Pregenerated sensors for NOG (Homo sapiens)
Ensembl gene IDs: ENSG00000183691Ensembl transcript IDs: ENST00000332822.6
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCACTGGTTGGAGGCGGTaGAGGGGGCGTCGGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: ITLNSIASSRSKENQNTFTGWRR*RGRRWG Trigger: TCCCCACCGACGCCCCCTGCACCGCCTCCAACCAGT...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| 3UTR-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCTGCAGGGGGCGTCGGTaGGGATCGATCAAGTGTCCG | + |
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Preference number: 2 (lower is better) Translates to: ITLNSIASSRSKENQNTFCRGRR*GSIKCP Trigger: CGGACACTTGATCGATCCCCACCGACGCCCCCTGCA...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| 3UTR-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCCTCGCTAGAGGGTGGTaGAACTGGTTGGAGGCGGTG | + |
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Preference number: 2 (lower is better) Translates to: ITLNSIASSRSKENQNTFLARGW*NWLEAV Trigger: CACCGCCTCCAACCAGTTCCACCACCCTCTAGCGAG...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| 3UTR-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCACCCTCGCTAGAGGGTaGTGGAACTGGTTGGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: ITLNSIASSRSKENQNTFTLARG*WNWLEA Trigger: CGCCTCCAACCAGTTCCACCACCCTCTAGCGAGGGT...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| 3UTR-3UTR GCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCCCCCCTGCTTCGCCATaGGAAGGGCACTGGAATATA | + |
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Preference number: 2 (lower is better) Translates to: ITLNSIASSRSKENQNTFPPASP*EGHWNI Trigger: TATATTCCAGTGCCCTTCGCATGGCGAAGCAGGGGG...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| 3UTR-3UTR GCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCTACACAGTTAAACAGTaGATTACAGGAACCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ITLNSIASSRSKENQNTFYTVKQ*ITGTRK Trigger: CTTTCTGGTTCCTGTAATGCACTGTTTAACTGTGTA...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| 3UTR GCA 72 bp | CCCTCGCTAGAGGGTGGTGGAACTGGTTGGAGGCGGTaGAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCG | + |
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Preference number: 3 (lower is better) Translates to: PSLEGGGTGWRR*RGRRWGSIKCP Trigger: CGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCTCCAACCAGTTCCACCACCCTCTAGCGAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGCGTCCGGCCGCTCTGTaGAAGCGCCGCTGGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRRPAAL*KRRWLS Trigger: GCTCAGCCAGCGGCGCTTGCACAGAGCGGCCGGACG...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGGGTCTGGGTGTTCGATaGGGTCCACCAGGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRGLGVR*GPPGAG Trigger: ACCTGCCCCTGGTGGACCTCATCGAACACCCAGACC...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGCGGACTTGGACGGCTTaGACACCATGCCCTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRRTWTA*TPCPRA Trigger: TGCCCGAGGGCATGGTGTGCAAGCCGTCCAAGTCCG...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGCTCGCTAGAGGGTGGTaGAACTGGTTGGAGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRLARGW*NWLEAV Trigger: CACCGCCTCCAACCAGTTCCACCACCCTCTAGCGAG...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGAGCACGAGCGCTTACTaGAGCAGCTGCCCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRSTSAY*SSCPPS Trigger: TGAAGGTGGGCAGCTGCTTCAGTAAGCGCTCGTGCT...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGTCCTCCGCAGCTTCTTaGTTAGGCGCTGCTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRSSAAS*LGAASC Trigger: GCAAGAAGCAGCGCCTAAGCAAGAAGCTGCGGAGGA...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAAACTGGTTGGAGGCGGTaGAGGGGGCGTCGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKTGWRR*RGRRWG Trigger: TCCCCACCGACGCCCCCTGCACCGCCTCCAACCAGT...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAAGGTGGCCATGAAGCCTaGGTCGTAGTGGCCCCCGAG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKGGHEA*VVVAPE Trigger: CTCGGGGGCCACTACGACCCAGGCTTCATGGCCACC...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTGCAGGGCCGGCAGCATaGGCCGCCGGGAGAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: NNIELYSFFEVQGKPKHFAGPAA*AAGRAL Trigger: AAGGGCTCTCCCGGCGGCTCATGCTGCCGGCCCTGC...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAATTAGGCGCTGCTTCTTaGCCTGGGCCAAGCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKLGAAS*PGPSPR Trigger: CCGAGGGCTTGGCCCAGGGCAAGAAGCAGCGCCTAA...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCCTCTCCCGGGTCTACTaGGGAAGGCGGCCGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFLSRVY*GRRPRL Trigger: CAGCCGCGGCCGCCTTCCCCAGTAGACCCGGGAGAG...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTAGCGCTCCATGCCTCTaGCGCGCGCCCGGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NNIELYSFFEVQGKPKHFSAPCL*RAPGAA Trigger: AGCAGCCCCGGGCGCGCGCCAGAGGCATGGAGCGCT...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAATGCAGGGGGCGTCGGTaGGGATCGATCAAGTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKCRGRR*GSIKCP Trigger: CGGACACTTGATCGATCCCCACCGACGCCCCCTGCA...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCGGGGCGAGGTGGCCATaGAGCCTGGGTCGTAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFGARWP*SLGRSG Trigger: GCCACTACGACCCAGGCTTCATGGCCACCTCGCCCC...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAACAGGTTGTCGCTGGGTaGCGGGCGGATGTGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKQVVAG*RADVEI Trigger: TATCTCCACATCCGCCCGGCACCCAGCGACAACCTG...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAAACCCTCGCTAGAGGGTaGTGGAACTGGTTGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKTLARG*WNWLEA Trigger: CGCCTCCAACCAGTTCCACCACCCTCTAGCGAGGGT...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTGCCACCGCAGCACCGTaGGGTGCACGGACTTGGACG | + |
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Preference number: 4 (lower is better) Translates to: NNIELYSFFEVQGKPKHFATAAP*GARTWT Trigger: CGTCCAAGTCCGTGCACCTCACGGTGCTGCGGTGGC...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCGCGGCCAAAAGCGGCTaGCCAGGTCGTTCCACGCGT | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFAAKSG*PGRSTR Trigger: ACGCGTGGAACGACCTGGGCAGCCGCTTTTGGCCGC...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCACGGCTTGCACACCATaGCCTCGGGCACGGAGCACG | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFTACTP*PRARST Trigger: CGTGCTCCGTGCCCGAGGGCATGGTGTGCAAGCCGT...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTGCAAGCGCCGCTGGCTaGGCTGGTTCTAGGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: NNIELYSFFEVQGKPKHFASAAG*AGSRGT Trigger: AGTGCCCCTAGAACCAGCTCAGCCAGCGGCGCTTGC...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCCCTCCTCCTCTCGCTaGTCTTCGTCCGGCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NNIELYSFFEVQGKPKHFPSSSR*SSSGRS Trigger: AGAGCGGCCGGACGAAGAGCAGCGAGAGGAGGAGGG...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAATTCTTGCTTAGGCGCTaGTTCTTGCCCTGGGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKFLLRR*FLPWAK Trigger: CTTGGCCCAGGGCAAGAAGCAGCGCCTAAGCAAGAA...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCCGCAGCACCGTGAGGTaGACGGACTTGGACGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFRSTVR*TDLDGL Trigger: CAAGCCGTCCAAGTCCGTGCACCTCACGGTGCTGCG...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAACCCCCTGCTTCGCCATaGGAAGGGCACTGGAATATA | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKPPASP*EGHWNI Trigger: TATATTCCAGTGCCCTTCGCATGGCGAAGCAGGGGG...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCCGCTGCTTCTTGCCCTaGGCCAAGCCCTCGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFRCFLP*AKPSEN Trigger: GTTCTCCGAGGGCTTGGCCCAGGGCAAGAAGCAGCG...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCGAAGGCGGCCGCGGCTaGGCATCCGAAATTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFEGGRG*ASEITP Trigger: TGGAGTAATTTCGGATGCCCAGCCGCGGCCGCCTTC...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAAGAAATGATGGGGTACTaGATGGGAATCCAGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKEMMGY*MGIQPQ Trigger: CTGCGGCTGGATTCCCATCCAGTACCCCATCATTTC...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCAGAACTCTAGCCCTTTaGTCTCGCTCGGCATGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFRTLAL*SRSAWP Trigger: GGGCCATGCCGAGCGAGATCAAAGGGCTAGAGTTCT...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCGAAAGGCACACAAGTTaGCCGCAACTCCTCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFERHTS*PQLLSR Trigger: CCGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTC...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTACGGGGCAGAATGTCTaGGACCACAGCCACATCTGT | + |
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Preference number: 4 (lower is better) Translates to: NNIELYSFFEVQGKPKHFTGQNV*DHSHIC Trigger: ACAGATGTGGCTGTGGTCGCAGACATTCTGCCCCGT...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR TCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCACTTGCACTCGGAAATaGTGGGGTACTGGATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFTCTRK*WGTGWE Trigger: TTCCCATCCAGTACCCCATCATTTCCGAGTGCAAGT...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCGTCAAAGATAGGGTCTaGGTGTTCGATGAGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ITLNSIASSRSKENQNTFVKDRV*VFDEVH Trigger: GTGGACCTCATCGAACACCCAGACCCTATCTTTGAC...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAACCATGCGAAGGGCACTaGAATATAAATAGCAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKPCEGH*NINSRL Trigger: TAACCTGCTATTTATATTCCAGTGCCCTTCGCATGG...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR GCA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAATACACAGTTAAACAGTaGATTACAGGAACCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: VKQCITGTRKLGLCSPEKYTVKQ*ITGTRK Trigger: CTTTCTGGTTCCTGTAATGCACTGTTTAACTGTGTA...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 90 bp | CAAGCGCCGCTGGCTGAGCTGGTTCTAGGGGCACTTCCCTCCGCCTaGTCCGGGCTCCGCGGCCGGCTCTGCCCGGCGGACTCCAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: QAPLAELVLGALPSA*SGLRGRLCPADSSG Trigger: GCCGCTGGAGTCCGCCGGGCAGAGCCGGCCGCGGAGCCCGGAGCAGGCGGAGGGAAGTGCCCCTAGAACCAGCTCAGCCAGCGGCGCTTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 90 bp | CGGCGCAGGGCGCGTGGACGAGCCGCTCTCCCCTCCTCCTCTCGCTaGTCTTCGTCCGGCCGCTCTGTGCAAGCGCCGCTGGCTGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RRRARGRAALPSSSR*SSSGRSVQAPLAEL Trigger: CAGCTCAGCCAGCGGCGCTTGCACAGAGCGGCCGGACGAAGAGCAGCGAGAGGAGGAGGGGAGAGCGGCTCGTCCACGCGCCCTGCGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 90 bp | GGGTACTGGATGGGAATCCAGCCGCAGCGCTGGCCCCCGCGCCGCTaGCAGCGCCACCGCAGCACCGTGAGGTGCACGGACTTGGACGGC | + |
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Preference number: 5 (lower is better) Translates to: GYWMGIQPQRWPPRR*QRHRSTVRCTDLDG Trigger: GCCGTCCAAGTCCGTGCACCTCACGGTGCTGCGGTGGCGCTGTCAGCGGCGCGGGGGCCAGCGCTGCGGCTGGATTCCCATCCAGTACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CCA 90 bp | CGCGCAGCGCCGGCTCCCACCGGGGCGGAAGAAAGGCACACAAGTTaGCCGCAACTCCTCTCCCGGGTCTACTGGGGAAGGCGGCCGCGG | + |
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Preference number: 5 (lower is better) Translates to: RAAPAPTGAEERHTS*PQLLSRVYWGRRPR Trigger: CCGCGGCCGCCTTCCCCAGTAGACCCGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTCTTCCGCCCCGGTGGGAGCCGGCGCTGCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 90 bp | CTCTCGCTGCTCTTCGTCCGGCCGCTCTGTGCAAGCGCCGCTGGCTaGGCTGGTTCTAGGGGCACTTCCCTCCGCCTGCTCCGGGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: LSLLFVRPLCASAAG*AGSRGTSLRLLRAP Trigger: CGGAGCCCGGAGCAGGCGGAGGGAAGTGCCCCTAGAACCAGCTCAGCCAGCGGCGCTTGCACAGAGCGGCCGGACGAAGAGCAGCGAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | AGGCGGTGCAGGGGGCGTCGGTGGGGATCGATCAAGTGTCCGGGTGCGGGCAGGCTTAGGCGCTGCTTCTaGCCCTGGGCCAAGCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: RRCRGRRWGSIKCPGAGRLRRCF*PWAKPS Trigger: CGAGGGCTTGGCCCAGGGCAAGAAGCAGCGCCTAAG...CCTGCCCGCACCCGGACACTTGATCGATCCCCACCGACGCCCCCTGCACCGCCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 90 bp | GCTGCTTCTTGCCCTGGGCCAAGCCCTCGGAGAACTCTAGCCCTTTaGTCTCGCTCGGCATGGCCCCCGACGGCCGCTGCCGCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AASCPGPSPRRTLAL*SRSAWPPTAAAAAA Trigger: AGCTGCTGCGGCAGCGGCCGTCGGGGGCCATGCCGAGCGAGATCAAAGGGCTAGAGTTCTCCGAGGGCTTGGCCCAGGGCAAGAAGCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 90 bp | ACGGCTTGCACACCATGCCCTCGGGCACGGAGCACGAGCGCTTACTaGAGCAGCTGCCCACCTTCACGTAGCGCGGCCAAAAGCGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TACTPCPRARSTSAY*SSCPPSRSAAKSGC Trigger: GCAGCCGCTTTTGGCCGCGCTACGTGAAGGTGGGCAGCTGCTTCAGTAAGCGCTCGTGCTCCGTGCCCGAGGGCATGGTGTGCAAGCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CCA 90 bp | GAAGAAAGGCACACAAGTTGGCCGCAACTCCTCTCCCGGGTCTACTaGGGAAGGCGGCCGCGGCTGGGCATCCGAAATTACTCCAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: EERHTSWPQLLSRVY*GRRPRLGIRNYSRA Trigger: CGCCCTGGAGTAATTTCGGATGCCCAGCCGCGGCCGCCTTCCCCAGTAGACCCGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 90 bp | CGGCTGCCCAGGTCGTTCCACGCGTACAGCACGGGGCAGAATGTCTaGGACCACAGCCACATCTGTAACTTCCTCCGCAGCTTCTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: RLPRSFHAYSTGQNV*DHSHICNFLRSFLL Trigger: AAGCAAGAAGCTGCGGAGGAAGTTACAGATGTGGCTGTGGTCGCAGACATTCTGCCCCGTGCTGTACGCGTGGAACGACCTGGGCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAATCCACCAGGGGCAGGTaGTCGCTGGGTGCCGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VKQCITGTRKLGLCSPEKSTRGR*SLGAGR Trigger: CCGCCCGGCACCCAGCGACAACCTGCCCCTGGTGGA...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAAACGGACTTGGACGGCTaGCACACCATGCCCTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: VKQCITGTRKLGLCSPEKTDLDG*HTMPSG Trigger: GCCCGAGGGCATGGTGTGCAAGCCGTCCAAGTCCGT...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | GTTAAACAGTGCATTACAGGAACCAGAAAGCTAGGTCTCTGTAGCCCAGAAAAAGTGAGGTGCACGGACTaGGACGGCTTGCACACCATG | + |
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Preference number: 5 (lower is better) Translates to: VKQCITGTRKLGLCSPEKVRCTD*DGLHTM Trigger: CATGGTGTGCAAGCCGTCCAAGTCCGTGCACCTCAC...TTTTTCTGGGCTACAGAGACCTAGCTTTCTGGTTCCTGTAATGCACTGTTTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCAGAAAGGCACACAAGTaGGCCGCAACTCCTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: ITLNSIASSRSKENQNTFRKAHK*AATPLP Trigger: CGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTCT...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | ATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTCGAGAACTCTAGCCCTTaGATCTCGCTCGGCATGGCC | + |
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Preference number: 5 (lower is better) Translates to: ITLNSIASSRSKENQNTFENSSP*ISLGMA Trigger: GGCCATGCCGAGCGAGATCAAAGGGCTAGAGTTCTC...GAAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS-3UTR CAA 90 bp | AATAACATTGAACTCTATAGCTTCTTCGAGGTCCAAGGAAAACCAAAACACTTTTTCCTCCGCAGCTTCTaGCTTAGGCGCTGCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NNIELYSFFEVQGKPKHFFLRSF*LRRCFL Trigger: CAAGAAGCAGCGCCTAAGCAAGAAGCTGCGGAGGAA...AAAGTGTTTTGGTTTTCCTTGGACCTCGAAGAAGCTATAGAGTTCAATGTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 72 bp | GGGCAGCGCTCCATGCCTCTGGCGCGCGCCCGGGGCTaGTGCTTCGTCCCGCGTCCCCGGAGGAGAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: GQRSMPLARARG*CFVPRPRRRAR Trigger: GCGTGCTCTCCTCCGGGGACGCGGGACGAAGCAGCAGCCCCGGGCGCGCGCCAGAGGCATGGAGCGCTGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 72 bp | CAGCGCTCCATGCCTCTGGCGCGCGCCCGGGGCTGCTaGTTCGTCCCGCGTCCCCGGAGGAGAGCACGCCGA | + |
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Preference number: 6 (lower is better) Translates to: QRSMPLARARGC*FVPRPRRRARR Trigger: TCGGCGTGCTCTCCTCCGGGGACGCGGGACGAAGCAGCAGCCCCGGGCGCGCGCCAGAGGCATGGAGCGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 72 bp | ATGGGAATCCAGCCGCAGCGCTGGCCCCCGCGCCGCTaGCAGCGCCACCGCAGCACCGTGAGGTGCACGGAC | + |
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Preference number: 6 (lower is better) Translates to: MGIQPQRWPPRR*QRHRSTVRCTD Trigger: GTCCGTGCACCTCACGGTGCTGCGGTGGCGCTGTCAGCGGCGCGGGGGCCAGCGCTGCGGCTGGATTCCCAT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CAA 90 bp | TCGCGCAGCGCCGGCTCCCACCGGGGCGGAAGAAAGGCACACAAGTaGGCCGCAACTCCTCTCCCGGGTCTACTGGGGAAGGCGGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SRSAGSHRGGRKAHK*AATPLPGLLGKAAA Trigger: CGCGGCCGCCTTCCCCAGTAGACCCGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTCTTCCGCCCCGGTGGGAGCCGGCGCTGCGCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CAA 90 bp | CGCTGCTTCTTGCCCTGGGCCAAGCCCTCGGAGAACTCTAGCCCTTaGATCTCGCTCGGCATGGCCCCCGACGGCCGCTGCCGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RCFLPWAKPSENSSP*ISLGMAPDGRCRSS Trigger: GCTGCTGCGGCAGCGGCCGTCGGGGGCCATGCCGAGCGAGATCAAAGGGCTAGAGTTCTCCGAGGGCTTGGCCCAGGGCAAGAAGCAGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 72 bp | TGCCCTGGGCCAAGCCCTCGGAGAACTCTAGCCCTTTaGTCTCGCTCGGCATGGCCCCCGACGGCCGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CPGPSPRRTLAL*SRSAWPPTAAA Trigger: GGCAGCGGCCGTCGGGGGCCATGCCGAGCGAGATCAAAGGGCTAGAGTTCTCCGAGGGCTTGGCCCAGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CAA 72 bp | CACCGCAGCACCGTGAGGTGCACGGACTTGGACGGCTaGCACACCATGCCCTCGGGCACGGAGCACGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: HRSTVRCTDLDG*HTMPSGTEHER Trigger: GCGCTCGTGCTCCGTGCCCGAGGGCATGGTGTGCAAGCCGTCCAAGTCCGTGCACCTCACGGTGCTGCGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 72 bp | CTCTTCGTCCGGCCGCTCTGTGCAAGCGCCGCTGGCTaGGCTGGTTCTAGGGGCACTTCCCTCCGCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LFVRPLCASAAG*AGSRGTSLRLL Trigger: GAGCAGGCGGAGGGAAGTGCCCCTAGAACCAGCTCAGCCAGCGGCGCTTGCACAGAGCGGCCGGACGAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CAA 72 bp | TTGCCCTGGGCCAAGCCCTCGGAGAACTCTAGCCCTTaGATCTCGCTCGGCATGGCCCCCGACGGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LPWAKPSENSSP*ISLGMAPDGRC Trigger: GCAGCGGCCGTCGGGGGCCATGCCGAGCGAGATCAAAGGGCTAGAGTTCTCCGAGGGCTTGGCCCAGGGCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 72 bp | AGCTGCCCACCTTCACGTAGCGCGGCCAAAAGCGGCTaGCCAGGTCGTTCCACGCGTACAGCACGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SCPPSRSAAKSG*PGRSTRTARGR Trigger: TCTGCCCCGTGCTGTACGCGTGGAACGACCTGGGCAGCCGCTTTTGGCCGCGCTACGTGAAGGTGGGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CCA 72 bp | CCGGCTCCCACCGGGGCGGAAGAAAGGCACACAAGTTaGCCGCAACTCCTCTCCCGGGTCTACTGGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PAPTGAEERHTS*PQLLSRVYWGR Trigger: CCTTCCCCAGTAGACCCGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTCTTCCGCCCCGGTGGGAGCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CAA 72 bp | GCCGGCTCCCACCGGGGCGGAAGAAAGGCACACAAGTaGGCCGCAACTCCTCTCCCGGGTCTACTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AGSHRGGRKAHK*AATPLPGLLGK Trigger: CTTCCCCAGTAGACCCGGGAGAGGAGTTGCGGCCAACTTGTGTGCCTTTCTTCCGCCCCGGTGGGAGCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 72 bp | ACACCATGCCCTCGGGCACGGAGCACGAGCGCTTACTaGAGCAGCTGCCCACCTTCACGTAGCGCGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TPCPRARSTSAY*SSCPPSRSAAK Trigger: TTTGGCCGCGCTACGTGAAGGTGGGCAGCTGCTTCAGTAAGCGCTCGTGCTCCGTGCCCGAGGGCATGGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CCA 72 bp | CACACAAGTTGGCCGCAACTCCTCTCCCGGGTCTACTaGGGAAGGCGGCCGCGGCTGGGCATCCGAAATTAC | + |
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Preference number: 6 (lower is better) Translates to: HTSWPQLLSRVY*GRRPRLGIRNY Trigger: GTAATTTCGGATGCCCAGCCGCGGCCGCCTTCCCCAGTAGACCCGGGAGAGGAGTTGCGGCCAACTTGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS TCA 72 bp | CCCCCGAGTTCTAGCACGAGCACTTGCACTCGGAAATaGTGGGGTACTGGATGGGAATCCAGCCGCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PPSSSTSTCTRK*WGTGWESSRSA Trigger: AGCGCTGCGGCTGGATTCCCATCCAGTACCCCATCATTTCCGAGTGCAAGTGCTCGTGCTAGAACTCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 72 bp | ACTTCCTCCGCAGCTTCTTGCTTAGGCGCTGCTTCTTaGCCTGGGCCAAGCCCTCGGAGAACTCTAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TSSAASCLGAAS*PGPSPRRTLAL Trigger: AAGGGCTAGAGTTCTCCGAGGGCTTGGCCCAGGGCAAGAAGCAGCGCCTAAGCAAGAAGCTGCGGAGGAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS GCA 72 bp | AGGTCGTTCCACGCGTACAGCACGGGGCAGAATGTCTaGGACCACAGCCACATCTGTAACTTCCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSFHAYSTGQNV*DHSHICNFLRS Trigger: GCTGCGGAGGAAGTTACAGATGTGGCTGTGGTCGCAGACATTCTGCCCCGTGCTGTACGCGTGGAACGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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| CDS CAA 72 bp | AACTTCCTCCGCAGCTTCTTGCTTAGGCGCTGCTTCTaGCCCTGGGCCAAGCCCTCGGAGAACTCTAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: NFLRSFLLRRCF*PWAKPSENSSP Trigger: AGGGCTAGAGTTCTCCGAGGGCTTGGCCCAGGGCAAGAAGCAGCGCCTAAGCAAGAAGCTGCGGAGGAAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332822.6 |
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