RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101746

Ensembl transcript IDs: ENST00000261592.10, ENST00000535384.5, ENST00000538587.5, ENST00000586309.1, ENST00000586314.5, ENST00000586553.1, ENST00000587971.5, ENST00000588355.1, ENST00000589544.5, ENST00000590712.5, ENST00000590846.1, ENST00000591917.5

Found 583 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCGCAGAGAGGGGACTGTCACTCAGGTTCAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCATCACTGTTGGAGTCTCCCATCTCC +
Preference number: 1 (lower is better)
Translates to: CAERGLSLRFSGCSS*SSPVLPSLLESPIS
Trigger: GGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACCTGAGTGACAGTCCCCTCTCTGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 90 bp CCTGCAACAAGCTGTCTCACGGCATTGATTTCAGTTGGACTCAGCTaGGGTCTGGAGTTTGAGCTGCTGGAGGATCCTGAGCTAGTCGCC +
Preference number: 1 (lower is better)
Translates to: PATSCLTALISVGLS*GLEFELLEDPELVA
Trigger: GGCGACTAGCTCAGGATCCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCTTGTTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR GCA 90 bp TGTCACTCAGGTTCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTTaGCATCACTGTTGGAGTCTCCCATCTCCCTGCTGTGTGTTCCCC +
Preference number: 1 (lower is better)
Translates to: CHSGSVAVHLAPAQF*HHCWSLPSPCCVFP
Trigger: GGGGAACACACAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACCTGAGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 90 bp TGTACAGCACGTCCTGTGAGCCTGGAACAGCTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTTTACACTGTTTGTCAGCTGGAGCAG +
Preference number: 1 (lower is better)
Translates to: CTARPVSLEQLMLSK*PGSPLVYTVCQLEQ
Trigger: CTGCTCCAGCTGACAAACAGTGTAAACCAGAGGCGACCCAGGCCACTTACTCAACATCAGCTGTTCCAGGCTCACAGGACGTGCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 90 bp TCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTTGCCATCACTGTTaGAGTCTCCCATCTCCCTGCTGTGTGTTCCCCCTGAAGCAATTG +
Preference number: 1 (lower is better)
Translates to: SVAVHLAPAQFCHHC*SLPSPCCVFPLKQL
Trigger: CAATTGCTTCAGGGGGAACACACAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR TCA 90 bp ATGCAGCTGATTCTCGATATCCTGCAACAAGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCTGGGGTCTGGAGTTTGAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: MQLILDILQQAVSRH*FQLDSAGVWSLSCW
Trigger: CCAGCAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCTTGTTGCAGGATATCGAGAATCAGCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 90 bp TCGGCTTCAACGCCGTCTGTCTCATTAACTTTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCGTCCTCATCTCCCCTGTTTAGTGAG +
Preference number: 1 (lower is better)
Translates to: SASTPSVSLTFSESS*SSWSSSSSSPLFSE
Trigger: CTCACTAAACAGGGGAGATGAGGACGAAGATGACCACGAGGACCATGACGATTCGGAGAAAGTTAATGAGACAGACGGCGTTGAAGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR TCA 90 bp CTCCTAGCCCTCTGTAACTATGGTAACTATAGGTCCCATTTCCATTaGTGTACAGCACGTCCTGTGAGCCTGGAACAGCTGATGTTGAGT +
Preference number: 1 (lower is better)
Translates to: LLALCNYGNYRSHFH*CTARPVSLEQLMLS
Trigger: ACTCAACATCAGCTGTTCCAGGCTCACAGGACGTGCTGTACATCAATGGAAATGGGACCTATAGTTACCATAGTTACAGAGGGCTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR GCA 90 bp TGTTTAGTGAGAGGTCCTCAGCTCCTCGGTCTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGTAACTATGTGCAGGAGACTTGCTTC +
Preference number: 1 (lower is better)
Translates to: CLVRGPQLLGLHSHF*QSHSWSNYVQETCF
Trigger: GAAGCAAGTCTCCTGCACATAGTTACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAGACCGAGGAGCTGAGGACCTCTCACTAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR TCA 90 bp GGACATACTAAAGTAGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCA +
Preference number: 1 (lower is better)
Translates to: GHTKVAQVLQRSEFL*STLTHHLRIKDNVA
Trigger: TGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCTACTTTAGTATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR CAA 90 bp CTGTCACTCAGGTTCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCTCCCATCTCCCTGCTGTGTGTTCCC +
Preference number: 2 (lower is better)
Translates to: LSLRFSGCSSCSSPV*PSLLESPISLLCVP
Trigger: GGGAACACACAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACCTGAGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR GCA 90 bp CTAGTCGCCAATTGTCTCTTCATGCTGAGATCAGTGGGTCCACTGCTGGAAGCAAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: LVANCLFMLRSVGPLLEASLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...TGCTTCCAGCAGTGGACCCACTGATCTCAGCATGAAGAGACAATTGGCGACTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CCA 90 bp CAGTGGGTCCACTGCTGGAAGCATCATTCAGATTTAGCAGACCCCCTCCTAGCCACACTGTTTGTCAGCTaGAGCAGACTCATCCTGCTG +
Preference number: 2 (lower is better)
Translates to: QWVHCWKHHSDLADPLLATLFVS*SRLILL
Trigger: CAGCAGGATGAGTCTGCTCCAGCTGACAAACAGTGT...GGCTAGGAGGGGGTCTGCTAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CAA 90 bp TTCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTTGCCATCACTGTaGGAGTCTCCCATCTCCCTGCTGTGTGTTCCCCCTGAAGCAATT +
Preference number: 2 (lower is better)
Translates to: FSGCSSCSSPVLPSL*ESPISLLCVPPEAI
Trigger: AATTGCTTCAGGGGGAACACACAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CAA 90 bp TCAGCTGGAGCAGACTCATCCTGCTGTCTCTCCAGACGCATCCTCTaGGCGGCATTTCTACTCTCACTCTCACAAGCTGAAGCCAAGATA +
Preference number: 2 (lower is better)
Translates to: SAGADSSCCLSRRIL*AAFLLSLSQAEAKI
Trigger: TATCTTGGCTTCAGCTTGTGAGAGTGAGAGTAGAAATGCCGCCAAGAGGATGCGTCTGGAGAGACAGCAGGATGAGTCTGCTCCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CAA 90 bp CTGTGTGTTCCCCCTGAAGCAATTGAACTGTGCCCCAGAGTCTCATaGCCATTAAAGCTCTCTGCAGCAGAATCATCATCTTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LCVPPEAIELCPRVS*PLKLSAAESSSCWP
Trigger: TGGCCAGCAAGATGATGATTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAACACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CAA 90 bp AATGCAGCTGATTCTCGATATCCTGCAACAAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGCTGGGGTCTGGAGTTTGAGCTGCTG +
Preference number: 2 (lower is better)
Translates to: NAADSRYPATSCLTA*ISVGLSWGLEFELL
Trigger: CAGCAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCTTGTTGCAGGATATCGAGAATCAGCTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CCA 90 bp TCACAAGCTGAAGCCAAGATACTCTCTGCAACTGCTGAAGTAAGGTGGGAAGGAGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: SQAEAKILSATAEVRWEGVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...TCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CCA 90 bp TCACAAGCTGAAGCCAAGATACTCTCTGCAACTGCTGAAGTAAGGTGGGAAGGATTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 2 (lower is better)
Translates to: SQAEAKILSATAEVRWEGFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...TCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp GAGCTAGTCGCCAATTGTCTCTTCATGCTGAGATCAGTGGGTCCACTGCTGGAAAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: ELVANCLFMLRSVGPLLEKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...TTCCAGCAGTGGACCCACTGATCTCAGCATGAAGAGACAATTGGCGACTAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CCA 90 bp AGTCATCTACATCCAGGTGCTGCTAGAGGGATGCCTGGAGACAGCAGCGGCAATGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 2 (lower is better)
Translates to: SHLHPGAARGMPGDSSGNGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...ATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
3UTR-3UTR CCA 90 bp CTAGTCGCCAATTGTCTCTTCATGCTGAGATCAGTGGGTCCACTGCTGGAAGCATGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 2 (lower is better)
Translates to: LVANCLFMLRSVGPLLEACWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...TGCTTCCAGCAGTGGACCCACTGATCTCAGCATGAAGAGACAATTGGCGACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp GCAATTGAACTGTGCCCCAGAGTCTCATTGCCATTAAAGCTCTCTGCAGCAGAAAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 2 (lower is better)
Translates to: AIELCPRVSLPLKLSAAERSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...TTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp ATTCCGAAGTTAGCTGCGCAGAGAGGGGACTGTCACTCAGGTTCAGTGGCTGTTGAAGGCATAGCTCTCTaGAATCTGTATTTGAAACTT +
Preference number: 2 (lower is better)
Translates to: IPKLAAQRGDCHSGSVAVEGIAL*NLYLKL
Trigger: AAGTTTCAAATACAGATTTCAGAGAGCTATGCCTTC...AACAGCCACTGAACCTGAGTGACAGTCCCCTCTCTGCGCAGCTAACTTCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp GTCGCCAATTGTCTCTTCATGCTGAGATCAGTGGGTCCACTGCTGGAAGCATCATTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 2 (lower is better)
Translates to: VANCLFMLRSVGPLLEASFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...TGATGCTTCCAGCAGTGGACCCACTGATCTCAGCATGAAGAGACAATTGGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTATTGTCTCTTCATGCTaGGATCAGTGGGTCCACTGC +
Preference number: 2 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLIVSSC*DQWVHC
Trigger: GCAGTGGACCCACTGATCTCAGCATGAAGAGACAAT...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CCA 90 bp GTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGTGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 2 (lower is better)
Translates to: VGHGNWHVVVNHAGHQSGCWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...CCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
3UTR CAA 90 bp TGCAGCAGAATCATCATCTTGCTGGCCATGAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATTGGAGCTAAGATCAGAGTTCACAGC +
Preference number: 2 (lower is better)
Translates to: CSRIIILLAMKILGT*HSFFKIGAKIRVHS
Trigger: GCTGTGAACTCTGATCTTAGCTCCAATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGATGATTCTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 2 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 2 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR-3UTR GCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGTGTTGTAGTCAATCATaGTGGTCACCAAAGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMCCSQS*WSPKWE
Trigger: CTCCCACTTTGGTGACCAGCATGATTGACTACAACA...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGATCAGTTGGACTCAGCTaGGGTCTGGAGTTTGAGCTG +
Preference number: 2 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRSVGLS*GLEFEL
Trigger: CAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGA...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR-3UTR TCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 2 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR GCA 72 bp CATTCAGTCATCTACATCCAGGTGCTGCTAGAGGGATaGCTGGAGACAGCAGCGGCAATCAGGAACGAGCAG +
Preference number: 3 (lower is better)
Translates to: HSVIYIQVLLEG*LETAAAIRNEQ
Trigger: CTGCTCGTTCCTGATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
3UTR GCA 72 bp GGTTCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTTaGCATCACTGTTGGAGTCTCCCATCTCCCTGCTGT +
Preference number: 3 (lower is better)
Translates to: GSVAVHLAPAQF*HHCWSLPSPCC
Trigger: ACAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 72 bp CGTCCTGTGAGCCTGGAACAGCTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTTTACACTGTTTGTCAG +
Preference number: 3 (lower is better)
Translates to: RPVSLEQLMLSK*PGSPLVYTVCQ
Trigger: CTGACAAACAGTGTAAACCAGAGGCGACCCAGGCCACTTACTCAACATCAGCTGTTCCAGGCTCACAGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 72 bp AGCTGTCTCACGGCATTGATTTCAGTTGGACTCAGCTaGGGTCTGGAGTTTGAGCTGCTGGAGGATCCTGAG +
Preference number: 3 (lower is better)
Translates to: SCLTALISVGLS*GLEFELLEDPE
Trigger: CTCAGGATCCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR GCA 72 bp CAGTTTTGCCATCACTGTTGGAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAGCAATTGAACTGTGCC +
Preference number: 3 (lower is better)
Translates to: QFCHHCWSLPSP*CVFPLKQLNCA
Trigger: GGCACAGTTCAATTGCTTCAGGGGGAACACACAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR GCA 72 bp AGGGGACTGTCACTCAGGTTCAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCATCACTGTTGGAGTCT +
Preference number: 3 (lower is better)
Translates to: RGLSLRFSGCSS*SSPVLPSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACCTGAGTGACAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 72 bp ACGCCGTCTGTCTCATTAACTTTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCGTCCTCATCTCCCCTG +
Preference number: 3 (lower is better)
Translates to: TPSVSLTFSESS*SSWSSSSSSPL
Trigger: CAGGGGAGATGAGGACGAAGATGACCACGAGGACCATGACGATTCGGAGAAAGTTAATGAGACAGACGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR GCA 72 bp AGAGGTCCTCAGCTCCTCGGTCTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGTAACTATGTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: RGPQLLGLHSHF*QSHSWSNYVQE
Trigger: CTCCTGCACATAGTTACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAGACCGAGGAGCTGAGGACCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR TCA 72 bp ATTCTCGATATCCTGCAACAAGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCTGGGGTCTGGAGTTTG +
Preference number: 3 (lower is better)
Translates to: ILDILQQAVSRH*FQLDSAGVWSL
Trigger: CAAACTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCTTGTTGCAGGATATCGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR-3UTR CAA 90 bp TCACAAGCTGAAGCCAAGATACTCTCTGCAACTGCTGAAGTAAGGTGGGAAGGAGCCTCTCGTTCCATCTaGAGGTCAGAAATTAGAAGA +
Preference number: 3 (lower is better)
Translates to: SQAEAKILSATAEVRWEGASRSI*RSEIRR
Trigger: TCTTCTAATTTCTGACCTCAAGATGGAACGAGAGGC...TCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR TCA 72 bp AAGCTCTCTGCAGCAGAATCATCATCTTGCTGGCCATaGAGATTCTGGGGACTTTGCATTCTTTCTTCAAGA +
Preference number: 3 (lower is better)
Translates to: KLSAAESSSCWP*RFWGLCILSSR
Trigger: TCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGATGATTCTGCTGCAGAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CCA 72 bp CTGCAGCTTCATGTGTTTCATGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCATGCTGGTCACCAAAGT +
Preference number: 3 (lower is better)
Translates to: LQLHVFHVGHGN*HVVVNHAGHQS
Trigger: ACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTACATGAAACACATGAAGCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
3UTR-3UTR CAA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTAAATGCAGGCTTCTCTaGGAAGTAGTTCCTGATGTG +
Preference number: 3 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLKCRLL*EVVPDV
Trigger: CACATCAGGAACTACTTCCAAGAGAAGCCTGCATTT...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
3UTR-3UTR CAA 90 bp GTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGAAACCTCTTCCTGTCTaGATTTTTCCTGAAGAGTAT +
Preference number: 3 (lower is better)
Translates to: VGHGNWHVVVNHAGHQSGKPLPV*IFPEEY
Trigger: ATACTCTTCAGGAAAAATCAAGACAGGAAGAGGTTT...CCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591917.5
3UTR TCA 72 bp AAAGTAGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCACTTACGGATCAAGGAC +
Preference number: 3 (lower is better)
Translates to: KVAQVLQRSEFL*STLTHHLRIKD
Trigger: GTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR TCA 72 bp AGGGCACAGTTCATTGTAAGTTGCAGCTGCATCCGCTaGGAGTTCCTTACATTATTTTTAGCTAGAACTGAA +
Preference number: 3 (lower is better)
Translates to: RAQFIVSCSCIR*EFLTLFLARTE
Trigger: TTCAGTTCTAGCTAAAAATAATGTAAGGAACTCTCAGCGGATGCAGCTGCAACTTACAATGAACTGTGCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261592.10
3UTR GCA 72 bp ACTACACACAAGAGTGCAAATTTTCAGATTGTCACTTaGAACCTCTTAACATTCAGTCATCTACATCCAGGT +
Preference number: 3 (lower is better)
Translates to: TTHKSANFQIVT*NLLTFSHLHPG
Trigger: ACCTGGATGTAGATGACTGAATGTTAAGAGGTTGCAAGTGACAATCTGAAAATTTGCACTCTTGTGTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
3UTR GCA 72 bp ATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTaGAGTAAGACCAGAAGTATCTCTGTTGGGAAATCA +
Preference number: 3 (lower is better)
Translates to: MWHNGSISLKRL*SKTRSISVGKS
Trigger: TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
3UTR-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATT +
Preference number: 3 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRKILGT*HSFFKI
Trigger: AATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTT...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR TCA 72 bp CTGAAATATGGGAGTGTGGAAAACCTCTTCCTGTCTTaGTTTTTCCTGAAGAGTATGTGTAATATGATACAT +
Preference number: 3 (lower is better)
Translates to: LKYGSVENLFLS*FFLKSMCNMIH
Trigger: ATGTATCATATTACACATACTCTTCAGGAAAAATCAAGACAGGAAGAGGTTTTCCACACTCCCATATTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591917.5
CDS-3UTR GCA 90 bp CATCTCCCCTGTTTAGTGAGAGGTCCTCAGCTCCTCGGTCTACACTCTCATTTTGCATTGGGCTCTCAATaGCAGTGCCTCGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: HLPCLVRGPQLLGLHSHFALGSQ*QCLAAP
Trigger: AGGCGCCGCGAGGCACTGGCATTGAGAGCCCAATGC...AAAATGAGAGTGTAGACCGAGGAGCTGAGGACCTCTCACTAAACAGGGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp GCAATTGAACTGTGCCCCAGAGTCTCATTGCCATTAAAGCTCTCTGCAGCAGAAGTGCCTCGCGGCGCCTaGGCTAGAGCTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AIELCPRVSLPLKLSAAEVPRGA*ARALWP
Trigger: TGGCCACAAAGCTCTAGCCCAGGCGCCGCGAGGCAC...TTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp AGTCATCTACATCCAGGTGCTGCTAGAGGGATGCCTGGAGACAGCAGCGGCAATCGCTGTAGCTGGTCCTaGCACTTGCAAAATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SHLHPGAARGMPGDSSGNRCSWS*HLQNGQ
Trigger: CTGACCATTTTGCAAGTGTCAGGACCAGCTACAGCG...ATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGCCACGTTGCAGGGATaGGAGGTCCCGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDATLQG*EVPAAA
Trigger: CGCTGCGGCCGGGACCTCGCATCCCTGCAACGTGGC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTCAGCCCCGGCCACGTTaGAGGGATGCGAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLQPRPR*RDARSR
Trigger: CCGGGACCTCGCATCCCTGCAACGTGGCCGGGGCTG...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCGGCCGCTGGCCGGATaGTCCCAGCGCACTTCGCAC +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDRPLAG*SQRTSH
Trigger: GTGCGAAGTGCGCTGGGAGCATCCGGCCAGCGGCCG...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGCGTAGAGCACTTGCTTaGCGCCGCCGCCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMRRALA*RRRLPR
Trigger: GCGGGGGAGGCGGCGGCGCCAAGCAAGTGCTCTACG...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCGTGTGCCTCGCGGCGCCTaGGCTAGAGCTTTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VSSLLSSVFPNLFSIWPRVPRGA*ARALWP
Trigger: TGGCCACAAAGCTCTAGCCCAGGCGCCGCGAGGCAC...ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CCA 90 bp GTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCGTGCTCCCCAGCCCCACTaGCTTCTGCAGCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSSLLSSVFPNLFSIWPRAPQPH*LLQREA
Trigger: AGCCTCACGCTGCAGAAGCCAGTGGGGCTGGGGAGC...ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586309.1
3UTR CAA 72 bp AGGTTCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCTCCCATCTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RFSGCSSCSSPV*PSLLESPISLL
Trigger: CAGCAGGGAGATGGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCCCCGCCCAGCGCCTTTaGGCCCCGAAGGGCACACGG +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLPAQRL*APKGTR
Trigger: CCGTGTGCCCTTCGGGGCTCAAAGGCGCTGGGCGGG...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp TCAGGTTCAGTGGCTGTTCATCTTGCTCCAGCCCAGTTTTGCCATCACTGTTGGGCTGCTGGAGGATCCTaGGCTAGTCGCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: SGSVAVHLAPAQFCHHCWAAGGS*ASRQLS
Trigger: AGACAATTGGCGACTAGCTCAGGATCCTCCAGCAGC...CCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACTGAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp TCCGAAGTTAGCTGCGCAGAGAGGGGACTGTCACTCAGGTTCAGTGGCTGTTCAGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SEVSCAERGLSLRFSGCSAVSRH*FQLDSA
Trigger: AGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGC...TGAACAGCCACTGAACCTGAGTGACAGTCCCCTCTCTGCGCAGCTAACTTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp GGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGAGGACGCCATCCGTGGCATaGTGCAGAAAGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHGNWHVVVNHAGHQSGRTPSVA*CRKVSC
Trigger: GCAGGAGACCTTTCTGCATCATGCCACGGATGGCGT...CCTCCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR GCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGGCCACGTTGCAGGGATaGGAGGTCCCGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGATLQG*EVPAAA
Trigger: CGCTGCGGCCGGGACCTCGCATCCCTGCAACGTGGC...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp CAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCGTTTCCACATGCATCGAATAGCCCCACTGGCTTCTaGAGCGTGAGGCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: QRVSEFVLHLAPFPHASNSPTGF*SVRLRC
Trigger: GCATCTCAGCCTCACGCTGCAGAAGCCAGTGGGGCT...ATTCGATGCATGTGGAAACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CCA 90 bp CAGTGGGTCCACTGCTGGAAGCATCATTCAGATTTAGCAGACCCCCTCCTAGCCTCGTCATGGTCCTCGTaGTCATCTTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QWVHCWKHHSDLADPLLASSWSS*SSSSSS
Trigger: AGATGAGGACGAAGATGACCACGAGGACCATGACGA...GGCTAGGAGGGGGTCTGCTAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp AGTCATCTACATCCAGGTGCTGCTAGAGGGATGCCTGGAGACAGCAGCGGCAATACACTGTTTGTCAGCTaGAGCAGACTCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHLHPGAARGMPGDSSGNTLFVS*SRLILL
Trigger: CAGCAGGATGAGTCTGCTCCAGCTGACAAACAGTGT...ATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
3UTR CAA 72 bp GCAGACTCATCCTGCTGTCTCTCCAGACGCATCCTCTaGGCGGCATTTCTACTCTCACTCTCACAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: ADSSCCLSRRIL*AAFLLSLSQAE
Trigger: TTCAGCTTGTGAGAGTGAGAGTAGAAATGCCGCCAAGAGGATGCGTCTGGAGAGACAGCAGGATGAGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGCTGGAGCCGGGACTaGCAGCCCGGGCGGAGCGCA +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWGWSRD*QPGRSA
Trigger: TGCGCTCCGCCCGGGCTGTCAGTCCCGGCTCCAGCC...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CCCGTCGTAAAGATAGCTTCTCATCTACCCCTACGCCATCATTCACATAAAAACGCATTGGGCTCTCAATaGCAGTGCCTCGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PVVKIASHLPLRHHSHKNALGSQ*QCLAAP
Trigger: AGGCGCCGCGAGGCACTGGCATTGAGAGCCCAATGC...GTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGAAGCTATCTTTACGACGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGCCGAAGGCAGGCCGCTaGCGGCGGGTATCCCGAATA +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMPKAGR*RRVSRI
Trigger: TATTCGGGATACCCGCCGCCAGCGGCCTGCCTTCGG...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAACGTTCCAGGGGGATGTaGGTAACCGAAGGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQRSRGM*VTEGRP
Trigger: CGGCCTGCCTTCGGTTACCCACATCCCCCTGGAACG...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp GCCTGGGTCGCCTCTGGTTTACACTGTTTGTCAGCTGGAGCAGACTCATCCTGCTGTAGTCAATCATGCTaGTCACCAAAGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: AWVASGLHCLSAGADSSCCSQSC*SPKWEV
Trigger: AACCTCCCACTTTGGTGACCAGCATGATTGACTACA...GCAGGATGAGTCTGCTCCAGCTGACAAACAGTGTAAACCAGAGGCGACCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp CCGCTCGGCTTCAACGCCGTCTGTCTCATTAACTTTCTCCGAATCGTCATGGTCACACTGTTTGTCAGCTaGAGCAGACTCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLGFNAVCLINFLRIVMVTLFVS*SRLILL
Trigger: CAGCAGGATGAGTCTGCTCCAGCTGACAAACAGTGT...GACCATGACGATTCGGAGAAAGTTAATGAGACAGACGGCGTTGAAGCCGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp CCGCTCGGCTTCAACGCCGTCTGTCTCATTAACTTTCTCCGAATCGTCATGGTCGGCATTGATTTCAGTTaGACTCAGCTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLGFNAVCLINFLRIVMVGIDFS*TQLGSG
Trigger: TCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCC...GACCATGACGATTCGGAGAAAGTTAATGAGACAGACGGCGTTGAAGCCGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTACCCGTGGTCCAGGAGTaGGGGCTGCGCCTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLPVVQE*GLRLSR
Trigger: TCGGGAGAGGCGCAGCCCTCACTCCTGGACCACGGG...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp AGTGGCTGTTCATCTTGCTCCAGCCCAGTTTTGCCATCACTGTTGGAGTCTCCCACTCTCTGCAACTGCTaGAGTAAGGTGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SGCSSCSSPVLPSLLESPTLCNC*SKVGRN
Trigger: ATTCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGT...GGGAGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp CAGCTGATGTTGAGTAAGTGGCCTGGGTCGCCTCTGGTTTACACTGTTTGTCAGATTGTCTCTTCATGCTaGGATCAGTGGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: QLMLSKWPGSPLVYTVCQIVSSC*DQWVHC
Trigger: GCAGTGGACCCACTGATCTCAGCATGAAGAGACAAT...CTGACAAACAGTGTAAACCAGAGGCGACCCAGGCCACTTACTCAACATCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAGCCCGGCGCCTGGGCTaGGTCCGAGCCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRARRLG*VRAHLL
Trigger: AAGAAGGTGGGCTCGGACGCAGCCCAGGCGCCGGGC...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAAACGGCCCGACCAGTaGCCGGCGCCTGGGCTGCGT +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVKRPDQ*PAPGLR
Trigger: ACGCAGCCCAGGCGCCGGGCACTGGTCGGGCCGTTT...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACCCGGGGAGCGGCTCTaGCAGGAAAACGGCCCGACC +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRPGERL*QENGPT
Trigger: GGTCGGGCCGTTTTCCTGGCAGAGCCGCTCCCCGGG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCGCCGCAGCGGGAGCCTaGTTTGGGTGGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLAAAGA*FGWGKG
Trigger: TCCCTTCCCCCACCCAAAGCAGGCTCCCGCTGCGGC...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTCAGCCCCGGCCACGTTaGAGGGATGCGAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSQPRPR*RDARSR
Trigger: CCGGGACCTCGCATCCCTGCAACGTGGCCGGGGCTG...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp AGTCATCTACATCCAGGTGCTGCTAGAGGGATGCCTGGAGACAGCAGCGGCAATTGTTGTAGTCAATCATaGTGGTCACCAAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SHLHPGAARGMPGDSSGNCCSQS*WSPKWE
Trigger: CTCCCACTTTGGTGACCAGCATGATTGACTACAACA...ATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFWHSEQLIRNRVTASLGSLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...ACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp GGAATAGGTCGAGAATTAAAAGCTTTCAGCCGCTCGGCTTCAACGCCGTCTGTCTATTCCGAAGTTAGCTaGGCAGAGAGGGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: GIGRELKAFSRSASTPSVYSEVS*AERGLS
Trigger: TGACAGTCCCCTCTCTGCGCAGCTAACTTCGGAATA...GACAGACGGCGTTGAAGCCGAGCGGCTGAAAGCTTTTAATTCTCGACCTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp TGGCCTGGGTCGCCTCTGGTTTACACTGTTTGTCAGCTGGAGCAGACTCATCCTGCTGGAGTAACTATGTaGAGGAGACTTGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: WPGSPLVYTVCQLEQTHPAGVTM*RRLASI
Trigger: AATGGAAGCAAGTCTCCTGCACATAGTTACTCCAGC...AGGATGAGTCTGCTCCAGCTGACAAACAGTGTAAACCAGAGGCGACCCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAACACCAGTCCTGGAACTaGCGGTACATGTCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQHQSWN*RYMSRS
Trigger: CGAGCGCGACATGTACCGCCAGTTCCAGGACTGGTG...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATCCGGCTGGCCCAGCTaGAAGCCCTTCGATTTGACC +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQSGWPS*KPFDLT
Trigger: GGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGA...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAACGTAGAGCACTTGCTTaGCGCCGCCGCCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQRRALA*RRRLPR
Trigger: GCGGGGGAGGCGGCGGCGCCAAGCAAGTGCTCTACG...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGCCCCTACGCCATCCGTaGCATGATGCAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VGHGNWHVVVNHAGHQSGPLRHP*HDAERS
Trigger: AGACCTTTCTGCATCATGCCACGGATGGCGTAGGGG...CCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGTGTGTGCGTGTGTGTaGGCAAGGGAGCGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLVCACV*ARERGC
Trigger: ACACCCTCGCTCCCTTGCTCACACACACGCACACAC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp CAGTGGGTCCACTGCTGGAAGCATCATTCAGATTTAGCAGACCCCCTCCTAGCCCCTCTCGTTCCATCTTaGGGTCAGAAATTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QWVHCWKHHSDLADPLLAPLVPS*GQKLED
Trigger: ATCTTCTAATTTCTGACCTCAAGATGGAACGAGAGG...GGCTAGGAGGGGGTCTGCTAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAAAGGGAGCGAGGGTGTaGGGTGTGCAGGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQKGARV*GVQGVR
Trigger: GCGCACCCCCTGCACACCGCACACCCTCGCTCCCTT...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTGCCGCAGCGGGAGCCTaGTTTGGGTGGGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSAAAGA*FGWGKG
Trigger: TCCCTTCCCCCACCCAAAGCAGGCTCCCGCTGCGGC...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGCGGCCGCTGGCCGGATaGTCCCAGCGCACTTCGCAC +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWRPLAG*SQRTSH
Trigger: GTGCGAAGTGCGCTGGGAGCATCCGGCCAGCGGCCG...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp GCTTCTCATCTACCCCTACGCCATCATTCACATAAAAACTTGTATGCAATTGTAGGCTCTCAATGCCAGTaGCTCGCGGCGCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ASHLPLRHHSHKNLYAIVGSQCQ*LAAPGL
Trigger: TAGCCCAGGCGCCGCGAGGCACTGGCATTGAGAGCC...TACAATTGCATACAAGTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR GCA 90 bp TCACAAGCTGAAGCCAAGATACTCTCTGCAACTGCTGAAGTAAGGTGGGAAGGAAGCGTGAGGCTGAGATaGATTGGGCTCTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: SQAEAKILSATAEVRWEGSVRLR*IGLSMP
Trigger: TGGCATTGAGAGCCCAATGCATCTCAGCCTCACGCT...TCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp CATCATCTTGCTGGCCATGAAGATTCTGGGGACTTTGCATTCTTTCTTCAAGATAGCCCCACTGGCTTCTaGAGCGTGAGGCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: HHLAGHEDSGDFAFFLQDSPTGF*SVRLRC
Trigger: GCATCTCAGCCTCACGCTGCAGAAGCCAGTGGGGCT...ATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGCGTAGAGCACTTGCTTaGCGCCGCCGCCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWRRALA*RRRLPR
Trigger: GCGGGGGAGGCGGCGGCGCCAAGCAAGTGCTCTACG...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp CAGTGGGTCCACTGCTGGAAGCATCATTCAGATTTAGCAGACCCCCTCCTAGCCTGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: QWVHCWKHHSDLADPLLACWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...GGCTAGGAGGGGGTCTGCTAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAGACTCAGCTGGGGTCTaGAGTTTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQDSAGV*SLSCWR
Trigger: CCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTC...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AGTCATCTACATCCAGGTGCTGCTAGAGGGATGCCTGGAGACAGCAGCGGCAATCTGAGTAGCCAAATATaGGTTCCTCTGGACTATTTT +
Preference number: 4 (lower is better)
Translates to: SHLHPGAARGMPGDSSGNLSSQI*VPLDYF
Trigger: AAAATAGTCCAGAGGAACTCATATTTGGCTACTCAG...ATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGAGTCCCCGTAAGTCCTaGGGCACCAGTCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMSPRKS*GTSPGT
Trigger: AGTTCCAGGACTGGTGCCTCAGGACTTACGGGGACT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR TCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCGTCTTGGTCTTGCCTaGGTCCCCGTAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDRLGLA*VPVSPE
Trigger: CTCAGGACTTACGGGGACTCAGGCAAGACCAAGACG...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR TCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATTCGACTCGGAGCCATTaGGGAGCTGGACGATCCGTT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDSTRSH*GAGRSV
Trigger: AACGGATCGTCCAGCTCCTCAATGGCTCCGAGTCGA...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTCGACTCGGAGCCATTaGGGAGCTGGACGATCCGTT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLSTRSH*GAGRSV
Trigger: AACGGATCGTCCAGCTCCTCAATGGCTCCGAGTCGA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GCAATTGAACTGTGCCCCAGAGTCTCATTGCCATTAAAGCTCTCTGCAGCAGAATCATCTTGCTGGCCATaGAGATTCTGGGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: AIELCPRVSLPLKLSAAESSCWP*RFWGLC
Trigger: GCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGA...TTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp CCACAGCTACCCGTCGTAAAGATAGCTTCTCATCTACCCCTACGCCATCATTCAGTTCCCATCTTCTTGTaGAGAAAATCGACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQLPVVKIASHLPLRHHSVPIFL*RKSTLL
Trigger: CAGCAGCGTCGATTTTCTTCACAAGAAGATGGGAAC...TGAATGATGGCGTAGGGGTAGATGAGAAGCTATCTTTACGACGGGTAGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR GCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGGGAAAGCGGGATGTTTaGGCCCACCGCGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGGKRDV*AHRAVA
Trigger: AGCTACAGCGCGGTGGGCGCAAACATCCCGCTTTCC...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCGTTTCCACATGCATCGAATCTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: QRVSEFVLHLAPFPHASNLLHQI*HPTCSP
Trigger: TGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAG...ATTCGATGCATGTGGAAACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR GCA 90 bp CATCTCCCCTGTTTAGTGAGAGGTCCTCAGCTCCTCGGTCTACACTCTCATTTTTGCAGAAAGGTCTCCTaGATCAGATCTGCCATCCTA +
Preference number: 4 (lower is better)
Translates to: HLPCLVRGPQLLGLHSHFCRKVS*IRSAIL
Trigger: TAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCA...AAAATGAGAGTGTAGACCGAGGAGCTGAGGACCTCTCACTAAACAGGGGAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAGGCTCTCAATGCCAGTaGCTCGCGGCGCCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLGSQCQ*LAAPGL
Trigger: TAGCCCAGGCGCCGCGAGGCACTGGCATTGAGAGCC...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGAGCTTCCCCAGCCACTaGCCCCGTGGTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQSFPSH*PRGPGV
Trigger: CACTCCTGGACCACGGGGCCAGTGGCTGGGGAAGCT...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGCGGGAGCCTGCTTTaGGTGGGGGAAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCSGSLL*VGEGMG
Trigger: TCCCATCCCTTCCCCCACCCAAAGCAGGCTCCCGCT...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGCTGAGGCACCAGTCCTaGAACTGGCGGTACATGTCG +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMLRHQS*NWRYMS
Trigger: CGACATGTACCGCCAGTTCCAGGACTGGTGCCTCAG...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp GGAATAGGTCGAGAATTAAAAGCTTTCAGCCGCTCGGCTTCAACGCCGTCTGTCCAGTGGGTCCACTGCTaGAAGCATCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: GIGRELKAFSRSASTPSVQWVHC*KHHSDL
Trigger: TAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG...GACAGACGGCGTTGAAGCCGAGCGGCTGAAAGCTTTTAATTCTCGACCTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CAA 72 bp CCCCCTGAAGCAATTGAACTGTGCCCCAGAGTCTCATaGCCATTAAAGCTCTCTGCAGCAGAATCATCATCT +
Preference number: 4 (lower is better)
Translates to: PPEAIELCPRVS*PLKLSAAESSS
Trigger: AGATGATGATTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGCTTCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586314.5
3UTR CAA 72 bp GATTCTCGATATCCTGCAACAAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGCTGGGGTCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: DSRYPATSCLTA*ISVGLSWGLEF
Trigger: AAACTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCTTGTTGCAGGATATCGAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCATCCTGGGTCCTGCTTTaGCCTTCCCCACGACGGGTG +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSSWVLL*PSPRRV
Trigger: CACCCGTCGTGGGGAAGGTCAAAGCAGGACCCAGGA...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGCTGCTGGAGGATCCTaGGCTAGTCGCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMAAGGS*ASRQLS
Trigger: AGACAATTGGCGACTAGCTCAGGATCCTCCAGCAGC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGCTGCTGGAGGATCCTaGGCTAGTCGCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDAAGGS*ASRQLS
Trigger: AGACAATTGGCGACTAGCTCAGGATCCTCCAGCAGC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGGATGGTCAGTGGCTCCTaGTCGGCCAGGCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SLMCIPHYKIRKKGKVWGMVSGS*SARLSV
Trigger: CACACTCAGCCTGGCCGAGCAGGAGCCACTGACCAT...CCCCCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGTCCTCGCGCGGCGGCTaGGGCCGCTCCTCTTTATTC +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWSSRGG*GRSSLF
Trigger: GAATAAAGAGGAGCGGCCGCAGCCGCCGCGCGAGGA...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CATCATCTTGCTGGCCATGAAGATTCTGGGGACTTTGCATTCTTTCTTCAAGATGGAGCAGACTCATCCTaGTGTCTCTCCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: HHLAGHEDSGDFAFFLQDGADSS*CLSRRI
Trigger: GATGCGTCTGGAGAGACAGCAGGATGAGTCTGCTCC...ATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp TTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTACTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSGTLSSSLEIVSPLLLVLLHQI*HPTCSP
Trigger: TGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAG...TACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR GCA 90 bp CTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTTGCAGAAAGGTCTCCTaGATCAGATCTGCCATCCTA +
Preference number: 4 (lower is better)
Translates to: LFWHSEQLIRNRVTASLGCRKVS*IRSAIL
Trigger: TAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCA...ACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCGGAGGAGGGTCCGGTTaGGCACCAGCAATCAATGCC +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLGGGSG*APAINA
Trigger: GGCATTGATTGCTGGTGCCCAACCGGACCCTCCTCC...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTGGAGGAGGGTCCGGTTaGGCACCAGCAATCAATGCC +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSGGGSG*APAINA
Trigger: GGCATTGATTGCTGGTGCCCAACCGGACCCTCCTCC...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTCCGGCTGGCCCAGCTaGAAGCCCTTCGATTTGACC +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCSGWPS*KPFDLT
Trigger: GGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGGCCTGGGTCGCCTCTaGTTTACACTGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMGLGRL*FTLFVS
Trigger: GCTGACAAACAGTGTAAACCAGAGGCGACCCAGGCC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATCAGTTGGACTCAGCTaGGGTCTGGAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQSVGLS*GLEFEL
Trigger: CAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGA...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTCCCCTACGCCATCCGTaGCATGATGCAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLPLRHP*HDAERS
Trigger: AGACCTTTCTGCATCATGCCACGGATGGCGTAGGGG...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR CCA 90 bp GCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGAGGTTTTCCATTATCTTGAGGCTGAGATGCATTaGGCTCTCAATGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ACCSQSCWSPKWEVFHYLEAEMH*ALNASA
Trigger: GGCACTGGCATTGAGAGCCCAATGCATCTCAGCCTC...AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCATGATTGACTACAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAGCTCCCCAGCCCCACTaGCTTCTGCAGCGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEAPQPH*LLQREA
Trigger: AGCCTCACGCTGCAGAAGCCAGTGGGGCTGGGGAGC...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGTTCACCCTAGGCTCATaGAAAATGCAGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGFTLGS*KMQPRP
Trigger: TGGCCGGGGCTGCATTTTTCATGAGCCTAGGGTGAA...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR TCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCCGCCATCCGTGGTCTTaGCAGGCACGTAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCRHPWS*QARRAL
Trigger: AAGTGCTCTACGTGCCTGTCAAGACCACGGATGGCG...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAACTCACTCTCACAAGCTaGAGCCAAGATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQLTLTS*SQDTLC
Trigger: GCAGAGAGTATCTTGGCTTCAGCTTGTGAGAGTGAG...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQAVSRH*FQLDSA
Trigger: AGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGC...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTACGCCATCCGTGGCATaGTGCAGAAAGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSTPSVA*CRKVSC
Trigger: GCAGGAGACCTTTCTGCATCATGCCACGGATGGCGT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR GCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAATCCAGGAGTGAGGGCTaGGCCTCTCCCGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKSRSEG*ASPESS
Trigger: GCTGCTTTCGGGAGAGGCGCAGCCCTCACTCCTGGA...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGGGCACCAGCAATCAATaGCCCGTGCTACCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGGTSNQ*PVLPSL
Trigger: CAGACTTGGTAGCACGGGGCATTGATTGCTGGTGCC...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGSLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCGTTGCAGAAAGGTCTCCTaGATCAGATCTGCCATCCTA +
Preference number: 4 (lower is better)
Translates to: VSSLLSSVFPNLFSIWPRCRKVS*IRSAIL
Trigger: TAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCA...ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR GCA 90 bp TTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCAGCGTGAGGCTGAGATaGATTGGGCTCTCAATGCCA +
Preference number: 4 (lower is better)
Translates to: FVSSLLSSVFPNLFSIWPSVRLR*IGLSMP
Trigger: TGGCATTGAGAGCCCAATGCATCTCAGCCTCACGCT...GGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCAGCGGGAGCCTGCTTTaGGTGGGGGAAGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFSGSLL*VGEGMG
Trigger: TCCCATCCCTTCCCCCACCCAAAGCAGGCTCCCGCT...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATCCGGCTGGCCCAGCTaGAAGCCCTTCGATTTGACC +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLSGWPS*KPFDLT
Trigger: GGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGTGTAGTCAATCATGCTaGTCACCAAAGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VGHGNWHVVVNHAGHQSGCSQSC*SPKWEV
Trigger: AACCTCCCACTTTGGTGACCAGCATGATTGACTACA...CCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDLMLSK*PGSPLV
Trigger: AACCAGAGGCGACCCAGGCCACTTACTCAACATCAG...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TTTCATCCTCATCTTGCTGTGAGTTTAGCAGCTGCAGCTTCATGTGTTTCATGTCTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FHPHLAVSLAAAASCVSCLMLSK*PGSPLV
Trigger: AACCAGAGGCGACCCAGGCCACTTACTCAACATCAG...ACATGAAACACATGAAGCTGCAGCTGCTAAACTCACAGCAAGATGAGGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGACTCAGCTGGGGTCTaGAGTTTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGDSAGV*SLSCWR
Trigger: CCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTC...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCGACTCAGCTGGGGTCTaGAGTTTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCDSAGV*SLSCWR
Trigger: CCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTC...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TCACAAGCTGAAGCCAAGATACTCTCTGCAACTGCTGAAGTAAGGTGGGAAGGAACTGCTGAAGTAAGGTaGGAAGGAATAGGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: SQAEAKILSATAEVRWEGTAEVR*EGIGRE
Trigger: TTCTCGACCTATTCCTTCCCACCTTACTTCAGCAGT...TCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTCAGCTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACGTCTTGGTCTTGCCTaGGTCCCCGTAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRRLGLA*VPVSPE
Trigger: CTCAGGACTTACGGGGACTCAGGCAAGACCAAGACG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR TCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATCGACTCGGAGCCATTaGGGAGCTGGACGATCCGTT +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLSTRSH*GAGRSV
Trigger: AACGGATCGTCCAGCTCCTCAATGGCTCCGAGTCGA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTACGCCATCCGTGGTCTTaGCAGGCACGTAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVRHPWS*QARRAL
Trigger: AAGTGCTCTACGTGCCTGTCAAGACCACGGATGGCG...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATTCATCTTGCTGGCCATaGAGATTCTGGGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDSSCWP*RFWGLC
Trigger: GCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGA...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCTCACTCTCACAAGCTaGAGCCAAGATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDLTLTS*SQDTLC
Trigger: GCAGAGAGTATCTTGGCTTCAGCTTGTGAGAGTGAG...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGGGCTGCTGGAGGATCCTaGGCTAGTCGCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: SLMCIPHYKIRKKGKVWGAAGGS*ASRQLS
Trigger: AGACAATTGGCGACTAGCTCAGGATCCTCCAGCAGC...CCCCCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTGCTGCTGGAGGATCCTaGGCTAGTCGCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSAAGGS*ASRQLS
Trigger: AGACAATTGGCGACTAGCTCAGGATCCTCCAGCAGC...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMAVSRH*FQLDSA
Trigger: AGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GAACTTTCATCCTCATCTTGCTGTGAGTTTAGCAGCTGCAGCTTCATGTGTTTCGTTCCCATCTTCTTGTaGAGAAAATCGACGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ELSSSSCCEFSSCSFMCFVPIFL*RKSTLL
Trigger: CAGCAGCGTCGATTTTCTTCACAAGAAGATGGGAAC...GAAACACATGAAGCTGCAGCTGCTAAACTCACAGCAAGATGAGGATGAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp TCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGGTGTCTATTTTCCCCCTaGCACGTCATGGACACCCCC +
Preference number: 4 (lower is better)
Translates to: SLMCIPHYKIRKKGKVWGCLFSP*HVMDTP
Trigger: GGGGGTGTCCATGACGTGGCAGGGGGAAAATAGACA...CCCCCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGCAATCAATGCCCCGTaGTACCAAGTCTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMAINAP*YQVWSI
Trigger: AATGGACCAGACTTGGTAGCACGGGGCATTGATTGC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCGTGCTGCTAGAGGGATaGCTGGAGACAGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFVLLEG*LETAAA
Trigger: TGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCAC...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAACACCAGTCCTGGAACTaGCGGTACATGTCGCGCTCG +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEHQSWN*RYMSRS
Trigger: CGAGCGCGACATGTACCGCCAGTTCCAGGACTGGTG...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACTGAGGCACCAGTCCTaGAACTGGCGGTACATGTCG +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRLRHQS*NWRYMS
Trigger: CGACATGTACCGCCAGTTCCAGGACTGGTGCCTCAG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp CTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTTGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: LFWHSEQLIRNRVTASLGCWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...ACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CCA 90 bp CATCTCCCCTGTTTAGTGAGAGGTCCTCAGCTCCTCGGTCTACACTCTCATTTTGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: HLPCLVRGPQLLGLHSHFVGHGN*HVVVNH
Trigger: ATGATTGACTACAACATGCCAATTACCATGGCCTAC...AAAATGAGAGTGTAGACCGAGGAGCTGAGGACCTCTCACTAAACAGGGGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTCGTCATGGTCCTCGTaGTCATCTTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLSSWSS*SSSSSS
Trigger: AGATGAGGACGAAGATGACCACGAGGACCATGACGA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGGGCTGCTTAGAGATTaGGACCATTCGGTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDGLLRD*DHSVQV
Trigger: AACTTGGACCGAATGGTCCCAATCTCTAAGCAGCCC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATACACTGTTTGTCAGCTaGAGCAGACTCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDTLFVS*SRLILL
Trigger: CAGCAGGATGAGTCTGCTCCAGCTGACAAACAGTGT...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGGCCTGGGTCGCCTCTaGTTTACACTGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGGLGRL*FTLFVS
Trigger: GCTGACAAACAGTGTAAACCAGAGGCGACCCAGGCC...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAGACTCAGCTGGGGTCTaGAGTTTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSDSAGV*SLSCWR
Trigger: CCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTC...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGGCATTGATTTCAGTTaGACTCAGCTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMGIDFS*TQLGSG
Trigger: TCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCCCCCTACGCCATCCGTaGCATGATGCAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLPLRHP*HDAERS
Trigger: AGACCTTTCTGCATCATGCCACGGATGGCGTAGGGG...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR CCA 90 bp GCTTCTCATCTACCCCTACGCCATCATTCACATAAAAACTTGTATGCAATTGTAGAGGCTGAGATGCATTaGGCTCTCAATGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: ASHLPLRHHSHKNLYAIVEAEMH*ALNASA
Trigger: GGCACTGGCATTGAGAGCCCAATGCATCTCAGCCTC...TACAATTGCATACAAGTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR TCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAACGCCATCCGTGGTCTTaGCAGGCACGTAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKRHPWS*QARRAL
Trigger: AAGTGCTCTACGTGCCTGTCAAGACCACGGATGGCG...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGTCATCTTGCTGGCCATaGAGATTCTGGGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGSSCWP*RFWGLC
Trigger: GCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGA...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGAGGTTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: GHGNWHVVVNHAGHQSGRFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...CCTCCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAGCTGCTGGAGGATCCTaGGCTAGTCGCCAATTGTCT +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVAAGGS*ASRQLS
Trigger: AGACAATTGGCGACTAGCTCAGGATCCTCCAGCAGC...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTAAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: FSGTLSSSLEIVSPLLLVKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...TACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR TCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTACGCCATCCGTGGCATaGTGCAGAAAGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGTPSVA*CRKVSC
Trigger: GCAGGAGACCTTTCTGCATCATGCCACGGATGGCGT...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGACCCAGGGATTAGTCTaGCTTCCCCTAAATTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMTQGLV*LPLNSL
Trigger: GAGAGAATTTAGGGGAAGTCAGACTAATCCCTGGGT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS-3UTR GCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAGGCACCAGCAATCAATaGCCCGTGCTACCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLGTSNQ*PVLPSL
Trigger: CAGACTTGGTAGCACGGGGCATTGATTGCTGGTGCC...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp ATTCTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTTGTTGTAGTCAATCATaGTGGTCACCAAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILFWHSEQLIRNRVTASLCCSQS*WSPKWE
Trigger: CTCCCACTTTGGTGACCAGCATGATTGACTACAACA...AAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR GCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLSLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSSLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGSGCSS*SSPVLP
Trigger: TGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACT...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAGCTGGAGTAACTATGTaGAGGAGACTTGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQAGVTM*RRLASI
Trigger: AATGGAAGCAAGTCTCCTGCACATAGTTACTCCAGC...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAGGAGCAGACTCATCCTaGTGTCTCTCCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVGADSS*CLSRRI
Trigger: GATGCGTCTGGAGAGACAGCAGGATGAGTCTGCTCC...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGGAGCAGACTCATCCTaGTGTCTCTCCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQGADSS*CLSRRI
Trigger: GATGCGTCTGGAGAGACAGCAGGATGAGTCTGCTCC...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGGGAGCAGACTCATCCTaGTGTCTCTCCAGACGCATC +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQGADSS*CLSRRI
Trigger: GATGCGTCTGGAGAGACAGCAGGATGAGTCTGCTCC...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR GCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGATCAGTGGGTCCACTaGTGGAAGCATCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDDQWVH*WKHHSD
Trigger: ATCTGAATGATGCTTCCAGCAGTGGACCCACTGATC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCCTGACACTTGCAAAATaGTCAGTGGCTCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLLTLAK*SVAPAR
Trigger: CCGAGCAGGAGCCACTGACCATTTTGCAAGTGTCAG...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTATCCCAACACCATTCTaGCCCAGAGGAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSIPTPF*PRGAGF
Trigger: AAACCCAGCTCCTCTGGGCCAGAATGGTGTTGGGAT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCCGTGCTACCAAGTCTaGTCCATTCGTAATTGCAAC +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDPCYQV*SIRNCN
Trigger: GTTGCAATTACGAATGGACCAGACTTGGTAGCACGG...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGAGCCATTGAGGAGCTaGACGATCCGTTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLEPLRS*TIRSYF
Trigger: AAAATACGAACGGATCGTCCAGCTCCTCAATGGCTC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAATTTGGCGTTGTCCGTaGAGCTCGACTCGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLIWRCP*SSTRSH
Trigger: ATGGCTCCGAGTCGAGCTCCACGGACAACGCCAAAT...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTATTTGGCGTTGTCCGTaGAGCTCGACTCGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSIWRCP*SSTRSH
Trigger: ATGGCTCCGAGTCGAGCTCCACGGACAACGCCAAAT...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATTGCCAGAGTCATAGCTaGAGTAACTATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDCQSHS*SNYVQE
Trigger: CTCCTGCACATAGTTACTCCAGCTATGACTCTGGCA...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATACTGCTGAAGTAAGGTaGGAAGGAATAGGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDTAEVR*EGIGRD
Trigger: GTCTCGACCTATTCCTTCCCACCTTACTTCAGCAGT...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTGGCCTGGGTCGCCTCTaGTTTACACTGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSGLGRL*FTLFVS
Trigger: GCTGACAAACAGTGTAAACCAGAGGCGACCCAGGCC...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTGACTCAGCTGGGGTCTaGAGTTTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGDSAGV*SLSCWR
Trigger: CCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTC...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAGACTCAGCTGGGGTCTaGAGTTTGAGCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEDSAGV*SLSCWR
Trigger: CCTCCAGCAGCTCAAACTCCAGACCCCAGCTGAGTC...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTTCAGTTGGACTCAGCTaGGGTCTGGAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSSVGLS*GLEFEL
Trigger: CAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGA...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCACCCCCTCCACTGCTCTaGGTAGCCAAATATGAGTTC +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSPPPLL*VAKYEF
Trigger: GAACTCATATTTGGCTACTCAGAGCAGTGGAGGGGG...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGTTCACCCTAGGCTCATaGAAAATGCAGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWFTLGS*KMQPRP
Trigger: TGGCCGGGGCTGCATTTTTCATGAGCCTAGGGTGAA...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTTCTGGCACGCTCTTaGTACTCAGGGAATTGTCGC +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLFLARS*YSGNCR
Trigger: GCGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAA...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGATTTCTGGCACGCTCTTaGTACTCAGGGAATTGTCGC +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGFLARS*YSGNCR
Trigger: GCGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAA...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTCCGCCTGCAGGACTTaGGGTAAGTACGTATACGTT +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCSACRT*GKYVYV
Trigger: AACGTATACGTACTTACCTCAAGTCCTGCAGGCGGA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCCTCACTCTCACAAGCTaGAGCCAAGATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCLTLTS*SQDTLC
Trigger: GCAGAGAGTATCTTGGCTTCAGCTTGTGAGAGTGAG...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTATTGTCTCTTCATGCTaGGATCAGTGGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSIVSSC*DQWVHC
Trigger: GCAGTGGACCCACTGATCTCAGCATGAAGAGACAAT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCAVSRH*FQLDSA
Trigger: AGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGC...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ATAGCTTCTCATCTACCCCTACGCCATCATTCACATAAAAACTTGTATGCAATTGTATATCCCGTGGCATaGTGCAGAAAGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IASHLPLRHHSHKNLYAIVYPVA*CRKVSC
Trigger: GCAGGAGACCTTTCTGCATCATGCCACGGGATATAC...AATTGCATACAAGTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGAAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR GCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGCTGGTCCTGACACTTaGAAAATGGTCAGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQAGPDT*KMVSGS
Trigger: GGAGCCACTGACCATTTTGCAAGTGTCAGGACCAGC...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTTGGTCCATTCGTAATTaGAACGGCTGTCTCGGACGT +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSWSIRN*NGCLGR
Trigger: ACGTCCGAGACAGCCGTTGCAATTACGAATGGACCA...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTGTTGTAGTCAATCATaGTGGTCACCAAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLCCSQS*WSPKWE
Trigger: CTCCCACTTTGGTGACCAGCATGATTGACTACAACA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGAGTTTAGCAGCTaGAGCTTCATGTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQCEFSS*SFMCFM
Trigger: CATGAAACACATGAAGCTGCAGCTGCTAAACTCACA...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ATTCTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTTGTGAGTTTAGCAGCTaGAGCTTCATGTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: ILFWHSEQLIRNRVTASLCEFSS*SFMCFM
Trigger: CATGAAACACATGAAGCTGCAGCTGCTAAACTCACA...AAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR GCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCTTTCATCCTCATCTTaGTGTGAGTTTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDLSSSS*CEFSSC
Trigger: GCAGCTGCTAAACTCACAGCAAGATGAGGATGAAAG...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CATCATCTTGCTGGCCATGAAGATTCTGGGGACTTTGCATTCTTTCTTCAAGATCTTTCATCCTCATCTTaGTGTGAGTTTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HHLAGHEDSGDFAFFLQDLSSSS*CEFSSC
Trigger: GCAGCTGCTAAACTCACAGCAAGATGAGGATGAAAG...ATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFSLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR GCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAAGTCTCCCATCTCCCTaGTGTGTGTTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKSLPSP*CVFPLK
Trigger: CTTCAGGGGGAACACACAGCAGGGAGATGGGAGACT...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLSGCSS*SSPVLP
Trigger: TGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACT...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCSGCSS*SSPVLP
Trigger: TGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACT...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGCTGGAGTAACTATGTaGAGGAGACTTGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMAGVTM*RRLASI
Trigger: AATGGAAGCAAGTCTCCTGCACATAGTTACTCCAGC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAACTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQLHSHF*QSHSWS
Trigger: ACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAG...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGACTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGLLHQI*HPTCSP
Trigger: TGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAG...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR CCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGTTGCAAAATGGTCAGTaGCTCCTGCTCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWLQNGQ*LLLGQA
Trigger: AGCCTGGCCGAGCAGGAGCCACTGACCATTTTGCAA...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGTGTAGTCAATCATGCTaGTCACCAAAGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMCSQSC*SPKWEV
Trigger: AACCTCCCACTTTGGTGACCAGCATGATTGACTACA...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTGTAGTCAATCATGCTaGTCACCAAAGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLCSQSC*SPKWEV
Trigger: AACCTCCCACTTTGGTGACCAGCATGATTGACTACA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGTGCCAGAGTCATAGCTaGAGTAACTATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGCQSHS*SNYVQE
Trigger: CTCCTGCACATAGTTACTCCAGCTATGACTCTGGCA...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGATCGTCATGGTCCTCGTaGTCATCTTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGSSWSS*SSSSSS
Trigger: AGATGAGGACGAAGATGACCACGAGGACCATGACGA...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGATTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATACGTATACGTTTTCTaGCACGCTCTTGATACTCAG +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQYVYVF*HALDTQ
Trigger: CTGAGTATCAAGAGCGTGCCAGAAAACGTATACGTA...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGCCTGGGTCGCCTCTaGTTTACACTGTTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWGLGRL*FTLFVS
Trigger: GCTGACAAACAGTGTAAACCAGAGGCGACCCAGGCC...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTCTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSLMLSK*PGSPLV
Trigger: AACCAGAGGCGACCCAGGCCACTTACTCAACATCAG...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSLMLSK*PGSPLV
Trigger: AACCAGAGGCGACCCAGGCCACTTACTCAACATCAG...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCACTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSLMLSK*PGSPLV
Trigger: AACCAGAGGCGACCCAGGCCACTTACTCAACATCAG...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCATCAGTTGGACTCAGCTaGGGTCTGGAGTTTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSSVGLS*GLEFEL
Trigger: CAGCTCAAACTCCAGACCCCAGCTGAGTCCAACTGA...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGGGGCATTGATTTCAGTTaGACTCAGCTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLMCIPHYKIRKKGKVWGGIDFS*TQLGSG
Trigger: TCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCC...CCCCCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCGGCATTGATTTCAGTTaGACTCAGCTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCGIDFS*TQLGSG
Trigger: TCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCC...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCGGCATTGATTTCAGTTaGACTCAGCTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLGIDFS*TQLGSG
Trigger: TCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCC...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGGCATAGCTCTCTGAAATTGCTTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCTTGTGGTATATCCCGTaGCATGATGCAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RHSSLKLLCKFSFVQRVSLWYIP*HDAERS
Trigger: AGACCTTTCTGCATCATGCCACGGGATATACCACAA...GGAAACACGCTGGACAAAAGAGAACTTACAAAGCAATTTCAGAGAGCTATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR TCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTTTTCTGGCACGCTCTTaGTACTCAGGGAATTGTCGC +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSFLARS*YSGNCR
Trigger: GCGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAA...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGATCCGCCTGCAGGACTTaGGGTAAGTACGTATACGTT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRSACRT*GKYVYV
Trigger: AACGTATACGTACTTACCTCAAGTCCTGCAGGCGGA...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTACTCTCTGCAACTGCTaGAGTAAGGTGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSTLCNC*SKVGRN
Trigger: ATTCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGATTGTCTCTTCATGCTaGGATCAGTGGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQIVSSC*DQWVHC
Trigger: GCAGTGGACCCACTGATCTCAGCATGAAGAGACAAT...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSAVSRH*FQLDSA
Trigger: AGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGC...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAGCTGTCTCACGGCATTaGTTTCAGTTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLAVSRH*FQLDSA
Trigger: AGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGC...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGGCAATCAATGCCCCGTaGTACCAAGTCTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQAINAP*YQVWSI
Trigger: AATGGACCAGACTTGGTAGCACGGGGCATTGATTGC...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR GCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGCTTTCATCCTCATCTTaGTGTGAGTTTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGLSSSS*CEFSSC
Trigger: GCAGCTGCTAAACTCACAGCAAGATGAGGATGAAAG...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGCCATTAAAGCTCTCTaGAGCAGAATCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMAIKAL*SRIIIL
Trigger: CAAGATGATGATTCTGCTGCAGAGAGCTTTAATGGC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSSGCSS*SSPVLP
Trigger: TGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACT...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTAGTGGCTGTTCATCTTaGTCCAGCCCAGTTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSSGCSS*SSPVLP
Trigger: TGGCAAAACTGGGCTGGAGCAAGATGAACAGCCACT...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATATTCCGAAGTTAGCTaGGCAGAGAGGGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLYSEVS*AERGLS
Trigger: TGACAGTCCCCTCTCTGCGCAGCTAACTTCGGAATA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGATATTCCGAAGTTAGCTaGGCAGAGAGGGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRYSEVS*AERGLS
Trigger: TGACAGTCCCCTCTCTGCGCAGCTAACTTCGGAATA...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTCTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLLHSHF*QSHSWS
Trigger: ACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAG...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCGATCAGTGGGTCCACTaGTGGAAGCATCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLDQWVH*WKHHSD
Trigger: ATCTGAATGATGCTTCCAGCAGTGGACCCACTGATC...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTGATCAGTGGGTCCACTaGTGGAAGCATCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSDQWVH*WKHHSD
Trigger: ATCTGAATGATGCTTCCAGCAGTGGACCCACTGATC...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRLLHQI*HPTCSP
Trigger: TGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR GCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTGCAGAAAGGTCTCCTaGATCAGATCTGCCATCCTA +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLCRKVS*IRSAIL
Trigger: TAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCA...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538587.5
ENST00000586314.5
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAAATATTGAATTGGGGTaGTCCCTAGACGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSENIELG*SLDASP
Trigger: GGGCGAGGCGTCTAGGGACCACCCCAATTCAATATT...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLCWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTTGCCAGAGTCATAGCTaGAGTAACTATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSCQSHS*SNYVQE
Trigger: CTCCTGCACATAGTTACTCCAGCTATGACTCTGGCA...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTTCGTCATGGTCCTCGTaGTCATCTTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSSSWSS*SSSSSS
Trigger: AGATGAGGACGAAGATGACCACGAGGACCATGACGA...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAATTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTGGGCTGCTTAGAGATTaGGACCATTCGGTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSGLLRD*DHSVQV
Trigger: AACTTGGACCGAATGGTCCCAATCTCTAAGCAGCCC...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTACTGCTGAAGTAAGGTaGGAAGGAATAGGTCGAGAC +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSTAEVR*EGIGRD
Trigger: GTCTCGACCTATTCCTTCCCACCTTACTTCAGCAGT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAACACTGTTTGTCAGCTaGAGCAGACTCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVTLFVS*SRLILL
Trigger: CAGCAGGATGAGTCTGCTCCAGCTGACAAACAGTGT...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAACACTGTTTGTCAGCTaGAGCAGACTCATCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLTLFVS*SRLILL
Trigger: CAGCAGGATGAGTCTGCTCCAGCTGACAAACAGTGT...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAACTGATGTTGAGTAAGTaGCCTGGGTCGCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKLMLSK*PGSPLV
Trigger: AACCAGAGGCGACCCAGGCCACTTACTCAACATCAG...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAACACTGTTTGTCAGCTaGAGCAGACTCATCATTAAA +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQTLFVS*SRLIIK
Trigger: TTTAATGATGAGTCTGCTCCAGCTGACAAACAGTGT...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589544.5
CDS-3UTR TCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGGCATAGCTCTCTaGAATTGCTTTGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMEGIAL*NCFVSS
Trigger: AGAACTTACAAAGCAATTTCAGAGAGCTATGCCTTC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGAAGGCATAGCTCTCTaGAATTGCTTTGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLEGIAL*NCFVSS
Trigger: AGAACTTACAAAGCAATTTCAGAGAGCTATGCCTTC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATCATCTTGCTGGCCATaGAGATTCTGGGGACTTTGC +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSESSCWP*RFWGLC
Trigger: GCAAAGTCCCCAGAATCTTCATGGCCAGCAAGATGA...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAGAATTGTCGCCTGCATaGGTCAATGATAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSELSPA*VNDSLD
Trigger: ATCCAGGCTATCATTGACTCATGCAGGCGACAATTC...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAGAATTGTCGCCTGCATaGGTCAATGATAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRELSPA*VNDSLD
Trigger: ATCCAGGCTATCATTGACTCATGCAGGCGACAATTC...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAACTCTCTGCAACTGCTaGAGTAAGGTGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRTLCNC*SKVGRN
Trigger: ATTCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGT...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAACTCACTCTCACAAGCTaGAGCCAAGATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSELTLTS*SQDTLC
Trigger: GCAGAGAGTATCTTGGCTTCAGCTTGTGAGAGTGAG...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAACTCACTCTCACAAGCTaGAGCCAAGATACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKLTLTS*SQDTLC
Trigger: GCAGAGAGTATCTTGGCTTCAGCTTGTGAGAGTGAG...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAATTGTCTCTTCATGCTaGGATCAGTGGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKIVSSC*DQWVHC
Trigger: GCAGTGGACCCACTGATCTCAGCATGAAGAGACAAT...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCATTGTCTCTTCATGCTaGGATCAGTGGGTCCACTGC +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFIVSSC*DQWVHC
Trigger: GCAGTGGACCCACTGATCTCAGCATGAAGAGACAAT...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGCAGCAGAATCATTGTaGATTCTGCTCTTCAACTTA +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLAAESL*ILLFNL
Trigger: TAAGTTGAAGAGCAGAATTCACAATGATTCTGCTGC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS-3UTR GCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGATGCTTGGTCACAGTTTaGAGTTCACACGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRCLVTV*SSHGRF
Trigger: AAACCTCCCGTGTGAACTGCAAACTGTGACCAAGCA...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTATTCCGAAGTTAGCTaGGCAGAGAGGGGACTGTCA +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGYSEVS*AERGLS
Trigger: TGACAGTCCCCTCTCTGCGCAGCTAACTTCGGAATA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGATCTTTTCTTTGGGCTaGTTAGAGATTGGGACCATT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMIFSLG*LEIGTI
Trigger: AATGGTCCCAATCTCTAAGCAGCCCAAAGAAAAGAT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR GCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGATCAGTGGGTCCACTaGTGGAAGCATCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSDQWVH*WKHHSD
Trigger: ATCTGAATGATGCTTCCAGCAGTGGACCCACTGATC...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAGAGCCATTGAGGAGCTaGACGATCCGTTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSEPLRS*TIRSYF
Trigger: AAAATACGAACGGATCGTCCAGCTCCTCAATGGCTC...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGTGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGCWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDVGHGN*HVVVNH
Trigger: ATGATTGACTACAACATGCCAATTACCATGGCCTAC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCGTCACTCAGGTTCAGTaGCTGTTCATCTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFVTQVQ*LFILLQ
Trigger: CTGGAGCAAGATGAACAGCCACTGAACCTGAGTGAC...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCATGCCAGAGTCATAGCTaGAGTAACTATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSCQSHS*SNYVQE
Trigger: CTCCTGCACATAGTTACTCCAGCTATGACTCTGGCA...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAATGCCAGAGTCATAGCTaGAGTAACTATGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQCQSHS*SNYVQE
Trigger: CTCCTGCACATAGTTACTCCAGCTATGACTCTGGCA...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATCGTCATGGTCCTCGTaGTCATCTTCGTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSESSWSS*SSSSSS
Trigger: AGATGAGGACGAAGATGACCACGAGGACCATGACGA...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAATTCTCCGAATCGTCATaGTCCTCGTGGTCATCTTCG +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKFSESS*SSWSSS
Trigger: CGAAGATGACCACGAGGACCATGACGATTCGGAGAA...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTGGGCTGCTTAGAGATTaGGACCATTCGGTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGGLLRD*DHSVQV
Trigger: AACTTGGACCGAATGGTCCCAATCTCTAAGCAGCCC...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTCAGTGGGTCCACTGCTaGAAGCATCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSQWVHC*KHHSDL
Trigger: TAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCCAGTGGGTCCACTGCTaGAAGCATCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCQWVHC*KHHSDL
Trigger: TAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTGGCATTGATTTCAGTTaGACTCAGCTGGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGGIDFS*TQLGSG
Trigger: TCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCC...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAACTCTCTGCAACTGCTaGAGTAAGGTGGGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKTLCNC*SKVGRN
Trigger: ATTCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGT...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCGTTGAGTGGGGTTTTTaGGATCAGCATGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFVEWGF*DQHESR
Trigger: TCTGCTCTCATGCTGATCTCAAAAACCCCACTCAAC...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGATGCAGCTGCATCCGCTaGGAGTTCCTTACATTATTT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRCSCIR*EFLTLF
Trigger: AAATAATGTAAGGAACTCTCAGCGGATGCAGCTGCA...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGAAGGCATAGCTCTCTaGAATCTGTATTTGAAACTT +
Preference number: 4 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLEGIAL*NLYLKL
Trigger: AAGTTTCAAATACAGATTTCAGAGAGCTATGCCTTC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR GCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGATCATTTTCCCCTTaGTTGGTCACAGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCRSFSP*LVTVCS
Trigger: ACTGCAAACTGTGACCAAGCAAGGGGAAAATGATCT...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTTGTTGTAGTCAATCATaGTGGTCACCAAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSCCSQS*WSPKWE
Trigger: CTCCCACTTTGGTGACCAGCATGATTGACTACAACA...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGATGTGAGTTTAGCAGCTaGAGCTTCATGTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGCEFSS*SFMCFM
Trigger: CATGAAACACATGAAGCTGCAGCTGCTAAACTCACA...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTACTTTCATCCTCATCTTaGTGTGAGTTTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVLSSSS*CEFSSC
Trigger: GCAGCTGCTAAACTCACAGCAAGATGAGGATGAAAG...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGCCATTAAAGCTCTCTaGAGCAGAATCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGAIKAL*SRIIIL
Trigger: CAAGATGATGATTCTGCTGCAGAGAGCTTTAATGGC...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCGCCATTAAAGCTCTCTaGAGCAGAATCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCAIKAL*SRIIIL
Trigger: CAAGATGATGATTCTGCTGCAGAGAGCTTTAATGGC...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCGCCATTAAAGCTCTCTaGAGCAGAATCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLAIKAL*SRIIIL
Trigger: CAAGATGATGATTCTGCTGCAGAGAGCTTTAATGGC...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGCTGGAGTAACTATGTaGAGGAGACTTGCTTCCATT +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQAGVTM*RRLASI
Trigger: AATGGAAGCAAGTCTCCTGCACATAGTTACTCCAGC...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCCTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLLHSHF*QSHSWS
Trigger: ACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAG...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGACTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGLHSHF*QSHSWS
Trigger: ACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAG...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGATCAGTGGGTCCACTaGTGGAAGCATCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKDQWVH*WKHHSD
Trigger: ATCTGAATGATGCTTCCAGCAGTGGACCCACTGATC...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTGATCAGTGGGTCCACTaGTGGAAGCATCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGDQWVH*WKHHSD
Trigger: ATCTGAATGATGCTTCCAGCAGTGGACCCACTGATC...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCCAGACAGGACTCCTCTaGTTTCTGCTGAACAAGACA +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFQTGLL*FLLNKT
Trigger: TGTCTTGTTCAGCAGAAACCAGAGGAGTCCTGTCTG...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCGAGCCATTGAGGAGCTaGACGATCCGTTCGTATTTT +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFEPLRS*TIRSYF
Trigger: AAAATACGAACGGATCGTCCAGCTCCTCAATGGCTC...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CCA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGATGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGCWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTTGTAGTCAATCATGCTaGTCACCAAAGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSCSQSC*SPKWEV
Trigger: AACCTCCCACTTTGGTGACCAGCATGATTGACTACA...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATATGGGAGTGTGGAAAACCTCTTCCTGTCTTGATTTTTCCTGAAGAGTATGTGGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: IWECGKPLPVLIFPEEYVVGHGN*HVVVNH
Trigger: ATGATTGACTACAACATGCCAATTACCATGGCCTAC...CACATACTCTTCAGGAAAAATCAAGACAGGAAGAGGTTTTCCACACTCCCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591917.5
CDS-3UTR CCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAGAGTCAATGATAGCCTaGATCTTTTCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRESMIA*IFSLGC
Trigger: GCAGCCCAAAGAAAAGATCCAGGCTATCATTGACTC...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTGAGTCAATGATAGCCTaGATCTTTTCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSESMIA*IFSLGC
Trigger: GCAGCCCAAAGAAAAGATCCAGGCTATCATTGACTC...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGGAGTCAATGATAGCCTaGATCTTTTCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQESMIA*IFSLGC
Trigger: GCAGCCCAAAGAAAAGATCCAGGCTATCATTGACTC...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTACAGTGGGTCCACTGCTaGAAGCATCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVQWVHC*KHHSDL
Trigger: TAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ACATCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGAAGAAGGGTAAAGTATaGGGGATAGGAGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: TSLMCIPHYKIRKKGKVWKKGKV*GIGGHS
Trigger: ACTGTGCCCTCCTATCCCCCATACTTTACCCTTCTT...CCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTACTGCTGAAGTAAGGTaGGAAGGAATAGGTCGAGAA +
Preference number: 4 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSTAEVR*EGIGRE
Trigger: TTCTCGACCTATTCCTTCCCACCTTACTTCAGCAGT...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGTCTTCAGATGCATTTTaGATAAATTCCAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: GSISLKRLCSKTRSISVGSSDAF*INSSPV
Trigger: TACAGGGCTGGAATTTATTCAAAATGCATCTGAAGA...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp AAGATAGCTTCTCATCTACCCCTACGCCATCATTCACATAAAAACTTGTATGCAGAAGGCATAGCTCTCTaGAATTGCTTTGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KIASHLPLRHHSHKNLYAEGIAL*NCFVSS
Trigger: AGAACTTACAAAGCAATTTCAGAGAGCTATGCCTTC...TGCATACAAGTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGAAGCTATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR TCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTCCTCTCGTTCCATCTTaGGGTCAGAAATTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSPLVPS*GQKLED
Trigger: ATCTTCTAATTTCTGACCTCAAGATGGAACGAGAGG...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTAAATTTAGACCTCAGTaGATATGGTGGTCGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSKFRPQ*IWWSSV
Trigger: GACAGACGACCACCATATTCACTGAGGTCTAAATTT...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTAGGTCAGAGTTCCTTTaGAGCACCTTAACACATCAC +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGRSEFL*STLTHH
Trigger: GTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCT...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAATGTTGTAGTCAATCATaGTGGTCACCAAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKCCSQS*WSPKWE
Trigger: CTCCCACTTTGGTGACCAGCATGATTGACTACAACA...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAGCCATTAAAGCTCTCTaGAGCAGAATCATCATCTTG +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVAIKAL*SRIIIL
Trigger: CAAGATGATGATTCTGCTGCAGAGAGCTTTAATGGC...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTGTAGTCAATCATGCTaGTCACCAAAGTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGCSQSC*SPKWEV
Trigger: AACCTCCCACTTTGGTGACCAGCATGATTGACTACA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTTACGTATACGTTTTCTaGCACGCTCTTGATACTCAG +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSYVYVF*HALDTQ
Trigger: CTGAGTATCAAGAGCGTGCCAGAAAACGTATACGTA...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCCAGTGGGTCCACTGCTaGAAGCATCATTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFQWVHC*KHHSDL
Trigger: TAAATCTGAATGATGCTTCCAGCAGTGGACCCACTG...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CCA 90 bp TTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCCTTCAACAAGTAAATaGGTAAATTGTGGTATATCC +
Preference number: 4 (lower is better)
Translates to: FVSSLLSSVFPNLFSIWPPSTSK*VNCGIS
Trigger: GGATATACCACAATTTACCCATTTACTTGTTGAAGG...GGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
3UTR CAA 72 bp TCTCATCTACCCCTACGCCATCATTCACATAAAAACTaGTATGCAATTGTAGCAGCTCTATTCATAATTGCC +
Preference number: 4 (lower is better)
Translates to: SHLPLRHHSHKN*YAIVAALFIIA
Trigger: GGCAATTATGAATAGAGCTGCTACAATTGCATACAAGTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR TCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCTCCTCTGGTTTCTGCTaGACAAGACATAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFSSGFC*TRHRSK
Trigger: CTTACTTCTATGTCTTGTTCAGCAGAAACCAGAGGA...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp TCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGGAAATTAGCAAAGCATTaGTGGAGATTTGGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SLMCIPHYKIRKKGKVWGKLAKH*WRFGHS
Trigger: ACTATGGCCAAATCTCCATCAATGCTTTGCTAATTT...CCCCCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR TCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAGAAGGCATAGCTCTCTaGAATTGCTTTGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLEGIAL*NCFVSS
Trigger: AGAACTTACAAAGCAATTTCAGAGAGCTATGCCTTC...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTTTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTCCTCTCGTTCCATCTTaGGGTCAGAAATTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGPLVPS*GQKLED
Trigger: ATCTTCTAATTTCTGACCTCAAGATGGAACGAGAGG...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAACCTCTCGTTCCATCTTaGGGTCAGAAATTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKPLVPS*GQKLED
Trigger: ATCTTCTAATTTCTGACCTCAAGATGGAACGAGAGG...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAACCTCTCGTTCCATCTTaGGGTCAGAAATTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEPLVPS*GQKLED
Trigger: ATCTTCTAATTTCTGACCTCAAGATGGAACGAGAGG...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAGTTTAGGATACAGATaGTTGAAAACCTTTGCACGA +
Preference number: 4 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSSLGYR*LKTFAR
Trigger: TCGTGCAAAGGTTTTCAAGCATCTGTATCCTAAACT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTGTGAGTTTAGCAGCTaGAGCTTCATGTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGCEFSS*SFMCFM
Trigger: CATGAAACACATGAAGCTGCAGCTGCTAAACTCACA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAACTACACTCTCATTTTTaGCAGAGTCATAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSELHSHF*QSHSWS
Trigger: ACTCCAGCTATGACTCTGGCAAAAATGAGAGTGTAG...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCTGCTGGTCACCAAAGTaGGAGGTTTTCCATTATCTT +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFCWSPK*EVFHYL
Trigger: AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCA...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CCA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQVGHGN*HVVVNH
Trigger: ATGATTGACTACAACATGCCAATTACCATGGCCTAC...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAATACGTATACGTTTTCTaGCACGCTCTTGATACTCAG +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKYVYVF*HALDTQ
Trigger: CTGAGTATCAAGAGCGTGCCAGAAAACGTATACGTA...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR TCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTGAAGGCATAGCTCTCTaGAATTGCTTTGTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGEGIAL*NCFVSS
Trigger: AGAACTTACAAAGCAATTTCAGAGAGCTATGCCTTC...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTATTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR TCA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTATCTTTTCTTTGGGCTaGTTAGAGATTGGGACCATT +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGIFSLG*LEIGTI
Trigger: AATGGTCCCAATCTCTAAGCAGCCCAAAGAAAAGAT...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR GCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAATCTTTTCTTTGGGCTaGTTAGAGATTGGGACCATT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEIFSLG*LEIGTI
Trigger: AATGGTCCCAATCTCTAAGCAGCCCAAAGAAAAGAT...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR GCA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTTTCAGATTGTCACTTaGAACCTCTTAACATTCAGT +
Preference number: 4 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCFQIVT*NLLTFS
Trigger: ACTGAATGTTAAGAGGTTGCAAGTGACAATCTGAAA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAGCCATTAAAGCTCTCTaGAGCAGAATCATTGTGAAT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEAIKAL*SRIIVN
Trigger: ATTCACAATGATTCTGCTGCAGAGAGCTTTAATGGC...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS-3UTR CCA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFVGHGN*HVVVNH
Trigger: ATGATTGACTACAACATGCCAATTACCATGGCCTAC...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CCA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAGTAGGCCATGGTAATTaGCATGTTGTAGTCAATCAT +
Preference number: 4 (lower is better)
Translates to: CWEIKMSLVETANLDLSEVGHGN*HVVVNH
Trigger: ATGATTGACTACAACATGCCAATTACCATGGCCTAC...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CCA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGAAATACCAATGTCTGTaGCAGGCCAATTCTATCATT +
Preference number: 4 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQKYQCL*QANSII
Trigger: AATGATAGAATTGGCCTGCCACAGACATTGGTATTT...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS-3UTR TCA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTTCCCATTACTGTTGTaGTCATCTATTCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: IKMSLVETANLDLSEYGGFPLLL*SSILYS
Trigger: GGAATACAGAATAGATGATCACAACAGTAATGGGAA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR GCA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAACTACACACAAGAGTaGAAATTTTCAGATTGTCAC +
Preference number: 4 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVNYTQE*KFSDCH
Trigger: GTGACAATCTGAAAATTTGCACTCTTGTGTGTAGTT...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR GCA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTAGTTACAAGAAAAAGTaGACATTACTCGGTCACAAT +
Preference number: 4 (lower is better)
Translates to: LCWEIKMSLVETANLDLSSYKKK*TLLGHN
Trigger: ATTGTGACCGAGTAATGTGCACTTTTTCTTGTAACT...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CCA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGGATCAAGGACAATGTaGCATAATGGAAGTATTTCT +
Preference number: 4 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKGSRTM*HNGSIS
Trigger: AGAAATACTTCCATTATGCCACATTGTCCTTGATCC...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS GCA 90 bp ATTCTACTCTCACCCGAGGCCCGCGCCCGTCCCGGGGAGCGGCTCTaGCAGGAAAACGGCCCGACCAGTGCCCGGCGCCTGGGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: ILLSPEARARPGERL*QENGPTSARRLGCV
Trigger: GACGCAGCCCAGGCGCCGGGCACTGGTCGGGCCGTTTTCCTGGCAGAGCCGCTCCCCGGGACGGGCGCGGGCCTCGGGTGAGAGTAGAAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 90 bp CAGAAGCTTCCCCAGCCACTGGCCCCGTGGTCCAGGAGTGAGGGCTaGGCCTCTCCCGAAAGCAGCCGCCCGCCCAGCGCCTTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: QKLPQPLAPWSRSEG*ASPESSRPPSAFEP
Trigger: GGGCTCAAAGGCGCTGGGCGGGCGGCTGCTTTCGGGAGAGGCGCAGCCCTCACTCCTGGACCACGGGGCCAGTGGCTGGGGAAGCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CCA 90 bp GGGAGCGGCTCTGCCAGGAAAACGGCCCGACCAGTGCCCGGCGCCTaGGCTGCGTCCGAGCCCACCTTCTTCCCTCGTCGTCGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: GSGSARKTARPVPGA*AASEPTFFPRRRLP
Trigger: TGGGAGACGACGACGAGGGAAGAAGGTGGGCTCGGACGCAGCCCAGGCGCCGGGCACTGGTCGGGCCGTTTTCCTGGCAGAGCCGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 90 bp CGGCTCTGCCAGGAAAACGGCCCGACCAGTGCCCGGCGCCTGGGCTaGGTCCGAGCCCACCTTCTTCCCTCGTCGTCGTCTCCCAGACTA +
Preference number: 5 (lower is better)
Translates to: RLCQENGPTSARRLG*VRAHLLPSSSSPRL
Trigger: TAGTCTGGGAGACGACGACGAGGGAAGAAGGTGGGCTCGGACGCAGCCCAGGCGCCGGGCACTGGTCGGGCCGTTTTCCTGGCAGAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 90 bp CTGCGGCTCCCCAGCCCCACTGGCTTCTGCAGCGTGAGGCTGAGATaGATTGGGCTCTCAATGCCAGTGCCTCGCGGCGCCTGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: LRLPSPTGFCSVRLR*IGLSMPVPRGAWAR
Trigger: TCTAGCCCAGGCGCCGCGAGGCACTGGCATTGAGAGCCCAATGCATCTCAGCCTCACGCTGCAGAAGCCAGTGGGGCTGGGGAGCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586309.1
ENST00000586314.5
ENST00000587971.5
CDS CCA 90 bp TTGGCGCCGCCGCCTCCCCCGCGGACCTCGTCCGGCTGGCCCAGCTaGAAGCCCTTCGATTTGACCCAGAATTTAAATTTGGCGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LAPPPPPRTSSGWPS*KPFDLTQNLNLALS
Trigger: GGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGACGAGGTCCGCGGGGGAGGCGGCGGCGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CCA 90 bp AGCACTTGCTTGGCGCCGCCGCCTCCCCCGCGGACCTCGTCCGGCTaGCCCAGCTGGAAGCCCTTCGATTTGACCCAGAATTTAAATTTG +
Preference number: 5 (lower is better)
Translates to: STCLAPPPPPRTSSG*PSWKPFDLTQNLNL
Trigger: CAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGACGAGGTCCGCGGGGGAGGCGGCGGCGCCAAGCAAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS GCA 90 bp CGCGCTGTAGCTGGTCCTGACACTTGCAAAATGGTCAGTGGCTCCTaGTCGGCCAGGCTGAGTGTGTGCGTGTGTGTGAGCAAGGGAGCG +
Preference number: 5 (lower is better)
Translates to: RAVAGPDTCKMVSGS*SARLSVCVCVSKGA
Trigger: CGCTCCCTTGCTCACACACACGCACACACTCAGCCTGGCCGAGCAGGAGCCACTGACCATTTTGCAAGTGTCAGGACCAGCTACAGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS TCA 90 bp AAAGGGAAAGCGGGATGTTTGCGCCCACCGCGCTGTAGCTGGTCCTaGCACTTGCAAAATGGTCAGTGGCTCCTGCTCGGCCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KGKAGCLRPPRCSWS*HLQNGQWLLLGQAE
Trigger: CTCAGCCTGGCCGAGCAGGAGCCACTGACCATTTTGCAAGTGTCAGGACCAGCTACAGCGCGGTGGGCGCAAACATCCCGCTTTCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS GCA 90 bp AAGAGGGGAGGAGGGTCCGGTTGGGCACCAGCAATCAATGCCCCGTaGTACCAAGTCTGGTCCATTCGTAATTGCAACGGCTGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: KRGGGSGWAPAINAP*YQVWSIRNCNGCLG
Trigger: TCCGAGACAGCCGTTGCAATTACGAATGGACCAGACTTGGTAGCACGGGGCATTGATTGCTGGTGCCCAACCGGACCCTCCTCCCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 90 bp TCGTCGTCTCCCAGACTAAATCCCGGAAAGGGAAAGCGGGATGTTTaGGCCCACCGCGCTGTAGCTGGTCCTGACACTTGCAAAATGGTC +
Preference number: 5 (lower is better)
Translates to: SSSPRLNPGKGKRDV*AHRAVAGPDTCKMV
Trigger: GACCATTTTGCAAGTGTCAGGACCAGCTACAGCGCGGTGGGCGCAAACATCCCGCTTTCCCTTTCCGGGATTTAGTCTGGGAGACGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS CCA 90 bp GGGTCCGGTTGGGCACCAGCAATCAATGCCCCGTGCTACCAAGTCTaGTCCATTCGTAATTGCAACGGCTGTCTCGGACGTTTTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GSGWAPAINAPCYQV*SIRNCNGCLGRFSC
Trigger: ACAGGAAAAACGTCCGAGACAGCCGTTGCAATTACGAATGGACCAGACTTGGTAGCACGGGGCATTGATTGCTGGTGCCCAACCGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATGCCCGCCCAGCGCCTTaGAGCCCCGAAGGGCACACG +
Preference number: 5 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDARPAP*SPEGHT
Trigger: CGTGTGCCCTTCGGGGCTCAAAGGCGCTGGGCGGGC...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 90 bp CCAGCAATCAATGCCCCGTGCTACCAAGTCTGGTCCATTCGTAATTaGAACGGCTGTCTCGGACGTTTTTCCTGTTCCCTTAGCGGTCGG +
Preference number: 5 (lower is better)
Translates to: PAINAPCYQVWSIRN*NGCLGRFSCSLSGR
Trigger: CCGACCGCTAAGGGAACAGGAAAAACGTCCGAGACAGCCGTTGCAATTACGAATGGACCAGACTTGGTAGCACGGGGCATTGATTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp AGTCATCTACATCCAGGTGCTGCTAGAGGGATGCCTGGAGACAGCAGCGGCAATAATCCCAATATTGAATaGGGGTGGTCCCTAGACGCC +
Preference number: 5 (lower is better)
Translates to: SHLHPGAARGMPGDSSGNNPNIE*GWSLDA
Trigger: GGCGTCTAGGGACCACCCCAATTCAATATTGGGATT...ATTGCCGCTGCTGTCTCCAGGCATCCCTCTAGCAGCACCTGGATGTAGATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGAGGCACGTAGAGCACTaGCTTGGCGCCGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMRHVEH*LGAAAS
Trigger: GGAGGCGGCGGCGCCAAGCAAGTGCTCTACGTGCCT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCGCAGCCCCGGCCACGTaGCAGGGATGCGAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFAAPAT*QGCEVP
Trigger: CGGGACCTCGCATCCCTGCAACGTGGCCGGGGCTGC...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAGCAGCCCCGGCCACGTaGCAGGGATGCGAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSEAAPAT*QGCEVP
Trigger: CGGGACCTCGCATCCCTGCAACGTGGCCGGGGCTGC...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCAGGCACGTAGAGCACTaGCTTGGCGCCGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLRHVEH*LGAAAS
Trigger: GGAGGCGGCGGCGCCAAGCAAGTGCTCTACGTGCCT...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS GCA 90 bp TACGCCATCCGTGGCATGATGCAGAAAGGTCTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCACAGTTCCCATCTTCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: YAIRGMMQKGLLHQI*HPTCSPQFPSSCEE
Trigger: TTCTTCACAAGAAGATGGGAACTGTGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCATCATGCCACGGATGGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586314.5
ENST00000587971.5
ENST00000591917.5
CDS-3UTR CAA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGGGAAAGCGGGATGTTaGCGCCCACCGCGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGGKAGC*RPPRCS
Trigger: GCTACAGCGCGGTGGGCGCAAACATCCCGCTTTCCC...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp CCGCTCGGCTTCAACGCCGTCTGTCTCATTAACTTTCTCCGAATCGTCATGGTCGAGGTCAGAGTTCCTTaGAAGCACCTTAACACATCA +
Preference number: 5 (lower is better)
Translates to: PLGFNAVCLINFLRIVMVEVRVP*KHLNTS
Trigger: TGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC...GACCATGACGATTCGGAGAAAGTTAATGAGACAGACGGCGTTGAAGCCGAGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS TCA 90 bp TGCCACGTCATGGACACCCCCTCCACTGCTCTGAGTAGCCAAATATaGGTTCCTCTGGACTATTTTTCCAAGCAGATGAAGTCAGCAGTT +
Preference number: 5 (lower is better)
Translates to: CHVMDTPSTALSSQI*VPLDYFSKQMKSAV
Trigger: AACTGCTGACTTCATCTGCTTGGAAAAATAGTCCAGAGGAACTCATATTTGGCTACTCAGAGCAGTGGAGGGGGTGTCCATGACGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 90 bp GGTATATCCCGTGGCATGATGCAGAAAGGTCTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCACAGTTCCCATCTTCTTGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GISRGMMQKGLLHQI*HPTCSPQFPSSCEE
Trigger: TTCTTCACAAGAAGATGGGAACTGTGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCATCATGCCACGGGATATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTAGGCACGTAGAGCACTaGCTTGGCGCCGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGRHVEH*LGAAAS
Trigger: GGAGGCGGCGGCGCCAAGCAAGTGCTCTACGTGCCT...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TCCAGCGTGTTTCCGAATTTGTTCTCCATTTGGCCCCGTTTCCACATGCATCGAGAATTTGTTCTCCATTaGGCCCCGTTTCCACATGCA +
Preference number: 5 (lower is better)
Translates to: SSVFPNLFSIWPRFHMHREFVLH*APFPHA
Trigger: TGCATGTGGAAACGGGGCCAAATGGAGAACAAATTC...TCGATGCATGTGGAAACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS GCA 90 bp TCTGCAGCAGAATCATCCAACATAGTTTGGTCCATCCTGAGTAGCTaGTACACAGAAGGTGCAGTATTTAGGTCTGTGGGTATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: SAAESSNIVWSILSS*YTEGAVFRSVGMAF
Trigger: GAAGGCCATACCCACAGACCTAAATACTGCACCTTCTGTGTAGCAGCTACTCAGGATGGACCAAACTATGTTGGATGATTCTGCTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586553.1
CDS-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACTCCTGGGTCCTGCTTaGACCTTCCCCACGACGGGT +
Preference number: 5 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRLLGPA*TFPTTG
Trigger: ACCCGTCGTGGGGAAGGTCAAAGCAGGACCCAGGAG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGACTCGACTCGGAGCCATaGAGGAGCTGGACGATCCGT +
Preference number: 5 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGLDSEP*RSWTIR
Trigger: ACGGATCGTCCAGCTCCTCAATGGCTCCGAGTCGAG...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCCTCGACTCGGAGCCATaGAGGAGCTGGACGATCCGT +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLLDSEP*RSWTIR
Trigger: ACGGATCGTCCAGCTCCTCAATGGCTCCGAGTCGAG...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGGAATTTGTTCTCCATTaGGCCCCGTTTCCACATGCA +
Preference number: 5 (lower is better)
Translates to: VGHGNWHVVVNHAGHQSGEFVLH*APFPHA
Trigger: TGCATGTGGAAACGGGGCCAAATGGAGAACAAATTC...CCCACTTTGGTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CAA 90 bp CTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTGAATTTGTTCTCCATTaGGCCCCGTTTCCACATGCA +
Preference number: 5 (lower is better)
Translates to: LFWHSEQLIRNRVTASLGEFVLH*APFPHA
Trigger: TGCATGTGGAAACGGGGCCAAATGGAGAACAAATTC...ACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CAA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAGTTTTGCCATCACTGTaGGAGTCTCCCATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQVLPSL*ESPISL
Trigger: CAGGGAGATGGGAGACTCCAACAGTGATGGCAAAAC...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTATTACGGGTCACCGTCTaGGTCTTGCCTGAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVLRVTV*VLPESP
Trigger: CGGGGACTCAGGCAAGACCAAGACGGTGACCCGTAA...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTTTACGGGTCACCGTCTaGGTCTTGCCTGAGTCCCCG +
Preference number: 5 (lower is better)
Translates to: LCWEIKMSLVETANLDLSLRVTV*VLPESP
Trigger: CGGGGACTCAGGCAAGACCAAGACGGTGACCCGTAA...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAACTCGACTCGGAGCCATaGAGGAGCTGGACGATCCGT +
Preference number: 5 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQLDSEP*RSWTIR
Trigger: ACGGATCGTCCAGCTCCTCAATGGCTCCGAGTCGAG...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCCGTCGTAAAGATAGCTTCTCATCTACCCCTACGCCATCATTCACATAAAAACAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: PVVKIASHLPLRHHSHKNSVFPN*FSIWPR
Trigger: ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCT...GTTTTTATGTGAATGATGGCGTAGGGGTAGATGAGAAGCTATCTTTACGACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CAA 90 bp GTGTTTCATGTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: VFHVGHGNWHVVVNHAGHSVFPN*FSIWPR
Trigger: ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCT...GTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTACATGAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CAA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATTTCCCCCTGAAGCAATaGAACTGTGCCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDFPLKQ*NCAPES
Trigger: AGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAA...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGTTCCCCCTGAAGCAATaGAACTGTGCCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMFPLKQ*NCAPES
Trigger: AGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAA...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGTTTTGCCATCACTGTaGGAGTCTCCCATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLVLPSL*ESPISL
Trigger: CAGGGAGATGGGAGACTCCAACAGTGATGGCAAAAC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGTTTTGCCATCACTGTaGGAGTCTCCCATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMVLPSL*ESPISL
Trigger: CAGGGAGATGGGAGACTCCAACAGTGATGGCAAAAC...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATTGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDCSSPV*PSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCA...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAACTATGTGCAGGAGACTaGCTTCCATTTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQLCAGD*LPFSLA
Trigger: GGCGAGAGAAAATGGAAGCAAGTCTCCTGCACATAG...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTCCCCTGTTTAGTGAGAGGTCCTCAGCTCCTCGGTCTACACTCTCATTTTTGCAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATT +
Preference number: 5 (lower is better)
Translates to: LPCLVRGPQLLGLHSHFCKILGT*HSFFKI
Trigger: AATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTT...GCAAAAATGAGAGTGTAGACCGAGGAGCTGAGGACCTCTCACTAAACAGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CAA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGTTCCCCCTGAAGCAATaGAACTGTGCCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: GSISLKRLCSKTRSISVGFPLKQ*NCAPES
Trigger: AGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAA...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CATGTGTTTCATGTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: HVFHVGHGNWHVVVNHAGSCLTA*ISVGLS
Trigger: GCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCT...ACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTACATGAAACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CAA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTCACGGGAGGTTTCAGTaGTCTATTTTCCCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSHGRFQ*SIFPLP
Trigger: TGGCAGGGGGAAAATAGACAACTGAAACCTCCCGTG...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGACCCAGAATTTAAATTaGGCGTTGTCCGTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMTQNLN*ALSVEL
Trigger: GAGCTCCACGGACAACGCCAAATTTAAATTCTGGGT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAAGCAGAATCATCATCTaGCTGGCCATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQSRIII*LAMKIL
Trigger: CAGAATCTTCATGGCCAGCAAGATGATGATTCTGCT...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTTCCCCCTGAAGCAATaGAACTGTGCCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCFPLKQ*NCAPES
Trigger: AGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCGTTTTGCCATCACTGTaGGAGTCTCCCATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLVLPSL*ESPISL
Trigger: CAGGGAGATGGGAGACTCCAACAGTGATGGCAAAAC...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTTGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSCSSPV*PSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCA...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGATGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: EVFLLKDCAVRPEVSLLGCSSPV*PSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCA...TCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLCSSPV*PSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCA...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCCSSPV*PSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAGCCTCTCGTTCCATCTaGAGGTCAGAAATTAGAAGA +
Preference number: 5 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQASRSI*RSEIRR
Trigger: TCTTCTAATTTCTGACCTCAAGATGGAACGAGAGGC...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGCTATGTGCAGGAGACTaGCTTCCATTTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: GSISLKRLCSKTRSISVGLCAGD*LPFSLA
Trigger: GGCGAGAGAAAATGGAAGCAAGTCTCCTGCACATAG...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATTTTTCTGGCACGCTCTaGATACTCAGGGAATTGTCG +
Preference number: 5 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDFSGTL*ILRELS
Trigger: CGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAAA...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CAA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTTCCAGACGCATCCTCTaGGCGGCATTTCTACTCTCA +
Preference number: 5 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSSRRIL*AAFLLS
Trigger: TGAGAGTAGAAATGCCGCCAAGAGGATGCGTCTGGA...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTTCTGGTTTACACTGTTaGTCAGCTGGAGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLSGLHC*SAGADS
Trigger: TGAGTCTGCTCCAGCTGACAAACAGTGTAAACCAGA...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: GSISLKRLCSKTRSISVGSCLTA*ISVGLS
Trigger: GCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCT...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAAAAATGCAGGCTTCTCTaGGAAGTAGTTCCTGATGTG +
Preference number: 5 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQKCRLL*EVVPDV
Trigger: CACATCAGGAACTACTTCCAAGAGAAGCCTGCATTT...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CCA 90 bp AGAATCATTGTGAATTCTGCTCTTCAACTTAAATACCAATGTCTGTaGCAGGCCAATTCTATCATTGCAGATCCAGCATCCCTCAGGCGA +
Preference number: 5 (lower is better)
Translates to: RIIVNSALQLKYQCL*QANSIIADPASLRR
Trigger: TCGCCTGAGGGATGCTGGATCTGCAATGATAGAATTGGCCTGCCACAGACATTGGTATTTAAGTTGAAGAGCAGAATTCACAATGATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTTGCTTGGTCACAGTTaGCAGTTCACACGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCLLGHS*QFTREV
Trigger: AACCTCCCGTGTGAACTGCAAACTGTGACCAAGCAA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGGAATTTGTTCTCCATTaGGCCCCGTTTCCACATGCA +
Preference number: 5 (lower is better)
Translates to: GSISLKRLCSKTRSISVGEFVLH*APFPHA
Trigger: TGCATGTGGAAACGGGGCCAAATGGAGAACAAATTC...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLSVFPN*FSIWPR
Trigger: ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCT...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGAGCAGAATCATCATCTaGCTGGCCATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: PLKHLNTSLTDQGQCGIMSRIII*LAMKIL
Trigger: CAGAATCTTCATGGCCAGCAAGATGATGATTCTGCT...CATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTTTCCCCCTGAAGCAATaGAACTGTGCCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LCWEIKMSLVETANLDLSFPLKQ*NCAPES
Trigger: AGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAA...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGGTTTTGCCATCACTGTaGGAGTCTCCCATCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQVLPSL*ESPISL
Trigger: CAGGGAGATGGGAGACTCCAACAGTGATGGCAAAAC...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTCTATGTGCAGGAGACTaGCTTCCATTTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSLCAGD*LPFSLA
Trigger: GGCGAGAGAAAATGGAAGCAAGTCTCCTGCACATAG...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTCCAGACGCATCCTCTaGGCGGCATTTCTACTCTCA +
Preference number: 5 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQSRRIL*AAFLLS
Trigger: TGAGAGTAGAAATGCCGCCAAGAGGATGCGTCTGGA...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCSCLTA*ISVGLS
Trigger: GCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCT...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTGAGGTCAGAGTTCCTTaGAAGCACCTTAACACATCA +
Preference number: 5 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLEVRVP*KHLNTS
Trigger: TGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTGGTCTGGATCTTGAACTATaGTTTTATACCACAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LFWHSEQLIRNRVTASLGLDLEL*FYTTSF
Trigger: GAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAG...ACCAAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CAA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTAGCATTGATGGAGATTaGGCCATAGTTCTACAGGAT +
Preference number: 5 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLSIDGD*AIVLQD
Trigger: ATCCTGTAGAACTATGGCCAAATCTCCATCAATGCT...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAATTTAAATTTGGCGTaGTCCGTGGAGCTCGACTCG +
Preference number: 5 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSNLNLA*SVELDS
Trigger: CGAGTCGAGCTCCACGGACAACGCCAAATTTAAATT...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATCAAGGACAATGGAAGCCCTTCGATTaGACCCAGAATTTAAATTTG +
Preference number: 5 (lower is better)
Translates to: EVRVPLKHLNTSLTDQGQWKPFD*TQNLNL
Trigger: CAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCA...TTGTCCTTGATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TCTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: SLLGNQNVISGNCKFRPQSVFPN*FSIWPR
Trigger: ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCT...CTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSSVFPN*FSIWPR
Trigger: ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCT...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ATTCTTTTCTGGCACTCTGAGCAGCTCATTAGAAATCGTGTCACCGCTTCTCTTTTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: ILFWHSEQLIRNRVTASLFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...AAGAGAAGCGGTGACACGATTTCTAATGAGCTGCTCAGAGTGCCAGAAAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CAA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAGCAGAATCATCATCTaGCTGGCCATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: GSISLKRLCSKTRSISVGSRIII*LAMKIL
Trigger: CAGAATCTTCATGGCCAGCAAGATGATGATTCTGCT...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTTCCCCCTGAAGCAATaGAACTGTGCCCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGFPLKQ*NCAPES
Trigger: AGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAATGCTCCAGCCCAGTTTaGCCATCACTGTTGGAGTCT +
Preference number: 5 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKCSSPV*PSLLES
Trigger: AGACTCCAACAGTGATGGCAAAACTGGGCTGGAGCA...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACTATGTGCAGGAGACTaGCTTCCATTTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRLCAGD*LPFSLA
Trigger: GGCGAGAGAAAATGGAAGCAAGTCTCCTGCACATAG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTTTTCTGGCACGCTCTaGATACTCAGGGAATTGTCG +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCFSGTL*ILRELS
Trigger: CGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAAA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTCCAGACGCATCCTCTaGGCGGCATTTCTACTCTCA +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGSRRIL*AAFLLS
Trigger: TGAGAGTAGAAATGCCGCCAAGAGGATGCGTCTGGA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATCCAGACGCATCCTCTaGGCGGCATTTCTACTCTCA +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSESRRIL*AAFLLS
Trigger: TGAGAGTAGAAATGCCGCCAAGAGGATGCGTCTGGA...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCTCTGGTTTACACTGTTaGTCAGCTGGAGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCSGLHC*SAGADS
Trigger: TGAGTCTGCTCCAGCTGACAAACAGTGTAAACCAGA...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: LCWEIKMSLVETANLDLSSCLTA*ISVGLS
Trigger: GCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCT...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAAGCTGTCTCACGGCATaGATTTCAGTTGGACTCAGC +
Preference number: 5 (lower is better)
Translates to: FLLKDCAVRPEVSLLGNQSCLTA*ISVGLS
Trigger: GCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCT...TTGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGGAGGTCAGAGTTCCTTaGAAGCACCTTAACACATCA +
Preference number: 5 (lower is better)
Translates to: GSISLKRLCSKTRSISVGEVRVP*KHLNTS
Trigger: TGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC...CCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAATTTAAATTTGGCGTaGTCCGTGGAGCTCGACTCG +
Preference number: 5 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLNLNLA*SVELDS
Trigger: CGAGTCGAGCTCCACGGACAACGCCAAATTTAAATT...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTCTGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTACCCAGAATTTAAATTaGGCGTTGTCCGTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: LCWEIKMSLVETANLDLSTQNLN*ALSVEL
Trigger: GAGCTCCACGGACAACGCCAAATTTAAATTCTGGGT...ACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAGAATTTGTTCTCCATTaGGCCCCGTTTCCACATGCA +
Preference number: 5 (lower is better)
Translates to: TMWHNGSISLKRLCSKTREFVLH*APFPHA
Trigger: TGCATGTGGAAACGGGGCCAAATGGAGAACAAATTC...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSESVFPN*FSIWPR
Trigger: ACGGGGCCAAATGGAGAACAAATTCGGAAACACGCT...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CATGTGTTTCATGTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTTTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: HVFHVGHGNWHVVVNHAGFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...ACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTACATGAAACACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586314.5
ENST00000591917.5
CDS-3UTR CAA 90 bp GGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTGCCTCTCGTTCCATCTaGAGGTCAGAAATTAGAAGA +
Preference number: 5 (lower is better)
Translates to: GSRTMWHNGSISLKRLCSASRSI*RSEIRR
Trigger: TCTTCTAATTTCTGACCTCAAGATGGAACGAGAGGC...ACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCGCCTCTCGTTCCATCTaGAGGTCAGAAATTAGAAGA +
Preference number: 5 (lower is better)
Translates to: YGSRTMWHNGSISLKRLCASRSI*RSEIRR
Trigger: TCTTCTAATTTCTGACCTCAAGATGGAACGAGAGGC...GCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCCTATGTGCAGGAGACTaGCTTCCATTTTCTCTCGCC +
Preference number: 5 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFLCAGD*LPFSLA
Trigger: GGCGAGAGAAAATGGAAGCAAGTCTCCTGCACATAG...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CAA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCATTTTCTGGCACGCTCTaGATACTCAGGGAATTGTCG +
Preference number: 5 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSFSGTL*ILRELS
Trigger: CGACAATTCCCTGAGTATCAAGAGCGTGCCAGAAAA...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS-3UTR CAA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATCTGGTTTACACTGTTaGTCAGCTGGAGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLSGLHC*SAGADS
Trigger: TGAGTCTGCTCCAGCTGACAAACAGTGTAAACCAGA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGAGGTTTTCCATTATCTTACATTTATATTTCCCTaGGGCCTGCTTTGTAAGTTC +
Preference number: 5 (lower is better)
Translates to: ACCSQSCWSPKWEVFHYLTFIFP*GLLCKF
Trigger: GAACTTACAAAGCAGGCCCAAGGGAAATATAAATGT...AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCATGATTGACTACAACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591917.5
CDS-3UTR CAA 90 bp GTGTTTCATGTAGGCCATGGTAATTGGCATGTTGTAGTCAATCATGCTGGTCACAAACCTCTTCCTGTCTaGATTTTTCCTGAAGAGTAT +
Preference number: 5 (lower is better)
Translates to: VFHVGHGNWHVVVNHAGHKPLPV*IFPEEY
Trigger: ATACTCTTCAGGAAAAATCAAGACAGGAAGAGGTTT...GTGACCAGCATGATTGACTACAACATGCCAATTACCATGGCCTACATGAAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591917.5
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTAATTTAAATTTGGCGTaGTCCGTGGAGCTCGACTCG +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGNLNLA*SVELDS
Trigger: CGAGTCGAGCTCCACGGACAACGCCAAATTTAAATT...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCACCCAGAATTTAAATTaGGCGTTGTCCGTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFTQNLN*ALSVEL
Trigger: GAGCTCCACGGACAACGCCAAATTTAAATTCTGGGT...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CAA 90 bp CATAGCTCTCTGAAATTGCTTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: HSSLKLLCKFSFVQRVSEFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...TTCGGAAACACGCTGGACAAAAGAGAACTTACAAAGCAATTTCAGAGAGCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CAA 90 bp AGCTCAAGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTATTCTTTCTTCAAGATaGGAGCTAAGATCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: SSSTSEVRVPLKHLNTSLILSSR*ELRSEF
Trigger: GAACTCTGATCTTAGCTCCAATCTTGAAGAAAGAAT...AAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACTTGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GCATGTTGTAGTCAATCATGCTGGTCACCAAAGTGGGAGGTTTTCCATTATCTTATTCTTTCTTCAAGATaGGAGCTAAGATCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: ACCSQSCWSPKWEVFHYLILSSR*ELRSEF
Trigger: GAACTCTGATCTTAGCTCCAATCTTGAAGAAAGAAT...AAGATAATGGAAAACCTCCCACTTTGGTGACCAGCATGATTGACTACAACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS-3UTR CAA 90 bp AGTACTTCAGAGGTCAGAGTTCCTTTGAAGCACCTTAACACATCACTTACGGATAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATT +
Preference number: 5 (lower is better)
Translates to: STSEVRVPLKHLNTSLTDKILGT*HSFFKI
Trigger: AATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTT...ATCCGTAAGTGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTCTGAAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTAGCAGAATCATCATCTaGCTGGCCATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSSRIII*LAMKIL
Trigger: CAGAATCTTCATGGCCAGCAAGATGATGATTCTGCT...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTGCCTCTCGTTCCATCTaGAGGTCAGAAATTAGAAGA +
Preference number: 5 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSASRSI*RSEIRR
Trigger: TCTTCTAATTTCTGACCTCAAGATGGAACGAGAGGC...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAATCTGGTTTACACTGTTaGTCAGCTGGAGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKSGLHC*SAGADS
Trigger: TGAGTCTGCTCCAGCTGACAAACAGTGTAAACCAGA...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAGAGGTCAGAGTTCCTTaGAAGCACCTTAACACATCA +
Preference number: 5 (lower is better)
Translates to: TMWHNGSISLKRLCSKTREVRVP*KHLNTS
Trigger: TGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTGAGGTCAGAGTTCCTTaGAAGCACCTTAACACATCA +
Preference number: 5 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSEVRVP*KHLNTS
Trigger: TGATGTGTTAAGGTGCTTCAAAGGAACTCTGACCTC...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAAGGCCAATTCTATCATaGCAGATCCAGCATCCCTCA +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSERPILS*QIQHPS
Trigger: TGAGGGATGCTGGATCTGCAATGATAGAATTGGCCT...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS CCA 90 bp AATTGCCAAAAATGGAAATCATTCAGATGTCCTTCAACAAGTAAATaGGTAAATTGTGGTATATCCCGTGGCATGATGCAGAAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: NCQKWKSFRCPSTSK*VNCGISRGMMQKGL
Trigger: GAGACCTTTCTGCATCATGCCACGGGATATACCACAATTTACCCATTTACTTGTTGAAGGACATCTGAATGATTTCCATTTTTGGCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586309.1
CDS-3UTR CAA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCAAGGACTTCCATCCATTaGTTTCCAGAGCTGGAAATA +
Preference number: 5 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSRTSIH*FPELEI
Trigger: TATTTCCAGCTCTGGAAACAAATGGATGGAAGTCCT...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATCATTTTCCCCTTGCTaGGTCACAGTTTGCAGTTCA +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSESFSPC*VTVCSS
Trigger: TGAACTGCAAACTGTGACCAAGCAAGGGGAAAATGA...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTGGAAGCCCTTCGATTaGACCCAGAATTTAAATTTG +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLWKPFD*TQNLNL
Trigger: CAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCA...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAAGCAGAATCATCATCTaGCTGGCCATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSESRIII*LAMKIL
Trigger: CAGAATCTTCATGGCCAGCAAGATGATGATTCTGCT...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGCCTCTCGTTCCATCTaGAGGTCAGAAATTAGAAGA +
Preference number: 5 (lower is better)
Translates to: TSLTDQGQCGIMEVFLLKASRSI*RSEIRR
Trigger: TCTTCTAATTTCTGACCTCAAGATGGAACGAGAGGC...TTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAGGATACAGATGCTaGAAAACCTTTGCACGAAAT +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLLGYRC*KTFARN
Trigger: ATTTCGTGCAAAGGTTTTCAAGCATCTGTATCCTAA...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp ATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTCTGTTGGGAAATCATTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: ISLKRLCSKTRSISVGKSFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...TGATTTCCCAACAGAGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGATTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp AACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTATTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: NTSLTDQGQCGIMEVFLLFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...TAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATT +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLKILGT*HSFFKI
Trigger: AATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTT...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp CTTAACACATCACTTACGGATCAAGGACAATGTGGCATAATGGAAGTATTTCTCCTGGATCTTGAACTATaGTTTTATACCACAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LNTSLTDQGQCGIMEVFLLDLEL*FYTTSF
Trigger: GAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAG...GAGAAATACTTCCATTATGCCACATTGTCCTTGATCCGTAAGTGATGTGTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CAA 90 bp TCACTCATGTGTATCCCACACTATAAAATAAGAAAGAAGGGTAAAGTATGGGGGACGAGATCCTTTTCATaGTTGTTATATCCTGTAGCA +
Preference number: 5 (lower is better)
Translates to: SLMCIPHYKIRKKGKVWGTRSFS*LLYPVA
Trigger: TGCTACAGGATATAACAACAATGAAAAGGATCTCGT...CCCCCATACTTTACCCTTCTTTCTTATTTTATAGTGTGGGATACACATGAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS-3UTR CAA 90 bp CCACTAATATTTCAGCTGGATCTTGAACTATTGTTTTATACCACAAGCTTCTTCTGGAAGCCCTTCGATTaGACCCAGAATTTAAATTTG +
Preference number: 5 (lower is better)
Translates to: PLIFQLDLELLFYTTSFFWKPFD*TQNLNL
Trigger: CAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCA...GAAGAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAGCTGAAATATTAGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTTTTGTAAGTTCTCTTTaGTCCAGCGTGTTTCCGAAT +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGFVSSL*SSVFPN
Trigger: ATTCGGAAACACGCTGGACAAAAGAGAACTTACAAA...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAATTCTTTCTTCAAGATaGGAGCTAAGATCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVILSSR*ELRSEF
Trigger: GAACTCTGATCTTAGCTCCAATCTTGAAGAAAGAAT...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GATCAAGGACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATT +
Preference number: 5 (lower is better)
Translates to: DQGQCGIMEVFLLKDCAVKILGT*HSFFKI
Trigger: AATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTT...TACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGTCCTTGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp GGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGAAGTATCTAAGATTCTGGGGACTTaGCATTCTTTCTTCAAGATT +
Preference number: 5 (lower is better)
Translates to: GIMEVFLLKDCAVRPEVSKILGT*HSFFKI
Trigger: AATCTTGAAGAAAGAATGCAAAGTCCCCAGAATCTT...AGATACTTCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ACAATGTGGCATAATGGAAGTATTTCTCTTAAAAGACTGTGCAGTAAGACCAGACTGGATCTTGAACTATaGTTTTATACCACAAGCTTC +
Preference number: 5 (lower is better)
Translates to: TMWHNGSISLKRLCSKTRLDLEL*FYTTSF
Trigger: GAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAG...TCTGGTCTTACTGCACAGTCTTTTAAGAGAAATACTTCCATTATGCCACATTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CAA 90 bp TGTTGGGAAATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAAATTCTTTCTTCAAGATaGGAGCTAAGATCAGAGTTC +
Preference number: 5 (lower is better)
Translates to: CWEIKMSLVETANLDLSEILSSR*ELRSEF
Trigger: GAACTCTGATCTTAGCTCCAATCTTGAAGAAAGAAT...TTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGATTTCCCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261592.10
ENST00000538587.5
ENST00000586314.5
ENST00000589544.5
ENST00000590712.5
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTCTGGATCTTGAACTATaGTTTTATACCACAAGCTTC +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGLDLEL*FYTTSF
Trigger: GAAGCTTGTGGTATAAAACAATAGTTCAAGATCCAG...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000586314.5
ENST00000589544.5
CDS-3UTR CAA 90 bp ATCAAAATGTCATTAGTGGAAACTGCAAATTTAGACCTCAGTGAATATGGTGGTACGAGATCCTTTTCATaGTTGTTATATCCTGTAGCA +
Preference number: 5 (lower is better)
Translates to: IKMSLVETANLDLSEYGGTRSFS*LLYPVA
Trigger: TGCTACAGGATATAACAACAATGAAAAGGATCTCGT...ACCACCATATTCACTGAGGTCTAAATTTGCAGTTTCCACTAATGACATTTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000535384.5
CDS GCA 72 bp TCACCCGAGGCCCGCGCCCGTCCCGGGGAGCGGCTCTaGCAGGAAAACGGCCCGACCAGTGCCCGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: SPEARARPGERL*QENGPTSARRL
Trigger: CAGGCGCCGGGCACTGGTCGGGCCGTTTTCCTGGCAGAGCCGCTCCCCGGGACGGGCGCGGGCCTCGGGTGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 72 bp CGGGGAGCGGCTCTGCCAGGAAAACGGCCCGACCAGTaGCCGGCGCCTGGGCTGCGTCCGAGCCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: RGAALPGKRPDQ*PAPGLRPSPPS
Trigger: AGAAGGTGGGCTCGGACGCAGCCCAGGCGCCGGGCACTGGTCGGGCCGTTTTCCTGGCAGAGCCGCTCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS TCA 72 bp CGCCTCTCCCGAAAGCAGCCGCCCGCCCAGCGCCTTTaGGCCCCGAAGGGCACACGGGTCCCGGATCTCTCC +
Preference number: 6 (lower is better)
Translates to: RLSRKQPPAQRL*APKGTRVPDLS
Trigger: GGAGAGATCCGGGACCCGTGTGCCCTTCGGGGCTCAAAGGCGCTGGGCGGGCGGCTGCTTTCGGGAGAGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 72 bp GCGCCTCTCCCGAAAGCAGCCGCCCGCCCAGCGCCTTaGAGCCCCGAAGGGCACACGGGTCCCGGATCTCTC +
Preference number: 6 (lower is better)
Translates to: APLPKAAARPAP*SPEGHTGPGSL
Trigger: GAGAGATCCGGGACCCGTGTGCCCTTCGGGGCTCAAAGGCGCTGGGCGGGCGGCTGCTTTCGGGAGAGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 90 bp GTGAGGGCTGCGCCTCTCCCGAAAGCAGCCGCCCGCCCAGCGCCTTaGAGCCCCGAAGGGCACACGGGTCCCGGATCTCTCCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: VRAAPLPKAAARPAP*SPEGHTGPGSLLPP
Trigger: AGGAGGAAGGAGAGATCCGGGACCCGTGTGCCCTTCGGGGCTCAAAGGCGCTGGGCGGGCGGCTGCTTTCGGGAGAGGCGCAGCCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 90 bp ATCTACCCCTACGCCATCCGTGGTCTTGACAGGCACGTAGAGCACTaGCTTGGCGCCGCCGCCTCCCCCGCGGACCTCGTCCGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: IYPYAIRGLDRHVEH*LGAAASPADLVRLA
Trigger: GGCCAGCCGGACGAGGTCCGCGGGGGAGGCGGCGGCGCCAAGCAAGTGCTCTACGTGCCTGTCAAGACCACGGATGGCGTAGGGGTAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS GCA 72 bp CAGGAAAACGGCCCGACCAGTGCCCGGCGCCTGGGCTaGGTCCGAGCCCACCTTCTTCCCTCGTCGTCGTCT +
Preference number: 6 (lower is better)
Translates to: QENGPTSARRLG*VRAHLLPSSSS
Trigger: AGACGACGACGAGGGAAGAAGGTGGGCTCGGACGCAGCCCAGGCGCCGGGCACTGGTCGGGCCGTTTTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 72 bp GCTCTCCATGTTCCCCGCGCTCGGCCGCTGGCCGGATaGTCCCAGCGCACTTCGCACCTGTTCACCCTAGGC +
Preference number: 6 (lower is better)
Translates to: ALHVPRARPLAG*SQRTSHLFTLG
Trigger: GCCTAGGGTGAACAGGTGCGAAGTGCGCTGGGAGCATCCGGCCAGCGGCCGAGCGCGGGGAACATGGAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS CCA 72 bp TTGGCGCCGCCGCCTCCCCCGCGGACCTCGTCCGGCTaGCCCAGCTGGAAGCCCTTCGATTTGACCCAGAAT +
Preference number: 6 (lower is better)
Translates to: LAPPPPPRTSSG*PSWKPFDLTQN
Trigger: ATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGACGAGGTCCGCGGGGGAGGCGGCGGCGCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CAA 72 bp CACCCTAGGCTCATGAAAAATGCAGCCCCGGCCACGTaGCAGGGATGCGAGGTCCCGGCCGCAGCGGGAGCC +
Preference number: 6 (lower is better)
Translates to: HPRLMKNAAPAT*QGCEVPAAAGA
Trigger: GGCTCCCGCTGCGGCCGGGACCTCGCATCCCTGCAACGTGGCCGGGGCTGCATTTTTCATGAGCCTAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS GCA 72 bp CCCAGCCCCACTGGCTTCTGCAGCGTGAGGCTGAGATaGATTGGGCTCTCAATGCCAGTGCCTCGCGGCGCC +
Preference number: 6 (lower is better)
Translates to: PSPTGFCSVRLR*IGLSMPVPRGA
Trigger: GGCGCCGCGAGGCACTGGCATTGAGAGCCCAATGCATCTCAGCCTCACGCTGCAGAAGCCAGTGGGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586309.1
ENST00000586314.5
ENST00000587971.5
CDS CCA 72 bp CCCCACTGGCTTCTGCAGCGTGAGGCTGAGATGCATTaGGCTCTCAATGCCAGTGCCTCGCGGCGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: PHWLLQREAEMH*ALNASASRRLG
Trigger: GCCCAGGCGCCGCGAGGCACTGGCATTGAGAGCCCAATGCATCTCAGCCTCACGCTGCAGAAGCCAGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586309.1
ENST00000586314.5
ENST00000587971.5
CDS CAA 90 bp GCACCTGTTCACCCTAGGCTCATGAAAAATGCAGCCCCGGCCACGTaGCAGGGATGCGAGGTCCCGGCCGCAGCGGGAGCCTGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: APVHPRLMKNAAPAT*QGCEVPAAAGACFG
Trigger: CCCAAAGCAGGCTCCCGCTGCGGCCGGGACCTCGCATCCCTGCAACGTGGCCGGGGCTGCATTTTTCATGAGCCTAGGGTGAACAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261592.10
ENST00000589544.5
CDS GCA 72 bp TCGACGCTGCTGCGGCTCCCCAGCCCCACTGGCTTCTaGAGCGTGAGGCTGAGATGCATTGGGCTCTCAATG +
Preference number: 6 (lower is better)
Translates to: STLLRLPSPTGF*SVRLRCIGLSM
Trigger: CATTGAGAGCCCAATGCATCTCAGCCTCACGCTGCAGAAGCCAGTGGGGCTGGGGAGCCGCAGCAGCGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586309.1
ENST00000586314.5
ENST00000587971.5
CDS TCA 72 bp GCGGGATGTTTGCGCCCACCGCGCTGTAGCTGGTCCTaGCACTTGCAAAATGGTCAGTGGCTCCTGCTCGGC +
Preference number: 6 (lower is better)
Translates to: AGCLRPPRCSWS*HLQNGQWLLLG
Trigger: GCCGAGCAGGAGCCACTGACCATTTTGCAAGTGTCAGGACCAGCTACAGCGCGGTGGGCGCAAACATCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS GCA 72 bp GTTTGCGCCCACCGCGCTGTAGCTGGTCCTGACACTTaGAAAATGGTCAGTGGCTCCTGCTCGGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: VCAHRAVAGPDT*KMVSGSCSARL
Trigger: CAGCCTGGCCGAGCAGGAGCCACTGACCATTTTGCAAGTGTCAGGACCAGCTACAGCGCGGTGGGCGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS CCA 72 bp GTAGTGCCCCAAACAGATATCCGTTCCAGGGGGATGTaGGTAACCGAAGGCAGGCCGCTGGCGGCGGGTATC +
Preference number: 6 (lower is better)
Translates to: VVPQTDIRSRGM*VTEGRPLAAGI
Trigger: GATACCCGCCGCCAGCGGCCTGCCTTCGGTTACCCACATCCCCCTGGAACGGATATCTGTTTGGGGCACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS CAA 90 bp CCCCCGCGGACCTCGTCCGGCTGGCCCAGCTGGAAGCCCTTCGATTaGACCCAGAATTTAAATTTGGCGTTGTCCGTGGAGCTCGACTCG +
Preference number: 6 (lower is better)
Translates to: PPRTSSGWPSWKPFD*TQNLNLALSVELDS
Trigger: CGAGTCGAGCTCCACGGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGACGAGGTCCGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CCA 72 bp CCGCCTCCCCCGCGGACCTCGTCCGGCTGGCCCAGCTaGAAGCCCTTCGATTTGACCCAGAATTTAAATTTG +
Preference number: 6 (lower is better)
Translates to: PPPPRTSSGWPS*KPFDLTQNLNL
Trigger: CAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGACGAGGTCCGCGGGGGAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS GCA 72 bp GCTGGTCCTGACACTTGCAAAATGGTCAGTGGCTCCTaGTCGGCCAGGCTGAGTGTGTGCGTGTGTGTGAGC +
Preference number: 6 (lower is better)
Translates to: AGPDTCKMVSGS*SARLSVCVCVS
Trigger: GCTCACACACACGCACACACTCAGCCTGGCCGAGCAGGAGCCACTGACCATTTTGCAAGTGTCAGGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS GCA 72 bp CCCAGACTAAATCCCGGAAAGGGAAAGCGGGATGTTTaGGCCCACCGCGCTGTAGCTGGTCCTGACACTTGC +
Preference number: 6 (lower is better)
Translates to: PRLNPGKGKRDV*AHRAVAGPDTC
Trigger: GCAAGTGTCAGGACCAGCTACAGCGCGGTGGGCGCAAACATCCCGCTTTCCCTTTCCGGGATTTAGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000588355.1
ENST00000590846.1
CDS CAA 72 bp CGGGTCCCGGATCTCTCCTTCCTCCTGGGTCCTGCTTaGACCTTCCCCACGACGGGTGTTAAGGGACTAGAA +
Preference number: 6 (lower is better)
Translates to: RVPDLSFLLGPA*TFPTTGVKGLE
Trigger: TTCTAGTCCCTTAACACCCGTCGTGGGGAAGGTCAAAGCAGGACCCAGGAGGAAGGAGAGATCCGGGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 72 bp GGAGGGTCCGGTTGGGCACCAGCAATCAATGCCCCGTaGTACCAAGTCTGGTCCATTCGTAATTGCAACGGC +
Preference number: 6 (lower is better)
Translates to: GGSGWAPAINAP*YQVWSIRNCNG
Trigger: GCCGTTGCAATTACGAATGGACCAGACTTGGTAGCACGGGGCATTGATTGCTGGTGCCCAACCGGACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 90 bp AAGGGCACACGGGTCCCGGATCTCTCCTTCCTCCTGGGTCCTGCTTaGACCTTCCCCACGACGGGTGTTAAGGGACTAGAAAGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: KGTRVPDLSFLLGPA*TFPTTGVKGLERES
Trigger: ACTTTCTCTTTCTAGTCCCTTAACACCCGTCGTGGGGAAGGTCAAAGCAGGACCCAGGAGGAAGGAGAGATCCGGGACCCGTGTGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 90 bp GGCTGGCCCAGCTGGAAGCCCTTCGATTTGACCCAGAATTTAAATTaGGCGTTGTCCGTGGAGCTCGACTCGGAGCCATTGAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: GWPSWKPFDLTQNLN*ALSVELDSEPLRSW
Trigger: CCAGCTCCTCAATGGCTCCGAGTCGAGCTCCACGGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CCA 72 bp TGGGCACCAGCAATCAATGCCCCGTGCTACCAAGTCTaGTCCATTCGTAATTGCAACGGCTGTCTCGGACGT +
Preference number: 6 (lower is better)
Translates to: WAPAINAPCYQV*SIRNCNGCLGR
Trigger: ACGTCCGAGACAGCCGTTGCAATTACGAATGGACCAGACTTGGTAGCACGGGGCATTGATTGCTGGTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 72 bp ACCTCGTCCGGCTGGCCCAGCTGGAAGCCCTTCGATTaGACCCAGAATTTAAATTTGGCGTTGTCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: TSSGWPSWKPFD*TQNLNLALSVE
Trigger: CTCCACGGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGGCCAGCCGGACGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CAA 90 bp CCCAGCTGGAAGCCCTTCGATTTGACCCAGAATTTAAATTTGGCGTaGTCCGTGGAGCTCGACTCGGAGCCATTGAGGAGCTGGACGATC +
Preference number: 6 (lower is better)
Translates to: PSWKPFDLTQNLNLA*SVELDSEPLRSWTI
Trigger: GATCGTCCAGCTCCTCAATGGCTCCGAGTCGAGCTCCACGGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CCA 72 bp GCTACACAGAAGGTGCAGTATTTAGGTCTGTGGGTATaGCCTTCAGGTTCACTGGGCCAAGGCGGTGGTTCT +
Preference number: 6 (lower is better)
Translates to: ATQKVQYLGLWV*PSGSLGQGGGS
Trigger: AGAACCACCGCCTTGGCCCAGTGAACCTGAAGGCCATACCCACAGACCTAAATACTGCACCTTCTGTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586553.1
CDS TCA 72 bp CCCCCTGCCACGTCATGGACACCCCCTCCACTGCTCTaGGTAGCCAAATATGAGTTCCTCTGGACTATTTTT +
Preference number: 6 (lower is better)
Translates to: PPATSWTPPPLL*VAKYEFLWTIF
Trigger: AAAAATAGTCCAGAGGAACTCATATTTGGCTACTCAGAGCAGTGGAGGGGGTGTCCATGACGTGGCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 72 bp TTGGTCACAGTTTGCAGTTCACACGGGAGGTTTCAGTaGTCTATTTTCCCCCTGCCACGTCATGGACACCCC +
Preference number: 6 (lower is better)
Translates to: LVTVCSSHGRFQ*SIFPLPRHGHP
Trigger: GGGGTGTCCATGACGTGGCAGGGGGAAAATAGACAACTGAAACCTCCCGTGTGAACTGCAAACTGTGACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 72 bp AATGCCCCGTGCTACCAAGTCTGGTCCATTCGTAATTaGAACGGCTGTCTCGGACGTTTTTCCTGTTCCCTT +
Preference number: 6 (lower is better)
Translates to: NAPCYQVWSIRN*NGCLGRFSCSL
Trigger: AAGGGAACAGGAAAAACGTCCGAGACAGCCGTTGCAATTACGAATGGACCAGACTTGGTAGCACGGGGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 72 bp CGTGGCATGATGCAGAAAGGTCTCCTGCATCAGATCTaGCATCCTACTTGTAGCCCACAGTTCCCATCTTCT +
Preference number: 6 (lower is better)
Translates to: RGMMQKGLLHQI*HPTCSPQFPSS
Trigger: AGAAGATGGGAACTGTGGGCTACAAGTAGGATGGCAGATCTGATGCAGGAGACCTTTCTGCATCATGCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538587.5
ENST00000586309.1
ENST00000586314.5
ENST00000587971.5
ENST00000591917.5
CDS CAA 72 bp AAGCCCTTCGATTTGACCCAGAATTTAAATTTGGCGTaGTCCGTGGAGCTCGACTCGGAGCCATTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: KPFDLTQNLNLA*SVELDSEPLRS
Trigger: GCTCCTCAATGGCTCCGAGTCGAGCTCCACGGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CAA 72 bp AGCTGGAAGCCCTTCGATTTGACCCAGAATTTAAATTaGGCGTTGTCCGTGGAGCTCGACTCGGAGCCATTG +
Preference number: 6 (lower is better)
Translates to: SWKPFDLTQNLN*ALSVELDSEPL
Trigger: CAATGGCTCCGAGTCGAGCTCCACGGACAACGCCAAATTTAAATTCTGGGTCAAATCGAAGGGCTTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000589544.5
ENST00000590712.5
CDS CAA 72 bp CCCCCTGAAGCAATTGAACTGTGCCCCAGAGTCTCATaGCCATTAAAGCTCTCTGCAGCAGAATCATCCAAC +
Preference number: 6 (lower is better)
Translates to: PPEAIELCPRVS*PLKLSAAESSN
Trigger: GTTGGATGATTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGCTTCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586553.1
CDS CAA 90 bp CTCTTCAACTTAAATACCAATGTCTGTGGCAGGCCAATTCTATCATaGCAGATCCAGCATCCCTCAGGCGAGGTCCAACCTTTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: LFNLNTNVCGRPILS*QIQHPSGEVQPFSR
Trigger: TCGAGAGAAAGGTTGGACCTCGCCTGAGGGATGCTGGATCTGCAATGATAGAATTGGCCTGCCACAGACATTGGTATTTAAGTTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS CAA 90 bp CTGTGTGTTCCCCCTGAAGCAATTGAACTGTGCCCCAGAGTCTCATaGCCATTAAAGCTCTCTGCAGCAGAATCATCCAACATAGTTTGG +
Preference number: 6 (lower is better)
Translates to: LCVPPEAIELCPRVS*PLKLSAAESSNIVW
Trigger: CCAAACTATGTTGGATGATTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGTTCAATTGCTTCAGGGGGAACACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586553.1
CDS TCA 72 bp ATGGACACCCCCTCCACTGCTCTGAGTAGCCAAATATaGGTTCCTCTGGACTATTTTTCCAAGCAGATGAAG +
Preference number: 6 (lower is better)
Translates to: MDTPSTALSSQI*VPLDYFSKQMK
Trigger: CTTCATCTGCTTGGAAAAATAGTCCAGAGGAACTCATATTTGGCTACTCAGAGCAGTGGAGGGGGTGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS TCA 72 bp GATGGGACCCCCAGACAGGACTCCTCTGGTTTCTGCTaGACAAGACATAGAAGTAAGTTTAGGATACAGATG +
Preference number: 6 (lower is better)
Translates to: DGTPRQDSSGFC*TRHRSKFRIQM
Trigger: CATCTGTATCCTAAACTTACTTCTATGTCTTGTTCAGCAGAAACCAGAGGAGTCCTGTCTGGGGGTCCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS GCA 72 bp GAATCATCCAACATAGTTTGGTCCATCCTGAGTAGCTaGTACACAGAAGGTGCAGTATTTAGGTCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: ESSNIVWSILSS*YTEGAVFRSVG
Trigger: ACCCACAGACCTAAATACTGCACCTTCTGTGTAGCAGCTACTCAGGATGGACCAAACTATGTTGGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586553.1
CDS CCA 72 bp GAAGCCAAGATACTCTCTGCAACTGCTGAAGTAAGGTaGGAAGGAATAGGTCGAGACATCTCAAAACCACTT +
Preference number: 6 (lower is better)
Translates to: EAKILSATAEVR*EGIGRDISKPL
Trigger: AAGTGGTTTTGAGATGTCTCGACCTATTCCTTCCCACCTTACTTCAGCAGTTGCAGAGAGTATCTTGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261592.10
ENST00000535384.5
ENST00000538587.5
CDS GCA 72 bp ACTGTGCCCCAGAGTCTCATTGCCATTAAAGCTCTCTaGAGCAGAATCATTGTGAATTCTGCTCTTCAACTT +
Preference number: 6 (lower is better)
Translates to: TVPQSLIAIKAL*SRIIVNSALQL
Trigger: AAGTTGAAGAGCAGAATTCACAATGATTCTGCTGCAGAGAGCTTTAATGGCAATGAGACTCTGGGGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS CAA 90 bp TGGGCCTGCTTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGTTTCCACATGCATCGAATAAATAAT +
Preference number: 6 (lower is better)
Translates to: WACFVSSLLSSVFPN*FSIWPRFHMHRINN
Trigger: ATTATTTATTCGATGCATGTGGAAACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTACAAAGCAGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591917.5
CDS TCA 72 bp CTTCTCTCAAGGTTTCAGCCTGGGTACCATAGCATTTaGACCAAAGACTCTGTATATGAGTCCCAAGGAAAA +
Preference number: 6 (lower is better)
Translates to: LLSRFQPGYHSI*TKDSVYESQGK
Trigger: TTTTCCTTGGGACTCATATACAGAGTCTTTGGTTCAAATGCTATGGTACCCAGGCTGAAACCTTGAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586553.1
CDS CCA 72 bp GTGAATTCTGCTCTTCAACTTAAATACCAATGTCTGTaGCAGGCCAATTCTATCATTGCAGATCCAGCATCC +
Preference number: 6 (lower is better)
Translates to: VNSALQLKYQCL*QANSIIADPAS
Trigger: GGATGCTGGATCTGCAATGATAGAATTGGCCTGCCACAGACATTGGTATTTAAGTTGAAGAGCAGAATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535384.5
CDS CAA 72 bp TACAGAAAGATCATTTTCCCCTTGCTTGGTCACAGTTaGCAGTTCACACGGGAGGTTTCAGTTGTCTATTTT +
Preference number: 6 (lower is better)
Translates to: YRKIIFPLLGHS*QFTREVSVVYF
Trigger: AAAATAGACAACTGAAACCTCCCGTGTGAACTGCAAACTGTGACCAAGCAAGGGGAAAATGATCTTTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261592.10
CDS CAA 90 bp CTGTATTGCTTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGTTTCCACATGCATCGAATAAATAAT +
Preference number: 6 (lower is better)
Translates to: LYCFVSSLLSSVFPN*FSIWPRFHMHRINN
Trigger: ATTATTTATTCGATGCATGTGGAAACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTACAAAGCAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586314.5
CDS CAA 90 bp CATTATTGCTTTGTAAGTTCTCTTTTGTCCAGCGTGTTTCCGAATTaGTTCTCCATTTGGCCCCGTTTCCACATGCATCGAATAAATAAT +
Preference number: 6 (lower is better)
Translates to: HYCFVSSLLSSVFPN*FSIWPRFHMHRINN
Trigger: ATTATTTATTCGATGCATGTGGAAACGGGGCCAAATGGAGAACAAATTCGGAAACACGCTGGACAAAAGAGAACTTACAAAGCAATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587971.5
CDS CCA 72 bp AAATGGAAATCATTCAGATGTCCTTCAACAAGTAAATaGGTAAATTGTGGTATATCCCGTGGCATGATGCAG +
Preference number: 6 (lower is better)
Translates to: KWKSFRCPSTSK*VNCGISRGMMQ
Trigger: CTGCATCATGCCACGGGATATACCACAATTTACCCATTTACTTGTTGAAGGACATCTGAATGATTTCCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586309.1