RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000140939

Ensembl transcript IDs: ENST00000268605.11, ENST00000563258.1, ENST00000563439.5, ENST00000564053.5, ENST00000564860.1, ENST00000564992.1, ENST00000565560.5, ENST00000565645.1, ENST00000566871.5, ENST00000568086.1, ENST00000568146.1, ENST00000568199.1, ENST00000568503.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGCCCAGGTCCCTGGGACTCAGAGGTACCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGA +
Preference number: 1 (lower is better)
Translates to: ACPGPWDSEVPTLSS*ANSQNRGESPGPVR
Trigger: TCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR CCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCC +
Preference number: 1 (lower is better)
Translates to: PVRPSGVYSLPAVLG*TEPWWHPIQLQQHP
Trigger: GGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
3UTR CCA 90 bp CAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: QVPSDPPEFIHFQRY*AGPSLGGIRFSSSS
Trigger: GCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
3UTR CCA 90 bp GGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCA +
Preference number: 1 (lower is better)
Translates to: GVYSLPAVLGWTEPW*HPIQLQQHPRSYPA
Trigger: TGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
3UTR CCA 90 bp TCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCA +
Preference number: 1 (lower is better)
Translates to: SGVYSLPAVLGWTEP*WHPIQLQQHPRSYP
Trigger: TGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
3UTR CCA 90 bp CTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACT +
Preference number: 1 (lower is better)
Translates to: LRGTHPKFLGKQPES*REPRSRPTLRSLFT
Trigger: AGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR GCA 90 bp GTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCCCTTaGTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTAC +
Preference number: 1 (lower is better)
Translates to: VSSKPSLCGEKSPSP*SMFSSGTCVGLSWY
Trigger: GTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAGGGTGACTTCTCTCCACATAGGGAGGGCTTAGAGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR CCA 90 bp AGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTaGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGGGTCA +
Preference number: 1 (lower is better)
Translates to: RNLRGVELVPTYAAK*LTRGNGLCMRAGGS
Trigger: TGACCCTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
3UTR GCA 90 bp GGAGAGAAGTCACCCTCCCCTTGCTCCATGTTCAGCTCAGGAACTTaGGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GEKSPSPCSMFSSGT*VGLSWYLHMLPSGS
Trigger: TGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAGGGTGACTTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp CCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: PKFLGKQPESWREPRSRPRSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...CGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
3UTR-3UTR CCA 90 bp TATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGGGAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: YAAKWLTRGNGLCMRAGGRSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...CCCTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
3UTR-3UTR TCA 90 bp CATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGGGGCTGAGGACTGGATaGTGCTCGTGGTGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: HMLPSGSPGEMGCVCGQEGLRTG*CSWWAW
Trigger: CCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCC...CTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp TTGTGTATGCGGGCAGGAGGGTCAGGTCCTTGTCCCACTAGGGGGCTAGGTTTGGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 2 (lower is better)
Translates to: LCMRAGGSGPCPTRGLGLGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...CAAACCTAGCCCCCTAGTGGGACAAGGACCTGACCCTCCTGCCCGCATACACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR CAA 90 bp CTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCC +
Preference number: 2 (lower is better)
Translates to: LRSLFTSSGTGLDRA*VASDSAPAASQVLS
Trigger: GGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
3UTR CAA 90 bp CTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTaGTGTATGCGGGCAGGAGGGTCAGGTCCTTGTCCCACTAGGGGG +
Preference number: 2 (lower is better)
Translates to: LVPTYAAKWLTRGNG*CMRAGGSGPCPTRG
Trigger: CCCCCTAGTGGGACAAGGACCTGACCCTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp AATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 2 (lower is better)
Translates to: NRGESPGPVRPSGVYSLPGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...TGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp GTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: VGLSWYLHMLPSGSPGEMPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...CATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp ATTAGGGCTGAGGACTGGATGATGCTCGTGGTGGGCTTGGGCCTGCCCAGGTCCCCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGT +
Preference number: 2 (lower is better)
Translates to: IRAEDWMMLVVGLGLPRSPTLSS*ANSQNR
Trigger: ACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGG...GGACCTGGGCAGGCCCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR GCA 90 bp ATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCATGGTGGGCTTGGGCCTaGCCAGGTCCCTGGGACTCA +
Preference number: 2 (lower is better)
Translates to: MFSSGTCVGLSWYLHMLPWWAWA*PGPWDS
Trigger: TGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCA...TGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR GCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTTGGTGGGCTTGGGCCTaGCCAGGTCCCTGGGACTCA +
Preference number: 2 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCWWAWA*PGPWDS
Trigger: TGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCA...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp TCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCAAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: SGTCVGLSWYLHMLPSGSRSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...TGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
3UTR-3UTR CCA 90 bp ACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 2 (lower is better)
Translates to: TYAAKWLTRGNGLCMRAGGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...TCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp TTCTGCTCCCCTCTTCTAGTCTCACTTCCCAAGGCTGTGAGCTCTAAGCCCTCCGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 2 (lower is better)
Translates to: FCSPLLVSLPKAVSSKPSGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...GGAGGGCTTAGAGCTCACAGCCTTGGGAAGTGAGACTAGAAGAGGGGAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp CCCTCCCCTTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGT +
Preference number: 2 (lower is better)
Translates to: PSPCSMFSSGTCVGLSWYKQPES*REPRSR
Trigger: ACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTT...GTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGCCTGCCCAGGTCCCTaGGACTCAGAGGTACCCACC +
Preference number: 2 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCACPGP*DSEVPT
Trigger: GGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp AGTCACTGGTCAGAATCCTCACTGAGCTCCCAGTCCAGAGAGAAGCCAGACAATCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: SHWSESSLSSQSREKPDNPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...ATTGTCTGGCTTCTCTCTGGACTGGGAGCTCAGTGAGGATTCTGACCAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp ACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCCTCTTCGCCTGCCCAGGTCCCTaGGACTCAGAGGTACCCACC +
Preference number: 2 (lower is better)
Translates to: TMMCVAFVYSRSLSAPLFACPGP*DSEVPT
Trigger: GGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC...GAAGAGGGGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp GTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VPTYAAKWLTRGNGLCMRWTEPW*HPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCA...CCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCWTEPW*HPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCA...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp GAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGT +
Preference number: 2 (lower is better)
Translates to: ELVPTYAAKWLTRGNGLCKQPES*REPRSR
Trigger: ACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTT...ACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CCA 90 bp AAGTCACTGGTCAGAATCCTCACTGAGCTCCCAGTCCAGAGAGAAGCCAGACAAATTAGGGCTGAGGACTaGATGATGCTCGTGGTGGGC +
Preference number: 2 (lower is better)
Translates to: KSLVRILTELPVQREARQIRAED*MMLVVG
Trigger: GCCCACCACGAGCATCATCCAGTCCTCAGCCCTAAT...TTGTCTGGCTTCTCTCTGGACTGGGAGCTCAGTGAGGATTCTGACCAGTGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR GCA 90 bp GATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCCTCTTCTAGTCTTCAGCTCAGGAACTTaGGTGGGGTTGAGCTGGTAC +
Preference number: 2 (lower is better)
Translates to: DVCGLCLLKVPFCSPLLVFSSGT*VGLSWY
Trigger: GTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAA...GACTAGAAGAGGGGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp TTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATCCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGT +
Preference number: 2 (lower is better)
Translates to: LLHVQLRNLRGVELVPTYPTLSS*ANSQNR
Trigger: ACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGG...ATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CCA 90 bp CAGACAATTAAAACAGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTGCGTGGGGTTGAGCTaGTACCTACATATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QTIKTVMTMMCVAFVYSRCVGLS*YLHMLP
Trigger: TGGCAGCATATGTAGGTACCAGCTCAACCCCACGCA...CCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACTGTTTTAATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR-3UTR CAA 90 bp CTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 3 (lower is better)
Translates to: LGKQPESWREPRSRPTLRGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...CCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR TCA 72 bp TGGACTCCTAAGGGCAGATTAGGGCTGAGGACTGGATaGTGCTCGTGGTGGGCTTGGGCCTGCCCAGGTCCC +
Preference number: 3 (lower is better)
Translates to: WTPKGRLGLRTG*CSWWAWACPGP
Trigger: GGGACCTGGGCAGGCCCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCCTAATCTGCCCTTAGGAGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR CCA 72 bp TCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: SLPAVLGWTEPW*HPIQLQQHPRS
Trigger: GGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
3UTR CCA 72 bp ACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGT +
Preference number: 3 (lower is better)
Translates to: THPKFLGKQPES*REPRSRPTLRS
Trigger: ACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR CCA 72 bp TATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGG +
Preference number: 3 (lower is better)
Translates to: YSLPAVLGWTEP*WHPIQLQQHPR
Trigger: CCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
3UTR CCA 72 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: PSGVYSLPAVLG*TEPWWHPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
3UTR CCA 72 bp TCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGC +
Preference number: 3 (lower is better)
Translates to: SDPPEFIHFQRY*AGPSLGGIRFS
Trigger: GCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
3UTR CCA 72 bp GGTCCCTGGGACTCAGAGGTACCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGT +
Preference number: 3 (lower is better)
Translates to: GPWDSEVPTLSS*ANSQNRGESPG
Trigger: ACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CAA 90 bp GAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 3 (lower is better)
Translates to: ELVPTYAAKWLTRGNGLCGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...ACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR GCA 72 bp AAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCCCTTaGTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTG +
Preference number: 3 (lower is better)
Translates to: KPSLCGEKSPSP*SMFSSGTCVGL
Trigger: CAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAGGGTGACTTCTCTCCACATAGGGAGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR CCA 72 bp ACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATaGGTTGTGTATGCGGGCAGGAGGGTCAGGTCCTTG +
Preference number: 3 (lower is better)
Translates to: TYICCQVAHQGK*VVYAGRRVRSL
Trigger: CAAGGACCTGACCCTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
3UTR CCA 72 bp CGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTaGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCA +
Preference number: 3 (lower is better)
Translates to: RGVELVPTYAAK*LTRGNGLCMRA
Trigger: TGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
3UTR-3UTR CAA 90 bp AGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCATGCTCGTGGTGGGCTaGGGCCTGCCCAGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: SNDNDVCGLCLLKVPFCSMLVVG*GLPRSL
Trigger: CAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCAT...GGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR GCA 72 bp TCACCCTCCCCTTGCTCCATGTTCAGCTCAGGAACTTaGGTGGGGTTGAGCTGGTACCTACATATGCTGCCA +
Preference number: 3 (lower is better)
Translates to: SPSPCSMFSSGT*VGLSWYLHMLP
Trigger: TGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp GCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTGGCCTCCGGGGTCCCGGATTaGACCGCCTCGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ASQVLSSMGGAPPVRALASGVPD*TASEPS
Trigger: TGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGA...GGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CCA 90 bp TCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCGCGCCCGCGGTACGCTaGGCACAGCGTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SAPAASQVLSSMGGAPPVAPAVR*AQRSSS
Trigger: GGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGC...GACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR TCA 90 bp CCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGCGTACTCTGGCCCGGTaGGCACGCCCCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRSRPTLRSLFTSSGTGLRTLAR*ARPAPA
Trigger: TGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACG...CAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCGCCTCGCCCTTGCCCTaGACCAGCAGCAGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: SAPAASQVLSSMGGAPPVASPLP*TSSSRR
Trigger: CCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGC...GACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR CCA 90 bp GGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCGCAACCCGGGGCATGTaGTCCCCGAGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLDRALVASDSAPAASQVATRGM*SPSRVP
Trigger: AGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGC...GACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTGGCCTTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: ASQVLSSMGGAPPVRALAFQLWL*LLRGPG
Trigger: TCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAA...GGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR TCA 90 bp GTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTCGTACTCTGGCCCGGTaGGCACGCCCCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: VRPSGVYSLPAVLGWTEPRTLAR*ARPAPA
Trigger: TGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACG...AGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR TCA 90 bp AGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGTACTCTGGCCCGGTaGGCACGCCCCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRPTLRSLFTSSGTGLDRTLAR*ARPAPA
Trigger: TGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACG...GTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGCAACCCGGGGCATGTaGTCCCCGAGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TGLDRALVASDSAPAASQATRGM*SPSRVP
Trigger: AGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGC...CTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTGGCCAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ASQVLSSMGGAPPVRALARSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...GGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR TCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGGGCCTCGTCAGGGTCTaGAGCTCTGGGCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: PVRPSGVYSLPAVLGWTEGLVRV*SSGQPG
Trigger: CCCGGGTTGCCCAGAGCTTCAGACCCTGACGAGGCC...CTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR TCA 90 bp TTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCGGCCTCGTCAGGGTCTaGAGCTCTGGGCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: FQRYWAGPSLGGIRFSSSGLVRV*SSGQPG
Trigger: CCCGGGTTGCCCAGAGCTTCAGACCCTGACGAGGCC...GCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGGTAGGCGGCGCACCCTaGGCTCGGCATCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VERAQVPSDPPEFIHFQRVGGAP*ARHQAV
Trigger: CACTGCCTGATGCCGAGCGCAGGGTGCGCCGCCTAC...CCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTGCCTCGCCCTTGCCCTaGACCAGCAGCAGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: WAGPSLGGIRFSSSSIPGASPLP*TSSSRR
Trigger: CCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGC...ACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp AGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGCCCGGACCCACGTGCTaGCAGTCCCAAGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RAQVPSDPPEFIHFQRYWPGPTC*QSQAGS
Trigger: GGACCCCGCTTGGGACTGGCAGCACGTGGGTCCGGG...CCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR GCA 90 bp GCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATTCCGGGGTCCCGGATTaGACCGCCTCGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AVLGWTEPWWHPIQLQQHSGVPD*TASEPS
Trigger: TGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGA...ATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTGGTGGGCTTGGGCCTaGCCAGGTCCCTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: LGWTEPWWHPIQLQQHPRWWAWA*PGPWDS
Trigger: TGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCA...CCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGCGTAGCAGCTCCTaGCAGGCGGCCTCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GTGLDRALVASDSAPAASQRSSS*QAASPL
Trigger: CAAGGGCGAGGCCGCCTGCCAGGAGCTGCTACGCTG...GGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCGCGCCCGCGGTACGCTaGGCACAGCGTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RALVASDSAPAASQVLSSAPAVR*AQRSSS
Trigger: GGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGC...GCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR CCA 90 bp TCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: SAPAASQVLSSMGGAPPVPVAWA*RVIAAV
Trigger: GACCGCAGCTATGACCCTCCATGCCCAGGCCACTGG...GACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGGCCTCCGGCGTCCAGTaGCCTGGGCATGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PVRPSGVYSLPAVLGWTEASGVQ*PGHGGS
Trigger: TGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGC...CTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCGCAACCCGGGGCATGTaGTCCCCGAGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGWTEPWWHPIQLATRGM*SPSRVP
Trigger: AGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGC...GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCTTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SWANSQNRGESPGPVRPSFQLWL*LLRGPG
Trigger: TCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAA...GGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCCTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SAPAASQVLSSMGGAPPVLSFQL*LWLLRG
Trigger: ACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAG...GACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CCA 90 bp GCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTGGCCCGCAAGCACAGGACCTaGAGGCCAACACGGGGAACT +
Preference number: 4 (lower is better)
Translates to: ASQVLSSMGGAPPVRALARKHRT*RPTRGT
Trigger: AGTTCCCCGTGTTGGCCTCCAGGTCCTGTGCTTGCG...GGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563258.1
ENST00000564053.5
CDS-3UTR TCA 90 bp CCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGGGCCTCGTCAGGGTCTaGAGCTCTGGGCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: PKFLGKQPESWREPRSRPGLVRV*SSGQPG
Trigger: CCCGGGTTGCCCAGAGCTTCAGACCCTGACGAGGCC...CGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PVRPSGVYSLPAVLGWTESDGRS*ALPIVG
Trigger: CCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGA...CTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGG +
Preference number: 4 (lower is better)
Translates to: PSDPPEFIHFQRYWAGPSSDGRS*ALPIVG
Trigger: CCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGA...GCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGAGTAGGCGGCGCACCCTaGGCTCGGCATCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QVPSDPPEFIHFQRYWAGVGGAP*ARHQAV
Trigger: CACTGCCTGATGCCGAGCGCAGGGTGCGCCGCCTAC...TCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp AGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACTCCGGGGTCCCGGATTaGACCGCCTCGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RSRPTLRSLFTSSGTGLDSGVPD*TASEPS
Trigger: TGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGA...GTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGATCCGGGGTCCCGGATTaGACCGCCTCGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QVPSDPPEFIHFQRYWAGSGVPD*TASEPS
Trigger: TGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGA...TCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACTGGTGGGCTTGGGCCTaGCCAGGTCCCTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: HPIQLQQHPRSYPAWAGHWWAWA*PGPWDS
Trigger: TGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCA...GTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CCA 90 bp GTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCCAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: VLGWTEPWWHPIQLQQHPQCLVL*PGEHAP
Trigger: CGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTG...GGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTGTGTATGCGGGCAGGAGGGTCAGGTCCTTGTCCCACTAGGGGGCTAGGTTTGGCAACCCGGGGCATGTaGTCCCCGAGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LCMRAGGSGPCPTRGLGLATRGM*SPSRVP
Trigger: AGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGC...CAAACCTAGCCCCCTAGTGGGACAAGGACCTGACCCTCCTGCCCGCATACACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CTGGATGATGCTCGTGGTGGGCTTGGGCCTGCCCAGGTCCCTGGGACTCAGAGGCTCCAGTTCCGGCTCTaGTTCTGCTTCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LDDARGGLGPAQVPGTQRLQFRL*FCFSLG
Trigger: CCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAG...CCTCTGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCATCATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWVGLGL*VRFWLQ
Trigger: CTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGAC...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCACCCAAGCGTCAGCCGTaGCTCTCCTCTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SGTGLDRALVASDSAPAAPKRQP*LSSPPL
Trigger: CAGGGGAGGAGAGGAGAGCCACGGCTGACGCTTGGG...TGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS-3UTR TCA 90 bp CGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTT +
Preference number: 4 (lower is better)
Translates to: RALVASDSAPAASQVLSSAVDSL*RPLLRV
Trigger: AACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGC...GCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR TCA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTT +
Preference number: 4 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWAVDSL*RPLLRV
Trigger: AACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGC...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR TCA 90 bp GGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTAGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTT +
Preference number: 4 (lower is better)
Translates to: GESPGPVRPSGVYSLPAVAVDSL*RPLLRV
Trigger: AACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGC...TACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp AGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCCGTACTCTGGCCCGGTaGGCACGCCCCGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSGTCVGLSWYLHMLPSGRTLAR*ARPAPA
Trigger: TGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACG...GCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCGCCTCGCCCTTGCCCTaGACCAGCAGCAGTAGGCGG +
Preference number: 4 (lower is better)
Translates to: PEFIHFQRYWAGPSLGGIASPLP*TSSSRR
Trigger: CCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGC...GATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGCCCGGACCCACGTGCTaGCAGTCCCAAGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: HMLPSGSPGEMGCVCGQEPGPTC*QSQAGS
Trigger: GGACCCCGCTTGGGACTGGCAGCACGTGGGTCCGGG...CTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR GCA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGGCCGCTCCTGCGCGTTaGCCATTGTCGGGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWAAPAR*PLSGLD
Trigger: ATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGC...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: VERAQVPSDPPEFIHFQRPVAWA*RVIAAV
Trigger: GACCGCAGCTATGACCCTCCATGCCCAGGCCACTGG...CCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCGCCTCCGGCGTCCAGTaGCCTGGGCATGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ESWREPRSRPTLRSLFTSASGVQ*PGHGGS
Trigger: TGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGC...GGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCCCTGCCTCCGGCGTCCAGTaGCCTGGGCATGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PKAVSSKPSLCGEKSPSPASGVQ*PGHGGS
Trigger: TGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGC...AGGGGAGGGTGACTTCTCTCCACATAGGGAGGGCTTAGAGCTCACAGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp AATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCAACCCGGGGCATGTaGTCCCCGAGCCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: NRGESPGPVRPSGVYSLPATRGM*SPSRVP
Trigger: AGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGC...TGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCCAGGGTCTGAAGCTCTaGGCAACCCGGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: GPVRPSGVYSLPAVLGWTQGLKL*ATRGMW
Trigger: CCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTG...GGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGCAGGGTCTGAAGCTCTaGGCAACCCGGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: PRSRPTLRSLFTSSGTGLQGLKL*ATRGMW
Trigger: CCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTG...CAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACTTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RSRPTLRSLFTSSGTGLDFQLWL*LLRGPG
Trigger: TCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAA...GTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGGGCAGGAGGGTCAGGTCCTTGTCCCACTAGGGGGCTAGGTTTGGGATCTCCACTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RAGGSGPCPTRGLGLGSPLSFQL*LWLLRG
Trigger: ACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAG...TGGAGATCCCAAACCTAGCCCCCTAGTGGGACAAGGACCTGACCCTCCTGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RYWAGPSLGGIRFSSSSILSFQL*LWLLRG
Trigger: ACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAG...GATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGCTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RGESPGPVRPSGVYSLPALSFQL*LWLLRG
Trigger: ACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAG...CGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCTTCCAGCTCTGGCTCTaGCTCCGGCTCCGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VLGWTEPWWHPIQLQQHPFQLWL*LRLRFS
Trigger: GCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAA...GGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCTTCCAGCTCTGGCTCTaGCTCCGGCTCCGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GPVRPSGVYSLPAVLGWTFQLWL*LRLRFS
Trigger: GCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAA...GGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATTTCCAGCTCTGGCTCTaGCTCCGGCTCCGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AVLGWTEPWWHPIQLQQHFQLWL*LRLRFS
Trigger: GCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAA...ATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGCTCTGGGTCCGGTTCTaGCTCCAGTTCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VPSDPPEFIHFQRYWAGPLWVRF*LQFRLW
Trigger: CCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAG...CGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCTCTGGGTCCGGTTCTaGCTCCAGTTCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVRPSGVYSLPAVLGWTELWVRF*LQFRLW
Trigger: CCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAG...CTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCCCTGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PKAVSSKPSLCGEKSPSPVGLGL*VRFWLQ
Trigger: CTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGAC...AGGGGAGGGTGACTTCTCTCCACATAGGGAGGGCTTAGAGCTCACAGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp AACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NSQNRGESPGPVRPSGVYVGLGL*VRFWLQ
Trigger: CTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGAC...ATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPPEFIHFQRYWAGPSLGVGLGL*VRFWLQ
Trigger: CTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGAC...ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGESPGPVRPSGVYSLPARSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...CGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PVRPSGVYSLPAVLGWTEPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...CTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VERAQVPSDPPEFIHFQRPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...CCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTAGCCTGCCCAGGTCCCTaGGACTCAGAGGTACCCACC +
Preference number: 4 (lower is better)
Translates to: GESPGPVRPSGVYSLPAVACPGP*DSEVPT
Trigger: GGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC...TACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp AACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGCGGCGGGGCAGGAGATaGCGGTGCAGAAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: NLRGVELVPTYAAKWLTRRRGRR*RCRKGR
Trigger: CCGGCCCTTTCTGCACCGTCATCTCCTGCCCCGCCG...CCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268605.11
CDS-3UTR TCA 90 bp CGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCGGGCTGAGGACTGGATaGTGCTCGTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RALVASDSAPAASQVLSSGLRTG*CSWWAW
Trigger: CCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCC...GCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR TCA 90 bp GGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTAGGGCTGAGGACTGGATaGTGCTCGTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GESPGPVRPSGVYSLPAVGLRTG*CSWWAW
Trigger: CCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCC...TACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGAGGGTCATAGCTaGGGTCCCGGTAGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: RALVASDSAPAASQVLSSMEGHS*GPGSPD
Trigger: GTCCGGGCTACCGGGACCGCAGCTATGACCCTCCAT...GCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR GCA 90 bp ACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCCGCTCCTGCGCGTTaGCCATTGTCGGGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: TLRSLFTSSGTGLDRALVAAPAR*PLSGLD
Trigger: ATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGC...CACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCAACTCGGTGTCCTCCTaGCTCTCCAGACGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRYWAGPSLGGIRFSSSSNSVSS*LSRRSV
Trigger: GACAGAGCGTCTGGAGAGGCAGGAGGACACCGAGTT...GCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564053.5
ENST00000566871.5
CDS-3UTR GCA 90 bp CAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGAATGGAGGGTCATAGCTaGGGTCCCGGTAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: QVPSDPPEFIHFQRYWAGMEGHS*GPGSPA
Trigger: CGCAGGGCTACCGGGACCGCAGCTATGACCCTCCAT...TCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS-3UTR CCA 90 bp CTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGGCGCCCGCGGTACGCTaGGCACAGCGTAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRGTHPKFLGKQPESWREAPAVR*AQRSSS
Trigger: GGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGC...CTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWPVAWA*RVIAAV
Trigger: GACCGCAGCTATGACCCTCCATGCCCAGGCCACTGG...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCACCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: TSSGTGLDRALVASDSAPPVAWA*RVIAAV
Trigger: GACCGCAGCTATGACCCTCCATGCCCAGGCCACTGG...TGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCAGGGTCTGAAGCTCTaGGCAACCCGGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: RSRPTLRSLFTSSGTGLDQGLKL*ATRGMW
Trigger: CCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTG...GTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGCTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWLSFQL*LWLLRG
Trigger: ACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAG...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCCTCCAGTTCCGGCTCTaGTTCTGCTTCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: FQRYWAGPSLGGIRFSSSLQFRL*FCFSLG
Trigger: CCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAG...GCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGCTCTGGGTCCGGTTCTaGCTCCAGTTCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PKFLGKQPESWREPRSRPLWVRF*LQFRLW
Trigger: CCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAG...CGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RAQVPSDPPEFIHFQRYWRSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...CCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HPIQLQQHPRSYPAWAGHGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...GTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CCA 90 bp GGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GTGLDRALVASDSAPAASGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...GGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: TGLDRALVASDSAPAASQGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...CTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCACCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TSSGTGLDRALVASDSAPPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...TGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGCACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGPVRPSGVYSLPAVLGWHFQRY*AGPSLG
Trigger: ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTG...CCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCACACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGTGLDRALVASDSAPAAHFQRY*AGPSLG
Trigger: ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTG...TGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCCTGCCCAGGTCCCTaGGACTCAGAGGTACCCACC +
Preference number: 4 (lower is better)
Translates to: TLRSLFTSSGTGLDRALVACPGP*DSEVPT
Trigger: GGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC...CACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGCCTGCCCAGGTCCCTaGGACTCAGAGGTACCCACC +
Preference number: 4 (lower is better)
Translates to: DPPEFIHFQRYWAGPSLGACPGP*DSEVPT
Trigger: GGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC...ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTGCTCACCAGGGGAAATaGGTTGTGTATGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSSSSIPGPIQHGRGTACAHQGK*VVYAGR
Trigger: CCTGCCCGCATACACAACCCATTTCCCCTGGTGAGC...ACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR TCA 90 bp GTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTGGCCTCGTCAGGGTCTaGAGCTCTGGGCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: VYSLPAVLGWTEPWWHPIGLVRV*SSGQPG
Trigger: CCCGGGTTGCCCAGAGCTTCAGACCCTGACGAGGCC...AATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR TCA 90 bp ACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGGGCTGAGGACTGGATaGTGCTCGTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TLRSLFTSSGTGLDRALVGLRTG*CSWWAW
Trigger: CCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCC...CACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CTTCCCAAGGCTGTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGG +
Preference number: 4 (lower is better)
Translates to: LPKAVSSKPSLCGEKSPSSDGRS*ALPIVG
Trigger: CCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGA...GGAGGGTGACTTCTCTCCACATAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp CCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCTCGGCATCAGGCAGTaGATCCAATGCCTCGTACTC +
Preference number: 4 (lower is better)
Translates to: PAVLGWTEPWWHPIQLQQLGIRQ*IQCLVL
Trigger: GAGTACGAGGCATTGGATGCACTGCCTGATGCCGAG...CTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp ACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGATGGAGGGTCATAGCTaGGGTCCCGGTAGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: TLRSLFTSSGTGLDRALVMEGHS*GPGSPD
Trigger: GTCCGGGCTACCGGGACCGCAGCTATGACCCTCCAT...CACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564053.5
CDS-3UTR GCA 90 bp ACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGATCCGGGGTCCCGGATTaGACCGCCTCGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TYAAKWLTRGNGLCMRAGSGVPD*TASEPS
Trigger: TGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGA...TCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCTTCCGGCTCTGGTTCTaGTTCAGCCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FQRYWAGPSLGGIRFSSSFRLWF*FSLGFQ
Trigger: CTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAA...GCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCTTCCGGCTCTGGTTCTaGTTCAGCCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PSDPPEFIHFQRYWAGPSFRLWF*FSLGFQ
Trigger: CTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAA...GCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CTGGATGATGCTCGTGGTGGGCTTGGGCCTGCCCAGGTCCCTGGGACTCAGAGGGCTGGTACCTACATATaGTGCCAAGTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LDDARGGLGPAQVPGTQRAGTYI*CQVAHQ
Trigger: CTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGC...CCTCTGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCATCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp AGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCGCCGCTCCTGCGCGTTaGCCATTGTCGGGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: RGTHPKFLGKQPESWREPAAPAR*PLSGLD
Trigger: ATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGC...GGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: RIVERAQVPSDPPEFIHFQCLVL*PGEHAP
Trigger: CGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTG...GAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: NSQNRGESPGPVRPSGVYRRPVA*AWRVIA
Trigger: AGCTATGACCCTCCATGCCCAGGCCACTGGACGCCG...ATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCTCCAGTTCCGGCTCTaGTTCTGCTTCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWLQFRL*FCFSLG
Trigger: CCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAG...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGCGCCTGTCAGAGCTCTaGCCTTCAGGAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LGWTEPWWHPIQLQQHPRRLSEL*PSGIFG
Trigger: TCCGAAGATTCCTGAAGGCCAGAGCTCTGACAGGCG...CCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PEFIHFQRYWAGPSLGGIRSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...GATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTGTGTATGCGGGCAGGAGGGTCAGGTCCTTGTCCCACTAGGGGGCTAGGTTTGAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LCMRAGGSGPCPTRGLGLRSYPA*AGHRLS
Trigger: TGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCT...CAAACCTAGCCCCCTAGTGGGACAAGGACCTGACCCTCCTGCCCGCATACACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPVRPSGVYSLPAVLGWWTEPW*HPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCA...CCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRSRPTLRSLFTSSGTGLWTEPW*HPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCA...CAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPAVLGWTEPWWHPIQLQWTEPW*HPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCA...CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: NSQNRGESPGPVRPSGVYPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...ATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGCACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWHFQRY*AGPSLG
Trigger: ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTG...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCGCTCACCAGGGGAAATaGGTTGTGTATGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSDPPEFIHFQRYWAGPSAHQGK*VVYAGR
Trigger: CCTGCCCGCATACACAACCCATTTCCCCTGGTGAGC...GCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTGTCCCTCCAATCGGTaGGCAAAGGAAGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VERAQVPSDPPEFIHFQRCPSNR*AKEGRG
Trigger: CCCTCTCCCTTCCTTTGCCCACCGATTGGAGGGACA...CCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS-3UTR CCA 90 bp TCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCGCAAGCACAGGACCTaGAGGCCAACACGGGGAACT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGWTEPWWHPIQLRKHRT*RPTRGT
Trigger: AGTTCCCCGTGTTGGCCTCCAGGTCCTGTGCTTGCG...GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
CDS-3UTR TCA 90 bp CTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCACTTCCCAAGGCTGTaGGCTCTAAGCCCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: LPAVLGWTEPWWHPIQLQHFPRL*ALSPPY
Trigger: ATAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAGTG...CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp GTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGG +
Preference number: 4 (lower is better)
Translates to: VGLSWYLHMLPSGSPGEMSDGRS*ALPIVG
Trigger: CCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGA...CATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TGCTCCCCTCTTCTAGTCTCACTTCCCAAGGCTGTGAGCTCTAAGCCCTCCCTAAGTCCCGAGTCCGCCTaGAGCGTCTCGACCAGGCGT +
Preference number: 4 (lower is better)
Translates to: CSPLLVSLPKAVSSKPSLSPESA*SVSTRR
Trigger: ACGCCTGGTCGAGACGCTGCAGGCGGACTCGGGACT...TAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAGTGAGACTAGAAGAGGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWRQCIQ*LVLWPG
Trigger: ACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCT...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCCTCGGCATCAGGCAGTaGATCCAATGCCTCGTACTC +
Preference number: 4 (lower is better)
Translates to: VLGWTEPWWHPIQLQQHPLGIRQ*IQCLVL
Trigger: GAGTACGAGGCATTGGATGCACTGCCTGATGCCGAG...GGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTGTAGGCGGCGCACCCTaGGCTCGGCATCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ELVPTYAAKWLTRGNGLCVGGAP*ARHQAV
Trigger: CACTGCCTGATGCCGAGCGCAGGGTGCGCCGCCTAC...ACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGGGTACCTACATATGCTaGCAAGTGGCTCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: VPSDPPEFIHFQRYWAGPGTYIC*QVAHQG
Trigger: CCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC...CGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp ACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGGTACCTACATATGCTaGCAAGTGGCTCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGLDRALVASDSAPAASQGTYIC*QVAHQG
Trigger: CCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC...CTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTGGTACCTACATATGCTaGCAAGTGGCTCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: WAGPSLGGIRFSSSSIPGGTYIC*QVAHQG
Trigger: CCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC...ACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGACAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: TYAAKWLTRGNGLCMRAGQCLVL*PGEHAP
Trigger: CGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTG...TCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGTCCCTGGGACTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: GPWDSEVPTLSSWANSQNRRPVA*AWRVIA
Trigger: AGCTATGACCCTCCATGCCCAGGCCACTGGACGCCG...ATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCCCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: YSLPAVLGWTEPWWHPIQRRPVA*AWRVIA
Trigger: AGCTATGACCCTCCATGCCCAGGCCACTGGACGCCG...CTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTGCCTCCGGCGTCCAGTaGCCTGGGCATGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ELVPTYAAKWLTRGNGLCASGVQ*PGHGGS
Trigger: TGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGC...ACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCAGGGTCTGAAGCTCTaGGCAACCCGGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: YSLPAVLGWTEPWWHPIQQGLKL*ATRGMW
Trigger: CCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTG...CTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GLSWYLHMLPSGSPGEMGFQLWL*LLRGPG
Trigger: TCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAA...ACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCTTCCAGCTCTGGCTCTaGCTCCGGCTCCGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RGTHPKFLGKQPESWREPFQLWL*LRLRFS
Trigger: GCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAA...GGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCATTCCAGCTCTGGCTCTaGCTCCGGCTCCGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: NRGESPGPVRPSGVYSLPFQLWL*LRLRFS
Trigger: GCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAA...TGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCACTCTGGGTCCGGTTCTaGCTCCAGTTCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: NRGESPGPVRPSGVYSLPLWVRF*LQFRLW
Trigger: CCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAG...TGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGACCGAGCCTTGGTaGCATCCGATTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWWTEPW*HPIQLQ
Trigger: CTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCA...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCGGCTGGACCGAGCCTTaGTGGCATCCGATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ESWREPRSRPTLRSLFTSGWTEP*WHPIQL
Trigger: GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCC...GGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCCACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ESWREPRSRPTLRSLFTSHFQRY*AGPSLG
Trigger: ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTG...GGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: GTGLDRALVASDSAPAASKQPES*REPRSR
Trigger: ACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTT...GGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: RPTLRSLFTSSGTGLDRAKQPES*REPRSR
Trigger: ACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTT...GGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PGPVRPSGVYSLPAVLGWKQPES*REPRSR
Trigger: ACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTT...CCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGCCTGCCCAGGTCCCTaGGACTCAGAGGTACCCACC +
Preference number: 4 (lower is better)
Translates to: NLRGVELVPTYAAKWLTRACPGP*DSEVPT
Trigger: GGTGGGTACCTCTGAGTCCCAGGGACCTGGGCAGGC...CCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCTCACCAGGGGAAATaGGTTGTGTATGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSGTGLDRALVASDSAPAHQGK*VVYAGR
Trigger: CCTGCCCGCATACACAACCCATTTCCCCTGGTGAGC...TGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGAGCTCACCAGGGGAAATaGGTTGTGTATGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QVPSDPPEFIHFQRYWAGAHQGK*VVYAGR
Trigger: CCTGCCCGCATACACAACCCATTTCCCCTGGTGAGC...TCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTGCGTGGGGTTGAGCTaGTACCTACATATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LGWTEPWWHPIQLQQHPRCVGLS*YLHMLP
Trigger: TGGCAGCATATGTAGGTACCAGCTCAACCCCACGCA...CCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCTACTCTTATGCCTCTaGCACCTCGGAGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FSSSSIPGPIQHGRGTACLLLCL*HLGAFA
Trigger: AGCAAAGGCTCCGAGGTGCCAGAGGCATAAGAGTAG...ACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS-3UTR CCA 90 bp CCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGCAAGCACAGGACCTaGAGGCCAACACGGGGAACT +
Preference number: 4 (lower is better)
Translates to: PEFIHFQRYWAGPSLGGIRKHRT*RPTRGT
Trigger: AGTTCCCCGTGTTGGCCTCCAGGTCCTGTGCTTGCG...GATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
CDS-3UTR TCA 90 bp TGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCCTCTTCTAGTCTCACTTCCGGCCTCGTCAGGGTCTaGAGCTCTGGGCAACCCGGG +
Preference number: 4 (lower is better)
Translates to: WPLSTQGPFLLPSSSLTSGLVRV*SSGQPG
Trigger: CCCGGGTTGCCCAGAGCTTCAGACCCTGACGAGGCC...GGAAGTGAGACTAGAAGAGGGGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR TCA 90 bp CGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCGAACTTGCGTGGGGTTaGGCTGGTACCTACATATGC +
Preference number: 4 (lower is better)
Translates to: RPTLRSLFTSSGTGLDRAELAWG*AGTYIC
Trigger: GCATATGTAGGTACCAGCTCAACCCCACGCAAGTTC...GGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp ATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: IHFQRYWAGPSLGGIRFSRQCIQ*LVLWPG
Trigger: ACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCT...GCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCTCGGCATCAGGCAGTaGATCCAATGCCTCGTACTC +
Preference number: 4 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWLGIRQ*IQCLVL
Trigger: GAGTACGAGGCATTGGATGCACTGCCTGATGCCGAG...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGAAGTCACCCTCCCCTTaGTCCATGTTCAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGPVRPSGVYSLPAVLGWKSPSP*SMFSSG
Trigger: TCCTGAGCTGAACATGGAGCAAGGGGAGGGTGACTT...CCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp TCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATATGGAGGGTCATAGCTaGGGTCCCGGTAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGVYSLPAVLGWTEPWWHMEGHS*GPGSVL
Trigger: CAGCACGCTACCGGGACCGCAGCTATGACCCTCCAT...ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS-3UTR CCA 90 bp GTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGCAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCG +
Preference number: 4 (lower is better)
Translates to: VPTYAAKWLTRGNGLCMRQCLVL*PGEHAP
Trigger: CGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTG...CCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTC +
Preference number: 4 (lower is better)
Translates to: VGLSWYLHMLPSGSPGEMPVAWA*RVIAAV
Trigger: GACCGCAGCTATGACCCTCCATGCCCAGGCCACTGG...CATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: VYSLPAVLGWTEPWWHPIRRPVA*AWRVIA
Trigger: AGCTATGACCCTCCATGCCCAGGCCACTGGACGCCG...AATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCTCCAGTTCCGGCTCTaGTTCTGCTTCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VPTLSSWANSQNRGESPGLQFRL*FCFSLG
Trigger: CCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAG...ACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCCCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGT +
Preference number: 4 (lower is better)
Translates to: FQRYWAGPSLGGIRFSSSPTLSS*ANSQNR
Trigger: ACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGG...GCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp ATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCCCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGT +
Preference number: 4 (lower is better)
Translates to: IRFSSSSIPGPIQHGRGTPTLSS*ANSQNR
Trigger: ACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGG...GGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CCA 90 bp GGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGT +
Preference number: 4 (lower is better)
Translates to: GTGLDRALVASDSAPAASPTLSS*ANSQNR
Trigger: ACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGG...GGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGATTAGGGCTGAGGACTaGATGATGCTCGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PKFLGKQPESWREPRSRPIRAED*MMLVVG
Trigger: GCCCACCACGAGCATCATCCAGTCCTCAGCCCTAAT...CGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp GAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTGGGCTGAGGACTGGATaGTGCTCGTGGTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ELVPTYAAKWLTRGNGLCGLRTG*CSWWAW
Trigger: CCAAGCCCACCACGAGCATCATCCAGTCCTCAGCCC...ACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp GGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTAGAACTTGCGTGGGGTTaGGCTGGTACCTACATATGC +
Preference number: 4 (lower is better)
Translates to: GESPGPVRPSGVYSLPAVELAWG*AGTYIC
Trigger: GCATATGTAGGTACCAGCTCAACCCCACGCAAGTTC...TACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp GGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCTCCGCTTTCTTCAACTaGGTTTTCCAGAGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GLDRALVASDSAPAASQVSAFFN*VFQSVP
Trigger: AGGGACACTCTGGAAAACTCAGTTGAAGAAAGCGGA...GACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS-3UTR GCA 90 bp GTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTTTCCGGCTCTGGTTCTaGTTCAGCCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VPTLSSWANSQNRGESPGFRLWF*FSLGFQ
Trigger: CTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAA...ACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp ACCCTCCCCTTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTATTCCGGCTCTGGTTCTaGTTCAGCCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TLPLLHVQLRNLRGVELVFRLWF*FSLGFQ
Trigger: CTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAA...TACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp GTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTGCTGGTACCTACATATaGTGCCAAGTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: VRPSGVYSLPAVLGWTEPAGTYI*CQVAHQ
Trigger: CTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGC...AGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGAAGTCACCCTCCCCTTaGTCCATGTTCAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWKSPSP*SMFSSG
Trigger: TCCTGAGCTGAACATGGAGCAAGGGGAGGGTGACTT...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp TCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATAACTCGGTGTCCTCCTaGCTCTCCAGACGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SGVYSLPAVLGWTEPWWHNSVSS*LSRRSV
Trigger: GACAGAGCGTCTGGAGAGGCAGGAGGACACCGAGTT...ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564053.5
ENST00000566871.5
CDS-3UTR GCA 90 bp TTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGTCCCGGTAGCGTGCTaGCAGTCCCAAGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLHVQLRNLRGVELVPTYVPVAC*QSQAGS
Trigger: GGACCCCGCTTGGGACTGGCAGCACGCTACCGGGAC...ATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS-3UTR CCA 90 bp CTAGTCTCACTTCCCAAGGCTGTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGCAGGGTCTGAAGCTCTaGGCAACCCGGGGCATGTGG +
Preference number: 4 (lower is better)
Translates to: LVSLPKAVSSKPSLCGEKQGLKL*ATRGMW
Trigger: CCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTG...CTTCTCTCCACATAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAGTGAGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp AAGTCACTGGTCAGAATCCTCACTGAGCTCCCAGTCCAGAGAGAAGCCAGACAATTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KSLVRILTELPVQREARQFQLWL*LLRGPG
Trigger: TCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAA...TTGTCTGGCTTCTCTCTGGACTGGGAGCTCAGTGAGGATTCTGACCAGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp GGACTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGACTCCAGTTCCGGCTCTaGTTCTGCTTCAGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GLRGTHPKFLGKQPESWRLQFRL*FCFSLG
Trigger: CCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAG...TCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TCACTGGTCAGAATCCTCACTGAGCTCCCAGTCCAGAGAGAAGCCAGACAATTAGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVRILTELPVQREARQLVGLGL*VRFWLQ
Trigger: CTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGAC...TAATTGTCTGGCTTCTCTCTGGACTGGGAGCTCAGTGAGGATTCTGACCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp TATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGGGCGCCTGTCAGAGCTCTaGCCTTCAGGAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: YAAKWLTRGNGLCMRAGGRLSEL*PSGIFG
Trigger: TCCGAAGATTCCTGAAGGCCAGAGCTCTGACAGGCG...CCCTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCCCACCCTAAGTTCCTaGGCAAACAGCCAGAATCGT +
Preference number: 4 (lower is better)
Translates to: SLPAVLGWTEPWWHPIQLPTLSS*ANSQNR
Trigger: ACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGG...GAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGATGCGTGGGGTTGAGCTaGTACCTACATATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QVPSDPPEFIHFQRYWAGCVGLS*YLHMLP
Trigger: TGGCAGCATATGTAGGTACCAGCTCAACCCCACGCA...TCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGTGTCCCAAGGGCTGGTaGTTCCTTCTTCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWCPKGW*FLLLCT
Trigger: GGTACACAGAAGAAGGAACCACCAGCCCTTGGGACA...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564053.5
3UTR CAA 72 bp TTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LFTSSGTGLDRA*VASDSAPAASQ
Trigger: CTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
3UTR CAA 72 bp ACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTaGTGTATGCGGGCAGGAGGGTCAGGTCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TYAAKWLTRGNG*CMRAGGSGPCP
Trigger: GGGACAAGGACCTGACCCTCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp TCACTGGTCAGAATCCTCACTGAGCTCCCAGTCCAGAGAGAAGCCAGACAATTAGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTT +
Preference number: 4 (lower is better)
Translates to: SLVRILTELPVQREARQLAVDSL*RPLLRV
Trigger: AACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGC...TAATTGTCTGGCTTCTCTCTGGACTGGGAGCTCAGTGAGGATTCTGACCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp ACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCCTCTTCTGGTGGGCTTGGGCCTaGCCAGGTCCCTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: TMMCVAFVYSRSLSAPLFWWAWA*PGPWDS
Trigger: TGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCA...GAAGAGGGGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCRRPVA*AWRVIA
Trigger: AGCTATGACCCTCCATGCCCAGGCCACTGGACGCCG...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCCTCTTCTAGTCTCACTTCCCTCTGGGTCCGGTTCTaGCTCCAGTTCCGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPLSTQGPFLLPSSSLTSLWVRF*LQFRLW
Trigger: CCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAG...GGAAGTGAGACTAGAAGAGGGGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp TATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCGCCTGTCAGAGCTCTaGCCTTCAGGAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: YSLPAVLGWTEPWWHPIQRLSEL*PSGIFG
Trigger: TCCGAAGATTCCTGAAGGCCAGAGCTCTGACAGGCG...CTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CTCCCCTTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTATTAGGGCTGAGGACTaGATGATGCTCGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPLLHVQLRNLRGVELVPIRAED*MMLVVG
Trigger: GCCCACCACGAGCATCATCCAGTCCTCAGCCCTAAT...AGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp AATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAATTAGGGCTGAGGACTaGATGATGCTCGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NRGESPGPVRPSGVYSLPIRAED*MMLVVG
Trigger: GCCCACCACGAGCATCATCCAGTCCTCAGCCCTAAT...TGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR TCA 90 bp AGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCGAACTTGCGTGGGGTTaGGCTGGTACCTACATATGC +
Preference number: 4 (lower is better)
Translates to: RIVERAQVPSDPPEFIHFELAWG*AGTYIC
Trigger: GCATATGTAGGTACCAGCTCAACCCCACGCAAGTTC...GAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TGCTCCCCTCTTCTAGTCTCACTTCCCAAGGCTGTGAGCTCTAAGCCCTCCCTACTCGGCATCAGGCAGTaGATCCAATGCCTCGTACTC +
Preference number: 4 (lower is better)
Translates to: CSPLLVSLPKAVSSKPSLLGIRQ*IQCLVL
Trigger: GAGTACGAGGCATTGGATGCACTGCCTGATGCCGAG...TAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAGTGAGACTAGAAGAGGGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp GGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGTTCCGGCTCTGGTTCTaGTTCAGCCTCGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: GTYICCQVAHQGKWVVYAFRLWF*FSLGFQ
Trigger: CTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAA...CGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp ACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGGGCAGGAGGTACCTACATATGCTaGCAAGTGGCTCACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TYAAKWLTRGNGLCMRAGGTYIC*QVAHQG
Trigger: CCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC...TCCTGCCCGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GGACTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGATGGCATCTACTCTTATaGCTCTGGCACCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GLRGTHPKFLGKQPESWRWHLLL*LWHLGA
Trigger: GGCTCCGAGGTGCCAGAGGCATAAGAGTAGATGCCA...TCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS-3UTR GCA 90 bp GGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGATGGAGGGTCATAGCTaGGGTCCCGGTAGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GTYICCQVAHQGKWVVYAMEGHS*GPGSLD
Trigger: ATCGAGGCTACCGGGACCGCAGCTATGACCCTCCAT...CGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563258.1
CDS-3UTR CCA 90 bp GTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCGCCTGTCAGAGCTCTaGCCTTCAGGAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: VYSLPAVLGWTEPWWHPIRLSEL*PSGIFG
Trigger: TCCGAAGATTCCTGAAGGCCAGAGCTCTGACAGGCG...AATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CCA 90 bp TTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATCCAGCGGTACTGGGCTaGACCGAGCCTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLHVQLRNLRGVELVPTYPAVLG*TEPWWH
Trigger: ATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGG...ATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTCACTTCCAGCGGTACTaGGCTGGACCGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCHFQRY*AGPSLG
Trigger: ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTG...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp GGACTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAATTAGGGCTGAGGACTaGATGATGCTCGTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GLRGTHPKFLGKQPESWRIRAED*MMLVVG
Trigger: GCCCACCACGAGCATCATCCAGTCCTCAGCCCTAAT...TCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCCTCTTCTAGTCAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: DVCGLCLLKVPFCSPLLVRQCIQ*LVLWPG
Trigger: ACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCT...GACTAGAAGAGGGGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCRQCIQ*LVLWPG
Trigger: ACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCT...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp AACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGCTGGTACCTACATATaGTGCCAAGTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: NLRGVELVPTYAAKWLTRAGTYI*CQVAHQ
Trigger: CTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGC...CCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp GGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTGCTGGTACCTACATATaGTGCCAAGTGGCTCACCAG +
Preference number: 4 (lower is better)
Translates to: GLSWYLHMLPSGSPGEMGAGTYI*CQVAHQ
Trigger: CTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGC...ACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR GCA 90 bp TGCTCCCCTCTTCTAGTCTCACTTCCCAAGGCTGTGAGCTCTAAGCCCTCCCTATTCAGCTCAGGAACTTaGGTGGGGTTGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: CSPLLVSLPKAVSSKPSLFSSGT*VGLSWY
Trigger: GTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAA...TAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAGTGAGACTAGAAGAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp CATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCCGCCTGTCAGAGCTCTaGCCTTCAGGAATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: HVQLRNLRGVELVPTYAARLSEL*PSGIFG
Trigger: TCCGAAGATTCCTGAAGGCCAGAGCTCTGACAGGCG...GGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp CCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGTTTTGTGTAAGTCACTaGTCAGAATCCTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: PVRPSGVYSLPAVLGWTEFCVSH*SESSLS
Trigger: GCTCAGTGAGGATTCTGACCAGTGACTTACACAAAA...CTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
3UTR CAA 72 bp CCTTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTaGAGCTGGTACCTACATATGCTGCCAAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PCSMFSSGTCVG*SWYLHMLPSGS
Trigger: TGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp GGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTATGCGTGCGTGGGGTTGAGCTaGTACCTACATATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GTYICCQVAHQGKWVVYACVGLS*YLHMLP
Trigger: TGGCAGCATATGTAGGTACCAGCTCAACCCCACGCA...CGCATACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTGCCTTTCCCAGGACTaGCATCTACTCTTATGCCTC +
Preference number: 4 (lower is better)
Translates to: SSGTCVGLSWYLHMLPSGCLSQD*HLLLCL
Trigger: GAGGCATAAGAGTAGATGCCAGTCCTGGGAAAGGCA...GCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS-3UTR GCA 90 bp TTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTTTCAGCTCAGGAACTTaGGTGGGGTTGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LSWYLHMLPSGSPGEMGCFSSGT*VGLSWY
Trigger: GTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAA...ACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CCA 90 bp AAAACAGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCCTCCGGCGTCCAGTaGCCTGGGCATGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KTVMTMMCVAFVYSRSLSASGVQ*PGHGGS
Trigger: TGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGC...AGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp GAGAGAAGCCAGACAATTAAAACAGTAATGACAATGATGTGTGTGGCCTTTGTCTGGTGGGCTTGGGCCTaGCCAGGTCCCTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: ERSQTIKTVMTMMCVAFVWWAWA*PGPWDS
Trigger: TGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCA...GACAAAGGCCACACACATCATTGTCATTACTGTTTTAATTGTCTGGCTTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR TCA 90 bp AGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCCACTTCCCAAGGCTGTaGGCTCTAAGCCCTCCCTAT +
Preference number: 4 (lower is better)
Translates to: SNDNDVCGLCLLKVPFCSHFPRL*ALSPPY
Trigger: ATAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAGTG...GGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp AGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTGCTCCAAACAGCCAGAATCGTaGAGAGAGCCCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SNDNDVCGLCLLKVPFCSKQPES*REPRSR
Trigger: ACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTT...GGAGCAGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR CCA 90 bp GAGCTGGTACCTACATATGCTGCCAAGTGGCTCACCAGGGGAAATGGGTTGTGTTTTTGTGTAAGTCACTaGTCAGAATCCTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: ELVPTYAAKWLTRGNGLCFCVSH*SESSLS
Trigger: GCTCAGTGAGGATTCTGACCAGTGACTTACACAAAA...ACACAACCCATTTCCCCTGGTGAGCCACTTGGCAGCATATGTAGGTACCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp AAAACAGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGTCCCTTTCTTTCAGCTCAGGAACTTaGGTGGGGTTGAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KTVMTMMCVAFVYSRSLSFSSGT*VGLSWY
Trigger: GTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAA...AGAAAGGGACCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp GAGAGAAGCCAGACAATTAAAACAGTAATGACAATGATGTGTGTGGCCTTTGTCCTCAAGGTCCCTTTCTaGTCCCCTCTTCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: ERSQTIKTVMTMMCVAFVLKVPF*SPLLVS
Trigger: TGAGACTAGAAGAGGGGAGCAGAAAGGGACCTTGAG...GACAAAGGCCACACACATCATTGTCATTACTGTTTTAATTGTCTGGCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS-3UTR GCA 90 bp CAGACAATTAAAACAGTAATGACAATGATGTGTGTGGCCTTTGTCTACTCAAGGCTCAAGGTCCCTTTCTaGTCCCCTCTTCTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QTIKTVMTMMCVAFVYSRLKVPF*SPLLVS
Trigger: TGAGACTAGAAGAGGGGAGCAGAAAGGGACCTTGAG...CCTTGAGTAGACAAAGGCCACACACATCATTGTCATTACTGTTTTAATTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS CCA 90 bp GCGTGCTGCCAGTCCCAAGCGGGGTCCGGCGCGCCCGCGGTACGCTaGGCACAGCGTAGCAGCTCCTGGCAGGCGGCCTCGCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: ACCQSQAGSGAPAVR*AQRSSSWQAASPLP
Trigger: GGGCAAGGGCGAGGCCGCCTGCCAGGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGCGCCGGACCCCGCTTGGGACTGGCAGCACGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS CCA 90 bp GGGTCCGGCGCGCCCGCGGTACGCTGGGCACAGCGTAGCAGCTCCTaGCAGGCGGCCTCGCCCTTGCCCTGCACCAGCAGCAGTAGGCGG +
Preference number: 5 (lower is better)
Translates to: GSGAPAVRWAQRSSS*QAASPLPCTSSSRR
Trigger: CCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGCCGCCTGCCAGGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGCGCCGGACCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp ACGTGCTGCCAGTCCCAAGCGGGGTCCGGCGCGCCCGCGGTACGCTaGGCACAGCGTAGCAGCTCCTGGCAGGCGGCCTCGCCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: TCCQSQAGSGAPAVR*AQRSSSWQAASPLP
Trigger: GGGCAAGGGCGAGGCCGCCTGCCAGGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGCGCCGGACCCCGCTTGGGACTGGCAGCACGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568503.1
CDS CCA 90 bp GGGGCATGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCTGCGGTCCCGGTAGCCCGGACCCAC +
Preference number: 5 (lower is better)
Translates to: GACGPRAGCLRRPVA*AWRVIAAVPVARTH
Trigger: GTGGGTCCGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACATGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
CDS CCA 90 bp GGGGCATGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCTGCGGTCCCGGTAGCCCTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: GACGPRAGCLRRPVA*AWRVIAAVPVALRS
Trigger: CGAGCGCAGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACATGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS GCA 90 bp TGGGCACAGCGTAGCAGCTCCTGGCAGGCGGCCTCGCCCTTGCCCTaGACCAGCAGCAGTAGGCGGCGCACCCTGCGCTCGGCATCAGGC +
Preference number: 5 (lower is better)
Translates to: WAQRSSSWQAASPLP*TSSSRRRTLRSASG
Trigger: GCCTGATGCCGAGCGCAGGGTGCGCCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGCCGCCTGCCAGGAGCTGCTACGCTGTGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 90 bp GCCTCAGCTTCCAGCTCTGGCTCTGGCTCCTCCGGGGTCCCGGATTaGACCGCCTCGGAGCCCTCAGGGCCCCCGGCCTCGTCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: ASASSSGSGSSGVPD*TASEPSGPPASSGS
Trigger: AGACCCTGACGAGGCCGGGGGCCCTGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp TGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCCGGACCCACGTGCTG +
Preference number: 5 (lower is better)
Translates to: CGPRAGCLRRPVAWA*RVIAAVPVARTHVL
Trigger: CAGCACGTGGGTCCGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
CDS CCA 90 bp TGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCTCGATCCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: CGPRAGCLRRPVAWA*RVIAAVPVASIPAA
Trigger: GGCGGCTGGGATCGAGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563258.1
CDS CCA 90 bp GGGGCATGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCTGCGGTCCCGGTAGCGTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GACGPRAGCLRRPVA*AWRVIAAVPVACCQ
Trigger: CTGGCAGCACGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACATGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS CCA 90 bp TGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCTGGGGCGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: CGPRAGCLRRPVAWA*RVIAAVPVAWGGSG
Trigger: CCCACTTCCGCCCCAGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568503.1
CDS GCA 90 bp TGCGGTCCCGGTAGCCCTGCGCTCGGCATCAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGTGAGCACGCCCCGCGCCAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: CGPGSPALGIRQCIQ*LVLWPGEHAPRQQR
Trigger: GCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGCTACCGGGACCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS CCA 90 bp GGGGCATGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCTGCGGTCCCGGTAGCCTCGATCCCA +
Preference number: 5 (lower is better)
Translates to: GACGPRAGCLRRPVA*AWRVIAAVPVASIP
Trigger: TGGGATCGAGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACATGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563258.1
CDS CCA 90 bp TGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCCTGCGCTCGGCATCA +
Preference number: 5 (lower is better)
Translates to: CGPRAGCLRRPVAWA*RVIAAVPVALRSAS
Trigger: TGATGCCGAGCGCAGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS GCA 90 bp ACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGGGCTCGATCCCAGCCGCCGGACGGC +
Preference number: 5 (lower is better)
Translates to: TRRFRSRSIVSDGRS*ALPIVGARSQPPDG
Trigger: GCCGTCCGGCGGCTGGGATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp CGGGGCTCGATCCCAGCCGCCGGACGGCTCCGCAAGCACAGGACCTaGAGGCCAACACGGGGAACTCGGTGTCCTCCTGCCTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RGSIPAAGRLRKHRT*RPTRGTRCPPASPD
Trigger: GTCTGGAGAGGCAGGAGGACACCGAGTTCCCCGTGTTGGCCTCCAGGTCCTGTGCTTGCGGAGCCGTCCGGCGGCTGGGATCGAGCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000566871.5
ENST00000568503.1
CDS CCA 90 bp TGTGGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCGTGCTGCCAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: CGPRAGCLRRPVAWA*RVIAAVPVACCQSQ
Trigger: TTGGGACTGGCAGCACGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS-3UTR CAA 90 bp CTGGGCAAACAGCCAGAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGCTCCGGGGTCCCGGATaGCACCGCCTCGGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LGKQPESWREPRSRPTLRLRGPG*HRLGAL
Trigger: GAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAG...CCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTCTGGCTGTTTGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS GCA 90 bp ACGCCCCGCGCCAGCAGCGCGTCCAACAGCAGTCCCGAGTCCGCCTaGAGCGTCTCGACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCT +
Preference number: 5 (lower is better)
Translates to: TPRASSASNSSPESA*SVSTRRFRSRSIVS
Trigger: AGAGACTATCGACCGCGAGCGGAAACGCCTGGTCGAGACGCTGCAGGCGGACTCGGGACTGCTGTTGGACGCGCTGCTGGCGCGGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 90 bp CGGCCTCGCCCTTGCCCTGCACCAGCAGCAGTAGGCGGCGCACCCTaGGCTCGGCATCAGGCAGTGCATCCAATGCCTCGTACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RPRPCPAPAAVGGAP*ARHQAVHPMPRTLA
Trigger: GGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGTGCGCCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp CACCCTGCGCTCGGCATCAGGCAGTGCATCCAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCGCGCCAGCAGCGCGTCCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: HPALGIRQCIQCLVL*PGEHAPRQQRVQQQ
Trigger: CTGCTGTTGGACGCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp AGCCCTGCGCTCGGCATCAGGCAGTGCATCCAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCGCGCCAGCAGCGCGTCCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SPALGIRQCIQCLVL*PGEHAPRQQRVQQQ
Trigger: CTGCTGTTGGACGCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS-3UTR CAA 90 bp GCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTGGCCCCTGCGCGTTGCCCATaGTCGGGGCTCGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: ASQVLSSMGGAPPVRALAPARCP*SGLDPS
Trigger: GCTGGGATCGAGCCCCGACAATGGGCAACGCGCAGG...GGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS TCA 90 bp GCTCGGCATCAGGCAGTGCATCCAATGCCTCGTACTCTGGCCCGGTaGGCACGCCCCGCGCCAGCAGCGCGTCCAACAGCAGTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: ARHQAVHPMPRTLAR*ARPAPAARPTAVPS
Trigger: ACTCGGGACTGCTGTTGGACGCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp CTCCGGCTCCGGTTCAGCCTCTTTAGAGGCCTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGTCCCGGATTGCACCGCCTCGGAGCC +
Preference number: 5 (lower is better)
Translates to: LRLRFSLFRGLSFQL*LWLLRGPGLHRLGA
Trigger: GGCTCCGAGGCGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGCCTCTAAAGAGGCTGAACCGGAGCCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS-3UTR CAA 90 bp AGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCACTCCGGGGTCCCGGATaGCACCGCCTCGGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: SGTGLDRALVASDSAPAALRGPG*HRLGAL
Trigger: GAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAG...TGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CAA 90 bp TTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTGGCCGCTCCTGCGCGTaGCCCATTGTCGGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: FSSSSIPGPIQHGRGTACGRSCA*PIVGAR
Trigger: TCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCC...ACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS TCA 90 bp CTGCAGCGTCTCGACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTTGCCCATTGTCGGGGCTCGATCCCA +
Preference number: 5 (lower is better)
Translates to: LQRLDQAFPLAVDSL*RPLLRVAHCRGSIP
Trigger: TGGGATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGTCGAGACGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp CTCCGGTTCAGCCTCTTTAGAGGCCTCAGCTTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGATTGCACCGCCTCGGAGCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LRFSLFRGLSFQLWL*LLRGPGLHRLGALR
Trigger: CCTGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGCCTCTAAAGAGGCTGAACCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS-3UTR CAA 90 bp GGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTCCGGGGTCCCGGATaGCACCGCCTCGGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GESPGPVRPSGVYSLPAVLRGPG*HRLGAL
Trigger: GAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAG...TACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTACTCCGGGGTCCCGGATaGCACCGCCTCGGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LDRALVASDSAPAASQVLLRGPG*HRLGAL
Trigger: GAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAG...TAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
CDS-3UTR CAA 90 bp GGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCATGCTCGTGGTGGGCTaGGGCCTGCCCAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GLDRALVASDSAPAASQVMLVVG*GLPRSL
Trigger: CAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCAT...GACCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCGGCCGCTCCTGCGCGTaGCCCATTGTCGGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: RYWAGPSLGGIRFSSSSIGRSCA*PIVGAR
Trigger: TCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCC...GATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS TCA 90 bp CTGCAGCGTCTCGACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTTGCCCATTGTCGGGGCAGGATCACA +
Preference number: 5 (lower is better)
Translates to: LQRLDQAFPLAVDSL*RPLLRVAHCRGRIT
Trigger: TGTGATCCTGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGTCGAGACGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565560.5
CDS-3UTR CAA 90 bp GAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCCTCCGGGGTCCCGGATaGCACCGCCTCGGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: ESWREPRSRPTLRSLFTSLRGPG*HRLGAL
Trigger: GAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAG...GGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGCCTGCGCGTTGCCCATaGTCGGGGCTCGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: PGPVRPSGVYSLPAVLGWPARCP*SGLDPS
Trigger: GCTGGGATCGAGCCCCGACAATGGGCAACGCGCAGG...CCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS CCA 90 bp CTCGTCCCTTTCCTCGAAGTCGGGCTCGGGCTCTGGGTCCGGTTCTaGCTCCAGTTCCGGCTCTGGTTCTGCTTCAGCCTCGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: LVPFLEVGLGLWVRF*LQFRLWFCFSLGFQ
Trigger: CTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGACTTCGAGGAAAGGGACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564860.1
ENST00000564992.1
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS-3UTR CAA 90 bp CTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGCTCCAGCAGCATCCCAGGGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: LGWTEPWWHPIQLQQHPRGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...CCTGGGATGCTGCTGGAGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CTGGATGATGCTCGTGGTGGGCTTGGGCCTGCCCAGGTCCCTGGGACTCAGAGGACTAGGGGGCTAGGTTaGGGATCTCCAGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LDDARGGLGPAQVPGTQRTRGLG*GSPGCS
Trigger: GCTGCACCCTGGAGATCCCAAACCTAGCCCCCTAGT...CCTCTGAGTCCCAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCATCATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS GCA 90 bp CAAGCACAGGACCTGGAGGCCAACACGGGGAACTCGGTGTCCTCCTaGCTCTCCAGACGCTCTGTCCTGTCTCCTCCTCAGGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QAQDLEANTGNSVSS*LSRRSVLSPPQAPP
Trigger: AGGAGGAGCCTGAGGAGGAGACAGGACAGAGCGTCTGGAGAGGCAGGAGGACACCGAGTTCCCCGTGTTGGCCTCCAGGTCCTGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS CCA 90 bp CTCCAGTTCCGGCTCTGGTTCTGCTTCAGCCTCGGGTTCCAGCTCTaGCTCTGGCTCCGGCTCCGGTTCAGCCTCTTTAGAGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LQFRLWFCFSLGFQL*LWLRLRFSLFRGLS
Trigger: GCTGAGGCCTCTAAAGAGGCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAACTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS-3UTR CAA 90 bp GAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCATGCTCGTGGTGGGCTaGGGCCTGCCCAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ESWREPRSRPTLRSLFTSMLVVG*GLPRSL
Trigger: CAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCAT...GGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp GACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTATGCTCGTGGTGGGCTaGGGCCTGCCCAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: DPPEFIHFQRYWAGPSLGMLVVG*GLPRSL
Trigger: CAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCAT...ACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS GCA 90 bp ACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGGGCAGGATCACAGAACGCATGCATT +
Preference number: 5 (lower is better)
Translates to: TRRFRSRSIVSDGRS*ALPIVGAGSQNACI
Trigger: AATGCATGCGTTCTGTGATCCTGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565560.5
CDS CCA 90 bp TTCCGGCTCTGGTTCTGCTTCAGCCTCGGGTTCCAGCTCTGGCTCTaGCTCCGGCTCCGGTTCAGCCTCTTTAGAGGCCTCAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FRLWFCFSLGFQLWL*LRLRFSLFRGLSFQ
Trigger: CTGGAAGCTGAGGCCTCTAAAGAGGCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAACCCGAGGCTGAAGCAGAACCAGAGCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp GGAATCTTCGGACTCGTCCCTTTCCTCGAAGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAGTTCCGGCTCTGGTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GIFGLVPFLEVGLGL*VRFWLQFRLWFCFS
Trigger: GCTGAAGCAGAACCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGACTTCGAGGAAAGGGACGAGTCCGAAGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS-3UTR CAA 90 bp AGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: RSRPTLRSLFTSSGTGLDGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...GTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CAA 90 bp GGTCCCTGGGACTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATATGCTCGTGGTGGGCTaGGGCCTGCCCAGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GPWDSEVPTLSSWANSQNMLVVG*GLPRSL
Trigger: CAGGGACCTGGGCAGGCCCAAGCCCACCACGAGCAT...ATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCCCAGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACTAGGGGGCTAGGTTaGGGATCTCCAGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGPVRPSGVYSLPAVLGWTRGLG*GSPGCS
Trigger: GCTGCACCCTGGAGATCCCAAACCTAGCCCCCTAGT...CCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CTTCCCAAGGCTGTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCCCTGCGCGTTGCCCATaGTCGGGGCTCGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: LPKAVSSKPSLCGEKSPSPARCP*SGLDPS
Trigger: GCTGGGATCGAGCCCCGACAATGGGCAACGCGCAGG...GGAGGGTGACTTCTCTCCACATAGGGAGGGCTTAGAGCTCACAGCCTTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS TCA 90 bp GAGGGTCATAGCTGCGGTCCCGGTAGCCTGGGGCGGAAGTGGGAGTaGCTGAGGCTCAATTTACCCCTGTGCGGTTTCACACTCGCCTAC +
Preference number: 5 (lower is better)
Translates to: EGHSCGPGSLGRKWE*LRLNLPLCGFTLAY
Trigger: GTAGGCGAGTGTGAAACCGCACAGGGGTAAATTGAGCCTCAGTCACTCCCACTTCCGCCCCAGGCTACCGGGACCGCAGCTATGACCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568503.1
CDS CCA 90 bp TGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCAGAGCTCTGGCCTTCAGGAATCTTC +
Preference number: 5 (lower is better)
Translates to: WHPIQLQQHPRSYPA*AGHRLSELWPSGIF
Trigger: GAAGATTCCTGAAGGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 90 bp AATACCTTCGGACTCGTCCCTTTCCTCGAAGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAGTTCCGGCTCTGGTTCTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: NTFGLVPFLEVGLGL*VRFWLQFRLWFCFS
Trigger: GCTGAAGCAGAACCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGACTTCGAGGAAAGGGACGAGTCCGAAGGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564860.1
CDS CCA 90 bp TGGCATCCGATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCAGAGCTCTGGCCTTCAGGAATACCT +
Preference number: 5 (lower is better)
Translates to: WHPIQLQQHPRSYPA*AGHRLSELWPSGIP
Trigger: AGGTATTCCTGAAGGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAATCGGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564860.1
CDS-3UTR CAA 90 bp GAATCGTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: ESWREPRSRPTLRSLFTSGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...GGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCACGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp ACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: TLRSLFTSSGTGLDRALVGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...CACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGACTAGGGGGCTAGGTTaGGGATCTCCAGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PSGVYSLPAVLGWTEPWWTRGLG*GSPGCS
Trigger: GCTGCACCCTGGAGATCCCAAACCTAGCCCCCTAGT...CCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGACCAGGGGAAATGGGTaGTGTATGCGGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RPSGVYSLPAVLGWTEPWTRGNG*CMRAGG
Trigger: CCCTCCTGCCCGCATACACAACCCATTTCCCCTGGT...CCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCGGCCGCTCCTGCGCGTaGCCCATTGTCGGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: HVQLRNLRGVELVPTYAAGRSCA*PIVGAR
Trigger: TCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCC...GGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTGAGCTCTAAGCCCTCCCTATGTGGAGAGAAGTCACCCTCCCCTACCAGGGGAAATGGGTaGTGTATGCGGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PKAVSSKPSLCGEKSPSPTRGNG*CMRAGG
Trigger: CCCTCCTGCCCGCATACACAACCCATTTCCCCTGGT...AGGGGAGGGTGACTTCTCTCCACATAGGGAGGGCTTAGAGCTCACAGCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS TCA 90 bp GTCATAGCTGCGGTCCCGGTAGCCTGGGGCGGAAGTGGGAGTGACTaGGGCTCAATTTACCCCTGTGCGGTTTCACACTCGCCTACTTCT +
Preference number: 5 (lower is better)
Translates to: VIAAVPVAWGGSGSD*GSIYPCAVSHSPTS
Trigger: AGAAGTAGGCGAGTGTGAAACCGCACAGGGGTAAATTGAGCCTCAGTCACTCCCACTTCCGCCCCAGGCTACCGGGACCGCAGCTATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568503.1
CDS-3UTR CAA 90 bp TATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCCGATTCAGACCAGGGGAAATGGGTaGTGTATGCGGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: YSLPAVLGWTEPWWHPIQTRGNG*CMRAGG
Trigger: CCCTCCTGCCCGCATACACAACCCATTTCCCCTGGT...CTGAATCGGATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp GTGGAGAGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGGGAACTTGCGTGGGGTaGAGCTGGTACCTACATATG +
Preference number: 5 (lower is better)
Translates to: VERAQVPSDPPEFIHFQRGTCVG*SWYLHM
Trigger: CATATGTAGGTACCAGCTCAACCCCACGCAAGTTCC...CCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCTCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS GCA 90 bp CCCATTGAAGCCCTTCCCCACCAGGCCGAGACCAGGACTACCCCCTaGCCCTCCATCTCCCTTTATGTCCCGTATGTGATGAATCTTGCT +
Preference number: 5 (lower is better)
Translates to: PIEALPHQAETRTTP*PSISLYVPYVMNLA
Trigger: AGCAAGATTCATCACATACGGGACATAAAGGGAGATGGAGGGGCAGGGGGTAGTCCTGGTCTCGGCCTGGTGGGGAAGGGCTTCAATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS-3UTR CAA 90 bp GGACTCAGAGGTACCCACCCTAAGTTCCTGGGCAAACAGCCAGAATCGTGGAGAACCAGGGGAAATGGGTaGTGTATGCGGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GLRGTHPKFLGKQPESWRTRGNG*CMRAGG
Trigger: CCCTCCTGCCCGCATACACAACCCATTTCCCCTGGT...TCTCCACGATTCTGGCTGTTTGCCCAGGAACTTAGGGTGGGTACCTCTGAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000568146.1
CDS GCA 90 bp GCTCGATCCCAGCCGCCGGACGGCTCCGCAAGCACAGGACATCATTaGACTGTGTACACGCAGACTCTCCGCTTTCTTCAACTGAGTTTT +
Preference number: 5 (lower is better)
Translates to: ARSQPPDGSASTGHH*TVYTQTLRFLQLSF
Trigger: AAAACTCAGTTGAAGAAAGCGGAGAGTCTGCGTGTACACAGTGCAATGATGTCCTGTGCTTGCGGAGCCGTCCGGCGGCTGGGATCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563439.5
CDS-3UTR CAA 90 bp TCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGCTGCCAAGTGGCTCAACTAGGGGGCTAGGTTaGGGATCTCCAGGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: SGTCVGLSWYLHMLPSGSTRGLG*GSPGCS
Trigger: GCTGCACCCTGGAGATCCCAAACCTAGCCCCCTAGT...TGAGCCACTTGGCAGCATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp CCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGCATCGGAACTTGCGTGGGGTaGAGCTGGTACCTACATATG +
Preference number: 5 (lower is better)
Translates to: PEFIHFQRYWAGPSLGGIGTCVG*SWYLHM
Trigger: CATATGTAGGTACCAGCTCAACCCCACGCAAGTTCC...GATGCCACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp ACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGGCTGGACCGAGCCTTGGTGGGAACTTGCGTGGGGTaGAGCTGGTACCTACATATG +
Preference number: 5 (lower is better)
Translates to: TLRSLFTSSGTGLDRALVGTCVG*SWYLHM
Trigger: CATATGTAGGTACCAGCTCAACCCCACGCAAGTTCC...CACCAAGGCTCGGTCCAGCCCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268605.11
ENST00000564053.5
ENST00000568146.1
CDS-3UTR CAA 90 bp TTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATGGGCGGGGCACCGCCTGTTGTATAGAGCGCCTTTaGTGTAAGTCACTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: FSSSSIPGPIQHGRGTACCIERL*CKSLVR
Trigger: TCTGACCAGTGACTTACACAAAAGGCGCTCTATACA...ACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268605.11
CDS-3UTR CAA 90 bp TTGCTCCATGTTCAGCTCAGGAACTTGCGTGGGGTTGAGCTGGTACCTACATATGGGCTGGACCGAGCCTaGGTGGCATCCGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: LLHVQLRNLRGVELVPTYGLDRA*VASDSA
Trigger: AGCTGAATCGGATGCCACCAAGGCTCGGTCCAGCCC...ATATGTAGGTACCAGCTCAACCCCACGCAAGTTCCTGAGCTGAACATGGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS GCA 90 bp ATCTTGCTTCTCCACTTCTCAGTGAGTCTCCATCAGCTCCTGCCTTaGCACCCCACCATCGTCACCTCATGTCCTGTAACAGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: ILLLHFSVSLHQLLP*HPTIVTSCPVTVPL
Trigger: CAGAGGGACTGTTACAGGACATGAGGTGACGATGGTGGGGTGGCAAGGCAGGAGCTGATGGAGACTCACTGAGAAGTGGAGAAGCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS-3UTR CAA 90 bp AGAGCCCAGGTCCCGTCCGACCCTCCGGAGTTTATTCACTTCCAGCGGTACTGGTGTATAGAGCGCCTTTaGTGTAAGTCACTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: RAQVPSDPPEFIHFQRYWCIERL*CKSLVR
Trigger: TCTGACCAGTGACTTACACAAAAGGCGCTCTATACA...CCAGTACCGCTGGAAGTGAATAAACTCCGGAGGGTCGGACGGGACCTGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000568146.1
CDS TCA 90 bp CCTTTATGTCCCGTATGTGATGAATCTTGCTTCTCCACTTCTCAGTaGGTCTCCATCAGCTCCTGCCTTGCCACCCCACCATCGTCACCT +
Preference number: 5 (lower is better)
Translates to: PLCPVCDESCFSTSQ*VSISSCLATPPSSP
Trigger: AGGTGACGATGGTGGGGTGGCAAGGCAGGAGCTGATGGAGACTCACTGAGAAGTGGAGAAGCAAGATTCATCACATACGGGACATAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS TCA 90 bp GACATCATTGCACTGTGTACACGCAGACTCTCCGCTTTCTTCAACTaGGTTTTCCAGAGTGTCCCTCCAATCGGTGGGCAAAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: DIIALCTRRLSAFFN*VFQSVPPIGGQRKG
Trigger: TCCCTTCCTTTGCCCACCGATTGGAGGGACACTCTGGAAAACTCAGTTGAAGAAAGCGGAGAGTCTGCGTGTACACAGTGCAATGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000565645.1
ENST00000568086.1
CDS CCA 90 bp TCAAATGTTCCCTTGTCTACACCAATGCCTAAGTGTCCCAAGGGCTaGTGGTTCCTTCTTCTGTGTACCGTGAACAACACATGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: SNVPLSTPMPKCPKG*WFLLLCTVNNTCPH
Trigger: GTGAGGGCATGTGTTGTTCACGGTACACAGAAGAAGGAACCACCAGCCCTTGGGACACTTAGGCATTGGTGTAGACAAGGGAACATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000565645.1
ENST00000568086.1
CDS CCA 72 bp CAGTCCCAAGCGGGGTCCGGCGCGCCCGCGGTACGCTaGGCACAGCGTAGCAGCTCCTGGCAGGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: QSQAGSGAPAVR*AQRSSSWQAAS
Trigger: CGAGGCCGCCTGCCAGGAGCTGCTACGCTGTGCCCAGCGTACCGCGGGCGCGCCGGACCCCGCTTGGGACTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp TCTGGGCAACCCGGGGCATGTGGTCCCCGAGCCGGGTaGCTCCGGCGTCCAGTGGCCTGGGCATGGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SGQPGACGPRAG*LRRPVAWAWRV
Trigger: GACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGCCCAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp CGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCCGGACC +
Preference number: 6 (lower is better)
Translates to: RAGCLRRPVAWA*RVIAAVPVART
Trigger: GGTCCGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
CDS CCA 72 bp GGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCTGCGGTCCCGGTAGCC +
Preference number: 6 (lower is better)
Translates to: GPRAGCLRRPVA*AWRVIAAVPVA
Trigger: GGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568503.1
CDS CCA 72 bp GGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTaGGCATGGAGGGTCATAGCTGCGGTCCCGGTAGCG +
Preference number: 6 (lower is better)
Translates to: GPRAGCLRRPVA*AWRVIAAVPVA
Trigger: CGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCGGGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS CCA 72 bp CGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCCTGCGC +
Preference number: 6 (lower is better)
Translates to: RAGCLRRPVAWA*RVIAAVPVALR
Trigger: GCGCAGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS CCA 72 bp CGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RAGCLRRPVAWA*RVIAAVPVAWG
Trigger: GCCCCAGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568503.1
CDS CAA 90 bp GGCCTCAGCTTCCAGCTCTGGCTCTGGCTCCTCCGGGGTCCCGGATaGCACCGCCTCGGAGCCCTCAGGGCCCCCGGCCTCGTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GLSFQLWLWLLRGPG*HRLGALRAPGLVRV
Trigger: GACCCTGACGAGGCCGGGGGCCCTGAGGGCTCCGAGGCGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CAA 90 bp GTACGCTGGGCACAGCGTAGCAGCTCCTGGCAGGCGGCCTCGCCCTaGCCCTGCACCAGCAGCAGTAGGCGGCGCACCCTGCGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: VRWAQRSSSWQAASP*PCTSSSRRRTLRSA
Trigger: TGCCGAGCGCAGGGTGCGCCGCCTACTGCTGCTGGTGCAGGGCAAGGGCGAGGCCGCCTGCCAGGAGCTGCTACGCTGTGCCCAGCGTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp CCGGCGTCCAGTGGCCTGGGCATGGAGGGTCATAGCTaGGGTCCCGGTAGCCTCGATCCCAGCCGCCGGACG +
Preference number: 6 (lower is better)
Translates to: PASSGLGMEGHS*GPGSLDPSRRT
Trigger: CGTCCGGCGGCTGGGATCGAGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563258.1
CDS CCA 72 bp CGTCAGGGTCTGAAGCTCTGGGCAACCCGGGGCATGTaGTCCCCGAGCCGGGTGCCTCCGGCGTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: RQGLKLWATRGM*SPSRVPPASSG
Trigger: GCCACTGGACGCCGGAGGCACCCGGCTCGGGGACCACATGCCCCGGGTTGCCCAGAGCTTCAGACCCTGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp CGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: RAGCLRRPVAWA*RVIAAVPVACC
Trigger: GCAGCACGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS GCA 72 bp GCCAGCAGCGCGTCCAACAGCAGTCCCGAGTCCGCCTaGAGCGTCTCGACCAGGCGTTTCCGCTCGCGGTCG +
Preference number: 6 (lower is better)
Translates to: ASSASNSSPESA*SVSTRRFRSRS
Trigger: CGACCGCGAGCGGAAACGCCTGGTCGAGACGCTGCAGGCGGACTCGGGACTGCTGTTGGACGCGCTGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp GCGCACCCTGCGCTCGGCATCAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGTGAGCACGCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: AHPALGIRQCIQ*LVLWPGEHAPR
Trigger: GCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp CCGGCGTCCAGTGGCCTGGGCATGGAGGGTCATAGCTaGGGTCCCGGTAGCCCGGACCCACGTGCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: PASSGLGMEGHS*GPGSPDPRAAS
Trigger: ACTGGCAGCACGTGGGTCCGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
CDS GCA 72 bp CCGGCGTCCAGTGGCCTGGGCATGGAGGGTCATAGCTaGGGTCCCGGTAGCGTGCTGCCAGTCCCAAGCGGG +
Preference number: 6 (lower is better)
Translates to: PASSGLGMEGHS*GPGSVLPVPSG
Trigger: CCCGCTTGGGACTGGCAGCACGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568146.1
CDS GCA 72 bp CCGGCGTCCAGTGGCCTGGGCATGGAGGGTCATAGCTaGGGTCCCGGTAGCCCTGCGCTCGGCATCAGGCAG +
Preference number: 6 (lower is better)
Translates to: PASSGLGMEGHS*GPGSPALGIRQ
Trigger: CTGCCTGATGCCGAGCGCAGGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS CCA 72 bp CGAGCCGGGTGCCTCCGGCGTCCAGTGGCCTGGGCATaGAGGGTCATAGCTGCGGTCCCGGTAGCCTCGATC +
Preference number: 6 (lower is better)
Translates to: RAGCLRRPVAWA*RVIAAVPVASI
Trigger: GATCGAGGCTACCGGGACCGCAGCTATGACCCTCCATGCCCAGGCCACTGGACGCCGGAGGCACCCGGCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563258.1
CDS GCA 72 bp GGTAGCCCTGCGCTCGGCATCAGGCAGTGCATCCAATaGCTCGTACTCTGGCCCGGTGAGCACGCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: GSPALGIRQCIQ*LVLWPGEHAPR
Trigger: GCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS CCA 72 bp CTCGGCATCAGGCAGTGCATCCAATGCCTCGTACTCTaGCCCGGTGAGCACGCCCCGCGCCAGCAGCGCGTC +
Preference number: 6 (lower is better)
Translates to: LGIRQCIQCLVL*PGEHAPRQQRV
Trigger: GACGCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp ATCCCAGCCGCCGGACGGCTCCGCAAGCACAGGACCTaGAGGCCAACACGGGGAACTCGGTGTCCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: IPAAGRLRKHRT*RPTRGTRCPPA
Trigger: GGCAGGAGGACACCGAGTTCCCCGTGTTGGCCTCCAGGTCCTGTGCTTGCGGAGCCGTCCGGCGGCTGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000566871.5
ENST00000568503.1
CDS CAA 72 bp TCGCGGTCGATAGTCTCTGACGGCCGCTCCTGCGCGTaGCCCATTGTCGGGGCTCGATCCCAGCCGCCGGAC +
Preference number: 6 (lower is better)
Translates to: SRSIVSDGRSCA*PIVGARSQPPD
Trigger: GTCCGGCGGCTGGGATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS TCA 72 bp CTCGACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTTGCCCATTGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: LDQAFPLAVDSL*RPLLRVAHCRG
Trigger: CCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGTCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268605.11
ENST00000564992.1
CDS TCA 72 bp CAGGCAGTGCATCCAATGCCTCGTACTCTGGCCCGGTaGGCACGCCCCGCGCCAGCAGCGCGTCCAACAGCA +
Preference number: 6 (lower is better)
Translates to: QAVHPMPRTLAR*ARPAPAARPTA
Trigger: TGCTGTTGGACGCGCTGCTGGCGCGGGGCGTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS TCA 72 bp CTCGACCAGGCGTTTCCGCTCGCGGTCGATAGTCTCTaGCGGCCGCTCCTGCGCGTTGCCCATTGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: LDQAFPLAVDSL*RPLLRVAHCRG
Trigger: GCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAAACGCCTGGTCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp TTCCGCTCGCGGTCGATAGTCTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGGGCTCGATCCCAGCCG +
Preference number: 6 (lower is better)
Translates to: FRSRSIVSDGRS*ALPIVGARSQP
Trigger: CGGCTGGGATCGAGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp CCTTGCCCTGCACCAGCAGCAGTAGGCGGCGCACCCTaGGCTCGGCATCAGGCAGTGCATCCAATGCCTCGT +
Preference number: 6 (lower is better)
Translates to: PCPAPAAVGGAP*ARHQAVHPMPR
Trigger: ACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGTGCGCCGCCTACTGCTGCTGGTGCAGGGCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563439.5
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp TGCGGTCCCGGTAGCCCTGCGCTCGGCATCAGGCAGTaGATCCAATGCCTCGTACTCTGGCCCGGTGAGCAC +
Preference number: 6 (lower is better)
Translates to: CGPGSPALGIRQ*IQCLVLWPGEH
Trigger: GTGCTCACCGGGCCAGAGTACGAGGCATTGGATGCACTGCCTGATGCCGAGCGCAGGGCTACCGGGACCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566871.5
CDS CCA 72 bp AGCCTCTTTAGAGGCCTCAGCTTCCAGCTCTGGCTCTaGCTCCTCCGGGGTCCCGGATTGCACCGCCTCGGA +
Preference number: 6 (lower is better)
Translates to: SLFRGLSFQLWL*LLRGPGLHRLG
Trigger: TCCGAGGCGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGCCTCTAAAGAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp CGGTTCAGCCTCTTTAGAGGCCTCAGCTTCCAGCTCTaGCTCTGGCTCCTCCGGGGTCCCGGATTGCACCGC +
Preference number: 6 (lower is better)
Translates to: RFSLFRGLSFQL*LWLLRGPGLHR
Trigger: GCGGTGCAATCCGGGACCCCGGAGGAGCCAGAGCCAGAGCTGGAAGCTGAGGCCTCTAAAGAGGCTGAACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000565560.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp GGACTCGTCCCTTTCCTCGAAGTCGGGCTCGGGCTCTaGGTCCGGTTCTGGCTCCAGTTCCGGCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: GLVPFLEVGLGL*VRFWLQFRLWF
Trigger: GAACCAGAGCCGGAACTGGAGCCAGAACCGGACCCAGAGCCCGAGCCCGACTTCGAGGAAAGGGACGAGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564860.1
ENST00000564992.1
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS GCA 72 bp GACCTGGAGGCCAACACGGGGAACTCGGTGTCCTCCTaGCTCTCCAGACGCTCTGTCCTGTCTCCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: DLEANTGNSVSS*LSRRSVLSPPQ
Trigger: CTGAGGAGGAGACAGGACAGAGCGTCTGGAGAGGCAGGAGGACACCGAGTTCCCCGTGTTGGCCTCCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564053.5
CDS GCA 72 bp TTCCGCTCGCGGTCGATAGTCTCTGACGGCCGCTCCTaGGCGTTGCCCATTGTCGGGGCAGGATCACAGAAC +
Preference number: 6 (lower is better)
Translates to: FRSRSIVSDGRS*ALPIVGAGSQN
Trigger: GTTCTGTGATCCTGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGAGCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565560.5
CDS CAA 72 bp TCGCGGTCGATAGTCTCTGACGGCCGCTCCTGCGCGTaGCCCATTGTCGGGGCAGGATCACAGAACGCATGC +
Preference number: 6 (lower is better)
Translates to: SRSIVSDGRSCA*PIVGAGSQNAC
Trigger: GCATGCGTTCTGTGATCCTGCCCCGACAATGGGCAACGCGCAGGAGCGGCCGTCAGAGACTATCGACCGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565560.5
CDS TCA 72 bp GCGGTCCCGGTAGCCTGGGGCGGAAGTGGGAGTGACTaGGGCTCAATTTACCCCTGTGCGGTTTCACACTCG +
Preference number: 6 (lower is better)
Translates to: AVPVAWGGSGSD*GSIYPCAVSHS
Trigger: CGAGTGTGAAACCGCACAGGGGTAAATTGAGCCTCAGTCACTCCCACTTCCGCCCCAGGCTACCGGGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568503.1
CDS GCA 72 bp GCCCTTCCCCACCAGGCCGAGACCAGGACTACCCCCTaGCCCTCCATCTCCCTTTATGTCCCGTATGTGATG +
Preference number: 6 (lower is better)
Translates to: ALPHQAETRTTP*PSISLYVPYVM
Trigger: CATCACATACGGGACATAAAGGGAGATGGAGGGGCAGGGGGTAGTCCTGGTCTCGGCCTGGTGGGGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS CCA 72 bp CGGCTCTGGTTCTGCTTCAGCCTCGGGTTCCAGCTCTaGCTCTGGCTCCGGCTCCGGTTCAGCCTCTTTAGA +
Preference number: 6 (lower is better)
Translates to: RLWFCFSLGFQL*LWLRLRFSLFR
Trigger: TCTAAAGAGGCTGAACCGGAGCCGGAGCCAGAGCCAGAGCTGGAACCCGAGGCTGAAGCAGAACCAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564992.1
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp ATTCAGCTCCAGCAGCATCCCAGGTCCTATCCAGCATaGGCGGGGCACCGCCTGTCAGAGCTCTGGCCTTCA +
Preference number: 6 (lower is better)
Translates to: IQLQQHPRSYPA*AGHRLSELWPS
Trigger: TGAAGGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATAGGACCTGGGATGCTGCTGGAGCTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000564860.1
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS TCA 72 bp AGCTGCGGTCCCGGTAGCCTGGGGCGGAAGTGGGAGTaGCTGAGGCTCAATTTACCCCTGTGCGGTTTCACA +
Preference number: 6 (lower is better)
Translates to: SCGPGSLGRKWE*LRLNLPLCGFT
Trigger: TGTGAAACCGCACAGGGGTAAATTGAGCCTCAGTCACTCCCACTTCCGCCCCAGGCTACCGGGACCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568503.1
CDS CCA 72 bp TATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTaGCCTTCAGGAATCTTCGGACTCGTCCCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: YPAWAGHRLSEL*PSGIFGLVPFL
Trigger: GAGGAAAGGGACGAGTCCGAAGATTCCTGAAGGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000268605.11
ENST00000563258.1
ENST00000564053.5
ENST00000566871.5
ENST00000568146.1
ENST00000568503.1
CDS CCA 72 bp TATCCAGCATGGGCGGGGCACCGCCTGTCAGAGCTCTaGCCTTCAGGAATACCTTCGGACTCGTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: YPAWAGHRLSEL*PSGIPSDSSLS
Trigger: GGAAAGGGACGAGTCCGAAGGTATTCCTGAAGGCCAGAGCTCTGACAGGCGGTGCCCCGCCCATGCTGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564860.1
CDS CAA 72 bp CCAGCCGCCGGACGGCTCCGCAAGCACAGGACATCATaGCACTGTGTACACGCAGACTCTCCGCTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: PAAGRLRKHRTS*HCVHADSPLSS
Trigger: TGAAGAAAGCGGAGAGTCTGCGTGTACACAGTGCAATGATGTCCTGTGCTTGCGGAGCCGTCCGGCGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563439.5
CDS CAA 90 bp GGCTCGATCCCAGCCGCCGGACGGCTCCGCAAGCACAGGACATCATaGCACTGTGTACACGCAGACTCTCCGCTTTCTTCAACTGAGTTT +
Preference number: 6 (lower is better)
Translates to: GSIPAAGRLRKHRTS*HCVHADSPLSSTEF
Trigger: AAACTCAGTTGAAGAAAGCGGAGAGTCTGCGTGTACACAGTGCAATGATGTCCTGTGCTTGCGGAGCCGTCCGGCGGCTGGGATCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563439.5
CDS GCA 72 bp CAGCCGCCGGACGGCTCCGCAAGCACAGGACATCATTaGACTGTGTACACGCAGACTCTCCGCTTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: QPPDGSASTGHH*TVYTQTLRFLQ
Trigger: TTGAAGAAAGCGGAGAGTCTGCGTGTACACAGTGCAATGATGTCCTGTGCTTGCGGAGCCGTCCGGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563439.5
CDS CCA 72 bp ACACCCCACTGCCCATCAGAGACAACCCAAAATATCTaGTCTGGCTACTCTAGCCTCCTCCCACCACCCTGG +
Preference number: 6 (lower is better)
Translates to: TPHCPSETTQNI*SGYSSLLPPPW
Trigger: CCAGGGTGGTGGGAGGAGGCTAGAGTAGCCAGACCAGATATTTTGGGTTGTCTCTGATGGGCAGTGGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568086.1
CDS CAA 90 bp GCCAGGGATCGGAGAACTCACTATGCCTCTGGCACCTCGGAGCCTTaGCTGATGCTGATCGCTAAGACTGGAATCCTTTTCTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: ARDRRTHYASGTSEP*LMLIAKTGILFSSL
Trigger: GAGGGAGGAGAAAAGGATTCCAGTCTTAGCGATCAGCATCAGCAAAGGCTCCGAGGTGCCAGAGGCATAGTGAGTTCTCCGATCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568086.1
CDS CAA 72 bp CACTCCCATTCTGCCAGGCCCGATAGCACAGTGACTTaGACAACCCTCTGGGCTAGGATTGCTGTTCCCATT +
Preference number: 6 (lower is better)
Translates to: HSHSARPDSTVT*TTLWARIAVPI
Trigger: AATGGGAACAGCAATCCTAGCCCAGAGGGTTGTCAAAGTCACTGTGCTATCGGGCCTGGCAGAATGGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS CAA 72 bp CTGCTTCCCCACTATGCCTCTGGCACCTCGGAGCCTTaGCTGATGCTGATCGCTAAGACTGGAATCCTTTTC +
Preference number: 6 (lower is better)
Translates to: LLPHYASGTSEP*LMLIAKTGILF
Trigger: GAAAAGGATTCCAGTCTTAGCGATCAGCATCAGCAAAGGCTCCGAGGTGCCAGAGGCATAGTGGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565645.1
CDS CAA 90 bp AATCTTGCTTCTCCACTTCTCAGTGAGTCTCCATCAGCTCCTGCCTaGCCACCCCACCATCGTCACCTCATGTCCTGTAACAGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: NLASPLLSESPSAPA*PPHHRHLMSCNSPS
Trigger: AGAGGGACTGTTACAGGACATGAGGTGACGATGGTGGGGTGGCAAGGCAGGAGCTGATGGAGACTCACTGAGAAGTGGAGAAGCAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS CAA 90 bp CTCTCAAATCTGCTTCCCCACTATGCCTCTGGCACCTCGGAGCCTTaGCTGATGCTGATCGCTAAGACTGGAATCCTTTTCTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LSNLLPHYASGTSEP*LMLIAKTGILFSSL
Trigger: GAGGGAGGAGAAAAGGATTCCAGTCTTAGCGATCAGCATCAGCAAAGGCTCCGAGGTGCCAGAGGCATAGTGGGGAAGCAGATTTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565645.1
CDS TCA 72 bp GCACTGTGTACACGCAGACTCTCCGCTTTCTTCAACTaGGTTTTCCAGAGTGTCCCTCCAATCGGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: ALCTRRLSAFFN*VFQSVPPIGGQ
Trigger: TTGCCCACCGATTGGAGGGACACTCTGGAAAACTCAGTTGAAGAAAGCGGAGAGTCTGCGTGTACACAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563439.5
ENST00000564053.5
ENST00000565645.1
ENST00000568086.1
CDS CCA 72 bp CTAAGACTGGAATCCTTTTCTCCTCCCTCCGCTCCGTaGACCTATCCATCGTCCAGGACTCAAATGTTCCCT +
Preference number: 6 (lower is better)
Translates to: LRLESFSPPSAP*TYPSSRTQMFP
Trigger: AGGGAACATTTGAGTCCTGGACGATGGATAGGTCCACGGAGCGGAGGGAGGAGAAAAGGATTCCAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000565645.1
ENST00000568086.1
CDS CCA 72 bp GCCAGGCCCGATAGCACAGTGACTTTGACAACCCTCTaGGCTAGGATTGCTGTTCCCATTTTACAGATGAGG +
Preference number: 6 (lower is better)
Translates to: ARPDSTVTLTTL*ARIAVPILQMR
Trigger: CCTCATCTGTAAAATGGGAACAGCAATCCTAGCCCAGAGGGTTGTCAAAGTCACTGTGCTATCGGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568199.1
CDS CAA 72 bp CGGAGAACTCACTATGCCTCTGGCACCTCGGAGCCTTaGCTGATGCTGATCGCTAAGACTGGAATCCTTTTC +
Preference number: 6 (lower is better)
Translates to: RRTHYASGTSEP*LMLIAKTGILF
Trigger: GAAAAGGATTCCAGTCTTAGCGATCAGCATCAGCAAAGGCTCCGAGGTGCCAGAGGCATAGTGAGTTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568086.1
CDS GCA 72 bp TCGTCCAGGACTCAAATGTTCCCTTGTCTACACCAATaGCTAAGTGTCCCAAGGGCTGGTGGTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SSRTQMFPCLHQ*LSVPRAGGSFF
Trigger: GAAGAAGGAACCACCAGCCCTTGGGACACTTAGGCATTGGTGTAGACAAGGGAACATTTGAGTCCTGGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000565645.1
ENST00000568086.1
CDS GCA 72 bp CCCCGTTTATCCAAACTAAGGTCTTTCTCTCAAATCTaGTTCCCCACTATGCCTCTGGCACCTCGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: PRLSKLRSFSQI*FPTMPLAPRSL
Trigger: AAGGCTCCGAGGTGCCAGAGGCATAGTGGGGAAGCAGATTTGAGAGAAAGACCTTAGTTTGGATAAACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565645.1
CDS CCA 72 bp TTGTCTACACCAATGCCTAAGTGTCCCAAGGGCTGGTaGTTCCTTCTTCTGTGTACCGTGAACAACACATGC +
Preference number: 6 (lower is better)
Translates to: LSTPMPKCPKGW*FLLLCTVNNTC
Trigger: GCATGTGTTGTTCACGGTACACAGAAGAAGGAACCACCAGCCCTTGGGACACTTAGGCATTGGTGTAGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564053.5
ENST00000565645.1
ENST00000568086.1
CDS TCA 72 bp CCCTCTGGGCTAGGATTGCTGTTCCCATTTTACAGATaGGGAGACAGGCTCAGAGATTCAGTGGTAAAACTG +
Preference number: 6 (lower is better)
Translates to: PSGLGLLFPFYR*GDRLRDSVVKL
Trigger: CAGTTTTACCACTGAATCTCTGAGCCTGTCTCCTCATCTGTAAAATGGGAACAGCAATCCTAGCCCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568199.1