGLKTLRVHASSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...GGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp GTCCTCATGGTCATCGTGGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGGCCTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: VLMVIVVIVVIICRRGPASSWSS*SSSSSS
Trigger: AGATGATGACGACGATGACCACGATGACCATGAGGA...GGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGATGACCATGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp CGCTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATTGCGGGCCCGCTCCTaGAACTCAGGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: RSGSMPSESFILSLSSWSLRARS*NSGNCR
Trigger: CCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAA...TGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp TGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGGCCGAGGTCAGGGATGTTTTCTGCCATaGCCGAGGTCAGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: CLALTGSCQDVFCHGRGQGCFLP*PRSDGV
Trigger: CACCCCATCTGACCTCGGCCATGGCAGAAAACATCC...CTGACCTCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGAGGAACAGCCAGCCTaGCACCTGTCCTGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVEEQPA*HLSCPY
Trigger: GTAGGGGCAGGACAGGTGCCAGGCTGGCTGTTCCTC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACCCTGGACACCCAGTCTaGACTTACTTACCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADPGHPV*TYLPPR
Trigger: CCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGG...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGAAGGGGTGCCTGTTCTaGGAGCGAGTGGCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVKGCLF*ERVALR
Trigger: ACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTT...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCATTTTTAAATGGCTGTaGGACAAGGGCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAIFKWL*DKGFGS
Trigger: GCTCCCAAAGCCCTTGTCCCACAGCCATTTAAAAAT...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGCTGGCTGCAGGACTCTaGCCTGGCGGGGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLLAAGL*PGGGRE
Trigger: CTCCCTGCCCCCGCCAGGCCAGAGTCCTGCAGCCAG...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp TATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGTAGCCGTCCTTGGCAGGTGGCTCAAGCGGTaGGGCCCTGGAGACAGACAC +
Preference number: 4 (lower is better)
Translates to: YCTPVCTSLFQGSVAVLGRWLKR*GPGDRH
Trigger: GTGTCTGTCTCCAGGGCCCCACCGCTTGAGCCACCT...GCCAAGGACGGCTACTGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp AGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTAGGCCTTGGGACAGGTaGCTCAAGCGGTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: RAEIFHLLLSYGAAETQRRPWDR*LKRWGP
Trigger: AGGGCCCCACCGCTTGAGCCACCTGTCCCAAGGCCT...ACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAQVRVS*HPCGVA
Trigger: AGCGACTCCACATGGATGTCAGCTGACCCGCACCTG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGTGGGGCCCGTCCTCTTaGCTGTGGAGGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQWGPSS*LWRFCG
Trigger: CCCGCAGAACCTCCACAGTCAAGAGGACGGGCCCCA...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGCTTGTCACACAGGTTaGTGGGCTGATCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLACHTG*WADPRR
Trigger: CCGCCGAGGATCAGCCCATCAACCTGTGTGACAAGC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGCTTGTCACACAGGTTaGTGGGCTGATCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAACHTG*WADPRR
Trigger: CCGCCGAGGATCAGCCCATCAACCTGTGTGACAAGC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACGCGGTAACTGTAGTTaGGGCCGCCGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLRGNCS*GRRWRT
Trigger: TGTACGCCAACGGCGGCCTCAACTACAGTTACCGCG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGCCCTGGGGGCCTGCTaGGGTCTGGGCGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFALGAC*GLGESL
Trigger: CAGGGACTCGCCCAGACCTCAGCAGGCCCCCAGGGC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTATCCTGAAGGCAACATaGGTCATTCTGACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGILKAT*VILTFP
Trigger: TGGGAAGGTCAGAATGACTCATGTTGCCTTCAGGAT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GCTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATGGTTCCCGGGGCTGCTaGGCGCTTAGGAGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: AQGPCLQSRSSCHCPHGHGSRGC*ALRRVS
Trigger: TGACACCCTCCTAAGCGCTCAGCAGCCCCGGGAACC...ATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACCGAGTCGCCGTAGGTaGGCAAGCACCAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSPSRRR*ASTSPG
Trigger: TCCGGGACTGGTGCTTGCGCACCTACGGCGACTCGG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp AGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTCGTGCTTGGGGGCTTTaGCTGGCTCCGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RAEIFHLLLSYGAAETQRRAWGL*LAPLSS
Trigger: AGAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACG...ACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATTCTTCTGCCCAGCGTaGTTGGGGGCTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLFFCPA*LGALPG
Trigger: GCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGGGCCACGGCGCCGTTaGCATTCATCTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSGPRRR*HSSRGR
Trigger: CCTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGACGCTCAGGGTCCATaGCTTCAGAGTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADDAQGP*LQSRSS
Trigger: AGATGAACGACTCTGAAGGCATGGACCCTGAGCGTC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCTAGACGCATCCGCTTGGCTGCCTTTCTTGTCTCGCTCTCACAGGCAGCTGCCGACGCTCAGGGTCCATaGCTTCAGAGTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: SRRIRLAAFLVSLSQAAADAQGP*LQSRSS
Trigger: AGATGAACGACTCTGAAGGCATGGACCCTGAGCGTC...GGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGAACTCAGGGAACTaGCGGCTGCAGGACTCGATG +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVWNSGN*RLQDSM
Trigger: CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCA...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAACGTGCGGATGCGCTTaGGGGCCCGCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILETCGCA*GPAPGT
Trigger: AGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGGAGTGGGTGATGGCTaGGGAGTCCCGCGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSGVGDG*GVPRVL
Trigger: CAGCACTCGCGGGACTCCGCAGCCATCACCCACTCC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCCTTCCCTAGGGCAGTaGGCTCCAGGTGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSPSLGQ*APGAGG
Trigger: CCCACCGGCACCTGGAGCGCACTGCCCTAGGGAAGG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGATTCTAAACAGAGCTaGAGCCCCAGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADDSKQS*SPSALS
Trigger: TGACAAGGCGCTGGGGCTGCAGCTCTGTTTAGAATC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGTGGGATTAGCCTCCTaGAAAGACTCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGVGLAS*KDSGIG
Trigger: TCCAATTCCAGAGTCTTTGCAGGAGGCTAATCCCAC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACTATCTGGAGCCCTGTaGCCCTCCCCGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSLSGAL*PSPEVG
Trigger: TCCCACCTCCGGGGAGGGGCACAGGGCTCCAGATAG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGACCTCGGCGATCCGCTaGTATTTGCTGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLTSAIR*YLLRVT
Trigger: GGTGACACGCAGCAAATACCAGCGGATCGCCGAGGT...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGTCTGCCCAGCGTGCTTaGGGGCTTTGCCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQSAQRA*GLCLAP
Trigger: CGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGA...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAAGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILESSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGTCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQSSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSRILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATGGATGGGTTCAGGGTaGAGGAGCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLWMGSG*RSHCRC
Trigger: GCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CACAAAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCGCGTGCTGCTCGACGTaGATGGGTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HKETHKHVEGLKTLRVHAACCST*MGSGWR
Trigger: CCTCCACCCTGAACCCATCCACGTCGAGCAGCACGC...GGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATGGGCTGCTTGGAGATaGGCACCATGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLWAAWR*APCGPG
Trigger: ACCTGGACCGCATGGTGCCCATCTCCAAGCAGCCCA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACACCTGGATCTTCTCCTTaGGCTGCTTGGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTPGSSP*AAWRWA
Trigger: TGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGG...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGCTGGTGGTGTCCCTGTaGCAGCACTGGGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLLVVSL*QHWDLQ
Trigger: TTGCAGATCCCAGTGCTGCCACAGGGACACCACCAG...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGGGCTTCTGTAGAATaGGGTCGGGGTGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGASVE*GRGASF
Trigger: AAAAGAGGCACCCCGACCCCATTCTACAGAAGCCCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGCAGACACATTGTGTaGGGGAGTTGGGGTTACAGC +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGRHIV*GSWGYS
Trigger: GCTGTAACCCCAACTCCCCCACACAATGTGTCTGCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTAGCTGCAGCCCGCCCTaGAGCTCACGGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSSCSPP*SSRLPD
Trigger: ATCAGGCAGCCGTGAGCTCCAGGGCGGGCTGCAGCT...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGGATCCACTCGGCCCTaGCTCCCCTGGGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAGSTRP*LPWGLS
Trigger: AGAGAGGCCCCAGGGGAGCCAGGGCCGAGTGGATCC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGGTGGTGTGGCTGGATaGGGTATTGGAGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVGGVAG*GIGGHL
Trigger: CAAGTGGCCTCCAATACCCCATCCAGCCACACCACC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGGGCCATCTACCAGGTaGAAAGTGTTTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGGPSTR*KVFFSQ
Trigger: TTGGCTGAAAAACACTTTCCACCTGGTAGATGGCCC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCCAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SELRYFTFFFPTEPLRRSQVRVS*HPCGVA
Trigger: AGCGACTCCACATGGATGTCAGCTGACCCGCACCTG...GCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCACAGGTTGATGGGCTaGTCCTCGGCGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSHRLMG*SSAAVV
Trigger: CACCACGGCCGCCGAGGATCAGCCCATCAACCTGTG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACACAATGCCCACTTCTCTaGTGCTACCCTTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTQCPLL*CYPSCG
Trigger: CCCACAAGAAGGGTAGCATCAGAGAAGTGGGCATTG...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACTGGGTTCCACCTGTTTaGAATCCTCGAAAACCCTCC +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADWVPPV*NPRKPS
Trigger: GGAGGGTTTTCGAGGATTTCAAACAGGTGGAACCCA...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTTGGGTTCCCGGCCGCTaGCCAGGCGGAAGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFWVPGR*PGGSPW
Trigger: CCAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCA...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACCCGCTTCAGAGAGATaGCCTCTGGCTCCGACAGGC +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEPASER*PLAPTG
Trigger: GCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp TCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCTTCTTCTGCCCAGCGTaGTTGGGGGCTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SELRYFTFFFPTEPLRRSFFCPA*LGALPG
Trigger: GCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAA...GCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GCTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATGGGTGGAGGAGCCATTaGCGCTGCCACTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: AQGPCLQSRSSCHCPHGHGWRSH*RCHSQR
Trigger: CCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCC...ATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTGGGTGGAGGAGCCATTaGCGCTGCCACTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSGWRSH*RCHSQR
Trigger: CCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCC...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGGGCCACGGCGCCGTTaGCATTCATCTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSGPRRR*HSSRGR
Trigger: CCTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCTGGAGATGGGCACCATaGGGTCCAGGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAWRWAP*GPGSRP
Trigger: TGGACGAGAACCTGGACCGCATGGTGCCCATCTCCA...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGACGCATCCGCTTGGCTaGCTTTCTTGTCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMTHPLG*LSCLAL
Trigger: GAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGGGGCTGCAGGTTGCTaGTCAAGGCCCCGTACCCGC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSGAAGC*SRPRTR
Trigger: GCGGGTACGGGGCCTTGAGCAGCAACCTGCAGCCCC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGAGGGAGGCAGGGGGCTaGAGGTTGCTGCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMREAGG*RLLLKA
Trigger: GGCCTTGAGCAGCAACCTGCAGCCCCCTGCCTCCCT...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGCCCTGCCAACCGGCTaGCATCTCCCAGCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAALPTG*HLPAVR
Trigger: ACGGACTGCTGGGAGATGGCAGCCGGTTGGCAGGGC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAATGGCTACGGAGTGTTaGACGGAGAGGCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEMATEC*TERPWG
Trigger: CCCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCAT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACCTCAAGAGCAAGTCTTaGAGAACACACAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADLKSKS*RTHRDW
Trigger: CCAGTCCCTGTGTGTTCTGCAAGACTTGCTCTTGAG...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTACTGTTTGCCTTAAGTaGTTACTATCTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGTVCLK*LLSGAL
Trigger: CAGGGCTCCAGATAGTAAGCACTTAAGGCAAACAGT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTGAGACGCAGCGTGTATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCACTCCGACAGGCCATCTaGCCCCTTGAACTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRRSVYCTPVCTSLFQGSLRQAI*PLELSS
Trigger: AGAGGACAGTTCAAGGGGGCAGATGGCCTGTCGGAG...TGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATACACGCTGCGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCACCTCGGCGATCCGCTaGTATTTGCTGCGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCTSAIR*YLLRVT
Trigger: GGTGACACGCAGCAAATACCAGCGGATCGCCGAGGT...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGCCACTTGGCCCATCTTaGGTTCCCGGCCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMPLGPS*VPGRCP
Trigger: TGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGG...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGTCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETSSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETRILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCTGTGCCAAGTGCCGTaGCCGGCGGGAGCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSLCQVP*PAGACH
Trigger: GTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTTGCGGGCCCGCTCCTaGAACTCAGGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSLRARS*NSGNCR
Trigger: CCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACTGTCCTGCCCCTACTaGCCCCAGCCCACATCAGTG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSLSCPY*PQPTSV
Trigger: CACTGATGTGGGCTGGGGCCAGTAGGGGCAGGACAG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACTGGTGGTGTCCCTGTaGCAGCACTGGGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLLVVSL*QHWDLQ
Trigger: TTGCAGATCCCAGTGCTGCCACAGGGACACCACCAG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGGCAGACACATTGTGTaGGGGAGTTGGGGTTACAGC +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVGRHIV*GSWGYS
Trigger: GCTGTAACCCCAACTCCCCCACACAATGTGTCTGCC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACCATGGCGCAAGGGGATaGGAGCTGCAGCCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDHGARG*ELQPAL
Trigger: CAGGGCGGGCTGCAGCTCCCATCCCCTTGCGCCATG...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTGCACGGAGAGGCCCTaGGGGCCTGCTGAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDCTERP*GPAEVW
Trigger: CCAGACCTCAGCAGGCCCCCAGGGCCTCTCCGTGCA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTGGGGATTGGTCAGATaGAAGGCAGAGGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLWGLVR*KAEVVW
Trigger: CCACACCACCTCTGCCTTCCATCTGACCAATCCCCA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGAGAGGCCTTGGGCACTaGAGGTTGTGCTGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVRGLGH*RLCCAK
Trigger: CTTAGCACAGCACAACCTCCAGTGCCCAAGGCCTCT...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTACTGAGCCAGCTAAATaGAATCCTGTTTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGTEPAK*NPVSMQ
Trigger: CTGCATGGAAACAGGATTCCATTTAGCTGGCTCAGT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGTCAGAACCAGCTCTTTaGTGCCCTCCAAGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMSEPAL*CPPSRE
Trigger: CTCCCGACTTGGAGGGCACCAAAGAGCTGGTTCTGA...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGGGACAGGCCAGGGTCTaGGCCTGGCTGCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETGQARV*AWLQDS
Trigger: AGAGTCCTGCAGCCAGGCCCAGACCCTGGCCTGTCC...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
3UTR CAA 72 bp TACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTaGGGGTTACAGCTGTTCAGAACAGGCTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: YLPPRQTHCVGE*GLQLFRTGSGH
Trigger: GTGCCCTGAGCCTGTTCTGAACAGCTGTAACCCCAACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSQVRVS*HPCGVA
Trigger: AGCGACTCCACATGGATGTCAGCTGACCCGCACCTG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GCTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATGCTTGTCACACAGGTTaGTGGGCTGATCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: AQGPCLQSRSSCHCPHGHACHTG*WADPRR
Trigger: CCGCCGAGGATCAGCCCATCAACCTGTGTGACAAGC...ATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTCTTCACCCCGTATTTaGCGCGGCTCCGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSSSPRI*RGSAAR
Trigger: ACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCCCCGCCTTTCATGCTaGGGTCCGTGGGCCCATTAC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAPRLSC*GPWAHY
Trigger: GTAATGGGCCCACGGACCTCAGCATGAAAGGCGGGG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTAGCCGGGGCTCACCCTaGAGAAGTGGCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSSRGSP*RSGPSW
Trigger: CCAAGAGGGGCCACTTCTTCAGGGTGAGCCCCGGCT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGCAAAACAAGTTCCCTaGCTGAGCCAGCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADAKQVP*LSQLNG
Trigger: TCCATTTAGCTGGCTCAGTCAGGGAACTTGTTTTGC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGTAGCCGTCCTTGGCGTGTGGGAACCCAAATaGTGCACAAACAGCACCCGC +
Preference number: 4 (lower is better)
Translates to: YCTPVCTSLFQGSVAVLGVWEPK*CTNSTR
Trigger: GCGGGTGCTGTTTGTGCATCATTTGGGTTCCCACAC...GCCAAGGACGGCTACTGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp TTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGAGGTGCCGGAGACAGTaGGGATGGCTGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FSAILYETKPGGCASGCLRCRRQ*GWLLLG
Trigger: TCCCAGGAGCAGCCATCCTCACTGTCTCCGGCACCT...CAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR GCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCCCGCTTCAGAGAGATaGCCTCTGGCTCCGACAGGC +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETPASER*PLAPTG
Trigger: GCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGG...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCGTGCTTGGGGGCTTTaGCTGGCTCCGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSRAWGL*LAPLSS
Trigger: AGAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTAAGGCAGGGTCGCCCTaGGTGCTGCTCGACGTGGAT +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSKAGSP*VLLDVD
Trigger: ATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGTGGTCATCAAGGCAGGGTCGCCCTaGGTGCTGCTCGACGTGGAT +
Preference number: 4 (lower is better)
Translates to: HAFRVVHLVIVLMVIVVIKAGSP*VLLDVD
Trigger: ATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTT...GATGACCACGATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGCTCTCACAGGCAGCTaGCAGGATGTTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMALTGS*QDVFCH
Trigger: ATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGC...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGGTTTTCCAGTTCATCTaGAGAGCGCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLVFQFI*RAQQEG
Trigger: GCCTTCCTGCTGCGCTCTGCAGATGAACTGGAAAAC...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGCAGTGCGCTCCAGGTaGCGGTGGGGTCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGAVRSR*RWGQFC
Trigger: GCAGAACTGACCCCACCGGCACCTGGAGCGCACTGC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGCCTCCTGCTTGGCGTTaGCTAGGGAGGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMPPAWR*LGRCLV
Trigger: CACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGG...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGCCCTGCCAACCGGCTaGCATCTCCCAGCAGTCCGT +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIALPTG*HLPAVR
Trigger: ACGGACTGCTGGGAGATGGCAGCCGGTTGGCAGGGC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGAGGGGCCAGGCCTGTaGACAGAAGTTCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSEGPGL*TEVQTW
Trigger: CCAGGTCTGAACTTCTGTGCACAGGCCTGGCCCCTC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCAAGGGGATGGGAGCTaGAGCCCGCCCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIQGDGS*SPPWSS
Trigger: TGAGCTCCAGGGCGGGCTGCAGCTCCCATCCCCTTG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTGGTGGCGATTGTCTCTaGCAGGTTTTAACATTAAGA +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGGGDCL*QVLTLR
Trigger: TCTTAATGTTAAAACCTGGCAGAGACAATCGCCACC...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCCACAGTGGGCCACAGTaGCCCCCAGTTAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SELRYFTFFFPTEPLRRSHSGPQ*PPVRRR
Trigger: TCTCCTTCTAACTGGGGGGCACTGTGGCCCACTGTG...GCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp AGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGTGCAAAACCAGGGGGCTGTaGTTCCGGCTGTTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SAILYETKPGGCASGCLCKTRGL*FRLFVR
Trigger: CCGCACAAACAGCCGGAAGCACAGCCCCCTGGTTTT...GCACAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCGGGAGGCACTGCTCCTaGGAATTCATCACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCGRHCS*EFITRS
Trigger: GCTTCGAGTGATGAATTCCCAGGAGCAGTGCCTCCC...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp CTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCAGTCTCATCCTGGGCTaGAAGCGAGGCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LRVHAFRVVHLVIVLMVISLILG*KRGGDG
Trigger: CCCATCTCCGCCTCGCTTCCAGCCCAGGATGAGACT...GATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTTCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAASSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTCGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAARILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGTCTCTGCAGAGACCCTaGGGTTCCTGGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQSLQRP*GSWPVE
Trigger: CTCTACGGGCCAGGAACCCCAGGGTCTCTGCAGAGA...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGCTGCTCGACGTGGATaGGTTCAGGGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAAARRG*VQGGGA
Trigger: GGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACCTGTGCCAAGTGCCGTaGCCGGCGGGAGCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDLCQVP*PAGACH
Trigger: GTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAG...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACTTGTCATTGTCCTCATaGTCATCGTGGTCATCGTCG +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADLSLSS*SSWSSS
Trigger: CGACGATGACCACGATGACCATGAGGACAATGACAA...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATGGGCTGCTTGGAGATaGGCACCATGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEWAAWR*APCGPG
Trigger: ACCTGGACCGCATGGTGCCCATCTCCAAGCAGCCCA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCTTCATGGGCTGCTTGGAGATaGGCACCATGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KRRTNMLKALRRSGSMPSWAAWR*APCGPG
Trigger: ACCTGGACCGCATGGTGCCCATCTCCAAGCAGCCCA...TGAAGGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp GATGGGCACCATGCGGTCCAGGTTCTCGTCCACAAAGAGACGCACAAACATGTTCCTGGATCTTCTCCTTaGGCTGCTTGGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: DGHHAVQVLVHKETHKHVPGSSP*AAWRWA
Trigger: TGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGG...AACATGTTTGTGCGTCTCTTTGTGGACGAGAACCTGGACCGCATGGTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTTGCGGGCCCGCTCCTaGAACTCAGGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGILRARS*NSGNCR
Trigger: CCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTATGGCCGAGGTCAGATaGGGTGGCGTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAMAEVR*GGVGLV
Trigger: GACCAGACCCACGCCACCCCATCTGACCTCGGCCAT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACTAGACGCATCCGCTTaGCTGCCTTTCTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLLDASA*LPFLSR
Trigger: GCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGTGGGCCCATTACTGTaGTTTCCTGTTTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMVGPLL*FPVWRE
Trigger: CTCCCTCCAAACAGGAAACCACAGTAATGGGCCCAC...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCGGGCCTGCTGGTGCTaGTGCTGGAGGGGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTRACWC*CWRGWA
Trigger: CGCCCACCCCCTCCAGCACCAGCACCAGCAGGCCCG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACATTGTGTGGGGGAGTTaGGGTTACAGCTGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADIVWGS*GYSCSE
Trigger: TTCTGAACAGCTGTAACCCCAACTCCCCCACACAAT...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGCTGGAGGGCTGCAGTaGCTGGTTAGGGACAGGACG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSAGGLQ*LVRDRT
Trigger: CGTCCTGTCCCTAACCAGCCACTGCAGCCCTCCAGC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTTCAGACCTGGCTCCTaGGCAGCGGGGTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIFRPGS*AAGCEG
Trigger: GCCCTCACACCCCGCTGCCCAGGAGCCAGGTCTGAA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGAGCTGCAGCCCGCCCTaGAGCTCACGGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGSCSPP*SSRLPD
Trigger: ATCAGGCAGCCGTGAGCTCCAGGGCGGGCTGCAGCT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCCTTTACTCCAAACATaGCGCAAGGGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVPLLQT*RKGMGA
Trigger: AGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTGTGTGGGAGAGGCCTTaGGCACTGGAGGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSVWERP*ALEVVL
Trigger: CAGCACAACCTCCAGTGCCCAAGGCCTCTCCCACAC...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGTAGTACTGAGCAGGTaGGGCCAGATGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVVVLSR*GQMCGW
Trigger: CCATCCACACATCTGGCCCCACCTGCTCAGTACTAC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTTCAGAACCAGCTCTTTaGTGCCCTCCAAGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVSEPAL*CPPSRE
Trigger: CTCCCGACTTGGAGGGCACCAAAGAGCTGGTTCTGA...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGCCCCTCCCCGGAGGTaGGACCTCATGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIAPPRR*DLMKEL
Trigger: CAGCTCCTTCATGAGGTCCCACCTCCGGGGAGGGGC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCCCCCGAGCCCGTCTTaGCCGGCACATACACCACTT +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIPPSPS*PAHTPL
Trigger: AAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR TCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCCTCGGCGGCCGTGGTaGAGTCCATGGGGGCCACGG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPPRRPW*SPWGPR
Trigger: CCGTGGCCCCCATGGACTTCACCACGGCCGCCGAGG...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCTTCAGGCTGCAGGACTCGATaGTGGCCTGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KRRTNMLKALRRSGSMPSGCRTR*WPGSSP
Trigger: AGGAGAAGATCCAGGCCATCATCGAGTCCTGCAGCC...TGAAGGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGGCTGCAGGACTCGATaGTGGCCTGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSGCRTR*WPGSSP
Trigger: AGGAGAAGATCCAGGCCATCATCGAGTCCTGCAGCC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGCGCGGTAACTGTAGTTaGGGCCGCCGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMRGNCS*GRRWRT
Trigger: TGTACGCCAACGGCGGCCTCAACTACAGTTACCGCG...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTGCCATGGGTGTGGGTaGGGTCCTCCTGCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDCHGCG*GPPAWR
Trigger: ACGCCAAGCAGGAGGACCTCACCCACACCCATGGCA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGAGGTAGAATACAGGTaGCCATGGACTGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAEVEYR*PWTGAS
Trigger: AGAAGCCCCAGTCCATGGTCACCTGTATTCTACCTC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTAAAGTATCAACCCTCTaGGTTCAAAGCAGCATTTTG +
Preference number: 4 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGKVSTL*VQSSIL
Trigger: CAAAATGCTGCTTTGAACTCAGAGGGTTGATACTTT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAAAGAGGTCTCTCTTCTaGCTCCTGCTCCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTKRSLF*LLLLNG
Trigger: TCCATTTAGGAGCAGGAGTCAGAAGAGAGACCTCTT...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACAACATGAGTCATTCTaGCCTTCCCACTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLQHESF*PSHSQA
Trigger: AGCCTGGGAGTGGGAAGGTCAGAATGACTCATGTTG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AAAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCTTCAGGAGCCATTGCCGCTaGCACTCTCAGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KETHKHVEGLKTLRVHAFRSHCR*HSQRRS
Trigger: ACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCT...GAAGGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGGTCGCCCTGCGTGCTaGTCGACGTGGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIGRPAC*STWMGS
Trigger: TGAACCCATCCACGTCGAGCAGCACGCAGGGCGACC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GATGGGCACCATGCGGTCCAGGTTCTCGTCCACAAAGAGACGCACAAACATGTTTGCCAGGATGTTTTCTaGCATGGCCGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: DGHHAVQVLVHKETHKHVCQDVF*HGRGQM
Trigger: CATCTGACCTCGGCCATGGCAGAAAACATCCTGGCA...AACATGTTTGTGCGTCTCTTTGTGGACGAGAACCTGGACCGCATGGTGCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCTGCCAGGATGTTTTCTaGCATGGCCGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGACQDVF*HGRGQM
Trigger: CATCTGACCTCGGCCATGGCAGAAAACATCCTGGCA...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGAGTCCCGCGAGTGCTaGTTGTCCAGGGCTATGGGC +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDESREC*LSRAMG
Trigger: GCCCATAGCCCTGGACAAGCAGCACTCGCGGGACTC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCGGTGGGGTCAGTTCTaGTGTAGGATGAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGARWGQF*CRMRFS
Trigger: GGAAAACCTCATCCTACAGCAGAACTGACCCCACCG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCCTCCTGCTTGGCGTTaGCTAGGGAGGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGPPAWR*LGRCLV
Trigger: CACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCATGGTTTGGGAAGGGGTaGCTGTTCTGGGAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSWFGKG*LFWERV
Trigger: CACTCGCTCCCAGAACAGGCACCCCTTCCCAAACCA...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTACCCTCCTAACTCCCTaGCTGTCCCCCTCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSTLLTP*LSPSPS
Trigger: TGACGGGGAGGGGGACAGGCAGGGAGTTAGGAGGGT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTTTCATCCCACAGCTCTaGAGCAAAGTCCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVFIPQL*SKVLPS
Trigger: GGAAGGCAGGACTTTGCTGCAGAGCTGTGGGATGAA...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGGGCCACAGAGAAAGGTaGCTGGGACCAGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETGHRER*LGPAPQ
Trigger: TTGAGGGGCTGGTCCCAGGCACCTTTCTCTGTGGCC...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTGAGCGCACCCAGAACTaGAACTTGCCTTTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSERTQN*NLPFSP
Trigger: CGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTC...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCAGAGAGATGCCCTCTaGCTCCGACAGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAQRDAL*LRQAIC
Trigger: GCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTTCTGCCCAGCGTGCTTaGGGGCTTTGCCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFSAQRA*GLCLAP
Trigger: CGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGA...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCTCTGCCCAGCGTGCTTaGGGGCTTTGCCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFSAQRA*GLCLAP
Trigger: CGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGA...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAATCCCAGAGACCAGTaGAGATGGAGGCTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMNPRDQ*RWRLVF
Trigger: GAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp TCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGAAAGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLANELDVTHLDLPLKLKGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...TTTCAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGTCTCTGCAGAGACCCTaGGGTTCCTGGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETSLQRP*GSWPVE
Trigger: CTCTACGGGCCAGGAACCCCAGGGTCTCTGCAGAGA...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp AGGTTCTCGTCCACAAAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCATGGATGGGTTCAGGGTaGAGGAGCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RFSSTKRRTNMLKALRRSWMGSG*RSHCRC
Trigger: GCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCA...TGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTTTGTGGACGAGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGCGTGCTGCTCGACGTaGATGGGTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGACCST*MGSGWR
Trigger: CCTCCACCCTGAACCCATCCACGTCGAGCAGCACGC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACATTGTCATTGTCCTCATaGTCATCGTGGTCATCGTCG +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTLSLSS*SSWSSS
Trigger: CGACGATGACCACGATGACCATGAGGACAATGACAA...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCTGTGGTTTCCTGTTTaGAGGGAGGCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSLWFPV*REAGGC
Trigger: GCAGCCCCCTGCCTCCCTCCAAACAGGAAACCACAG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCCAGAGCTGCCCCGTTaGCCTCTTCCAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAPELPR*PLPSRS
Trigger: TGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTCCCTGTGGCAGCACTaGGATCTGCAACAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSSLWQH*DLQQDG
Trigger: GCCATCCTGTTGCAGATCCCAGTGCTGCCACAGGGA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTACAGAAGTTCAGACCTaGCTCCTGGGCAGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSTEVQT*LLGSGV
Trigger: CACCCCGCTGCCCAGGAGCCAGGTCTGAACTTCTGT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTCTCACCCTGAAGAAGTaGCCCCTCTTGGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSLTLKK*PLLAGV
Trigger: CACTCCTGCCAAGAGGGGCCACTTCTTCAGGGTGAG...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTACACTCCAGGGATTATaGGTTTCTTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVTLQGL*VSSRTG
Trigger: GCCGGTCCTGGAAGAAACCCATAATCCCTGGAGTGT...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTGTCTGGGCGAGTCCCTaGTTTAGCAGCACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSVWASP*FSSTGR
Trigger: CCTACCAGTGCTGCTAAACCAGGGACTCGCCCAGAC...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATGTTCTGGGAGCGAGTaGCTCTCCGTGGCCATCCTA +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILECSGSE*LSVAIL
Trigger: TAGGATGGCCACGGAGAGCCACTCGCTCCCAGAACA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTAGTGCCGGGAGGCAGTaGCCACAGCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGISAGRQ*PQLQQA
Trigger: TGCCTGTTGCAGCTGTGGCCACTGCCTCCCGGCACT...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGAGTGCCGGGAGGCAGTaGCCACAGCTGCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGSAGRQ*PQLQQA
Trigger: TGCCTGTTGCAGCTGTGGCCACTGCCTCCCGGCACT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAAGATGTGTGGATGGCTaGGGTGTGGGAGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILERCVDG*GVGEAL
Trigger: CAAGGCCTCTCCCACACCCCAGCCATCCACACATCT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTGGTTCATGTCTAGCTTaGGTACTGCCTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVGSCLA*VLPLGG
Trigger: TCCTCCCAGAGGCAGTACCCAAGCTAGACATGAACC...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTGTCCTGGAGGGGCCTaGGAGGCCCAATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSCPGGA*EAQWTL
Trigger: TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGACTAAAGACCTCTTaGGTTGTCCCTAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGLKTS*VVPKSW
Trigger: CCAGGATTTAGGGACAACCCAAGAGGTCTTTAGTCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTGAGACGCAGCGTGTATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGTCGCACCTGCCATCTaGAACAGGCCTCACATATTC +
Preference number: 4 (lower is better)
Translates to: LRRSVYCTPVCTSLFQGSVAPAI*NRPHIF
Trigger: GAATATGTGAGGCCTGTTCCAGATGGCAGGTGCGAC...TGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATACACGCTGCGTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGAGTCATCGTCCTCTTaGCTGTGGAGGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAESSSS*LWRFCG
Trigger: CCCGCAGAACCTCCACAGTCAAGAGGACGATGACTC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGGGGATACATCCTTCTaGTCAGACAGACACAGACTA +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVGDTSF*SDRHRL
Trigger: TAGTCTGTGTCTGTCTGATCAGAAGGATGTATCCCC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGTATTGGAGGCCACTTaGGAGATAACGACCACCCCC +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSVLEAT*EITTTP
Trigger: GGGGGTGGTCGTTATCTCTCAAGTGGCCTCCAATAC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACGTGGTGACGGTAAAATaGATTTCAGATGGGTTACAC +
Preference number: 4 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADVVTVK*ISDGLH
Trigger: GTGTAACCCATCTGAAATTCATTTTACCGTCACCAC...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGTAGCCGTCCTTGGCGAAGGCATAGGTCTCTaGGATCGCTCGGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: YCTPVCTSLFQGSVAVLGEGIGL*DRSVGF
Trigger: AAAACCTACCGAGCGATCGCAGAGACCTATGCCTTC...GCCAAGGACGGCTACTGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp CTGCTTGGAGATGGGCACCATGCGGTCCAGGTTCTCGTCCACAAAGAGACGCACTATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: LLGDGHHAVQVLVHKETHYQNPR*SQKSHP
Trigger: AGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATA...GTGCGTCTCTTTGTGGACGAGAACCTGGACCGCATGGTGCCCATCTCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp CTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCACGCATCCGCTTGGCTaGCTTTCTTGTCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LRVHAFRVVHLVIVLMVITHPLG*LSCLAL
Trigger: GAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGT...GATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCGGTGGGCACGGGCCTaGTGGTGCTGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPRWARA*WCWCWR
Trigger: CCTCCAGCACCAGCACCAGCAGGCCCGTGCCCACCG...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTAGGGTGCACCAGGCATaGAGAGGAACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSRVHQA*RGTASL
Trigger: CAGGCTGGCTGTTCCTCTGCATGCCTGGTGCACCCT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGAGGGTGCACCAGGCATaGAGAGGAACAGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGRVHQA*RGTASL
Trigger: CAGGCTGGCTGTTCCTCTGCATGCCTGGTGCACCCT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGGCAGCACTGGGATCTaGAACAGGATGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIGSTGI*NRMAWP
Trigger: TGGCCAGGCCATCCTGTTGCAGATCCCAGTGCTGCC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAGCACTGGTAGGTATTaGACTGAGCAAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMSTGRY*TEQEEV
Trigger: CACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCGGGCAGCAGAGAGCTaGTGTCATGGCTACGGAGTG +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGRAAES*CHGYGV
Trigger: CACTCCGTAGCCATGACAGCAGCTCTCTGCTGCCCG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCTGTTAGCGCGTAGCTaGCGCCGCCACCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: IDTVLSELRYFTFFFPTELLARS*RRHRHH
Trigger: GTGGTGGCGGTGGCGGCGGCAGCTACGCGCTAACAG...CTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGTGCGGACAGTGAGGATGGCTaGTCCTGGGAATTCATCACT +
Preference number: 4 (lower is better)
Translates to: VPFCMKQNQGAVLPAVCADSEDG*SWEFIT
Trigger: AGTGATGAATTCCCAGGAGCAGCCATCCTCACTGTC...CGCACAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTCAGAGAGATGCCCTCTaGCTCCGACAGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAAQRDAL*LRQAIC
Trigger: GCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTG...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp TATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGTAGCCGTCCTTGGCAGAGACCAGTGGAGATaGAGGCTCGTTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: YCTPVCTSLFQGSVAVLGRDQWR*RLVFFG
Trigger: CCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCT...GCCAAGGACGGCTACTGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCAGAGACCAGTGGAGATaGAGGCTCGTTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGARDQWR*RLVFFG
Trigger: CCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCT...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTAGTCTCATCCTGGGCTaGAAGCGAGGCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAASLILG*KRGGDG
Trigger: CCCATCTCCGCCTCGCTTCCAGCCCAGGATGAGACT...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326071.8
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGCGTGCTGCTCGACGTaGATGGGTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFACCST*MGSGWR
Trigger: CCTCCACCCTGAACCCATCCACGTCGAGCAGCACGC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMSSWSS*SSSSSS
Trigger: AGATGATGACGACGATGACCACGATGACCATGAGGA...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CTTTCTTGTCTCGCTCTCACAGGCAGCTGCCAGGATGTTTTCTGCCATGGCCGATTGTCATTGTCCTCATaGTCATCGTGGTCATCGTCG +
Preference number: 4 (lower is better)
Translates to: LSCLALTGSCQDVFCHGRLSLSS*SSWSSS
Trigger: CGACGATGACCACGATGACCATGAGGACAATGACAA...TCGGCCATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGTCAGATGGGGTGGCGTaGGTCTGGTCATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMSDGVA*VWSSPC
Trigger: GCATGGAGATGACCAGACCCACGCCACCCCATCTGA...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGACGCTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGCTAGACGCATCCGCTTaGCTGCCTTTCTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: KTLRVHAFRVVHLVIVLMLDASA*LPFLSR
Trigger: GCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAG...CATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAGCGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGTGGTTTCCTGTTTaGAGGGAGGCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGLWFPV*REAGGC
Trigger: GCAGCCCCCTGCCTCCCTCCAAACAGGAAACCACAG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGAGGAACAGCCAGCCTaGCACCTGTCCTGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFEEQPA*HLSCPY
Trigger: GTAGGGGCAGGACAGGTGCCAGGCTGGCTGTTCCTC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGGGCCTGCTGAGGTCTaGGCGAGTCCCTGGTTTAGC +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFGPAEV*ASPWFS
Trigger: GCTAAACCAGGGACTCGCCCAGACCTCAGCAGGCCC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGGCTGCAACAGGCAATTaGCTGCAGAAAAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLAATGN*LQKSWF
Trigger: AAACCAGCTTTTCTGCAGCCAATTGCCTGTTGCAGC...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAAGAGGCCTTGGGCACTaGAGGTTGTGCTGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILERGLGH*RLCCAK
Trigger: CTTAGCACAGCACAACCTCCAGTGCCCAAGGCCTCT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGGGCCATCTACCAGGTaGAAAGTGTTTTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMGPSTR*KVFFSQ
Trigger: TTGGCTGAAAAACACTTTCCACCTGGTAGATGGCCC...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGGAACCCTGAAGAAATaGCTTGTACTATCTGCACTG +
Preference number: 4 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTGTLKK*LVLSAL
Trigger: CAGTGCAGATAGTACAAGCCATTTCTTCAGGGTTCC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGCCCCTCCCCGGAGGTaGGACCTCATGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKAPPRR*DLMKEL
Trigger: CAGCTCCTTCATGAGGTCCCACCTCCGGGGAGGGGC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTAGCCAGGATGTCTACGTaGCCTTCAAGGAGAACCCAA +
Preference number: 4 (lower is better)
Translates to: AEIFHLLLSYGAAETQRVARMST*PSRRTQ
Trigger: TTGGGTTCTCCTTGAAGGCCACGTAGACATCCTGGC...TACACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp CCTGGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCGAGGATGGCTGCTCCTaGGAATTCATCACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PGFSAILYETKPGGCASGEDGCS*EFITRS
Trigger: GCTTCGAGTGATGAATTCCCAGGAGCAGCCATCCTC...GCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR TCA 90 bp AGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTAAGTGCATCCTCTTCTaGCACTCCGTACAGCTCATC +
Preference number: 4 (lower is better)
Translates to: RAEIFHLLLSYGAAETQRKCILF*HSVQLI
Trigger: GATGAGCTGTACGGAGTGTCAGAAGAGGATGCACTT...ACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp TCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCTCAGGTAGGTGGAGGTaGGGGGCATGTTGTAATCAA +
Preference number: 4 (lower is better)
Translates to: SELRYFTFFFPTEPLRRSSGRWR*GACCNQ
Trigger: TTGATTACAACATGCCCCTCACCTCCACCTACCTGA...GCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp CCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGTGCGGTTTCAGGTAGGTGGAGGTaGGGGGCATGTTGTAATCAA +
Preference number: 4 (lower is better)
Translates to: PFCMKQNQGAVLPAVCAVSGRWR*GACCNQ
Trigger: TTGATTACAACATGCCCCTCACCTCCACCTACCTGA...AACCGCACAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR TCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTAAATGTACCAACTGGTaGGGCAGGAAGCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSKCTNW*GRKPGP
Trigger: TGGACCTGGCTTCCTGCCTCACCAGTTGGTACATTT...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGTATTGGAGGCCACTTaGGAGATAACGACCACCCCC +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSVLEAT*EITTTP
Trigger: GGGGGTGGTCGTTATCTCTCAAGTGGCCTCCAATAC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAATGGACCACATAATTaGGGCATATGGGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMNGPHN*GIWAIY
Trigger: GTAGATGGCCCATATGCCTCAATTATGTGGTCCATT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTAGGAGCCATTGCCGCTaGCACTCTCAGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIRSHCR*HSQRRS
Trigger: ACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCT...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACAGGAGCCATTGCCGCTaGCACTCTCAGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDRSHCR*HSQRRS
Trigger: ACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCT...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGAAGGCAGGGTCGCCCTaGGTGCTGCTCGACGTGGAT +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKKAGSP*VLLDVD
Trigger: ATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAGGGGTAGGAGGCTGTaGCAAGTGCCGTGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPRGRRL*QVPWPA
Trigger: CGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCT...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTGGAGATGGGCACCATaGGGTCCAGGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDWRWAP*GPGSRP
Trigger: TGGACGAGAACCTGGACCGCATGGTGCCCATCTCCA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTGCCAGGATGTTTTCTaGCATGGCCGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSCQDVF*HGRGQM
Trigger: CATCTGACCTCGGCCATGGCAGAAAACATCCTGGCA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTTGAACCTACGCTCTTaGCGCAGTACTAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSLNLRS*RSTKAG
Trigger: GCCTGCCTTAGTACTGCGGCAAGAGCGTAGGTTCAA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGTGGGATTAGCCTCCTaGAAAGACTCTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLVGLAS*KDSGIG
Trigger: TCCAATTCCAGAGTCTTTGCAGGAGGCTAATCCCAC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCATTCCCACTCCCAGGCTaGCCAGGGAAGAACTACATT +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSFPLPG*PGKNYI
Trigger: AATGTAGTTCTTCCCTGGGCAGCCTGGGAGTGGGAA...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTCAGAGAGATGCCCTCTaGCTCCGACAGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFQRDAL*LRQAIC
Trigger: GCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTG...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGCTGGGGCTCAGGCTaGAGGCCAGGTGCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGWGSG*RPGAGQ
Trigger: CTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCTGTGCCAAGTGCCGTaGCCGGCGGGAGCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTLCQVP*PAGACH
Trigger: GTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTGCGGGCCCGCTCCTaGAACTCAGGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTLRARS*NSGNCR
Trigger: CCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCGCAA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTCAGATGGGGTGGCGTaGGTCTGGTCATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGISDGVA*VWSSPC
Trigger: GCATGGAGATGACCAGACCCACGCCACCCCATCTGA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACAGGTGCTTGGAGTGTaGCTAGAAACAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLQVLGV*LETALL
Trigger: CAAAAGAGCTGTTTCTAGCCACACTCCAAGCACCTG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGGGGGCTTCTGTAGAATaGGGTCGGGGTGCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMGASVE*GRGASF
Trigger: AAAAGAGGCACCCCGACCCCATTCTACAGAAGCCCC...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGGACAGGACGCTCTCTaGGTTCCAGCTCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFGQDAL*VPAPGH
Trigger: GTGTCCAGGAGCTGGAACCCAGAGAGCGTCCTGTCC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAACACTCCAGGGATTATaGGTTTCTTCCAGGACCGGC +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILETLQGL*VSSRTG
Trigger: GCCGGTCCTGGAAGAAACCCATAATCCCTGGAGTGT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTGTTCTGGGAGCGAGTaGCTCTCCGTGGCCATCCTA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGICSGSE*LSVAIL
Trigger: TAGGATGGCCACGGAGAGCCACTCGCTCCCAGAACA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGAAGTAAGCACGGGGTaGGCACCCTACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSEVSTG*APYLSE
Trigger: CTCTGAAAGGTAGGGTGCCCACCCCGTGCTTACTTC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGGTGGTGTGGCTGGATaGGGTATTGGAGGCCACTTG +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSGGVAG*GIGGHL
Trigger: CAAGTGGCCTCCAATACCCCATCCAGCCACACCACC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCAGAGGCCTGGGGATTaGTCAGATGGAAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGQRPGD*SDGRQR
Trigger: CCTCTGCCTTCCATCTGACCAATCCCCAGGCCTCTG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGTGTGGGAGAGGCCTTaGGCACTGGAGGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFVWERP*ALEVVL
Trigger: CAGCACAACCTCCAGTGCCCAAGGCCTCTCCCACAC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACAGATGTGTGGATGGCTaGGGTGTGGGAGAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDRCVDG*GVGEAL
Trigger: CAAGGCCTCTCCCACACCCCAGCCATCCACACATCT...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTCCAGGAATTCTAGGGTaGCGATTGTCTCTGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSPGILG*RLSLPG
Trigger: ACCTGGCAGAGACAATCGCCACCCTAGAATTCCTGG...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAAGTACTAAGGCAGGCTaGAGGGTGGTCAGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILESTKAG*RVVSSN
Trigger: GTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGATTTTTAAATGGCTGTaGGACAAGGGCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVIFKWL*DKGFGS
Trigger: GCTCCCAAAGCCCTTGTCCCACAGCCATTTAAAAAT...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCGGACTAAAGACCTCTTaGGTTGTCCCTAAATCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAGLKTS*VVPKSW
Trigger: CCAGGATTTAGGGACAACCCAAGAGGTCTTTAGTCC...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTATCTTTCAAATCACGCTaGGGACCAAAACGCACACCC +
Preference number: 4 (lower is better)
Translates to: AEIFHLLLSYGAAETQRVSFKSR*GPKRTP
Trigger: GGGTGTGCGTTTTGGTCCCCAGCGTGATTTGAAAGA...TACACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp GCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTAGTCTCATCCTGCTCCTaGGAATTCATCACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: AEIFHLLLSYGAAETQRVVSSCS*EFITRS
Trigger: GCTTCGAGTGATGAATTCCCAGGAGCAGGATGAGAC...TACACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375677.5
ENST00000375678.7
CDS-3UTR TCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTTTTGCCTGGCTCCGCTaGGCTCTCCACATGCATCGA +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFFAWLR*ALHMHR
Trigger: TCGATGCATGTGGAGAGCTCAGCGGAGCCAGGCAAA...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR TCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTTCTTCTCATCCTTGGTaGTGTGGGGCAGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFSSHPW*CGAGGR
Trigger: CCTCCCACCTGCCCCACATCACCAAGGATGAGAAGA...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR TCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCAGACCATGGACGGATTaGAACTGGTATTCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGARPWTD*NWYSGE
Trigger: TTCACCAGAATACCAGTTTCAATCCGTCCATGGTCT...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACCCCCAGAGGAACCCTaGAGAAATGGCTTGTACTAT +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEPPEEP*RNGLYY
Trigger: ATAGTACAAGCCATTTCTTCAGGGTTCCTCTGGGGG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATTTTATAGAGAGCATTaGGGAGGAAGTCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLFYREH*GGSPHL
Trigger: CAGGTGAGGACTTCCTCCTCAATGCTCTCTATAAAA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACCCGAGTCGCCGTAGGTaGGCAAGCACCAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNPSRRR*ASTSPG
Trigger: TCCGGGACTGGTGCTTGCGCACCTACGGCGACTCGG...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACCTCCGACAGGCCATCTaGCCCCGAGCCCGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNLRQAI*PRARLD
Trigger: GTCAAGACGGGCTCGGGGGCAGATGGCCTGTCGGAG...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAGAAGGCATAGGTCTCTaGGATCGCTCGGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEEGIGL*DRSVGF
Trigger: AAAACCTACCGAGCGATCGCAGAGACCTATGCCTTC...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLYQNPR*SQKSHP
Trigger: AGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGGGTGGAGGAGCCATTaGCGCTGCCACTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTGWRSH*RCHSQR
Trigger: CCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCAGGGTCGCCCTGCGTaGTGCTCGACGTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPQGRPA*CSTWMG
Trigger: ACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTG...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGGGCCACGGCGCCGTTaGCATTCATCTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPGPRRR*HSSRGR
Trigger: CCTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGAGGCTGTGCCAAGTaGCGTGGCCGGCGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGGCAK*RGRREL
Trigger: AAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTACGTGCGGATGCGCTTaGGGGCCCGCTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPTCGCA*GPAPGT
Trigger: AGTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGT...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGCTCTCACAGGCAGCTaGCAGGATGTTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAALTGS*QDVFCH
Trigger: ATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGCGGAGTCCCGCGAGTaGTGCTTGTCCAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTAESRE*CLSRAM
Trigger: CATAGCCCTGGACAAGCAGCACTCGCGGGACTCCGC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGGAGTGGGTGATGGCTaGGGAGTCCCGCGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSGVGDG*GVPRVL
Trigger: CAGCACTCGCGGGACTCCGCAGCCATCACCCACTCC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGGGCTGCAGGTTGCTaGTCAAGGCCCCGTACCCGC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGAAGC*SRPRTR
Trigger: GCGGGTACGGGGCCTTGAGCAGCAACCTGCAGCCCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACAGGGGGCTGCAGGTTaGTGCTCAAGGCCCCGTACC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSQGAAG*CSRPRT
Trigger: GGTACGGGGCCTTGAGCAGCAACCTGCAGCCCCCTG...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAAGGGAGGCAGGGGGCTaGAGGTTGCTGCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSREAGG*RLLLKA
Trigger: GGCCTTGAGCAGCAACCTGCAGCCCCCTGCCTCCCT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGGATTCTAAACAGAGCTaGAGCCCCAGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMDSKQS*SPSALS
Trigger: TGACAAGGCGCTGGGGCTGCAGCTCTGTTTAGAATC...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTGGGTGAGGTCCTCCTaGTTGGCGTTGCCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKWVRSS*LALPRE
Trigger: CTCCCTAGGCAACGCCAAGCAGGAGGACCTCACCCA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGAGGGGCCAGGCCTGTaGACAGAAGTTCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKEGPGL*TEVQTW
Trigger: CCAGGTCTGAACTTCTGTGCACAGGCCTGGCCCCTC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGGGAGTCTGCCACAGTaGCGGGAGGCAGTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSGSLPQ*REAVAT
Trigger: TGTGGCCACTGCCTCCCGGCACTGTGGCAGACTCCC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTTTGAACCTACGCTCTTaGCGCAGTACTAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRALNLRS*RSTKAG
Trigger: GCCTGCCTTAGTACTGCGGCAAGAGCGTAGGTTCAA...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGTTCCCACTCCCAGGCTaGCCAGGGAAGAACTACATT +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMFPLPG*PGKNYI
Trigger: AATGTAGTTCTTCCCTGGGCAGCCTGGGAGTGGGAA...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACTATCTGGAGCCCTGTaGCCCTCCCCGGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSLSGAL*PSPEVG
Trigger: TCCCACCTCCGGGGAGGGGCACAGGGCTCCAGATAG...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACTGTTTGCCTTAAGTaGTTACTATCTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLTVCLK*LLSGAL
Trigger: CAGGGCTCCAGATAGTAAGCACTTAAGGCAAACAGT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCGTCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGGGGTCCACAGGAGGGTaGTGTAGAGGTGAAGTCACA +
Preference number: 4 (lower is better)
Translates to: PSLANELDVTHLDLPLKLGSTGG*CRGEVT
Trigger: TGTGACTTCACCTCTACAGCACCCTCCTGTGGACCC...CAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTGAGCGCACCCAGAACTaGAACTTGCCTTTCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFERTQN*NLPFSP
Trigger: CGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTC...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTGGCACATACACCACTTaGCCCATCTTGGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFGTYTT*PILGSR
Trigger: CCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCC...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTGAGGCTCGTTTTCTTTaGGTTCCAGGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: GFSAILYETKPGGCASGCEARFL*VPGHWS
Trigger: ACTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTC...ACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp GACCTGGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGAATCCCAGAGACCAGTaGAGATGGAGGCTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: DLDLVPFCMKQNQGAVLPNPRDQ*RWRLVF
Trigger: GAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATT...CGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGAGTCTCATCCTGGGCTaGAAGCGAGGCGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKSLILG*KRGGDG
Trigger: CCCATCTCCGCCTCGCTTCCAGCCCAGGATGAGACT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359676.9
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCACAGAAGTCTCATCCTaGGCTGGAAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFTEVSS*AGSEAE
Trigger: CTCCGCCTCGCTTCCAGCCCAGGATGAGACTTCTGT...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359676.9
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCATCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSSSRPG*GSGWRP
Trigger: TGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGA...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp ATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGAGGCCTTGGGACAGGTaGCTCAAGCGGTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: IIDTVLSELRYFTFFFPTRPWDR*LKRWGP
Trigger: CGGGCCCCACCGCTTGAGCCACCTGTCCCAAGGCCT...CGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGCGTGCTGCTCGACGTaGATGGGTTCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTACCST*MGSGWR
Trigger: CCTCCACCCTGAACCCATCCACGTCGAGCAGCACGC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCTAGACGCATCCGCTTaGCTGCCTTTCTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSLDASA*LPFLSR
Trigger: GCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGTGGGCCCATTACTGTaGTTTCCTGTTTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSVGPLL*FPVWRE
Trigger: CTCCCTCCAAACAGGAAACCACAGTAATGGGCCCAC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGTAATTATCTGGGGGTaGGATTCTAACATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLVIIWG*DSNIRV
Trigger: GACCCTGATGTTAGAATCCCACCCCCAGATAATTAC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTAGAGAGCTGCTGTCATaGCTACGGAGTGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIRELLS*LRSVAR
Trigger: CCGTGCAACACTCCGTAGCCATGACAGCAGCTCTCT...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGGTTCATGTCTAGCTTaGGTACTGCCTCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAGSCLA*VLPLGG
Trigger: TCCTCCCAGAGGCAGTACCCAAGCTAGACATGAACC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGTGGGACAAGGGCTTTaGGAGCTCCTTTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAVGQGL*ELLLGE
Trigger: TTCTCCCAAAAGGAGCTCCCAAAGCCCTTGTCCCAC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGCCAGGGTCTGGGCCTaGCTGCAGGACTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IIDTVLSELRYFTFFFPTARVWA*LQDSGL
Trigger: CAGGCCAGAGTCCTGCAGCCAGGCCCAGACCCTGGC...CGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
3UTR CAA 72 bp CTGTCTGCCAAGAAATGCAAACGGTTCATGTCTAGCTaGGGTACTGCCTCTGGGAGGAGAAGTGACACGTTA +
Preference number: 4 (lower is better)
Translates to: LSAKKCKRFMSS*GTASGRRSDTL
Trigger: TAACGTGTCACTTCTCCTCCCAGAGGCAGTACCCAAGCTAGACATGAACCGTTTGCATTTCTTGGCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
3UTR CAA 72 bp TCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATaGTCCTCATGGTCATCGTGGTCATCGTCGTCATCA +
Preference number: 4 (lower is better)
Translates to: SGSMPSESFILS*SSWSSWSSSSS
Trigger: TGATGACGACGATGACCACGATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR TCA 90 bp ATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: IDTVLSELRYFTFFFPTEQVRVS*HPCGVA
Trigger: AGCGACTCCACATGGATGTCAGCTGACCCGCACCTG...CTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR TCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTQVRVS*HPCGVA
Trigger: AGCGACTCCACATGGATGTCAGCTGACCCGCACCTG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp ATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGTGGGGCCCGTCCTCTTaGCTGTGGAGGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: IIDTVLSELRYFTFFFPTWGPSS*LWRFCG
Trigger: CCCGCAGAACCTCCACAGTCAAGAGGACGGGCCCCA...CGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS-3UTR TCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCACAGGTTGATGGGCTaGTCCTCGGCGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKHRLMG*SSAAVV
Trigger: CACCACGGCCGCCGAGGATCAGCCCATCAACCTGTG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTCTTCACCCCGTATTTaGCGCGGCTCCGCAGCCCGT +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPSSPRI*RGSAAR
Trigger: ACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTGCGACGGCAGGACTTaGGGTACGTGCGGATGCGCT +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPCDGRT*GTCGCA
Trigger: AGCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCCGCCTTTCATGCTaGGGTCCGTGGGCCCATTAC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSPRLSC*GPWAHY
Trigger: GTAATGGGCCCACGGACCTCAGCATGAAAGGCGGGG...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTAAATGTACCAACTGGTaGGGCAGGAAGCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIKCTNW*GRKPGP
Trigger: TGGACCTGGCTTCCTGCCTCACCAGTTGGTACATTT...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTCAGTTCCAACAGCTTaGACTCAGAAAAACATGACT +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLSVPTA*TQKNMT
Trigger: AGTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACTCTTGAAAACACATTaGACCTACGCTCTTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSLLKTH*TYALAA
Trigger: TGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACCAATGCCCACTTCTCTaGTGCTACCCTTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDQCPLL*CYPSCG
Trigger: CCCACAAGAAGGGTAGCATCAGAGAAGTGGGCATTG...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAGTGGTGACGGTAAAATaGATTTCAGATGGGTTACAC +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLVVTVK*ISDGLH
Trigger: GTGTAACCCATCTGAAATTCATTTTACCGTCACCAC...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGATCAGAATGTCTCCATaGTTGAGCCAGGGAGGTAAC +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQIRMSP*LSQGGN
Trigger: GTTACCTCCCTGGCTCAATCATGGAGACATTCTGAT...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCCCAGAACTGGAACTTaGCTTTCTCGCCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTPRTGT*LSRRLR
Trigger: CCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACCCCGCTTCAGAGAGATaGCCTCTGGCTCCGACAGGC +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNPASER*PLAPTG
Trigger: GCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGG...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp GAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ELRYFTFFFPTEPLRRSVYQNPR*SQKSHP
Trigger: AGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATA...CACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR GCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGGAAATCATTTCTCTCTaGAGAGACCCTGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQEIISL*RDPGVP
Trigger: AGGAACCCCAGGGTCTCTGCAGAGAGAAATGATTTC...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGCAGGGTCGCCCTaGGTGCTGCTCGACGTGGAT +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPKAGSP*VLLDVD
Trigger: ATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTT...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTGGAACTCAGGGAACTaGCGGCTGCAGGACTCGATG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKWNSGN*RLQDSM
Trigger: CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGAGTCCCGCGAGTGCTaGTTGTCCAGGGCTATGGGC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSESREC*LSRAMG
Trigger: GCCCATAGCCCTGGACAAGCAGCACTCGCGGGACTC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGCGGAGTCCCGCGAGTaGTGCTTGTCCAGGGCTATG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSAESRE*CLSRAM
Trigger: CATAGCCCTGGACAAGCAGCACTCGCGGGACTCCGC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGAGGGAGGCAGGGGGCTaGAGGTTGCTGCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKREAGG*RLLLKA
Trigger: GGCCTTGAGCAGCAACCTGCAGCCCCCTGCCTCCCT...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCGGTGGGGTCAGTTCTaGTGTAGGATGAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGRWGQF*CRMRFS
Trigger: GGAAAACCTCATCCTACAGCAGAACTGACCCCACCG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGGGTGAGGTCCTCCTaGTTGGCGTTGCCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTWVRSS*LALPRE
Trigger: CTCCCTAGGCAACGCCAAGCAGGAGGACCTCACCCA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCAAGGGGATGGGAGCTaGAGCCCGCCCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKQGDGS*SPPWSS
Trigger: TGAGCTCCAGGGCGGGCTGCAGCTCCCATCCCCTTG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTTCATCCCACAGCTCTaGAGCAAAGTCCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDFIPQL*SKVLPS
Trigger: GGAAGGCAGGACTTTGCTGCAGAGCTGTGGGATGAA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CCGTCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGTTAAAGAGCTCTGTCTaGTACTCTGGCGACCCGCCT +
Preference number: 4 (lower is better)
Translates to: PSLANELDVTHLDLPLKLLKSSV*YSGDPP
Trigger: AGGCGGGTCGCCAGAGTAGCAGACAGAGCTCTTTAA...CAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp AGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGTGCGTTTGTGCGGTTTTGTaGTTCATTCTTCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SAILYETKPGGCASGCLCVCAVL*FILHGH
Trigger: GTGCCCATGAAGAATGAAGCACAAAACCGCACAAAC...GCACAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGGCACATACACCACTTaGCCCATCTTGGGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKGTYTT*PILGSR
Trigger: CCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGGAGGCTCGTTTTCTTTaGGTTCCAGGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLEARFL*VPGHWS
Trigger: ACTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTC...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp GGTGACCTGGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTAGAGACCAGTGGAGATaGAGGCTCGTTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GDLDLVPFCMKQNQGAVLRDQWR*RLVFFG
Trigger: CCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCT...AAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCCAGGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAATCCCAGAGACCAGTaGAGATGGAGGCTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLNPRDQ*RWRLVF
Trigger: GAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATT...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCGCATCCTCTCGTCCTaGCTGGGGCTCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKRILSS*LGLRLE
Trigger: CTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGGATGGGTTCAGGGTaGAGGAGCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTWMGSG*RSHCRC
Trigger: GCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGCTGCTCGACGTGGATaGGTTCAGGGTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSAARRG*VQGGGA
Trigger: GGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGGGCTGCTTGGAGATaGGCACCATGCGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTWAAWR*APCGPG
Trigger: ACCTGGACCGCATGGTGCCCATCTCCAAGCAGCCCA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCCCTGGATCTTCTCCTTaGGCTGCTTGGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFPGSSP*AAWRWA
Trigger: TGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGG...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGACTCGATGATGGCCTaGATCTTCTCCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFDSMMA*IFSLGC
Trigger: GCAGCCCAAGGAGAAGATCCAGGCCATCATCGAGTC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAATGGCCGAGGTCAGATaGGGTGGCGTGGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSMAEVR*GGVGLV
Trigger: GACCAGACCCACGCCACCCCATCTGACCTCGGCCAT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACGCTCCAGGTGCCGGTaGGGTCAGTTCTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSRSRCR*GQFCCR
Trigger: CCTACAGCAGAACTGACCCCACCGGCACCTGGAGCG...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTGCAACAGGATGGCCTaGCCAAGGGCTAGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPCNRMA*PRASGH
Trigger: GTGGCCGCTAGCCCTTGGCCAGGCCATCCTGTTGCA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGAGGGCTGCAGTGGCTaGTTAGGGACAGGACGCTCT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTEGCSG*LGTGRS
Trigger: AGAGCGTCCTGTCCCTAACCAGCCACTGCAGCCCTC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCCTTTACTCCAAACATaGCGCAAGGGGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGPLLQT*RKGMGA
Trigger: AGCTCCCATCCCCTTGCGCCATGTTTGGAGTAAAGG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCATGGATGGCTGGGGTGTaGGAGAGGCCTTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSWMAGV*ERPWAL
Trigger: CAGTGCCCAAGGCCTCTCCCACACCCCAGCCATCCA...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTAGCCCACCCAAGAGGTaGGGTCGACATGATGAAATC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSSPPKR*GRHDEI
Trigger: GATTTCATCATGTCGACCCCACCTCTTGGGTGGGCT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGTGGGACAAGGGCTTTaGGAGCTCCTTTTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIVGQGL*ELLLGE
Trigger: TTCTCCCAAAAGGAGCTCCCAAAGCCCTTGTCCCAC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGCAGAAGATTTTTAAATaGCTGTGGGACAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVQKIFK*LWDKGF
Trigger: AAAGCCCTTGTCCCACAGCCATTTAAAAATCTTCTG...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGATGACTTATGAGGGCTaGAGGGAGGAGTACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VIRAEIFHLLLSYGAAETMTYEG*REEYCP
Trigger: TGGACAGTACTCCTCCCTCCAGCCCTCATAAGTCAT...CGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGTCTCATCCTGCTCCTaGGAATTCATCACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAVSSCS*EFITRS
Trigger: GCTTCGAGTGATGAATTCCCAGGAGCAGGATGAGAC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CCA 90 bp GATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTGTGCTTCATTCTTCATaGGCACAGATGAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: DLVPFCMKQNQGAVLPAVVLHSS*AQMSTV
Trigger: CACCGTGCTCATCTGTGCCCATGAAGAATGAAGCAC...AACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR TCA 90 bp TCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGAAATTTGCCTGGCTCCGCTaGGCTCTCCACATGCATCGA +
Preference number: 4 (lower is better)
Translates to: SLANELDVTHLDLPLKLKFAWLR*ALHMHR
Trigger: TCGATGCATGTGGAGAGCTCAGCGGAGCCAGGCAAA...TTTCAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTAAGTGCATCCTCTTCTaGCACTCCGTACAGCTCATC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSKCILF*HSVQLI
Trigger: GATGAGCTGTACGGAGTGTCAGAAGAGGATGCACTT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGCTTGTCACACAGGTTaGTGGGCTGATCCTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSACHTG*WADPRR
Trigger: CCGCCGAGGATCAGCCCATCAACCTGTGTGACAAGC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCGCGGTAACTGTAGTTaGGGCCGCCGTTGGCGTACA +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPRGNCS*GRRWRT
Trigger: TGTACGCCAACGGCGGCCTCAACTACAGTTACCGCG...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGGGGATACATCCTTCTaGTCAGACAGACACAGACTA +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAGDTSF*SDRHRL
Trigger: TAGTCTGTGTCTGTCTGATCAGAAGGATGTATCCCC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCTCTTGAAAACACATTaGACCTACGCTCTTGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSLLKTH*TYALAA
Trigger: TGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCCCCCAGAGGAACCCTaGAGAAATGGCTTGTACTAT +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGPPEEP*RNGLYY
Trigger: ATAGTACAAGCCATTTCTTCAGGGTTCCTCTGGGGG...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCATTTTATAGAGAGCATTaGGGAGGAAGTCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: PGLAALVGIALSKRKCLSFYREH*GGSPHL
Trigger: CAGGTGAGGACTTCCTCCTCAATGCTCTCTATAAAA...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CCGTCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGCAACGGCGCTACATTTaGGGATGTCATCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSLANELDVTHLDLPLKLQRRYI*GCHLLQ
Trigger: TTGGAGGAGATGACATCCTCAAATGTAGCGCCGTTG...CAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACCCCAGAACTGGAACTTaGCTTTCTCGCCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNPRTGT*LSRRLR
Trigger: CCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGG...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACTTCTTCTGCCCAGCGTaGTTGGGGGCTTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNFFCPA*LGALPG
Trigger: GCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAA...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp AGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTTATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RAEIFHLLLSYGAAETQRYQNPR*SQKSHP
Trigger: AGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATA...ACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR GCA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGGAAATCATTTCTCTCTaGAGAGACCCTGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLEIISL*RDPGVP
Trigger: AGGAACCCCAGGGTCTCTGCAGAGAGAAATGATTTC...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCAGGAGCCATTGCCGCTaGCACTCTCAGAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTRSHCR*HSQRRS
Trigger: ACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCT...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGTCGCCCTGCGTGCTaGTCGACGTGGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGRPAC*STWMGS
Trigger: TGAACCCATCCACGTCGAGCAGCACGCAGGGCGACC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGAGTCCCGCGAGTGCTaGTTGTCCAGGGCTATGGGC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKESREC*LSRAMG
Trigger: GCCCATAGCCCTGGACAAGCAGCACTCGCGGGACTC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCAACCCTTCCAGAGCTaGCCCGTTGGCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTQPFQS*PVGLFQ
Trigger: TTGGAAGAGGCCAACGGGGCAGCTCTGGAAGGGTTG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTAGCACTGGTAGGTATTaGACTGAGCAAGAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRASTGRY*TEQEEV
Trigger: CACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGGCAGTGGCCACAGCTaGAACAGGCAATTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTGSGHS*NRQLAA
Trigger: TGCAGCCAATTGCCTGTTGCAGCTGTGGCCACTGCC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGGGCACTGGAGGTTGTaGTGTGCTAAGGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKGHWRL*CAKGES
Trigger: AGACTCACCCTTAGCACAGCACAACCTCCAGTGCCC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACTGTCTGCCAAGAAATaGAAACGGTTCATGTCTAGC +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILELSAKK*KRFMSS
Trigger: GCTAGACATGAACCGTTTGCATTTCTTGGCAGACAG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGATGAGCTTAGTGAGGTaGATCTTCCTCCTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMMSLVR*IFLLKS
Trigger: GCTCTTGAGGAGGAAGATGCACCTCACTAAGCTCAT...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTATGAGCTTAGTGAGGTaGATCTTCCTCCTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAMSLVR*IFLLKS
Trigger: GCTCTTGAGGAGGAAGATGCACCTCACTAAGCTCAT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACCTTTAAAAGTTGGTaGCATCCACTGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLTFKSW*HPLFAL
Trigger: TAAGGCAAACAGTGGATGGCACCAACTTTTAAAGGT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTACCTTTAAAAGTTGGTaGCATCCACTGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVTFKSW*HPLFAL
Trigger: TAAGGCAAACAGTGGATGGCACCAACTTTTAAAGGT...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AGTGGTGACCTGGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGGCTTCCGGCTGTTTGTaGGGTTTTGTGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SGDLDLVPFCMKQNQGAVASGCL*GFVLHS
Trigger: AGAATGAAGCACAAAACCGCACAAACAGCCGGAAGC...CACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCCAGGTCACCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCATGGATGGGTTCAGGGTaGAGGAGCCATTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSWMGSG*RSHCRC
Trigger: GCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCA...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCCAGAGCTGCCCCGTTaGCCTCTTCCAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPPELPR*PLPSRS
Trigger: TGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGG...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGCTCAGGGCACATCCTaGAAAAAGCCCACGCTGGAG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTAQGTS*KKPTLE
Trigger: CTCCAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTGGGGATTGGTCAGATaGAAGGCAGAGGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKWGLVR*KAEVVW
Trigger: CCACACCACCTCTGCCTTCCATCTGACCAATCCCCA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGTCCTGGAGGGGCCTaGGAGGCCCAATGGACTTTA +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTCPGGA*EAQWTL
Trigger: TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCAGAAGATTTTTAAATaGCTGTGGGACAAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAQKIFK*LWDKGF
Trigger: AAAGCCCTTGTCCCACAGCCATTTAAAAATCTTCTG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGATCTCATCTCAGATATaGAACTCATGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLISSQI*NSCSSK
Trigger: TTTGGAAGAGCATGAGTTCCATATCTGAGATGAGAT...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp CCGTCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGGTCTCATCCTGCTCCTaGGAATTCATCACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PSLANELDVTHLDLPLKLVSSCS*EFITRS
Trigger: GCTTCGAGTGATGAATTCCCAGGAGCAGGATGAGAC...CAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGAGTCATCGTCCTCTTaGCTGTGGAGGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPESSSS*LWRFCG
Trigger: CCCGCAGAACCTCCACAGTCAAGAGGACGATGACTC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGGCTGCAGGACTCGATaGTGGCCTGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSGCRTR*WPGSSP
Trigger: AGGAGAAGATCCAGGCCATCATCGAGTCCTGCAGCC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTATCCTGAAGGCAACATaGGTCATTCTGACCTTCCCA +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSILKAT*VILTFP
Trigger: TGGGAAGGTCAGAATGACTCATGTTGCCTTCAGGAT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGTATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQYQNPR*SQKSHP
Trigger: AGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATA...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR GCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEYQNPR*SQKSHP
Trigger: AGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTGGAGATGGGCACCATaGGGTCCAGGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPWRWAP*GPGSRP
Trigger: TGGACGAGAACCTGGACCGCATGGTGCCCATCTCCA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTGGAACTCAGGGAACTaGCGGCTGCAGGACTCGATG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPWNSGN*RLQDSM
Trigger: CATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGATGGCTTGTACTATCTaGACTGAAAGTCTTAAATCT +
Preference number: 4 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMMACTI*TESLKS
Trigger: AGATTTAAGACTTTCAGTGCAGATAGTACAAGCCAT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTGAGGCTCGTTTTCTTTaGGTTCCAGGCCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFEARFL*VPGHWS
Trigger: ACTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTC...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp ATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGAGACCCTGGGGTTCCTaGCCCGTAGAGAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IIDTVLSELRYFTFFFPTRPWGS*PVERCP
Trigger: TGGACACCTCTCTACGGGCCAGGAACCCCAGGGTCT...CGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGISSWSS*SSSSSS
Trigger: AGATGATGACGACGATGACCACGATGACCATGAGGA...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTCAGATGGGGTGGCGTaGGTCTGGTCATCTCCATGC +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPSDGVA*VWSSPC
Trigger: GCATGGAGATGACCAGACCCACGCCACCCCATCTGA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCGAGGTCAGATGGGGTaGCGTGGGTCTGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKRGQMG*RGSGHL
Trigger: GAGATGACCAGACCCACGCCACCCCATCTGACCTCG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCTGTGGTTTCCTGTTTaGAGGGAGGCAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKLWFPV*REAGGC
Trigger: GCAGCCCCCTGCCTCCCTCCAAACAGGAAACCACAG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGCTCAGGGCACATCCTaGAAAAAGCCCACGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPAQGTS*KKPTLE
Trigger: CTCCAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCAGAGAGCTGCTGTCATaGCTACGGAGTGTTGCACGG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTRELLS*LRSVAR
Trigger: CCGTGCAACACTCCGTAGCCATGACAGCAGCTCTCT...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGAAGGGGTGCCTGTTCTaGGAGCGAGTGGCTCTCCGT +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKKGCLF*ERVALR
Trigger: ACGGAGAGCCACTCGCTCCCAGAACAGGCACCCCTT...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGAAGTAAGCACGGGGTaGGCACCCTACCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTEVSTG*APYLSE
Trigger: CTCTGAAAGGTAGGGTGCCCACCCCGTGCTTACTTC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGATCTAATCCTTGTGTaGGTAGGGGGAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPDLILV*VGGGSP
Trigger: GGGGCTCCCTCCCCCTACCCACACAAGGATTAGATC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGTCACCTTTAAAAGTTaGTGCCATCCACTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSVTFKS*CHPLFA
Trigger: GGCAAACAGTGGATGGCACCAACTTTTAAAGGTGAC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGTTTGCCTGGCTCCGCTaGGCTCTCCACATGCATCGA +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKFAWLR*ALHMHR
Trigger: TCGATGCATGTGGAGAGCTCAGCGGAGCCAGGCAAA...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGAGTCATCGTCCTCTTaGCTGTGGAGGTTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKESSSS*LWRFCG
Trigger: CCCGCAGAACCTCCACAGTCAAGAGGACGATGACTC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGCTGCAGGACTCGATaGTGGCCTGGATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGCRTR*WPGSSP
Trigger: AGGAGAAGATCCAGGCCATCATCGAGTCCTGCAGCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCACGAATTCAAATGTTaGGTAGTACTGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSHEFKC*VVLSRW
Trigger: CCACCTGCTCAGTACTACTCAACATTTGAATTCGTG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTAATGGACCACATAATTaGGGCATATGGGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSNGPHN*GIWAIY
Trigger: GTAGATGGCCCATATGCCTCAATTATGTGGTCCATT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGAAACAGTTTCCCCCTGTGTaGGCAGACACCATAGGCATA +
Preference number: 4 (lower is better)
Translates to: SLANELDVTHLDLPLKLKQFPPV*ADTIGI
Trigger: TATGCCTATGGTGTCTGCTCACACAGGGGGAAACTG...TTTCAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGCTCTCACAGGCAGCTaGCAGGATGTTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTALTGS*QDVFCH
Trigger: ATGGCAGAAAACATCCTGGCAGCTGCCTGTGAGAGC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAACGCATCCGCTTGGCTaGCTTTCTTGTCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSTHPLG*LSCLAL
Trigger: GAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCTGTCTGCCAAGAAATaGAAACGGTTCATGTCTAGC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSLSAKK*KRFMSS
Trigger: GCTAGACATGAACCGTTTGCATTTCTTGGCAGACAG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTGTGCCATCCACTGTTTaGCTTAAGTGCTTACTATCT +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAVPSTV*LKCLLS
Trigger: AGATAGTAAGCACTTAAGGCAAACAGTGGATGGCAC...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGACAGAAGTCTCATCCTaGGCTGGAAGCGAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IIDTVLSELRYFTFFFPTTEVSS*AGSEAE
Trigger: CTCCGCCTCGCTTCCAGCCCAGGATGAGACTTCTGT...CGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326071.8
CDS-3UTR CCA 90 bp CAAATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTTCTCTGCAGAGACCCTaGGGTTCCTGGCCCGTAGAG +
Preference number: 4 (lower is better)
Translates to: QIIDTVLSELRYFTFFFPSLQRP*GSWPVE
Trigger: CTCTACGGGCCAGGAACCCCAGGGTCTCTGCAGAGA...AGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGACTCGATGATGGCCTaGATCTTCTCCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPDSMMA*IFSLGC
Trigger: GCAGCCCAAGGAGAAGATCCAGGCCATCATCGAGTC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGGATGTTTTCTGCCATaGCCGAGGTCAGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSGCFLP*PRSDGV
Trigger: CACCCCATCTGACCTCGGCCATGGCAGAAAACATCC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACTAGACGCATCCGCTTaGCTGCCTTTCTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSLDASA*LPFLSR
Trigger: GCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAG...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGTAATTATCTGGGGGTaGGATTCTAACATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIVIIWG*DSNIRV
Trigger: GACCCTGATGTTAGAATCCCACCCCCAGATAATTAC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCTCACCCTGAAGAAGTaGCCCCTCTTGGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKLTLKK*PLLAGV
Trigger: CACTCCTGCCAAGAGGGGCCACTTCTTCAGGGTGAG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCATGGCTGCAGAAAAGCTaGTTTGGGAAGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSWLQKS*FGKGCL
Trigger: CAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCA...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTGGCTGCAGAAAAGCTaGTTTGGGAAGGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPWLQKS*FGKGCL
Trigger: CAGGCACCCCTTCCCAAACCAGCTTTTCTGCAGCCA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGTAGTACTGAGCAGGTaGGGCCAGATGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSVVLSR*GQMCGW
Trigger: CCATCCACACATCTGGCCCCACCTGCTCAGTACTAC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAACAAAGACTCTGGAATTaGAGTATCCTACTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEQRLWN*SILLLH
Trigger: ATGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTG...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTCTCCTGCAAAGACTCTaGAATTGGAGTATCCTACTC +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGILLQRL*NWSILL
Trigger: GAGTAGGATACTCCAATTCCAGAGTCTTTGCAGGAG...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGGAACCCTGAAGAAATaGCTTGTACTATCTGCACTG +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIGTLKK*LVLSAL
Trigger: CAGTGCAGATAGTACAAGCCATTTCTTCAGGGTTCC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGAGGTAGAATACAGGTaGCCATGGACTGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSEVEYR*PWTGAS
Trigger: AGAAGCCCCAGTCCATGGTCACCTGTATTCTACCTC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCCACGAATTCAAATGTTaGGTAGTACTGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFHEFKC*VVLSRW
Trigger: CCACCTGCTCAGTACTACTCAACATTTGAATTCGTG...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGAACGTAGGTAAAAAGTaGGAGGTTTTTGTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMNVGKK*EVFVCG
Trigger: GCCACAAACAAAAACCTCTCACTTTTTACCTACGTT...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGTTTTTCAGCCAATCTaGGTTCTACGTGGTATAGGT +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIVFQPI*VLRGIG
Trigger: ACCTATACCACGTAGAACTCAGATTGGCTGAAAAAC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGACGCATCCGCTTGGCTaGCTTTCTTGTCTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKTHPLG*LSCLAL
Trigger: GAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGT...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGATTCTAAACAGAGCTaGAGCCCCAGCGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPDSKQS*SPSALS
Trigger: TGACAAGGCGCTGGGGCTGCAGCTCTGTTTAGAATC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGGCACTGGAGGTTGTaGTGTGCTAAGGGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGHWRL*CAKGES
Trigger: AGACTCACCCTTAGCACAGCACAACCTCCAGTGCCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGGTGGCGATTGTCTCTaGCAGGTTTTAACATTAAGA +
Preference number: 4 (lower is better)
Translates to: FSDATLLVGLASCKDSGIGGDCL*QVLTLR
Trigger: TCTTAATGTTAAAACCTGGCAGAGACAATCGCCACC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGAAACCTGGATTCCATGTGTaGTACACCCTAGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SLANELDVTHLDLPLKLKPGFHV*YTLGEE
Trigger: TTCTTCCCCTAGGGTGTAGCACACATGGAATCCAGG...TTTCAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCCTGGATCTTCTCCTTaGGCTGCTTGGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKPGSSP*AAWRWA
Trigger: TGCCCATCTCCAAGCAGCCCAAGGAGAAGATCCAGG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGCAGGTGACCATGGACTaGGGCTTCTGTAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKQVTMD*GFCRMG
Trigger: CCCCATTCTACAGAAGCCCCAGTCCATGGTCACCTG...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAAGTACTAAGGCAGGCTaGAGGGTGGTCAGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSSTKAG*RVVSSN
Trigger: GTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCACTGAGCCAGCTAAATaGAATCCTGTTTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFTEPAK*NPVSMQ
Trigger: CTGCATGGAAACAGGATTCCATTTAGCTGGCTCAGT...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCAAAGACTCTGGAATTaGAGTATCCTACTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAQRLWN*SILLLH
Trigger: ATGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACAAGTGCATCCTCTTCTaGCACTCCGTACAGCTCATC +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNKCILF*HSVQLI
Trigger: GATGAGCTGTACGGAGTGTCAGAAGAGGATGCACTT...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR TCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACTCAGGTAGGTGGAGGTaGGGGGCATGTTGTAATCAA +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNSGRWR*GACCNQ
Trigger: TTGATTACAACATGCCCCTCACCTCCACCTACCTGA...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR TCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTGCTCACCTAAGACTTaGAAGGTAATTATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKCSPKT*KVIIWG
Trigger: CCCCCAGATAATTACCTTTCAAGTCTTAGGTGAGCA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTCAGTTCCAACAGCTTaGACTCAGAAAAACATGACT +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDSVPTA*TQKNMT
Trigger: AGTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGAACGTAGGTAAAAAGTaGGAGGTTTTTGTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: NGILFPCRNLLLILPSLGNVGKK*EVFVCG
Trigger: GCCACAAACAAAAACCTCTCACTTTTTACCTACGTT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGTTTTTCAGCCAATCTaGGTTCTACGTGGTATAGGT +
Preference number: 4 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFVFQPI*VLRGIG
Trigger: ACCTATACCACGTAGAACTCAGATTGGCTGAAAAAC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CCGTCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGGATTTTGAGAACTGCTaGTCAGAATGTCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: PSLANELDVTHLDLPLKLDFENC*SECLHD
Trigger: ATCATGGAGACATTCTGATCAGCAGTTCTCAAAATC...CAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp ATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGAGGAGAACCCAAATCTaGTGTGCTGGGGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: IDTVLSELRYFTFFFPTERRTQI*CAGGFN
Trigger: GTTAAAACCCCCAGCACATCAGATTTGGGTTCTCCT...CTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACGAAGGCATAGGTCTCTaGGATCGCTCGGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNEGIGL*DRSVGF
Trigger: AAAACCTACCGAGCGATCGCAGAGACCTATGCCTTC...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGACGCTCAGGGTCCATaGCTTCAGAGTCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKDAQGP*LQSRSS
Trigger: AGATGAACGACTCTGAAGGCATGGACCCTGAGCGTC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGTGCCAGGATGTTTTCTaGCATGGCCGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKCQDVF*HGRGQM
Trigger: CATCTGACCTCGGCCATGGCAGAAAACATCCTGGCA...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR GCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGTTTTCCAGTTCATCTaGAGAGCGCAGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKVFQFI*RAQQEG
Trigger: GCCTTCCTGCTGCGCTCTGCAGATGAACTGGAAAAC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACAGAGACCAGTGGAGATaGAGGCTCGTTTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNRDQWR*RLVFFG
Trigger: CCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCT...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACAATCCCAGAGACCAGTaGAGATGGAGGCTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNNPRDQ*RWRLVF
Trigger: GAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATT...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACTGCAATGGGGCGATCTaGCAGACACTTCCCAATCAA +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNCNGAI*QTLPNQ
Trigger: TTGATTGGGAAGTGTCTGCCAGATCGCCCCATTGCA...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACGTGATGTGGGGCAGGTaGGAGGCTTTATTTATCCAC +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNVMWGR*EALFIH
Trigger: GTGGATAAATAAAGCCTCCCACCTGCCCCACATCAC...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCCTCATGGTCATCGTaGTCATCGTCGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTSSWSS*SSSSSS
Trigger: AGATGATGACGACGATGACCACGATGACCATGAGGA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGTGGGCCCATTACTGTaGTTTCCTGTTTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKVGPLL*FPVWRE
Trigger: CTCCCTCCAAACAGGAAACCACAGTAATGGGCCCAC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCCAGGTGCTTGGAGTGTaGCTAGAAACAGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTQVLGV*LETALL
Trigger: CAAAAGAGCTGTTTCTAGCCACACTCCAAGCACCTG...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGCTCCTGCAAAGACTCTaGAATTGGAGTATCCTACTC +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKLLQRL*NWSILL
Trigger: GAGTAGGATACTCCAATTCCAGAGTCTTTGCAGGAG...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGTCAGGTAGGTGGAGGTaGGGGGCATGTTGTAATCAA +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKSGRWR*GACCNQ
Trigger: TTGATTACAACATGCCCCTCACCTCCACCTACCTGA...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR TCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGTGGGTTCCACCTGTTTaGAATCCTCGAAAACCCTCC +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKWVPPV*NPRKPS
Trigger: GGAGGGTTTTCGAGGATTTCAAACAGGTGGAACCCA...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAAAGAGGTCTCTCTTCTaGCTCCTGCTCCTAAATGGA +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSKRSLF*LLLLNG
Trigger: TCCATTTAGGAGCAGGAGTCAGAAGAGAGACCTCTT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACAACATGTCTAAATTATaGCAGAGGACTAAAGACCTC +
Preference number: 4 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDNMSKL*QRTKDL
Trigger: GAGGTCTTTAGTCCTCTGGCATAATTTAGACATGTT...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTAACATGTCTAAATTATaGCAGAGGACTAAAGACCTC +
Preference number: 4 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSNMSKL*QRTKDL
Trigger: GAGGTCTTTAGTCCTCTGGCATAATTTAGACATGTT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTATTGTGTGGGGGAGTTaGGGTTACAGCTGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPIVWGS*GYSCSE
Trigger: TTCTGAACAGCTGTAACCCCAACTCCCCCACACAAT...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCATGCTCACCTAAGACTTaGAAGGTAATTATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSCSPKT*KVIIWG
Trigger: CCCCCAGATAATTACCTTTCAAGTCTTAGGTGAGCA...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR TCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAGACCATGGACGGATTaGAACTGGTATTCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPRPWTD*NWYSGE
Trigger: TTCACCAGAATACCAGTTTCAATCCGTCCATGGTCT...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGTGCCATCCACTGTTTaGCTTAAGTGCTTACTATCT +
Preference number: 4 (lower is better)
Translates to: EEERVHFAFLNKYAILLTVPSTV*LKCLLS
Trigger: AGATAGTAAGCACTTAAGGCAAACAGTGGATGGCAC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CCA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGTTGTCATTGTCCTCATaGTCATCGTGGTCATCGTCG +
Preference number: 4 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKLSLSS*SSWSSS
Trigger: CGACGATGACCACGATGACCATGAGGACAATGACAA...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGTAATTATCTGGGGGTaGGATTCTAACATCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPVIIWG*DSNIRV
Trigger: GACCCTGATGTTAGAATCCCACCCCCAGATAATTAC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGTCACCTTTAAAAGTTaGTGCCATCCACTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSVTFKS*CHPLFA
Trigger: GGCAAACAGTGGATGGCACCAACTTTTAAAGGTGAC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR TCA 90 bp CAAATAATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTGAATGTCTCCATGATTaGGCCAGGGAGGTAACTCTT +
Preference number: 4 (lower is better)
Translates to: QIIDTVLSELRYFTFFFPECLHD*AREVTL
Trigger: AAGAGTTACCTCCCTGGCTCAATCATGGAGACATTC...AGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAATTATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR TCA 90 bp TCCTTGGCTAATGAATTAGACGTCACACACCTAGATCTTCCCCTAAAACTGAAAATGCAAGACAGATTTTaGGAACTGCTGATCAGAATG +
Preference number: 4 (lower is better)
Translates to: SLANELDVTHLDLPLKLKMQDRF*ELLIRM
Trigger: CATTCTGATCAGCAGTTCTCAAAATCTGTCTTGCAT...TTTCAGTTTTAGGGGAAGATCTAGGTGTGTGACGTCTAATTCATTAGCCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR GCA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGATGGCTTGTACTATCTaGACTGAAAGTCTTAAATCT +
Preference number: 4 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKMACTI*TESLKS
Trigger: AGATTTAAGACTTTCAGTGCAGATAGTACAAGCCAT...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACATCCACACATGCTGGTaGCCAATAATGATTTTTAGA +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNIHTCW*PIMIFR
Trigger: TCTAAAAATCATTATTGGGCACCAGCATGTGTGGAT...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAATCTCATCTCAGATATaGAACTCATGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSISSQI*NSCSSK
Trigger: TTTGGAAGAGCATGAGTTCCATATCTGAGATGAGAT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR GCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACTTATTTATCCACACATaGTGGTGCCCAATAATGATT +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNLFIHT*WCPIMI
Trigger: AATCATTATTGGGCACCAGCATGTGTGGATAAATAA...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CCA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACTTTATCCACACATGCTaGTGCCCAATAATGATTTTT +
Preference number: 4 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNFIHTC*CPIMIF
Trigger: AAAAATCATTATTGGGCACCAGCATGTGTGGATAAA...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS GCA 90 bp CGCTGCCCAGGCGGAAGCCCTTGGAGCGCACCCAGAACTGGAACTTaGCTTTCTCGCCGGCTGCGGGGCCGCTGCCCGCGCCAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: RCPGGSPWSAPRTGT*LSRRLRGRCPRQSR
Trigger: GCGGGACTGGCGCGGGCAGCGGCCCCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS CCA 90 bp TCCCGGCCGCTGCCCAGGCGGAAGCCCTTGGAGCGCACCCAGAACTaGAACTTGCCTTTCTCGCCGGCTGCGGGGCCGCTGCCCGCGCCA +
Preference number: 5 (lower is better)
Translates to: SRPLPRRKPLERTQN*NLPFSPAAGPLPAP
Trigger: TGGCGCGGGCAGCGGCCCCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGGCCGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS TCA 90 bp CCAAGTGCCGTGGCCGGCGGGAGCTTGTCACACAGGTTGATGGGCTaGTCCTCGGCGGCCGTGGTGAAGTCCATGGGGGCCACGGCGCCG +
Preference number: 5 (lower is better)
Translates to: PSAVAGGSLSHRLMG*SSAAVVKSMGATAP
Trigger: CGGCGCCGTGGCCCCCATGGACTTCACCACGGCCGCCGAGGATCAGCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCACGGCACTTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CCA 90 bp GAGTACTGTCCAGCATCCCCGGACGGACAGGCCAGGGTCTGGGCCTaGCTGCAGGACTCTGGCCTGGCGGGGGCAGGGAGAGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: EYCPASPDGQARVWA*LQDSGLAGAGRGST
Trigger: TGTGGACCCTCTCCCTGCCCCCGCCAGGCCAGAGTCCTGCAGCCAGGCCCAGACCCTGGCCTGTCCGTCCGGGGATGCTGGACAGTACTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS GCA 90 bp CGGCGCCGTTGCCATTCATCTCGGGGAAGGCAGGGTCGCCCTGCGTaGTGCTCGACGTGGATGGGTTCAGGGTGGAGGAGCCATTGCCGC +
Preference number: 5 (lower is better)
Translates to: RRRCHSSRGRQGRPA*CSTWMGSGWRSHCR
Trigger: GCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCAACGGCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 90 bp CCCGTCGGCACCGCAGCCATCCGAGGGGTAGGAGGCTGTGCCAAGTaGCGTGGCCGGCGGGAGCTTGTCACACAGGTTGATGGGCTGATC +
Preference number: 5 (lower is better)
Translates to: PVGTAAIRGVGGCAK*RGRRELVTQVDGLI
Trigger: GATCAGCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCTCGGATGGCTGCGGTGCCGACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CCA 90 bp CTTGGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCGGAAGCCCTTaGAGCGCACCCAGAACTGGAACTTGCCTTTCTCGCCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LGPSWVPGRCPGGSP*SAPRTGTCLSRRLR
Trigger: CCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS CCA 90 bp AGGCCATCTGCCCCCGAGCCCGTCTTGACCGGCACATACACCACTTaGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCGGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: RPSAPEPVLTGTYTT*PILGSRPLPRRKPL
Trigger: CAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGCAGATGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000201961.6
ENST00000621426.6
CDS-3UTR CAA 90 bp CGGGCCCGCTCCTGGAACTCAGGGAACTGCCGGCTGCAGGACTCGATGATGGCCGTGGCCGGCGGGAGCTaGTCACACAGGTTGATGGGC +
Preference number: 5 (lower is better)
Translates to: RARSWNSGNCRLQDSMMAVAGGS*SHRLMG
Trigger: GCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCAC...GGCCATCATCGAGTCCTGCAGCCGGCAGTTCCCTGAGTTCCAGGAGCGGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS GCA 90 bp CGCCGTTGCCATTCATCTCGGGGAAGGCAGGGTCGCCCTGCGTGCTaGTCGACGTGGATGGGTTCAGGGTGGAGGAGCCATTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RRCHSSRGRQGRPAC*STWMGSGWRSHCRC
Trigger: GCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCAACGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 90 bp GCCACGGCGCCGTTGCCATTCATCTCGGGGAAGGCAGGGTCGCCCTaGGTGCTGCTCGACGTGGATGGGTTCAGGGTGGAGGAGCCATTG +
Preference number: 5 (lower is better)
Translates to: ATAPLPFISGKAGSP*VLLDVDGFRVEEPL
Trigger: CAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCAACGGCGCCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp ATCGTGGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGGCCCACTGTCAGGTCGGGGCCACGGCGCCGTaGCCATTCATCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: IVVIVVIICRRGPAHCQVGATAP*PFISGK
Trigger: CTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCCC...GACCTGACAGTGGGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CAA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCGTCTTCACCCCGTATTaGACGCGGCTCCGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRAVFTPY*TRLRSP
Trigger: CGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGAC...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ATCGTGGTCATCGTCGTCATCATCTGCCGTCGGGGCCCGGCCCACTGTCAGGTCTACGTGCGGATGCGCTaGCGGGCCCGCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: IVVIVVIICRRGPAHCQVYVRMR*RARSWN
Trigger: GTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGTA...GACCTGACAGTGGGCCGGGCCCCGACGGCAGATGATGACGACGATGACCACGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS CCA 90 bp CTTGACTGTGGAGGTTCTGCGGGCTCCGCATCCTCTCGTCCTGGCTaGGGCTCAGGCTGGAGGCCAGGTGCGGGTCAGCTGACATCCATG +
Preference number: 5 (lower is better)
Translates to: LDCGGSAGSASSRPG*GSGWRPGAGQLTSM
Trigger: CATGGATGTCAGCTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGCCAGGACGAGAGGATGCGGAGCCCGCAGAACCTCCACAGTCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000326071.8
ENST00000359676.9
ENST00000375677.5
ENST00000375678.7
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CCA 90 bp CATCTCGGGGAAGGCAGGGTCGCCCTGCGTGCTGCTCGACGTGGATaGGTTCAGGGTGGAGGAGCCATTGCCGCTGCCACTCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: HLGEGRVALRAARRG*VQGGGAIAAATLRG
Trigger: TCCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp CTGCCAACCGGCTGCCATCTCCCAGCAGTCCGTCCTGTCAAGCAGCTGAGGGCCTCCCGCGAGTGCTGCTaGTCCAGGGCTATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LPTGCHLPAVRPVKQLRASRECC*SRAMGS
Trigger: TGAGCCCATAGCCCTGGACAAGCAGCACTCGCGGGA...GGCCCTCAGCTGCTTGACAGGACGGACTGCTGGGAGATGGCAGCCGGTTGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS CCA 90 bp CATTCATCTCGGGGAAGGCAGGGTCGCCCTGCGTGCTGCTCGACGTaGATGGGTTCAGGGTGGAGGAGCCATTGCCGCTGCCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: HSSRGRQGRPACCST*MGSGWRSHCRCHSQ
Trigger: CTGAGAGTGGCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS TCA 90 bp AGACCCTGGGGTTCCTGGCCCGTAGAGAGGTGTCCAAGCTGCAGATaGTGTTCAGGCCTTGGGACAGGTGGCTCAAGCGGTGGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: RPWGSWPVERCPSCR*CSGLGTGGSSGGAR
Trigger: ACGGGCCCCACCGCTTGAGCCACCTGTCCCAAGGCCTGAACATCATCTGCAGCTTGGACACCTCTCTACGGGCCAGGAACCCCAGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS TCA 90 bp AGACCCTGGGGTTCCTGGCCCGTAGAGAGGTGTCCAAGCTGCAGATaGTGTTCAGGCCTTGGGACAGGTGGCTCAAGCGGTGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RPWGSWPVERCPSCR*CSGLGTGGSSGGAL
Trigger: CAGGGCCCCACCGCTTGAGCCACCTGTCCCAAGGCCTGAACATCATCTGCAGCTTGGACACCTCTCTACGGGCCAGGAACCCCAGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTCTGCGTGTCACCGTCTaGGTTTTGGCCGAGTCGCCG +
Preference number: 5 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGLRVTV*VLAESP
Trigger: CGGCGACTCGGCCAAAACCAAGACGGTGACACGCAG...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS GCA 90 bp CTCTTCTCCACCCTTGTGCACAATCTCCAACTGTTAGCGCGTAGCTaGCGCCGCCACCGCCACCACCGAGTCGCACCTGCCATCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LFSTLVHNLQLLARS*RRHRHHRVAPAIWN
Trigger: GTTCCAGATGGCAGGTGCGACTCGGTGGTGGCGGTGGCGGCGGCAGCTACGCGCTAACAGTTGGAGATTGTGCACAAGGGTGGAGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375678.7
ENST00000470428.1
CDS CCA 90 bp CGTAGCTGCCGCCGCCACCGCCACCACCGAGTCGCACCTGCCATCTaGAACAGGCCTCACATATTCCAAGACCTCCTTTCTGCTTCGCTG +
Preference number: 5 (lower is better)
Translates to: RSCRRHRHHRVAPAI*NRPHIFQDLLSASL
Trigger: CAGCGAAGCAGAAAGGAGGTCTTGGAATATGTGAGGCCTGTTCCAGATGGCAGGTGCGACTCGGTGGTGGCGGTGGCGGCGGCAGCTACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375678.7
ENST00000470428.1
CDS-3UTR CAA 90 bp CTGCTTGGAGATGGGCACCATGCGGTCCAGGTTCTCGTCCACAAAGAGACGCACGTCTTCACCCCGTATTaGACGCGGCTCCGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LLGDGHHAVQVLVHKETHVFTPY*TRLRSP
Trigger: CGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGAC...GTGCGTCTCTTTGTGGACGAGAACCTGGACCGCATGGTGCCCATCTCCAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS GCA 90 bp CCTGCGTGCTGCTCGACGTGGATGGGTTCAGGGTGGAGGAGCCATTaGCGCTGCCACTCTCAGAGGAGGAGTCATCGTCCTCTTGACTGT +
Preference number: 5 (lower is better)
Translates to: PACCSTWMGSGWRSH*RCHSQRRSHRPLDC
Trigger: ACAGTCAAGAGGACGATGACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 90 bp ACAAACAGCACCCGCCCTAGAAGACACCCATTAAAGAGCTCTGTCTaGTACTCTGGCGACCCGCCTCCCGGGGCACCGCAGCCTAGGACA +
Preference number: 5 (lower is better)
Translates to: TNSTRPRRHPLKSSV*YSGDPPPGAPQPRT
Trigger: TGTCCTAGGCTGCGGTGCCCCGGGAGGCGGGTCGCCAGAGTAGCAGACAGAGCTCTTTAATGGGTGTCTTCTAGGGCGGGTGCTGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGCGTGCTTGGGGGCTTaGCCTGGCTCCGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVACLGA*PGSAEL
Trigger: GAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACGC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGGGGCCACGGCGCCGTaGCCATTCATCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVGATAP*PFISGK
Trigger: CTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCCC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGTCTTCACCCCGTATTaGACGCGGCTCCGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTVFTPY*TRLRSP
Trigger: CGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGAC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS GCA 90 bp AGCGACCCGCTTCAGAGAGATGCCCTCTGGCTCCGACAGGCCATCTaGCCCCTCTTCTCCACCCTTGTGCACAATCTCCAACTGTTAGCG +
Preference number: 5 (lower is better)
Translates to: SDPLQRDALWLRQAI*PLFSTLVHNLQLLA
Trigger: CGCTAACAGTTGGAGATTGTGCACAAGGGTGGAGAAGAGGGGGCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470428.1
CDS CCA 90 bp AGGTCTCTGCGATCGCTCGGTAGGTTTTCTTCTGCCCAGCGTGCTTaGGGGCTTTGCCTGGCTCCGCTGAGCTCTCCACATGCATCGAGT +
Preference number: 5 (lower is better)
Translates to: RSLRSLGRFSSAQRA*GLCLAPLSSPHASS
Trigger: ACTCGATGCATGTGGAGAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAAAACCTACCGAGCGATCGCAGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000621426.6
CDS CCA 90 bp AAGCTGCAGATGATGTTCAGGCCTTGGGACAGGTGGCTCAAGCGGTaGGGCCCTGGAGACAGACACCACCGTCCTCTTGACTGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KLQMMFRPWDRWLKR*GPGDRHHRPLDCGG
Trigger: ACCTCCACAGTCAAGAGGACGGTGGTGTCTGTCTCCAGGGCCCCACCGCTTGAGCCACCTGTCCCAAGGCCTGAACATCATCTGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTACCCAGGCGGAAGCCCTaGGAGCGCACCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLPRRKP*ERTQNW
Trigger: CCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGG...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAGTGAGGTCCTCCTGCTaGGCGTTGCCTAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTVRSSC*ALPREV
Trigger: CACCTCCCTAGGCAACGCCAAGCAGGAGGACCTCAC...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTTGTGGGACAAGGGCTTaGGGAGCTCCTTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGCGTRA*GAPFGR
Trigger: TCTCCCAAAAGGAGCTCCCAAAGCCCTTGTCCCACA...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTTCTGCCCAGCGTGCTaGGGGGCTTTGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ELRYFTFFFPTEPLRRSVFCPAC*GALPGS
Trigger: GGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAA...CACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTCCAGAGCTGCCCCGTaGGCCTCTTCCAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLSRAAP*ASSKQV
Trigger: GACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTCCTCCTGCTTGGCGTaGCCTAGGGAGGTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVSSCLA*PREVPG
Trigger: ACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGGA...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGTGAGGGTGAGACAGCAGTGAGCTTAGTTCATCAGAACCAGCTCTTTGGTGCCCATGGCTACGGAGTGTaGCACGGAGAGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GEGETAVSLVHQNQLFGAHGYGV*HGEALG
Trigger: CCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCATG...GGCACCAAAGAGCTGGTTCTGATGAACTAAGCTCACTGCTGTCTCACCCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCTGCGTGTCACCGTCTaGGTTTTGGCCGAGTCGCCG +
Preference number: 5 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCLRVTV*VLAESP
Trigger: CGGCGACTCGGCCAAAACCAAGACGGTGACACGCAG...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTACCACTTGGCCCATCTaGGGTTCCCGGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSTTWPI*GSRPLP
Trigger: GGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGT...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGGCGTGCTTGGGGGCTTaGCCTGGCTCCGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQACLGA*PGSAEL
Trigger: GAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACGC...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAATACGTGCGGATGCGCTaGCGGGCCCGCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEYVRMR*RARSWN
Trigger: GTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGTA...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATCCAGAGCTGCCCCGTaGGCCTCTTCCAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLSRAAP*ASSKQV
Trigger: GACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTTCCTCCTGCTTGGCGTaGCCTAGGGAGGTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVSSCLA*PREVPG
Trigger: ACCAGGCACCTCCCTAGGCAACGCCAAGCAGGAGGA...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTCTCTTTTGTTTTGCTTaGCCATGGGTGTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGLFCFA*PWVWVR
Trigger: CCTCACCCACACCCATGGCAAAGCAAAACAAAAGAG...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACACTTGGGCACTGGAGGTaGTGCTGTGCTAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTLGHWR*CCAKGE
Trigger: CTCACCCTTAGCACAGCACAACCTCCAGTGCCCAAG...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS TCA 90 bp AGCAGCCTCCAAAGTGGGGCCACCAGACATGATGTCCTCGGCTCCTaGAGGGAGGCACTGCTCCTGGGAATTCATCACTCGAAGCTTCAT +
Preference number: 5 (lower is better)
Translates to: SSLQSGATRHDVLGS*REALLLGIHHSKLH
Trigger: ATGAAGCTTCGAGTGATGAATTCCCAGGAGCAGTGCCTCCCTTCAGGAGCCGAGGACATCATGTCTGGTGGCCCCACTTTGGAGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS GCA 90 bp CTTGAACTGTCCTCTGGTGAGCTAGGGCCACCTGGATTCCATGTGTaGTACACCCTAGGGGAAGAACGCCAGGATGTCTACGTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: LELSSGELGPPGFHV*YTLGEERQDVYVAF
Trigger: GAAGGCCACGTAGACATCCTGGCGTTCTTCCCCTAGGGTGTAGCACACATGGAATCCAGGTGGCCCTAGCTCACCAGAGGACAGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS CCA 90 bp TGGGCTCATCCTGTGAGGACTGGTAGATCTCTAGACGCATCCGCTTaGCTGCCTTTCTTGTCTCGCTCTCACAGGCAGCTGCCAGGATGT +
Preference number: 5 (lower is better)
Translates to: WAHPVRTGRSLDASA*LPFLSRSHRQLPGC
Trigger: ACATCCTGGCAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGAGATCTACCAGTCCTCACAGGATGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCACCCAGAACTGGAACTaGCCTTTCTCGCCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCTQNWN*PFSPAA
Trigger: CGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGT...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGGGGGCCACGGCGCCGTaGCCATTCATCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMGATAP*PFISGK
Trigger: CTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCCC...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGCAGGGGGCTGCAGGTaGCTGCTCAAGGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSAGGCR*LLKAPY
Trigger: GTACGGGGCCTTGAGCAGCAACCTGCAGCCCCCTGC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAAGAAGTGGCCCCTCTaGGCAGGAGTGAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMKKWPL*AGVSLR
Trigger: CCTCAGACTCACTCCTGCCAAGAGGGGCCACTTCTT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS CCA 90 bp CCTCCTTTCTGCTTCGCTGAACCTCCATCTTCTTTCAAATCACGCTaGGGACCAAAACGCACACCCCAGGCCACAGAGAAAGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PPFCFAEPPSSFKSR*GPKRTPQATEKGAW
Trigger: CCAGGCACCTTTCTCTGTGGCCTGGGGTGTGCGTTTTGGTCCCCAGCGTGATTTGAAAGAAGATGGAGGTTCAGCGAAGCAGAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCGCGATCCGCTGGTATTaGCTGCGTGTCACCGTCTTG +
Preference number: 5 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCAIRWY*LRVTVL
Trigger: CAAGACGGTGACACGCAGCAAATACCAGCGGATCGC...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTTCTGCCCAGCGTGCTaGGGGGCTTTGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSFCPAC*GALPGS
Trigger: GGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGGGAGGCTCGTTTTCTTaGGGTTCCAGGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVGGSFS*GSRPLE
Trigger: CTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTCC...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGGTGGGGCCCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLVGPVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGGGCCCCAC...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS-3UTR CAA 90 bp CTGAGACGCAGCGTGTATTGCACACCTGTCTGCACTAGCCTTTTCCAAGGCTCAGATGATGTTCAGGCCTaGGGACAGGTGGCTCAAGCG +
Preference number: 5 (lower is better)
Translates to: LRRSVYCTPVCTSLFQGSDDVQA*GQVAQA
Trigger: CGCTTGAGCCACCTGTCCCAAGGCCTGAACATCATC...TGAGCCTTGGAAAAGGCTAGTGCAGACAGGTGTGCAATACACGCTGCGTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTACGTGCGGATGCGCTaGCGGGCCCGCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDYVRMR*RARSWN
Trigger: GTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGTA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGGCAGGGGGCTGCAGGTaGCTGCTCAAGGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: NGILFPCRNLLLILPSLGAGGCR*LLKAPY
Trigger: GTACGGGGCCTTGAGCAGCAACCTGCAGCCCCCTGC...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAGTGAGGTCCTCCTGCTaGGCGTTGCCTAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEVRSSC*ALPREV
Trigger: CACCTCCCTAGGCAACGCCAAGCAGGAGGACCTCAC...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATCCCAGGCAGACACATaGTGTGGGGGAGTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLSQADT*CGGVGV
Trigger: AACCCCAACTCCCCCACACAATGTGTCTGCCTGGGA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGCATGGCTACGGAGTGTaGCACGGAGAGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMHGYGV*HGEALG
Trigger: CCCCAGGGCCTCTCCGTGCAACACTCCGTAGCCATG...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGATCAGAACCAGCTCTTaGGTGCCCTCCAAGTCGGGA +
Preference number: 5 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLIRTSS*VPSKSG
Trigger: TCCCGACTTGGAGGGCACCAAAGAGCTGGTTCTGAT...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTAAGGCCATCTGCCCCCTaGAACTGTCCTCTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AEIFHLLLSYGAAETQRVRPSAP*NCPLVS
Trigger: GCTCACCAGAGGACAGTTCAAGGGGGCAGATGGCCT...TACACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTCCCAGGCGGAAGCCCTaGGAGCGCACCCAGAACTGG +
Preference number: 5 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFPRRKP*ERTQNW
Trigger: CCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGG...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp TTCTCTGATGCTACCCTTCTTGTGGGATTAGCCTCCTGCAAAGACTCTGGAATTGCCCCCGAGCCCGTCTaGACCGGCACATACACCACT +
Preference number: 5 (lower is better)
Translates to: FSDATLLVGLASCKDSGIAPEPV*TGTYTT
Trigger: AGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGC...AATTCCAGAGTCTTTGCAGGAGGCTAATCCCACAAGAAGGGTAGCATCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTGCGTGCTTGGGGGCTTaGCCTGGCTCCGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFACLGA*PGSAEL
Trigger: GAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACGC...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp AGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGATGATGTTCAGGCCTaGGGACAGGTGGCTCAAGCG +
Preference number: 5 (lower is better)
Translates to: RAEIFHLLLSYGAAETQRDDVQA*GQVAQA
Trigger: CGCTTGAGCCACCTGTCCCAAGGCCTGAACATCATC...ACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000375677.5
ENST00000375678.7
CDS-3UTR CAA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTGTGGCCGGCGGGAGCTaGTCACACAGGTTGATGGGC +
Preference number: 5 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSVAGGS*SHRLMG
Trigger: GCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCAC...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACAGACGCACAAACATGTaGAAGGCCTTAAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADRRTNM*KALRRS
Trigger: TGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCT...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ATGTTTTCTGCCATGGCCGAGGTCAGATGGGGTGGCGTGGGTCTGGTCATCTCCAGACGCACAAACATGTaGAAGGCCTTAAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: MFSAMAEVRWGGVGLVISRRTNM*KALRRS
Trigger: TGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCT...GGAGATGACCAGACCCACGCCACCCCATCTGACCTCGGCCATGGCAGAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CAA 90 bp CTTCCAGAGCTGCCCCGTTGGCCTCTTCCAAGCAGGTCAGAGCACCCGTGTGGTACACGAATTCAAATGTaGAGTAGTACTGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LPELPRWPLPSRSEHPCGTRIQM*SSTEQV
Trigger: CACCTGCTCAGTACTACTCAACATTTGAATTCGTGT...ACCACACGGGTGCTCTGACCTGCTTGGAAGAGGCCAACGGGGCAGCTCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGAGTTGTAAGTGGCCCTaGGGAATAGGGATGGATGGG +
Preference number: 5 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMSCKWP*GIGMDG
Trigger: CCCATCCATCCCTATTCCCAAGGGCCACTTACAACT...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTCGGCACATACACCACTaGGCCCATCTTGGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSRHIHH*AHLGFP
Trigger: CGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCG...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTTTCTGCCCAGCGTGCTaGGGGGCTTTGCCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFFCPAC*GALPGS
Trigger: GGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAA...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp CCTGGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCGGAGGCTCGTTTTCTTaGGGTTCCAGGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: PGFSAILYETKPGGCASGGGSFS*GSRPLE
Trigger: CTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTCC...GCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CAA 90 bp CTCAGGGTCCATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGGAGTCATCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: LRVHAFRVVHLVIVLMVIGVIVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGATGACTCC...GATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATGGACCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CAA 90 bp ACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGTGGGGGAGTTCATTGTGTGGGGGAGTaGGGGTTACAGCTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: TPSLDLLTSQADTLCGGVHCVGE*GLQLFR
Trigger: TCTGAACAGCTGTAACCCCAACTCCCCCACACAATG...AACTCCCCCACACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AAGTGGCCCTTGGGAATAGGGATGGATGGGTTCCACCTGTTTGAAATCCTCGAAAAGAAGTGGCCCCTCTaGGCAGGAGTGAGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: KWPLGIGMDGFHLFEILEKKWPL*AGVSLR
Trigger: CCTCAGACTCACTCCTGCCAAGAGGGGCCACTTCTT...TTCGAGGATTTCAAACAGGTGGAACCCATCCATCCCTATTCCCAAGGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTCTTGGGCACTGGAGGTaGTGCTGTGCTAAGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSLGHWR*CCAKGE
Trigger: CTCACCCTTAGCACAGCACAACCTCCAGTGCCCAAG...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACGGTGTGGGAGAGGCCTaGGGCACTGGAGGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDGVGEA*GTGGCA
Trigger: AGCACAACCTCCAGTGCCCAAGGCCTCTCCCACACC...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CTGGGTTCCAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACTTTCCATGCAGAAACTaGCTCCTGATTCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: LGSSSWTPSLDLLTSQADFPCRN*LLILPS
Trigger: AGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAA...GTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTGGAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAAGTTGTAAGTGGCCCTaGGGAATAGGGATGGATGGG +
Preference number: 5 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLSCKWP*GIGMDG
Trigger: CCCATCCATCCCTATTCCCAAGGGCCACTTACAACT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGGACACCACCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLDTTVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGGTGGTGTC...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS TCA 90 bp TTTTCTTTGGGTTCCAGGCCATTGGAGTTAAAGTGCATCCTCTTCTaGCACTCCGTACAGCTCATCAGGAACCGGGTCACGGCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: FSLGSRPLELKCILF*HSVQLIRNRVTASL
Trigger: GAGAGAGGCCGTGACCCGGTTCCTGATGAGCTGTACGGAGTGTCAGAAGAGGATGCACTTTAACTCCAATGGCCTGGAACCCAAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000621426.6
CDS CCA 90 bp TCCAAACGCGGGAACTGTCCATCCTCACTCTGCAATGGGGCGATCTaGCAGACACTTCCCAATCAAGTCATCAAATTCAGCAGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: SKRGNCPSSLCNGAI*QTLPNQVIKFSSLQ
Trigger: TTGGAGGCTGCTGAATTTGATGACTTGATTGGGAAGTGTCTGCCAGATCGCCCCATTGCAGAGTGAGGATGGACAGTTCCCGCGTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp TCCTTGGTGATGTGGGGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCTTGGGTTCCAGGCCATaGGAGTTAAAGTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: SLVMWGRWEALFIHTCWCLGSRP*ELKCIL
Trigger: GAGGATGCACTTTAACTCCAATGGCCTGGAACCCAA...GCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCCCCACATCACCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCATGCGACGGCAGGACTaGAGGTACGTGCGGATGCGC +
Preference number: 5 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFMRRQD*RYVRMR
Trigger: GCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCAT...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AAGAGACGCACAAACATGTTGAAGGCCTTAAGACGCTCAGGGTCCATGCCTTCATCTAGACGCATCCGCTaGGCTGCCTTTCTTGTCTCG +
Preference number: 5 (lower is better)
Translates to: KRRTNMLKALRRSGSMPSSRRIR*AAFLVS
Trigger: CGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGA...TGAAGGCATGGACCCTGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CAA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTCTAGACGCATCCGCTaGGCTGCCTTTCTTGTCTCG +
Preference number: 5 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSSRRIR*AAFLVS
Trigger: CGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGGTATTGGAGGCCACTaGAGAGATAACGACCACCCC +
Preference number: 5 (lower is better)
Translates to: PGLAALVGIALSKRKCLSGIGGH*RDNDHP
Trigger: GGGGTGGTCGTTATCTCTCAAGTGGCCTCCAATACC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTCGGTTCATGTCTAGCTaGGGTACTGCCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: WNPVSMQKLAPDSAISRARFMSS*GTASGR
Trigger: CCTCCCAGAGGCAGTACCCAAGCTAGACATGAACCG...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTTGTGGGACAAGGGCTTaGGGAGCTCCTTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSCGTRA*GAPFGR
Trigger: TCTCCCAAAAGGAGCTCCCAAAGCCCTTGTCCCACA...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACACCACTTGGCCCATCTaGGGTTCCCGGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNTTWPI*GSRPLP
Trigger: GGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGT...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTCGGCACATACACCACTaGGCCCATCTTGGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFRHIHH*AHLGFP
Trigger: CGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCG...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp GCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGCGTGTATTGGGTTCCAGGCCATaGGAGTTAAAGTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: AEIFHLLLSYGAAETQRVLGSRP*ELKCIL
Trigger: GAGGATGCACTTTAACTCCAATGGCCTGGAACCCAA...TACACGCTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp ATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGGTGGGGCCCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: IDTVLSELRYFTFFFPTEVGPVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGGGCCCCAC...CTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326071.8
ENST00000375677.5
CDS-3UTR CAA 90 bp GGTTACAGCTGTTCAGAACAGGCTCAGGGCACATCCTGGAAAAAGCCCACGCTGTCAGAGTCGTTCATCTaGTCATTGTCCTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: GYSCSEQAQGTSWKKPTLSESFI*SLSSWS
Trigger: TGACCATGAGGACAATGACAAGATGAACGACTCTGA...CAGCGTGGGCTTTTTCCAGGATGTGCCCTGAGCCTGTTCTGAACAGCTGTAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTTCTAGACGCATCCGCTaGGCTGCCTTTCTTGTCTCG +
Preference number: 5 (lower is better)
Translates to: WNPVSMQKLAPDSAISRASRRIR*AAFLVS
Trigger: CGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGA...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTCCCGCGAGTGCTGCTaGTCCAGGGCTATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKSRECC*SRAMGS
Trigger: TGAGCCCATAGCCCTGGACAAGCAGCACTCGCGGGA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGCAGGGGGCTGCAGGTaGCTGCTCAAGGCCCCGTAC +
Preference number: 5 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPAGGCR*LLKAPY
Trigger: GTACGGGGCCTTGAGCAGCAACCTGCAGCCCCCTGC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGGTGCCTCTTTTGTTTaGCTTTGCCATGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: PGLAALVGIALSKRKCLSGASFV*LCHGCG
Trigger: CCCACACCCATGGCAAAGCAAAACAAAAGAGGCACC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACTCCCAGGCAGACACATaGTGTGGGGGAGTTGGGGTT +
Preference number: 5 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDSQADT*CGGVGV
Trigger: AACCCCAACTCCCCCACACAATGTGTCTGCCTGGGA...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGGTATTGGAGGCCACTaGAGAGATAACGACCACCCC +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSGIGGH*RDNDHP
Trigger: GGGGTGGTCGTTATCTCTCAAGTGGCCTCCAATACC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGACCGGTTCATGTCTAGCTaGGGTACTGCCTCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSLNPGWLDPEGNMSHSDRFMSS*GTASGR
Trigger: CCTCCCAGAGGCAGTACCCAAGCTAGACATGAACCG...GTCAGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTATCAGAACCAGCTCTTaGGTGCCCTCCAAGTCGGGA +
Preference number: 5 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAIRTSS*VPSKSG
Trigger: TCCCGACTTGGAGGGCACCAAAGAGCTGGTTCTGAT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCTACGCTCTTGCCGCAGTACTAAGGCAGGCTGGAGGGTGGTCAGTTCCAACAAAGAGCCACGTTAAGTaGCATAGGTGCATATCTGTA +
Preference number: 5 (lower is better)
Translates to: TYALAAVLRQAGGWSVPTKSHVK*HRCISV
Trigger: TACAGATATGCACCTATGCAACTTAACGTGGCTCTT...TGTTGGAACTGACCACCCTCCAGCCTGCCTTAGTACTGCGGCAAGAGCGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS TCA 90 bp TCTGGAACAGGCCTCACATATTCCAAGACCTCCTTTCTGCTTCGCTaGACCTCCATCTTCTTTCAAATCACGCTGGGGACCAAAACGCAC +
Preference number: 5 (lower is better)
Translates to: SGTGLTYSKTSFLLR*TSIFFQITLGTKTH
Trigger: GTGCGTTTTGGTCCCCAGCGTGATTTGAAAGAAGATGGAGGTTCAGCGAAGCAGAAAGGAGGTCTTGGAATATGTGAGGCCTGTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS TCA 90 bp GGTCATCACACGAATGGCTCACGTTCTAGACATTATTGCCGGGAGTaGAAATTGGTTCCCTGTCTGTGGAGGGCAGTCTGTATCATCTCC +
Preference number: 5 (lower is better)
Translates to: GHHTNGSRSRHYCRE*KLVPCLWRAVCIIS
Trigger: GGAGATGATACAGACTGCCCTCCACAGACAGGGAACCAATTTTCACTCCCGGCAATAATGTCTAGAACGTGAGCCATTCGTGTGATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS-3UTR CAA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACGCCCCCGAGCCCGTCTaGACCGGCACATACACCACT +
Preference number: 5 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNAPEPV*TGTYTT
Trigger: AGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGC...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCGGAGTCATCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFGVIVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGATGACTCC...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGGGCCACGGCGCCGTaGCCATTCATCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGATAP*PFISGK
Trigger: CTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAGTGGCCGGCGGGAGCTaGTCACACAGGTTGATGGGC +
Preference number: 5 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSVAGGS*SHRLMG
Trigger: GCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCAC...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGTCTTCACCCCGTATTaGACGCGGCTCCGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPVFTPY*TRLRSP
Trigger: CGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGAC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTATCAGAGTCGTTCATCTaGTCATTGTCCTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLSESFI*SLSSWS
Trigger: TGACCATGAGGACAATGACAAGATGAACGACTCTGA...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGTACGTGCGGATGCGCTaGCGGGCCCGCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKYVRMR*RARSWN
Trigger: GTTCCAGGAGCGGGCCCGCAAGCGCATCCGCACGTA...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCATGCGACGGCAGGACTaGAGGTACGTGCGGATGCGC +
Preference number: 5 (lower is better)
Translates to: EEERVHFAFLNKYAILLTMRRQD*RYVRMR
Trigger: GCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCAT...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACTCTTTTGTTTTGCTTaGCCATGGGTGTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: PGLAALVGIALSKRKCLSLFCFA*PWVWVR
Trigger: CCTCACCCACACCCATGGCAAAGCAAAACAAAAGAG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTGGTGCCTCTTTTGTTTaGCTTTGCCATGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSGASFV*LCHGCG
Trigger: CCCACACCCATGGCAAAGCAAAACAAAAGAGGCACC...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GTGGCTCCTCCACTTCCACTGATCCCTTTACTCCAAACATGGCGCAAGGGGATGGTCAGTTCCAACAGCTaGAACTCAGAAAAACATGAC +
Preference number: 5 (lower is better)
Translates to: VAPPLPLIPLLQTWRKGMVSSNS*NSEKHD
Trigger: GTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGAC...CATCCCCTTGCGCCATGTTTGGAGTAAAGGGATCAGTGGAAGTGGAGGAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTCCCAAATGATCACTTaGTGCCCTGAGGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSSQMIT*CPEALQ
Trigger: CTGAAGGGCCTCAGGGCACAAAGTGATCATTTGGGA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGTCCCAAATGATCACTTaGTGCCCTGAGGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMSQMIT*CPEALQ
Trigger: CTGAAGGGCCTCAGGGCACAAAGTGATCATTTGGGA...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCACCGTCAGCACTGTCCTaGGGAATAAACTGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PGLAALVGIALSKRKCLSPSALS*GINCPL
Trigger: CAAAGGACAGTTTATTCCCAAGGACAGTGCTGACGG...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS GCA 90 bp TTCAGGGTCATTACGAGGGGATGCACAGTGCCAGCATACACTGAATaGTCAATATACAGTAACCTCGGTCATCACACGAATGGCTCACGT +
Preference number: 5 (lower is better)
Translates to: FRVITRGCTVPAYTE*SIYSNLGHHTNGSR
Trigger: ACGTGAGCCATTCGTGTGATGACCGAGGTTACTGTATATTGAGCATTCAGTGTATGCTGGCACTGTGCATCCCCTCGTAATGACCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS CCA 90 bp GAAATGTGTTTCCAAACGCGGGAACTGTCCATCCTCACTCTGCAATaGGGCGATCTGGCAGACACTTCCCAATCAAGTCATCAAATTCAG +
Preference number: 5 (lower is better)
Translates to: EMCFQTRELSILTLQ*GDLADTSQSSHQIQ
Trigger: CTGAATTTGATGACTTGATTGGGAAGTGTCTGCCAGATCGCCCCATTGCAGAGTGAGGATGGACAGTTCCCGCGTTTGGAAACACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGGCGATCCGCTGGTATTaGCTGCGTGTCACCGTCTTG +
Preference number: 5 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKAIRWY*LRVTVL
Trigger: CAAGACGGTGACACGCAGCAAATACCAGCGGATCGC...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp GGTGACCTGGATTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTTTGGGTTCCAGGCCATaGGAGTTAAAGTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: GDLDLVPFCMKQNQGAVLLGSRP*ELKCIL
Trigger: GAGGATGCACTTTAACTCCAATGGCCTGGAACCCAA...AAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAATCCAGGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CAA 90 bp ACACGAATTCAAATGTTGAGTAGTACTGAGCAGGTGGGGCCAGATGTGTGGATGTTGGGTTCCAGGCCATaGGAGTTAAAGTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: TRIQMLSSTEQVGPDVWMLGSRP*ELKCIL
Trigger: GAGGATGCACTTTAACTCCAATGGCCTGGAACCCAA...CATCCACACATCTGGCCCCACCTGCTCAGTACTACTCAACATTTGAATTCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621426.6
CDS-3UTR CAA 90 bp GGCAGGTGGGAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTTGGATCTTCTCATCCTaGGTGATGTGGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GRWEALFIHTCWCPIMIFWIFSS*VMWGRW
Trigger: CCACCTGCCCCACATCACCAAGGATGAGAAGATCCA...AAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTCCCACCTGCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGTGGCCGGCGGGAGCTaGTCACACAGGTTGATGGGC +
Preference number: 5 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKVAGGS*SHRLMG
Trigger: GCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCAC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAACATATTCTTTCCTTTCTAGACGCACAAACATGTaGAAGGCCTTAAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: PGGAWEAQWTLTTYSFLSRRTNM*KALRRS
Trigger: TGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCT...AGAAAGGAAAGAATATGTTGTTAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTATGCGACGGCAGGACTaGAGGTACGTGCGGATGCGC +
Preference number: 5 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPMRRQD*RYVRMR
Trigger: GCGCATCCGCACGTACCTCAAGTCCTGCCGTCGCAT...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTTCCCGCGAGTGCTGCTaGTCCAGGGCTATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPSRECC*SRAMGS
Trigger: TGAGCCCATAGCCCTGGACAAGCAGCACTCGCGGGA...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTCATTGTGTGGGGGAGTaGGGGTTACAGCTGTTCAGA +
Preference number: 5 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSHCVGE*GLQLFR
Trigger: TCTGAACAGCTGTAACCCCAACTCCCCCACACAATG...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGGTGTGGGAGAGGCCTaGGGCACTGGAGGTTGTGCT +
Preference number: 5 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPGVGEA*GTGGCA
Trigger: AGCACAACCTCCAGTGCCCAAGGCCTCTCCCACACC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAATTCTAGGGTGGCGATaGTCTCTGCCAGGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: PGLAALVGIALSKRKCLSILGWR*SLPGFN
Trigger: GTTAAAACCTGGCAGAGACAATCGCCACCCTAGAAT...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CGACATGATGAAATCCATTGTCCTGGAGGGGCCTGGGAGGCCCAATGGACTTTAACAGGCGAAAAAGGATaGAGCTGTTTAGCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: RHDEIHCPGGAWEAQWTLTGEKG*SCLAQK
Trigger: TTTCTGAGCTAAACAGCTCAATCCTTTTTCGCCTGT...TAAAGTCCATTGGGCCTCCCAGGCCCCTCCAGGACAATGGATTTCATCATGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CAGCTCCTGGACACCCAGTCTGGACTTACTTACCTCCCAGGCAGACACATTGTGAAAAGTGAGAGGTTTTaGTTTGTGGCTTTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: QLLDTQSGLTYLPGRHIVKSERF*FVALLS
Trigger: GCTTAGCAAAGCCACAAACAAAAACCTCTCACTTTT...CACAATGTGTCTGCCTGGGAGGTAAGTAAGTCCAGACTGGGTGTCCAGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGAGACGCAGAACTCTTCTCCACCCTaGTGCACAATCTCCAACTGT +
Preference number: 5 (lower is better)
Translates to: IRAEIFHLLLSYGAAETQNSSPP*CTISNC
Trigger: ACAGTTGGAGATTGTGCACAAGGGTGGAGAAGAGTT...CTGCGTCTCAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp TTTAGTGCCATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGTGTGCTTCCGGCTGTTaGTGCGGTTTTGTGCTTCAT +
Preference number: 5 (lower is better)
Translates to: FSAILYETKPGGCASGCLCASGC*CGFVLH
Trigger: ATGAAGCACAAAACCGCACAAACAGCCGGAAGCACA...CAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAATGGCACTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS CCA 90 bp ACACGAATGGCTCACGTTCTAGACATTATTGCCGGGAGTGAAAATTaGTTCCCTGTCTGTGGAGGGCAGTCTGTATCATCTCCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TRMAHVLDIIAGSEN*FPVCGGQSVSSPKA
Trigger: TGCTTTTGGAGATGATACAGACTGCCCTCCACAGACAGGGAACCAATTTTCACTCCCGGCAATAATGTCTAGAACGTGAGCCATTCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS-3UTR CAA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCGGAGTCATCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: EEERVHFAFLNKYAILLTGVIVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGATGACTCC...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTATTCTAGGGTGGCGATaGTCTCTGCCAGGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAILGWR*SLPGFN
Trigger: GTTAAAACCTGGCAGAGACAATCGCCACCCTAGAAT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp CCTGGTTTAGCAGCACTGGTAGGTATTGCACTGAGCAAGAGGAAGTGCCTATCAGCAAAGACTCTGGAATaGGAGTATCCTACTCTTGCA +
Preference number: 5 (lower is better)
Translates to: PGLAALVGIALSKRKCLSAKTLE*EYPTLA
Trigger: TGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGC...TGATAGGCACTTCCTCTTGCTCAGTGCAATACCTACCAGTGCTGCTAAACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTATGGGTTCCACCTGTTaGAAATCCTCGAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSMGSTC*KSSKTL
Trigger: GAGGGTTTTCGAGGATTTCAAACAGGTGGAACCCAT...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTACAACGGCGCTACATTaGAGGATGTCATCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAATTALH*RMSSPP
Trigger: TGGAGGAGATGACATCCTCAAATGTAGCGCCGTTGT...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp ATTCTGTATGAAACAAAACCAGGGGGCTGTGCTTCCGGCTGTTTGTGCGGTTTTGCTGTTTGTGCGGTTTaGTGCTTCATTCTTCATGGG +
Preference number: 5 (lower is better)
Translates to: ILYETKPGGCASGCLCGFAVCAV*CFILHG
Trigger: CCCATGAAGAATGAAGCACAAAACCGCACAAACAGC...AAAACCGCACAAACAGCCGGAAGCACAGCCCCCTGGTTTTGTTTCATACAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419612.1
CDS-3UTR CAA 90 bp ATTGATACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGGGAGGCTCGTTTTCTTaGGGTTCCAGGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: IDTVLSELRYFTFFFPTEGGSFS*GSRPLE
Trigger: CTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTCC...CTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp CATGCCTTCAGAGTCGTTCATCTTGTCATTGTCCTCATGGTCATCGTGGTCATCTCAGAGTCGTTCATCTaGTCATTGTCCTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: HAFRVVHLVIVLMVIVVISESFI*SLSSWS
Trigger: TGACCATGAGGACAATGACAAGATGAACGACTCTGA...GATGACCACGATGACCATGAGGACAATGACAAGATGAACGACTCTGAAGGCATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS-3UTR CAA 90 bp GGGTTGTCCCTAAATCCTGGATGGCTTGATCCTGAAGGCAACATGAGTCATTCTTTTCCATGCAGAAACTaGCTCCTGATTCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: GLSLNPGWLDPEGNMSHSFPCRN*LLILPS
Trigger: AGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAA...AGAATGACTCATGTTGCCTTCAGGATCAAGCCATCCAGGATTTAGGGACAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGGCTTTATTTATCCACACATGCTGGTGCCCAATAATGATTTTTAGAACGAACGGAGGCTCGTTTTCTTaGGGTTCCAGGCCATTGGAG +
Preference number: 5 (lower is better)
Translates to: EALFIHTCWCPIMIFRTNGGSFS*GSRPLE
Trigger: CTCCAATGGCCTGGAACCCAAAGAAAACGAGCCTCC...GTTCGTTCTAAAAATCATTATTGGGCACCAGCATGTGTGGATAAATAAAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS-3UTR CAA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGGAGTCATCGTCCTCTaGACTGTGGAGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKGVIVL*TVEVLR
Trigger: CCGCAGAACCTCCACAGTCAAGAGGACGATGACTCC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCATCTAGACGCATCCGCTaGGCTGCCTTTCTTGTCTCG +
Preference number: 5 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSSRRIR*AAFLVS
Trigger: CGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGA...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp ATGGACCACATAATTGAGGCATATGGGCCATCTACCAGGTGGAAAGTGTTTTTCTCTCTTGAAAACACATaGAACCTACGCTCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: MDHIIEAYGPSTRWKVFFSLENT*NLRSCR
Trigger: GCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGA...GAAAAACACTTTCCACCTGGTAGATGGCCCATATGCCTCAATTATGTGGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AACACACAGGGACTGGGGGCATCTGTACATGTAAACAGTACACTTTCACTGAGTACACGAATTCAAATGTaGAGTAGTACTGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: NTQGLGASVHVNSTLSLSTRIQM*SSTEQV
Trigger: CACCTGCTCAGTACTACTCAACATTTGAATTCGTGT...ACTCAGTGAAAGTGTACTGTTTACATGTACAGATGCCCCCAGTCCCTGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TCTTTCCTTTCTCTTGAAAACACATTGAACCTACGCTCTTGCCGCAGTACTAAGTCTCTTGAAAACACATaGAACCTACGCTCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: SFLSLENTLNLRSCRSTKSLENT*NLRSCR
Trigger: GCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGA...CTTAGTACTGCGGCAAGAGCGTAGGTTCAATGTGTTTTCAAGAGAAAGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AATGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGACAGGCGAAAAAGGATaGAGCTGTTTAGCTCAGAAA +
Preference number: 5 (lower is better)
Translates to: NGILFPCRNLLLILPSLGTGEKG*SCLAQK
Trigger: TTTCTGAGCTAAACAGCTCAATCCTTTTTCGCCTGT...CCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp TGGAATCCTGTTTCCATGCAGAAACTTGCTCCTGATTCTGCCATCTCTAGGGCTATACAAAGGTTCACATaGGTCTTAGGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: WNPVSMQKLAPDSAISRAIQRFT*VLGRYR
Trigger: CCTGTATCTACCTAAGACCAATGTGAACCTTTGTAT...AGCCCTAGAGATGGCAGAATCAGGAGCAAGTTTCTGCATGGAAACAGGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp ACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGTCTTTCTTTTGGGTTTaGTTAACTCTGGGATGTCTG +
Preference number: 5 (lower is better)
Translates to: TVLSELRYFTFFFPTEPLSFFWV*LTLGCL
Trigger: CAGACATCCCAGAGTTAACAAAACCCAAAAGAAAGA...CAGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCAGACGCACAAACATGTaGAAGGCCTTAAGACGCTCA +
Preference number: 5 (lower is better)
Translates to: EEERVHFAFLNKYAILLTRRTNM*KALRRS
Trigger: TGAGCGTCTTAAGGCCTTCAACATGTTTGTGCGTCT...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp TACCGTGTTATCAGAGCTGAGATATTTCACCTTCTTCTTTCCTACGGAGCCGCTGATGCAAGACAGATTTaGAGAACTGCTGATCAGAAT +
Preference number: 5 (lower is better)
Translates to: YRVIRAEIFHLLLSYGAADARQI*RTADQN
Trigger: ATTCTGATCAGCAGTTCTCAAAATCTGTCTTGCATC...AGCGGCTCCGTAGGAAAGAAGAAGGTGAAATATCTCAGCTCTGATAACACGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS-3UTR CAA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTCAGAGTCGTTCATCTaGTCATTGTCCTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: EEERVHFAFLNKYAILLTSESFI*SLSSWS
Trigger: TGACCATGAGGACAATGACAAGATGAACGACTCTGA...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAATGGGTTCCACCTGTTaGAAATCCTCGAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSMGSTC*KSSKTL
Trigger: GAGGGTTTTCGAGGATTTCAAACAGGTGGAACCCAT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTGTCAGTTCCAACAGCTaGAACTCAGAAAAACATGAC +
Preference number: 5 (lower is better)
Translates to: RKKGSTLLFSINMQFCSPVSSNS*NSEKHD
Trigger: GTCATGTTTTTCTGAGTTCAAGCTGTTGGAACTGAC...AGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp AAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCTAAGGCAAAGACTCTGGAATaGGAGTATCCTACTCTTGCA +
Preference number: 5 (lower is better)
Translates to: KKGSTLLFSINMQFCSPKAKTLE*EYPTLA
Trigger: TGCAAGAGTAGGATACTCCAATTCCAGAGTCTTTGC...CTTAGGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCACCAAAAGTGAGAGGTTTTaGTTTGTGGCTTTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: EEERVHFAFLNKYAILLTKSERF*FVALLS
Trigger: GCTTAGCAAAGCCACAAACAAAAACCTCTCACTTTT...GGTGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAAAGAGCCACGTTAAGTaGCATAGGTGCATATCTGTA +
Preference number: 5 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSKSHVK*HRCISV
Trigger: TACAGATATGCACCTATGCAACTTAACGTGGCTCTT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS-3UTR CAA 90 bp GAGAGGAAGAAAGGGTCCACTTTGCTTTTCTCAATAAATATGCAATTCTGCTCAATACAAAGGTTCACATaGGTCTTAGGTAGATACAGG +
Preference number: 5 (lower is better)
Translates to: ERKKGSTLLFSINMQFCSIQRFT*VLGRYR
Trigger: CCTGTATCTACCTAAGACCAATGTGAACCTTTGTAT...TGAGCAGAATTGCATATTTATTGAGAAAAGCAAAGTGGACCCTTTCTTCCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS CAA 90 bp CCGCTGCCCAGGCGGAAGCCCTTGGAGCGCACCCAGAACTGGAACTaGCCTTTCTCGCCGGCTGCGGGGCCGCTGCCCGCGCCAGTCCCG +
Preference number: 6 (lower is better)
Translates to: PLPRRKPLERTQNWN*PFSPAAGPLPAPVP
Trigger: CGGGACTGGCGCGGGCAGCGGCCCCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS TCA 72 bp AGCTGCCGCACGGCGCTGATCTCCGTGGGGCTGAGCTaGGCGGTGGGCACGGGCCTGCTGGTGCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SCRTALISVGLS*AVGTGLLVLVL
Trigger: CAGCACCAGCACCAGCAGGCCCGTGCCCACCGCTCAGCTCAGCCCCACGGAGATCAGCGCCGTGCGGCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS GCA 72 bp GGCGGAAGCCCTTGGAGCGCACCCAGAACTGGAACTTaGCTTTCTCGCCGGCTGCGGGGCCGCTGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: GGSPWSAPRTGT*LSRRLRGRCPR
Trigger: GCGCGGGCAGCGGCCCCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS CCA 72 bp GCCCCCGAGCCCGTCTTGACCGGCACATACACCACTTaGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: APEPVLTGTYTT*PILGSRPLPRR
Trigger: CCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000201961.6
ENST00000621426.6
CDS CCA 72 bp TACTGTCCAGCATCCCCGGACGGACAGGCCAGGGTCTaGGCCTGGCTGCAGGACTCTGGCCTGGCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: YCPASPDGQARV*AWLQDSGLAGA
Trigger: TGCCCCCGCCAGGCCAGAGTCCTGCAGCCAGGCCCAGACCCTGGCCTGTCCGTCCGGGGATGCTGGACAGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS CAA 72 bp AGGCGGAAGCCCTTGGAGCGCACCCAGAACTGGAACTaGCCTTTCTCGCCGGCTGCGGGGCCGCTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: RRKPLERTQNWN*PFSPAAGPLPA
Trigger: CGCGGGCAGCGGCCCCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS CAA 72 bp GCGGCCGTGGTGAAGTCCATGGGGGCCACGGCGCCGTaGCCATTCATCTCGGGGAAGGCAGGGTCGCCCTGC +
Preference number: 6 (lower is better)
Translates to: AAVVKSMGATAP*PFISGKAGSPC
Trigger: GCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCAACGGCGCCGTGGCCCCCATGGACTTCACCACGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CAA 90 bp GCCCCCGAGCCCGTCTTGACCGGCACATACACCACTTGGCCCATCTaGGGTTCCCGGCCGCTGCCCAGGCGGAAGCCCTTGGAGCGCACC +
Preference number: 6 (lower is better)
Translates to: APEPVLTGTYTTWPI*GSRPLPRRKPLERT
Trigger: GGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000201961.6
ENST00000621426.6
CDS CAA 90 bp GCAGAGGCCAACACCAGGACCTCGGGGGTGGTCTTCACCCCGTATTaGACGCGGCTCCGCAGCCCGTCGGCACCGCAGCCATCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: AEANTRTSGVVFTPY*TRLRSPSAPQPSEG
Trigger: CCCCTCGGATGGCTGCGGTGCCGACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGACCACCCCCGAGGTCCTGGTGTTGGCCTCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS GCA 72 bp CGTCGGCACCGCAGCCATCCGAGGGGTAGGAGGCTGTaGCAAGTGCCGTGGCCGGCGGGAGCTTGTCACACA +
Preference number: 6 (lower is better)
Translates to: RRHRSHPRGRRL*QVPWPAGACHT
Trigger: TGTGTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCTCGGATGGCTGCGGTGCCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CCA 72 bp CTGCCCAGGCGGAAGCCCTTGGAGCGCACCCAGAACTaGAACTTGCCTTTCTCGCCGGCTGCGGGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: LPRRKPLERTQN*NLPFSPAAGPL
Trigger: CAGCGGCCCCGCAGCCGGCGAGAAAGGCAAGTTCCAGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS CCA 72 bp CGGGGAAGGCAGGGTCGCCCTGCGTGCTGCTCGACGTaGATGGGTTCAGGGTGGAGGAGCCATTGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: RGRQGRPACCST*MGSGWRSHCRC
Trigger: GCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CAA 72 bp TGCCCCCGAGCCCGTCTTGACCGGCACATACACCACTaGGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: CPRARLDRHIHH*AHLGFPAAAQA
Trigger: CGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000201961.6
ENST00000621426.6
CDS CAA 90 bp CAGGCCATCTGCCCCCGAGCCCGTCTTGACCGGCACATACACCACTaGGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCGGAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: QAICPRARLDRHIHH*AHLGFPAAAQAEAL
Trigger: AAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGGGGGCAGATGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000201961.6
ENST00000621426.6
CDS CAA 90 bp CACAGCGAGCCCGTCTTGACCGGCACATACACCACTTGGCCCATCTaGGGTTCCCGGCCGCTGCCCAGGCGGAAGCCCTTGGAGCGCACC +
Preference number: 6 (lower is better)
Translates to: HSEPVLTGTYTTWPI*GSRPLPRRKPLERT
Trigger: GGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS TCA 72 bp GTGGCCGGCGGGAGCTTGTCACACAGGTTGATGGGCTaGTCCTCGGCGGCCGTGGTGAAGTCCATGGGGGCC +
Preference number: 6 (lower is better)
Translates to: VAGGSLSHRLMG*SSAAVVKSMGA
Trigger: GGCCCCCATGGACTTCACCACGGCCGCCGAGGATCAGCCCATCAACCTGTGTGACAAGCTCCCGCCGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS TCA 72 bp ACACCAGGACCTCGGGGGTGGTCTTCACCCCGTATTTaGCGCGGCTCCGCAGCCCGTCGGCACCGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: TPGPRGWSSPRI*RGSAARRHRSH
Trigger: ATGGCTGCGGTGCCGACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGACCACCCCCGAGGTCCTGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS CCA 72 bp CACAGCGAGCCCGTCTTGACCGGCACATACACCACTTaGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: HSEPVLTGTYTT*PILGSRPLPRR
Trigger: CCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGCTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS CAA 72 bp AACACCAGGACCTCGGGGGTGGTCTTCACCCCGTATTaGACGCGGCTCCGCAGCCCGTCGGCACCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: NTRTSGVVFTPY*TRLRSPSAPQP
Trigger: TGGCTGCGGTGCCGACGGGCTGCGGAGCCGCGTCAAATACGGGGTGAAGACCACCCCCGAGGTCCTGGTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475781.1
CDS CCA 72 bp GAAGGCAGGGTCGCCCTGCGTGCTGCTCGACGTGGATaGGTTCAGGGTGGAGGAGCCATTGCCGCTGCCACT +
Preference number: 6 (lower is better)
Translates to: EGRVALRAARRG*VQGGGAIAAAT
Trigger: AGTGGCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CAA 72 bp ACACAGCGAGCCCGTCTTGACCGGCACATACACCACTaGGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: TQRARLDRHIHH*AHLGFPAAAQA
Trigger: CGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGCTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS GCA 72 bp CATACACCACTTGGCCCATCTTGGGTTCCCGGCCGCTaGCCAGGCGGAAGCCCTTGGAGCGCACCCAGAACT +
Preference number: 6 (lower is better)
Translates to: HTPLGPSWVPGR*PGGSPWSAPRT
Trigger: AGTTCTGGGTGCGCTCCAAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000485364.1
ENST00000621426.6
CDS GCA 72 bp TGCCATTCATCTCGGGGAAGGCAGGGTCGCCCTGCGTaGTGCTCGACGTGGATGGGTTCAGGGTGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: CHSSRGRQGRPA*CSTWMGSGWRS
Trigger: GCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp CCGTTGCCATTCATCTCGGGGAAGGCAGGGTCGCCCTaGGTGCTGCTCGACGTGGATGGGTTCAGGGTGGAG +
Preference number: 6 (lower is better)
Translates to: PLPFISGKAGSP*VLLDVDGFRVE
Trigger: CTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATGGCAACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp ACCGCAGCCATCCGAGGGGTAGGAGGCTGTGCCAAGTaGCGTGGCCGGCGGGAGCTTGTCACACAGGTTGAT +
Preference number: 6 (lower is better)
Translates to: TAAIRGVGGCAK*RGRRELVTQVD
Trigger: ATCAACCTGTGTGACAAGCTCCCGCCGGCCACGGCACTTGGCACAGCCTCCTACCCCTCGGATGGCTGCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp ACCCTTGTGCACAATCTCCAACTGTTAGCGCGTAGCTaGCGCCGCCACCGCCACCACCGAGTCGCACCTGCC +
Preference number: 6 (lower is better)
Translates to: TLVHNLQLLARS*RRHRHHRVAPA
Trigger: GGCAGGTGCGACTCGGTGGTGGCGGTGGCGGCGGCAGCTACGCGCTAACAGTTGGAGATTGTGCACAAGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375678.7
ENST00000470428.1
CDS CCA 72 bp TTCCACCACAGCGACCCGCTTCAGAGAGATGCCCTCTaGCTCCGACAGGCCATCTGCCCCCGAGCCCGTCTT +
Preference number: 6 (lower is better)
Translates to: FHHSDPLQRDAL*LRQAICPRARL
Trigger: AAGACGGGCTCGGGGGCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGGTCGCTGTGGTGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000201961.6
ENST00000621426.6
CDS GCA 72 bp CATTCATCTCGGGGAAGGCAGGGTCGCCCTGCGTGCTaGTCGACGTGGATGGGTTCAGGGTGGAGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: HSSRGRQGRPAC*STWMGSGWRSH
Trigger: ATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCAGCACGCAGGGCGACCCTGCCTTCCCCGAGATGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp GTGGAGTGGGTGATGGCTGCGGAGTCCCGCGAGTGCTaGTTGTCCAGGGCTATGGGCTCATCCTGTGAGGAC +
Preference number: 6 (lower is better)
Translates to: VEWVMAAESREC*LSRAMGSSCED
Trigger: GTCCTCACAGGATGAGCCCATAGCCCTGGACAAGCAGCACTCGCGGGACTCCGCAGCCATCACCCACTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp ACCCGCCCTAGAAGACACCCATTAAAGAGCTCTGTCTaGTACTCTGGCGACCCGCCTCCCGGGGCACCGCAG +
Preference number: 6 (lower is better)
Translates to: TRPRRHPLKSSV*YSGDPPPGAPQ
Trigger: CTGCGGTGCCCCGGGAGGCGGGTCGCCAGAGTAGCAGACAGAGCTCTTTAATGGGTGTCTTCTAGGGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS CCA 72 bp TTCCACCACAGCGACCCGCTTCAGAGAGATGCCCTCTaGCTCCGACAGGCCATCTGCCCCCTCTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: FHHSDPLQRDAL*LRQAICPLFST
Trigger: GGTGGAGAAGAGGGGGCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGGTCGCTGTGGTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470428.1
CDS CAA 72 bp GAGTGGGTGATGGCTGCGGAGTCCCGCGAGTGCTGCTaGTCCAGGGCTATGGGCTCATCCTGTGAGGACTGG +
Preference number: 6 (lower is better)
Translates to: EWVMAAESRECC*SRAMGSSCEDW
Trigger: CCAGTCCTCACAGGATGAGCCCATAGCCCTGGACAAGCAGCACTCGCGGGACTCCGCAGCCATCACCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp GGGACAGCCTCCTTCCCTAGGGCAGTGCGCTCCAGGTaGCGGTGGGGTCAGTTCTGCTGTAGGATGAGGTTT +
Preference number: 6 (lower is better)
Translates to: GTASFPRAVRSR*RWGQFCCRMRF
Trigger: AAACCTCATCCTACAGCAGAACTGACCCCACCGGCACCTGGAGCGCACTGCCCTAGGGAAGGAGGCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359676.9
ENST00000621426.6
CDS CCA 72 bp TTCCACCACAGCGACCCGCTTCAGAGAGATGCCCTCTaGCTCCGACAGGCCATCTGCCCCCTTGAACTGTCC +
Preference number: 6 (lower is better)
Translates to: FHHSDPLQRDAL*LRQAICPLELS
Trigger: GGACAGTTCAAGGGGGCAGATGGCCTGTCGGAGCCAGAGGGCATCTCTCTGAAGCGGGTCGCTGTGGTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS CAA 90 bp TTGAATACTACACAGCGAGCCCGTCTTGACCGGCACATACACCACTaGGCCCATCTTGGGTTCCCGGCCGCTGCCCAGGCGGAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: LNTTQRARLDRHIHH*AHLGFPAAAQAEAL
Trigger: AAGGGCTTCCGCCTGGGCAGCGGCCGGGAACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGCTGTGTAGTATTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS GCA 72 bp TGCTCGACGTGGATGGGTTCAGGGTGGAGGAGCCATTaGCGCTGCCACTCTCAGAGGAGGAGTCATCGTCCT +
Preference number: 6 (lower is better)
Translates to: CSTWMGSGWRSH*RCHSQRRSHRP
Trigger: AGGACGATGACTCCTCCTCTGAGAGTGGCAGCGGCAATGGCTCCTCCACCCTGAACCCATCCACGTCGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359676.9
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS CCA 72 bp CGATCGCTCGGTAGGTTTTCTTCTGCCCAGCGTGCTTaGGGGCTTTGCCTGGCTCCGCTGAGCTCTCCACAT +
Preference number: 6 (lower is better)
Translates to: RSLGRFSSAQRA*GLCLAPLSSPH
Trigger: ATGTGGAGAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAAAACCTACCGAGCGATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000621426.6
CDS CCA 72 bp CTGAGGTCCGTGGGCCCATTACTGTGGTTTCCTGTTTaGAGGGAGGCAGGGGGCTGCAGGTTGCTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: LRSVGPLLWFPV*REAGGCRLLLK
Trigger: CTTGAGCAGCAACCTGCAGCCCCCTGCCTCCCTCCAAACAGGAAACCACAGTAATGGGCCCACGGACCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS CCA 72 bp CGCCGCCACCGCCACCACCGAGTCGCACCTGCCATCTaGAACAGGCCTCACATATTCCAAGACCTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: RRHRHHRVAPAI*NRPHIFQDLLS
Trigger: AGAAAGGAGGTCTTGGAATATGTGAGGCCTGTTCCAGATGGCAGGTGCGACTCGGTGGTGGCGGTGGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375678.7
ENST00000470428.1
CDS TCA 72 bp GCTGGGGCTCAGGCTGGAGGCCAGGTGCGGGTCAGCTaGCATCCATGTGGAGTCGCTCATATCAAAATCCTC +
Preference number: 6 (lower is better)
Translates to: AGAQAGGQVRVS*HPCGVAHIKIL
Trigger: GAGGATTTTGATATGAGCGACTCCACATGGATGTCAGCTGACCCGCACCTGGCCTCCAGCCTGAGCCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326071.8
ENST00000359676.9
ENST00000375677.5
ENST00000375678.7
ENST00000475781.1
ENST00000616976.1
ENST00000621426.6
CDS GCA 72 bp GGTAGGTTTTCTTCTGCCCAGCGTGCTTGGGGGCTTTaGCTGGCTCCGCTGAGCTCTCCACATGCATCGAGT +
Preference number: 6 (lower is better)
Translates to: GRFSSAQRAWGL*LAPLSSPHASS
Trigger: ACTCGATGCATGTGGAGAGCTCAGCGGAGCCAGGCAAAGCCCCCAAGCACGCTGGGCAGAAGAAAACCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000621426.6
CDS TCA 72 bp CAAAGTGGGGCCACCAGACATGATGTCCTCGGCTCCTaGAGGGAGGCACTGCTCCTGGGAATTCATCACTCG +
Preference number: 6 (lower is better)
Translates to: QSGATRHDVLGS*REALLLGIHHS
Trigger: CGAGTGATGAATTCCCAGGAGCAGTGCCTCCCTTCAGGAGCCGAGGACATCATGTCTGGTGGCCCCACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS GCA 72 bp TCCTCTGGTGAGCTAGGGCCACCTGGATTCCATGTGTaGTACACCCTAGGGGAAGAACGCCAGGATGTCTAC +
Preference number: 6 (lower is better)
Translates to: SSGELGPPGFHV*YTLGEERQDVY
Trigger: GTAGACATCCTGGCGTTCTTCCCCTAGGGTGTAGCACACATGGAATCCAGGTGGCCCTAGCTCACCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS CCA 72 bp CCTGTGAGGACTGGTAGATCTCTAGACGCATCCGCTTaGCTGCCTTTCTTGTCTCGCTCTCACAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: PVRTGRSLDASA*LPFLSRSHRQL
Trigger: CAGCTGCCTGTGAGAGCGAGACAAGAAAGGCAGCCAAGCGGATGCGTCTAGAGATCTACCAGTCCTCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359676.9
ENST00000616976.1
ENST00000621426.6
CDS TCA 72 bp GCCTGGGACCAGCCCCTCAAACAACGGCGCTACATTTaGGGATGTCATCTCCTCCAAGCAGCTCTGAGTCTT +
Preference number: 6 (lower is better)
Translates to: AWDQPLKQRRYI*GCHLLQAALSL
Trigger: AAGACTCAGAGCTGCTTGGAGGAGATGACATCCTCAAATGTAGCGCCGTTGTTTGAGGGGCTGGTCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS TCA 72 bp GGTTCCAGGCCATTGGAGTTAAAGTGCATCCTCTTCTaGCACTCCGTACAGCTCATCAGGAACCGGGTCACG +
Preference number: 6 (lower is better)
Translates to: GSRPLELKCILF*HSVQLIRNRVT
Trigger: CGTGACCCGGTTCCTGATGAGCTGTACGGAGTGTCAGAAGAGGATGCACTTTAACTCCAATGGCCTGGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000621426.6
CDS CCA 72 bp ATGATGTCCTCGGCTCCTGAAGGGAGGCACTGCTCCTaGGAATTCATCACTCGAAGCTTCATCTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: MMSSAPEGRHCS*EFITRSFICFR
Trigger: CCTGAAGCAGATGAAGCTTCGAGTGATGAATTCCCAGGAGCAGTGCCTCCCTTCAGGAGCCGAGGACATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS CCA 72 bp GAAATGCAGATCCGAATGACAATGACTTATGAGGGCTaGAGGGAGGAGTACTGTCCAGCATCCCCGGACGGA +
Preference number: 6 (lower is better)
Translates to: EMQIRMTMTYEG*REEYCPASPDG
Trigger: TCCGTCCGGGGATGCTGGACAGTACTCCTCCCTCCAGCCCTCATAAGTCATTGTCATTCGGATCTGCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375678.7
CDS GCA 72 bp ACATCCATGTGGAGTCGCTCATATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCTGGGCTGGAAGCGAGG +
Preference number: 6 (lower is better)
Translates to: TSMWSRSYQNPR*SQKSHPGLEAR
Trigger: CCTCGCTTCCAGCCCAGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATATGAGCGACTCCACATGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326071.8
ENST00000359676.9
ENST00000475781.1
CDS CCA 72 bp TTCCAAACGCGGGAACTGTCCATCCTCACTCTGCAATaGGGCGATCTGGCAGACACTTCCCAATCAAGTCAT +
Preference number: 6 (lower is better)
Translates to: FQTRELSILTLQ*GDLADTSQSSH
Trigger: ATGACTTGATTGGGAAGTGTCTGCCAGATCGCCCCATTGCAGAGTGAGGATGGACAGTTCCCGCGTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000201961.6
CDS CCA 72 bp GAGGGGCATGTTGTAATCAATAATCCCAGAGACCAGTaGAGATGGAGGCTCGTTTTCTTTGGGTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: EGHVVINNPRDQ*RWRLVFFGFQA
Trigger: GGCCTGGAACCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATTATTGATTACAACATGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000419612.1
ENST00000621426.6
CDS TCA 72 bp ACGAATGGCTCACGTTCTAGACATTATTGCCGGGAGTaGAAATTGGTTCCCTGTCTGTGGAGGGCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: TNGSRSRHYCRE*KLVPCLWRAVC
Trigger: ACAGACTGCCCTCCACAGACAGGGAACCAATTTTCACTCCCGGCAATAATGTCTAGAACGTGAGCCATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS TCA 72 bp ATCCATAAAATTGAATACTACACAGCGAGCCCGTCTTaGCCGGCACATACACCACTTGGCCCATCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: IHKIEYYTASPS*PAHTPLGPSWV
Trigger: AACCCAAGATGGGCCAAGTGGTGTATGTGCCGGTCAAGACGGGCTCGCTGTGTAGTATTCAATTTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS GCA 72 bp CTGGAACAGGCCTCACATATTCCAAGACCTCCTTTCTaGTTCGCTGAACCTCCATCTTCTTTCAAATCACGC +
Preference number: 6 (lower is better)
Translates to: LEQASHIPRPPF*FAEPPSSFKSR
Trigger: GCGTGATTTGAAAGAAGATGGAGGTTCAGCGAAGCAGAAAGGAGGTCTTGGAATATGTGAGGCCTGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375678.7
ENST00000470428.1
CDS GCA 72 bp ACATCCATGTGGAGTCGCTCATATCAAAATCCTCGCTaGTCACAGAAGTCTCATCCTGCTCCTGGGAATTCA +
Preference number: 6 (lower is better)
Translates to: TSMWSRSYQNPR*SQKSHPAPGNS
Trigger: TGAATTCCCAGGAGCAGGATGAGACTTCTGTGAGCAGCGAGGATTTTGATATGAGCGACTCCACATGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375677.5
ENST00000375678.7
ENST00000621426.6
CDS CCA 72 bp CATGTTGTAATCAATAATCCCAGAGACCAGTGGAGATaGAGGCTCGTTTTCTTTGGGTTCCAGGCCATTGGA +
Preference number: 6 (lower is better)
Translates to: HVVINNPRDQWR*RLVFFGFQAIG
Trigger: TCCAATGGCCTGGAACCCAAAGAAAACGAGCCTCCATCTCCACTGGTCTCTGGGATTATTGATTACAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201961.6
ENST00000375678.7
ENST00000419612.1
ENST00000621426.6
CDS GCA 72 bp ATTACGAGGGGATGCACAGTGCCAGCATACACTGAATaGTCAATATACAGTAACCTCGGTCATCACACGAAT +
Preference number: 6 (lower is better)
Translates to: ITRGCTVPAYTE*SIYSNLGHHTN
Trigger: ATTCGTGTGATGACCGAGGTTACTGTATATTGAGCATTCAGTGTATGCTGGCACTGTGCATCCCCTCGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS TCA 72 bp AGCAATTCAACTCCTTGGTATAAACTCGCCCATGCTTaGAATGGCCATCCATATTCAGGGATGTTCACTGAA +
Preference number: 6 (lower is better)
Translates to: SNSTPWYKLAHA*NGHPYSGMFTE
Trigger: TTCAGTGAACATCCCTGAATATGGATGGCCATTTCAAGCATGGGCGAGTTTATACCAAGGAGTTGAATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS TCA 72 bp TGCTTGAAATGGCCATCCATATTCAGGGATGTTCACTaGAGTCTTGCGAGAGCAGAATATCATAAACAATCC +
Preference number: 6 (lower is better)
Translates to: CLKWPSIFRDVH*SLARAEYHKQS
Trigger: GGATTGTTTATGATATTCTGCTCTCGCAAGACTTCAGTGAACATCCCTGAATATGGATGGCCATTTCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS GCA 72 bp ATTTTAATTCTGATCTTCAGGGTCATTACGAGGGGATaGACAGTGCCAGCATACACTGAATGCTCAATATAC +
Preference number: 6 (lower is better)
Translates to: ILILIFRVITRG*TVPAYTECSIY
Trigger: GTATATTGAGCATTCAGTGTATGCTGGCACTGTGCATCCCCTCGTAATGACCCTGAAGATCAGAATTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485364.1
CDS CAA 72 bp AATGGCCATCCATATTCAGGGATGTTCACTGAAGTCTaGCGAGAGCAGAATATCATAAACAATCCAAATGTC +
Preference number: 6 (lower is better)
Translates to: NGHPYSGMFTEV*REQNIINNPNV
Trigger: GACATTTGGATTGTTTATGATATTCTGCTCTCGCAAGACTTCAGTGAACATCCCTGAATATGGATGGCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485364.1