RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NODAL (Homo sapiens)

Ensembl gene IDs: ENSG00000156574

Ensembl transcript IDs: ENST00000287139.8, ENST00000414871.1

Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTaGCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTC +
Preference number: 1 (lower is better)
Translates to: EWAAPPLQFWWAEQL*PSLFLLTGLDGYHV
Trigger: GACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR GCA 90 bp ACCATAGAGCAAGTATCTTGCCACCCAGGGCAAGGCCTTCACCACTaGTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTGAG +
Preference number: 1 (lower is better)
Translates to: TIEQVSCHPGQGLHH*WIGSSEASLIAHIE
Trigger: CTCAATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAGGCCTTGCCCTGGGTGGCAAGATACTTGCTCTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CCA 90 bp ATAGAGCAAGTATCTTGCCACCCAGGGCAAGGCCTTCACCACTGCTaGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTGAGAGA +
Preference number: 1 (lower is better)
Translates to: IEQVSCHPGQGLHHC*IGSSEASLIAHIER
Trigger: TCTCTCAATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAGGCCTTGCCCTGGGTGGCAAGATACTTGCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR TCA 90 bp CAGGTCACACACAGACTACTTTGGAGAATACATGAAAGCTATAGGTaGCTTCATCCCACCTCCAAAATACATGCACATATGTCTCAACTT +
Preference number: 1 (lower is better)
Translates to: QVTHRLLWRIHESYR*LHPTSKIHAHMSQL
Trigger: AAGTTGAGACATATGTGCATGTATTTTGGAGGTGGGATGAAGTCACCTATAGCTTTCATGTATTCTCCAAAGTAGTCTGTGTGTGACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CAA 90 bp TTAGCAGAGAACCACTCCAGTGAGCCTCTGGACAAGGCCAGTAGATaGCCACTGGCCAGCCAGAAAGCTGTGGGGCTCCCCCAACCCAGC +
Preference number: 2 (lower is better)
Translates to: LAENHSSEPLDKASR*PLASQKAVGLPQPS
Trigger: GCTGGGTTGGGGGAGCCCCACAGCTTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGTCCAGAGGCTCACTGGAGTGGTTCTCTGCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CAA 90 bp TCGCACAGCTTCCAGTGGCTGAGCTGTGACCATAGAGCAAGTATCTaGCCACCCAGGGCAAGGCCTTCACCACTGCTGGATAGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: SHSFQWLSCDHRASI*PPRARPSPLLDRKL
Trigger: GAGCTTCCTATCCAGCAGTGGTGAAGGCCTTGCCCTGGGTGGCAAGATACTTGCTCTATGGTCACAGCTCAGCCACTGGAAGCTGTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR-3UTR CCA 90 bp CTTCACCACTGCTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTGAGCATGGCCGGTCCTCTTaGATGAGTTCCTGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: LHHCWIGSSEASLIAHIEHGRSS*MSSCLC
Trigger: GCAGAGGCAGGAACTCATCCAAGAGGACCGGCCATG...CTCAATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CAA 90 bp AGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTaGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGT +
Preference number: 2 (lower is better)
Translates to: RVGSPSSSVLVGRAT*PLSVSPYWIRWLSC
Trigger: ACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR-3UTR TCA 90 bp ACAATGGCTTTATTGTTGTACAGCTCATTAGCAGAGAACCACTCCAGTGAGCCTTCCCCCAACCCAGCCTaGGGCAATGAGATTGACGGA +
Preference number: 2 (lower is better)
Translates to: TMALLLYSSLAENHSSEPSPNPA*GNEIDG
Trigger: TCCGTCAATCTCATTGCCTCAGGCTGGGTTGGGGGA...AGGCTCACTGGAGTGGTTCTCTGCTAATGAGCTGTACAACAATAAAGCCATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR-3UTR GCA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGCCCAGCCTTCCAGAGTaGAGGCAAATCCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQPSLPE*RQIQSP
Trigger: GGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGG...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR-3UTR GCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATCCCAGCCTTCCAGAGTaGAGGCAAATCCAGTCTCCC +
Preference number: 2 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHPSLPE*RQIQSP
Trigger: GGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGG...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR-3UTR CCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTCCTTACTGGATTAGATaGTTATCATGTCTTCCAGGA +
Preference number: 2 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLPYWIR*LSCLPG
Trigger: TCCTGGAAGACATGATAACCATCTAATCCAGTAAGG...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR-3UTR CCA 90 bp ACTTCATCCCACCTCCAAAATACATGCACATATGTCTCAACTTTCACATACAGTCCTCTTCAGTTCTGGTaGGCAGAGCAACTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: TSSHLQNTCTYVSTFTYSPLQFW*AEQLCP
Trigger: GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGG...ACTGTATGTGAAAGTTGAGACATATGTGCATGTATTTTGGAGGTGGGATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR-3UTR GCA 90 bp GAGGGGGACAGGTCACACACAGACTACTTTGGAGAATACATGAAAGCTATAGGTCCAGTAAAGAACTCATaGACTTGTGCTTTTCCTTGC +
Preference number: 2 (lower is better)
Translates to: EGDRSHTDYFGEYMKAIGPVKNS*TCAFPC
Trigger: GCAAGGAAAAGCACAAGTGCATGAGTTCTTTACTGG...ACCTATAGCTTTCATGTATTCTCCAAAGTAGTCTGTGTGTGACCTGTCCCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR GCA 72 bp ACCACTCCAGTGAGCCTCTGGACAAGGCCAGTAGATTaGCACTGGCCAGCCAGAAAGCTGTGGGGCTCCCCC +
Preference number: 3 (lower is better)
Translates to: TTPVSLWTRPVD*HWPARKLWGSP
Trigger: GGGGGAGCCCCACAGCTTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGTCCAGAGGCTCACTGGAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CCA 72 bp CCAGTGAGCCTCTGGACAAGGCCAGTAGATTGCCACTaGCCAGCCAGAAAGCTGTGGGGCTCCCCCAACCCA +
Preference number: 3 (lower is better)
Translates to: PVSLWTRPVDCH*PARKLWGSPNP
Trigger: TGGGTTGGGGGAGCCCCACAGCTTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGTCCAGAGGCTCACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR TCA 72 bp TCACCAGCGTTCCTTTTACAAGTGGAGACTGGACAGTaGATTGCTCACCTGAGGTCGCACAGCTTCCAGTGG +
Preference number: 3 (lower is better)
Translates to: SPAFLLQVETGQ*IAHLRSHSFQW
Trigger: CCACTGGAAGCTGTGCGACCTCAGGTGAGCAATTCACTGTCCAGTCTCCACTTGTAAAAGGAACGCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR GCA 72 bp GCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTaGCCCTCTCTGTTTCTCCTTACTGGATTAGATGGT +
Preference number: 3 (lower is better)
Translates to: APPLQFWWAEQL*PSLFLLTGLDG
Trigger: ACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR GCA 72 bp CAAGTATCTTGCCACCCAGGGCAAGGCCTTCACCACTaGTGGATAGGAAGCTCAGAGGCCTCATTAATAGCA +
Preference number: 3 (lower is better)
Translates to: QVSCHPGQGLHH*WIGSSEASLIA
Trigger: TGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAGGCCTTGCCCTGGGTGGCAAGATACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR-3UTR CAA 90 bp CTTCACCACTGCTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTGAGGACAAGGCCAGTAGATaGCCACTGGCCAGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: LHHCWIGSSEASLIAHIEDKASR*PLASQK
Trigger: TTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGTC...CTCAATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR-3UTR CAA 90 bp GCACACATTGAGAGACTGAGGTGGATTGTCACCAACTTTAACAAACTCAGGCTGGTGGGCAGAGCAACTTaGCCCCTCTCTGTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: AHIERLRWIVTNFNKLRLVGRAT*PLSVSP
Trigger: AGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCAC...CAGCCTGAGTTTGTTAAAGTTGGTGACAATCCACCTCAGTCTCTCAATGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CCA 72 bp GGACTCTTTTTAATCTATACAGTGATCCTTAATCTTTaGGGAGGGGGACAGGTCACACACAGACTACTTTGG +
Preference number: 3 (lower is better)
Translates to: GLFLIYTVILNL*GGGQVTHRLLW
Trigger: CCAAAGTAGTCTGTGTGTGACCTGTCCCCCTCCCCAAAGATTAAGGATCACTGTATAGATTAAAAAGAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR TCA 72 bp CACAGACTACTTTGGAGAATACATGAAAGCTATAGGTaGCTTCATCCCACCTCCAAAATACATGCACATATG +
Preference number: 3 (lower is better)
Translates to: HRLLWRIHESYR*LHPTSKIHAHM
Trigger: CATATGTGCATGTATTTTGGAGGTGGGATGAAGTCACCTATAGCTTTCATGTATTCTCCAAAGTAGTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGGTACGCCAGAGGGGATaGCGACGAGGGCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: QEFPSLPECRQIQSPSRMVRQRG*RRGLPP
Trigger: CGGGGGCAGCCCTCGTCGCCATCCCCTCTGGCGTAC...CATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGGTGGCAGGCGGTGTaGGGGGCCGCGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLWWQAV*GAAAST
Trigger: AGTGCTGGCCGCGGCCCCCCACACCGCCTGCCACCA...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGCCTGTAGGCTGCGGATaGTGTCTGCCCTCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQPVGCG*CLPSAA
Trigger: CGCTGCCGAGGGCAGACATCATCCGCAGCCTACAGG...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
3UTR CAA 72 bp AACCACTCCAGTGAGCCTCTGGACAAGGCCAGTAGATaGCCACTGGCCAGCCAGAAAGCTGTGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NHSSEPLDKASR*PLASQKAVGLP
Trigger: GGGGAGCCCCACAGCTTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGTCCAGAGGCTCACTGGAGTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp ATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGTACGCAGGAGCGCAGTaGCCACCGTCGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: IYRVGSPSSSVLVGRATLYAGAQ*PPSQHP
Trigger: CGGGTGCTGCGACGGTGGCCACTGCGCTCCTGCGTA...CAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp GTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTCTCTGGCCTTCACCACTGCTaGATAGGAAGCTCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VGSPSSSVLVGRATLPLSGLHHC*IGSSEA
Trigger: GGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAGGCC...AGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGAGCAGCCTCTGTGCTTaGCCAGACTCCACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQSSLCA*PDSTEP
Trigger: GGGCTCAGTGGAGTCTGGCCAAGCACAGAGGCTGCT...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp ACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCAGTCCACCTGGAACTTaGCCTTCCGACACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: TEWAAPPLQFWWAEQLCPSPPGT*PSDTVD
Trigger: GTCAACTGTGTCGGAAGGTCAAGTTCCAGGTGGACT...GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp GTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTCTCTGCAAACGTCCAGTTCTaGCCATCCACTGCCACATCT +
Preference number: 4 (lower is better)
Translates to: VGSPSSSVLVGRATLPLSANVQF*PSTATS
Trigger: AGATGTGGCAGTGGATGGGCAGAACTGGACGTTTGC...AGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp GGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGTCCAGCTGTCTGAAGCCTaGTCTGTGTCGGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GVSQPSRVQANPVSLQDVQLSEA*SVSGFG
Trigger: GCCAAAGCCCGACACAGAGCAGGCTTCAGACAGCTG...GACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCGCTACCCTGGACATCTaGTTCTCCAGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSATLDI*FSRAPG
Trigger: CCCTGGGGCCCTGGAGAAGCAGATGTCCAGGGTAGC...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTCCACCCAGCTGCCTCTaGTCCTGCGAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLPPSCL*SCERLE
Trigger: CTCCAACCTCTCGCAGGAGCAGAGGCAGCTGGGTGG...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGCCCAGCCTTCCAGAGTaGAGGCAAATCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQPSLPE*RQIQSP
Trigger: GGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGG...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp GTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTCTCTACAAGGCCAGTAGATTaGCACTGGCCAGCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VGSPSSSVLVGRATLPLSTRPVD*HWPARK
Trigger: CTTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGT...AGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp GAGGGGGACAGGTCACACACAGACTACTTTGGAGAATACATGAAAGCTATAGGTTGGTGGCAGGCGGTGTaGGGGGCCGCGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: EGDRSHTDYFGEYMKAIGWWQAV*GAAAST
Trigger: AGTGCTGGCCGCGGCCCCCCACACCGCCTGCCACCA...ACCTATAGCTTTCATGTATTCTCCAAAGTAGTCTGTGTGTGACCTGTCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCACTTCCCACAGCAAGGTaGACCCACCCAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSRSFPAFQSAGKSSLPPLPTAR*THPAAS
Trigger: AGAGGCAGCTGGGTGGGTCCACCTTGCTGTGGGAAG...TGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGGCATGCTCAGCGGCTTaGTCTTCACTGGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: QEFPSLPECRQIQSPSRMACSAA*SSLGHN
Trigger: GTTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGC...CATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGCATGCTCAGCGGCTTaGTCTTCACTGGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQACSAA*SSLGHN
Trigger: GTTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGC...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp ACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTCGCACAGCTTCCAGTaGCTGAGCTGTGACCATAGA +
Preference number: 4 (lower is better)
Translates to: TEWAAPPLQFWWAEQLCPSHSFQ*LSCDHR
Trigger: TCTATGGTCACAGCTCAGCCACTGGAAGCTGTGCGA...GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp TTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCGGAGCTCAGCCCATaGCAGATCCTCTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: FTEWAAPPLQFWWAEQLCPELSP*QILLLA
Trigger: AGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGG...GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp ACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCAGGTTGAAGTCCACCTaGAACTTGACCTTCCGACAC +
Preference number: 4 (lower is better)
Translates to: TEWAAPPLQFWWAEQLCPRLKST*NLTFRH
Trigger: GTGTCGGAAGGTCAAGTTCCAGGTGGACTTCAACCT...GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp CAGACTGACGCAGGGATGTCTTCTGTAACCCAACATGGCCGGTCCTCTTGGATGCTTCTGTCTGGCAAGTaGTGTCGACGGTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QTDAGMSSVTQHGRSSWMLLSGK*CRRCLL
Trigger: CAAGAGGCACCGTCGACATCACTTGCCAGACAGAAG...CATCCAAGAGGACCGGCCATGTTGGGTTACAGAAGACATCCCTGCGTCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTAGAGAACCACTCCAGTaGGCCTCTGGACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLREPLQ*ASGQGQ
Trigger: CTGGCCTTGTCCAGAGGCTCACTGGAGTGGTTCTCT...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp ACAATGGCTTTATTGTTGTACAGCTCATTAGCAGAGAACCACTCCAGTGAGCCTGATGGCGACGAGGGCTaGCCCCGCGTACGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TMALLLYSSLAENHSSEPDGDEG*PRVRRS
Trigger: GCTCCTGCGTACGCGGGGGCAGCCCTCGTCGCCATC...AGGCTCACTGGAGTGGTTCTCTGCTAATGAGCTGTACAACAATAAAGCCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCAGCTGTCTGAAGCCTaGTCTGTGTCGGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSQLSEA*SVSGFG
Trigger: GCCAAAGCCCGACACAGAGCAGGCTTCAGACAGCTG...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGTCCCTCCTCTTCAGTTCTaGTGGGCAGAGCAACTTTGC +
Preference number: 4 (lower is better)
Translates to: GVSQPSRVQANPVSLQDVPPLQF*WAEQLC
Trigger: GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGG...GACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
3UTR CAA 72 bp AGGGATGTCTTCTGTAACCCAACATGGCCGGTCCTCTaGGATGAGTTCCTGCCTCTGCCTTCACAGGCACCA +
Preference number: 4 (lower is better)
Translates to: RDVFCNPTWPVL*DEFLPLPSQAP
Trigger: TGGTGCCTGTGAAGGCAGAGGCAGGAACTCATCCAAGAGGACCGGCCATGTTGGGTTACAGAAGACATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCAATCTCAATGGCAAGTaGGCCCTCAGTGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSNLNGK*ALSGEV
Trigger: GACCTCCCCACTGAGGGCTCACTTGCCATTGAGATT...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGATAGAGCAAGTATCTTaGCACCCAGGGCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQIEQVS*HPGQGL
Trigger: AAGGCCTTGCCCTGGGTGGCAAGATACTTGCTCTAT...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGGGTGGAAAATCTCAATaGCAAGTGAGCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QEFPSLPECRQIQSPSRMGGKSQ*QVSPQW
Trigger: CCACTGAGGGCTCACTTGCCATTGAGATTTTCCACC...CATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp ACAATGGCTTTATTGTTGTACAGCTCATTAGCAGAGAACCACTCCAGTGAGCCTGACAGCTGTCCCTCCTaGGCCCGCCAGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TMALLLYSSLAENHSSEPDSCPS*ARQELS
Trigger: CGAGAGCTCCTGGCGGGCCCAGGAGGGACAGCTGTC...AGGCTCACTGGAGTGGTTCTCTGCTAATGAGCTGTACAACAATAAAGCCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACAGCTGTCCCTCCTaGGCCCGCCAGGAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQDSCPS*ARQELS
Trigger: CGAGAGCTCCTGGCGGGCCCAGGAGGGACAGCTGTC...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGTCGGATGTATGCATGGTTaGTCGGATGAAACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GVSQPSRVQANPVSLQDVGCMHG*SDETPP
Trigger: GGGAGGAGTTTCATCCGACCAACCATGCATACATCC...GACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GGCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCACCAGCCAGAAAGCTGTaGGGCTCCCCCAACCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRATLPLSVSPYWIRWLSPARKL*GSPNPA
Trigger: GGCTGGGTTGGGGGAGCCCCACAGCTTTCTGGCTGG...TGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTCCAGTAGATTGCCACTaGCCAGCCAGAAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLPVDCH*PARKLW
Trigger: CCACAGCTTTCTGGCTGGCCAGTGGCAATCTACTGG...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp ATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCTTCTGTCTGGCAAGTaGTGTCGACGGTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IMSSRSFPAFQSAGKSSLLLSGK*CRRCLL
Trigger: CAAGAGGCACCGTCGACATCACTTGCCAGACAGAAG...GAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp ATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGAGTCCACCTGGAACTTaGCCTTCCGACACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: IYRVGSPSSSVLVGRATLSPPGT*PSDTVD
Trigger: GTCAACTGTGTCGGAAGGTCAAGTTCCAGGTGGACT...CAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp ATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCGCATGGTTGGTCGGATaGAACTCCTCCCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: IMSSRSFPAFQSAGKSSLAWLVG*NSSPTG
Trigger: TCCTGTTGGGGAGGAGTTTCATCCGACCAACCATGC...GAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp AGGCCTTCACCACTGCTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTCCCCCAACCCAGCCTaGGGCAATGAGATTGACGGA +
Preference number: 4 (lower is better)
Translates to: RPSPLLDRKLRGLINSTHSPNPA*GNEIDG
Trigger: TCCGTCAATCTCATTGCCTCAGGCTGGGTTGGGGGA...ATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATAGGGCCCACCAGGCGTaGAGAAGGAAGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHRAHQA*RRKGRQ
Trigger: CTGCCTGCCCTTCCTTCTGCACGCCTGGTGGGCCCT...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp CCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTTGCTGCGGATGATGTCTaGCCTCGGCAGCGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: PSLFLLTGLDGYHVFQEFAADDV*PRQRVA
Trigger: CGCGACCCGCTGCCGAGGGCAGACATCATCCGCAGC...AAACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp ATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGGCAAACGTCCAGTTCTaGCCATCCACTGCCACATCT +
Preference number: 4 (lower is better)
Translates to: IYRVGSPSSSVLVGRATLANVQF*PSTATS
Trigger: AGATGTGGCAGTGGATGGGCAGAACTGGACGTTTGC...CAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCTGGGCAGAGCAACTTTaGCCCTCTCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTEWAAPPLQFWWAEQLCWAEQL*PSLFLL
Trigger: AAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCA...GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGTCGGGCTTTGGCTGGTaGAAAATCTCAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQSGFGW*KISMAS
Trigger: ACTTGCCATTGAGATTTTCCACCAGCCAAAGCCCGA...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCACTTGGAGAGAGGCCTaGTCACCTCCAAAACCATGC +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSTWREA*SPPKPC
Trigger: GCATGGTTTTGGAGGTGACCAGGCCTCTCTCCAAGT...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp ATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCGGCTTGGTCTTCACTaGGGCACAACAAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: IMSSRSFPAFQSAGKSSLRLGLH*GTTSGR
Trigger: CCTTCCACTTGTTGTGCCCCAGTGAAGACCAAGCCG...GAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCACTCCAGTGAGCCTCTaGACAAGGCCAGTAGATTGC +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSTPVSL*TRPVDC
Trigger: GCAATCTACTGGCCTTGTCCAGAGGCTCACTGGAGT...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp ATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGTTCACAGGCACCAGCTaGCCCAGGAGAACTAGACAA +
Preference number: 4 (lower is better)
Translates to: IYRVGSPSSSVLVGRATLFTGTS*PRRTRQ
Trigger: TTGTCTAGTTCTCCTGGGCCAGCTGGTGCCTGTGAA...CAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCGTGAATAGGTCCATCTaGAACCGCTCTAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSVNRSI*NRSKQL
Trigger: CAGCTGCTTAGAGCGGTTTCAGATGGACCTATTCAC...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGATCATGTCTTTATGGTaGTCTAGGAGCACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQIMSLW*SRSTLP
Trigger: TGGCAGAGTGCTCCTAGATCACCATAAAGACATGAT...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp TTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCACACATTGAGAGACTaGGGTGGATTGTCACCAACT +
Preference number: 4 (lower is better)
Translates to: FTEWAAPPLQFWWAEQLCHTLRD*GGLSPT
Trigger: AGTTGGTGACAATCCACCTCAGTCTCTCAATGTGTG...GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp CAGACTGACGCAGGGATGTCTTCTGTAACCCAACATGGCCGGTCCTCTTGGATGTATCCACATACAGCATaGTCAGCGGCTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTDAGMSSVTQHGRSSWMYPHTA*SAAWSS
Trigger: TGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATA...CATCCAAGAGGACCGGCCATGTTGGGTTACAGAAGACATCCCTGCGTCAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATCTAGGAGCACTCTaGCATTATCCACATACAGCA +
Preference number: 4 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQDLGAL*HYPHTA
Trigger: TGCTGTATGTGGATAATGGCAGAGTGCTCCTAGATC...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGGGCAGAGCAACTTTaGCCCTCTCTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLWAEQL*PSLFLL
Trigger: AAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCA...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCAGGAAGGGCAGGCAGTaGGCGTGCATGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLCPSLFLLTGLDGYHVFRKGRQ*ACMVGW
Trigger: CCAGCCCACCATGCACGCCCACTGCCTGCCCTTCCT...GAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp ACTTCATCCCACCTCCAAAATACATGCACATATGTCTCAACTTTCACATACAGTGTCGCAGCACCCGCCTaGAGTAGGGCCCACCAGGCG +
Preference number: 4 (lower is better)
Translates to: TSSHLQNTCTYVSTFTYSVAAPA*SRAHQA
Trigger: CGCCTGGTGGGCCCTACTCCAGGCGGGTGCTGCGAC...ACTGTATGTGAAAGTTGAGACATATGTGCATGTATTTTGGAGGTGGGATGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTGGTGGAAAATCTCAATaGCAAGTGAGCCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLGGKSQ*QVSPQW
Trigger: CCACTGAGGGCTCACTTGCCATTGAGATTTTCCACC...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTGTGTCGGGCTTTGGCTaGTGGAAAATCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLVSGFG*WKISMA
Trigger: TGCCATTGAGATTTTCCACCAGCCAAAGCCCGACAC...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CAGACTGACGCAGGGATGTCTTCTGTAACCCAACATGGCCGGTCCTCTTGGATGCTCTGTGTCGGGCTTTaGCTGGTGGAAAATCTCAAT +
Preference number: 4 (lower is better)
Translates to: QTDAGMSSVTQHGRSSWMLCVGL*LVENLN
Trigger: ATTGAGATTTTCCACCAGCCAAAGCCCGACACAGAG...CATCCAAGAGGACCGGCCATGTTGGGTTACAGAAGACATCCCTGCGTCAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp GTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTCTCTCCTTACTGGATTAGATaGTTATCATGTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGSPSSSVLVGRATLPLSPYWIR*LSCLPG
Trigger: TCCTGGAAGACATGATAACCATCTAATCCAGTAAGG...AGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp CAGACTGACGCAGGGATGTCTTCTGTAACCCAACATGGCCGGTCCTCTTGGATGATCATGTCTTTATGGTaGTCTAGGAGCACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: QTDAGMSSVTQHGRSSWMIMSLW*SRSTLP
Trigger: TGGCAGAGTGCTCCTAGATCACCATAAAGACATGAT...CATCCAAGAGGACCGGCCATGTTGGGTTACAGAAGACATCCCTGCGTCAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp CCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTTGCTACCCTGGACATCTaGTTCTCCAGGGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLFLLTGLDGYHVFQEFATLDI*FSRAPG
Trigger: CCCTGGGGCCCTGGAGAAGCAGATGTCCAGGGTAGC...AAACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp GCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCACCCAGCTGCCTCTaGTCCTGCGAGAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: ATLPLSVSPYWIRWLSCLPPSCL*SCERLE
Trigger: CTCCAACCTCTCGCAGGAGCAGAGGCAGCTGGGTGG...AAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp CAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCGTCGACGGTGCCTCTTaGCCCACTCCCAGGACAGCT +
Preference number: 4 (lower is better)
Translates to: QLCPSLFLLTGLDGYHVFVDGAS*PTPRTA
Trigger: AGCTGTCCTGGGAGTGGGGCAAGAGGCACCGTCGAC...GAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCAGACTCTGGATGTATaGATGGTTGGTCGGATGAAA +
Preference number: 4 (lower is better)
Translates to: FTEWAAPPLQFWWAEQLCQTLDV*MVGRMK
Trigger: TTTCATCCGACCAACCATGCATACATCCAGAGTCTG...GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCTATCCACATACAGCATaGTCAGCGGCTTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSYPHTA*SAAWSS
Trigger: TGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATA...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGATCTAGGAGCACTCTaGCATTATCCACATACAGCA +
Preference number: 4 (lower is better)
Translates to: SSRSFPAFQSAGKSSLPPDLGAL*HYPHTA
Trigger: TGCTGTATGTGGATAATGGCAGAGTGCTCCTAGATC...TGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGTCAAGGAAAAGGTGACCTaGGACAAAGTGACAGTGAAT +
Preference number: 4 (lower is better)
Translates to: GVSQPSRVQANPVSLQDVKEKVT*DKVTVN
Trigger: ATTCACTGTCACTTTGTCCCAGGTCACCTTTTCCTT...GACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATCTTCCCACAGCAAGGTaGACCCACCCAGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHLPTAR*THPAAS
Trigger: AGAGGCAGCTGGGTGGGTCCACCTTGCTGTGGGAAG...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp TCATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTCGTTTCAGCAGACTCTaGATGTATGCATGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SFTEWAAPPLQFWWAEQLRFSRL*MYAWLV
Trigger: GACCAACCATGCATACATCCAGAGTCTGCTGAAACG...AAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGCTGGGGCACAACAAGTaGAAGGGACTCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQLGHNK*KGLGGA
Trigger: AGCCCCACCGAGTCCCTTCCACTTGTTGTGCCCCAG...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp GCACACATTGAGAGACTGAGGTGGATTGTCACCAACTTTAACAAACTCAGGCTGAATCTCAATGGCAAGTaGGCCCTCAGTGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AHIERLRWIVTNFNKLRLNLNGK*ALSGEV
Trigger: GACCTCCCCACTGAGGGCTCACTTGCCATTGAGATT...CAGCCTGAGTTTGTTAAAGTTGGTGACAATCCACCTCAGTCTCTCAATGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp GGCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCAGCATGGTTGGTCGGATaGAACTCCTCCCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: GRATLPLSVSPYWIRWLSAWLVG*NSSPTG
Trigger: TCCTGTTGGGGAGGAGTTTCATCCGACCAACCATGC...TGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp TTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACCCAGCCTTCCAGAGTaGAGGCAAATCCAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPLSVSPYWIRWLSCLPGPSLPE*RQIQSP
Trigger: GGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGG...TCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp ATTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGGTTCTGCCCATCCACTaGCACATCTTTAGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: IYRVGSPSSSVLVGRATLVLPIH*HIFSLY
Trigger: ATACAGACTAAAGATGTGGCAGTGGATGGGCAGAAC...CAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414871.1
CDS-3UTR CCA 90 bp ATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCTCGGGCTTTGGCTGGTaGAAAATCTCAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: IMSSRSFPAFQSAGKSSLSGFGW*KISMAS
Trigger: ACTTGCCATTGAGATTTTCCACCAGCCAAAGCCCGA...GAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp ACAATGGCTTTATTGTTGTACAGCTCATTAGCAGAGAACCACTCCAGTGAGCCTGGTGCTTCAGCCACTTaGAGAGAGGCCTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: TMALLLYSSLAENHSSEPGASAT*REAWSP
Trigger: AGGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACC...AGGCTCACTGGAGTGGTTCTCTGCTAATGAGCTGTACAACAATAAAGCCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTTCTGGGGCACAACAAGTaGAAGGGACTCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSLFLLTGLDGYHVFQEFLGHNK*KGLGGA
Trigger: AGCCCCACCGAGTCCCTTCCACTTGTTGTGCCCCAG...AAACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTCTCTACACACAGACTACTTTaGAGAATACATGAAAGCTAT +
Preference number: 4 (lower is better)
Translates to: VGSPSSSVLVGRATLPLSTHRLL*RIHESY
Trigger: ATAGCTTTCATGTATTCTCCAAAGTAGTCTGTGTGT...AGAGAGGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATCATGGCCGGTCCTCTTaGATGAGTTCCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHHGRSS*MSSCLC
Trigger: GCAGAGGCAGGAACTCATCCAAGAGGACCGGCCATG...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCTTTACAAGTGGAGACTaGACAGTGAATTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: FTEWAAPPLQFWWAEQLCFTSGD*TVNCSP
Trigger: AGGTGAGCAATTCACTGTCCAGTCTCCACTTGTAAA...GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTGTGGAGACTGGACAGTaGATTGCTCACCTGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVVETGQ*IAHLRS
Trigger: CGACCTCAGGTGAGCAATTCACTGTCCAGTCTCCAC...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp CAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCCGGAGCTCAGCCCATaGCAGATCCTCTTGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QLCPSLFLLTGLDGYHVFPELSP*QILLLA
Trigger: AGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGG...GAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CTTCACCACTGCTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTGAGGCCAGATCCTCTTGTTaGCTCAGGAAGGAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LHHCWIGSSEASLIAHIEARSSC*LRKEKS
Trigger: TGACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGC...CTCAATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCGGTGCTTCAGCCACTTaGAGAGAGGCCTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: QLCPSLFLLTGLDGYHVFGASAT*REAWSP
Trigger: AGGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACC...GAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CTTCACCACTGCTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATTGAGCAGTTGACTTCTGTCTaGCAAGTGATGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: LHHCWIGSSEASLIAHIEQLTSV*QVMSTV
Trigger: CACCGTCGACATCACTTGCCAGACAGAAGTCAACTG...CTCAATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACGGCTTGGTCTTCACTaGGGCACAACAAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPLSVSPYWIRWLSCLPGRLGLH*GTTSGR
Trigger: CCTTCCACTTGTTGTGCCCCAGTGAAGACCAAGCCG...TCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATCCTCTTCAGTTCTGGTaGGCAGAGCAACTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHPLQFW*AEQLCP
Trigger: GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGG...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp GCACACATTGAGAGACTGAGGTGGATTGTCACCAACTTTAACAAACTCAGGCTGTTGGCCAGACTCCACTaGGCCCTTCATTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: AHIERLRWIVTNFNKLRLLARLH*ALHLQS
Trigger: ACTCTGTAAATGAAGGGCTCAGTGGAGTCTGGCCAA...CAGCCTGAGTTTGTTAAAGTTGGTGACAATCCACCTCAGTCTCTCAATGTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp GCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTTCTGCCGAAGCAGACTaGCGCAGGGATGTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ATLPLSVSPYWIRWLSCLSAEAD*RRDVFC
Trigger: ACAGAAGACATCCCTGCGTCAGTCTGCTTCGGCAGA...AAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp GCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTATGAGTTCCTGCCTCTaGCTTCACAGGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: ATLPLSVSPYWIRWLSCLMSSCL*LHRHQL
Trigger: CAGCTGGTGCCTGTGAAGGCAGAGGCAGGAACTCAT...AAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTACTTGGAGAGAGGCCTaGTCACCTCCAAAACCATGC +
Preference number: 4 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVTWREA*SPPKPC
Trigger: GCATGGTTTTGGAGGTGACCAGGCCTCTCTCCAAGT...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTTCCTCTTCAGTTCTGGTaGGCAGAGCAACTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSLFLLTGLDGYHVFQEFPLQFW*AEQLCP
Trigger: GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGG...AAACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTCCTCCTCTTCAGTTCTaGTGGGCAGAGCAACTTTGC +
Preference number: 4 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVPPLQF*WAEQLC
Trigger: GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGG...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GAGGGGGACAGGTCACACACAGACTACTTTGGAGAATACATGAAAGCTATAGGTGTGATCCTTAATCTTTaGGGAGGGGGACAGGTCACA +
Preference number: 4 (lower is better)
Translates to: EGDRSHTDYFGEYMKAIGVILNL*GGGQVT
Trigger: TGTGACCTGTCCCCCTCCCCAAAGATTAAGGATCAC...ACCTATAGCTTTCATGTATTCTCCAAAGTAGTCTGTGTGTGACCTGTCCCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR TCA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGTGAATAGGTCCATCTaGAACCGCTCTAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQVNRSI*NRSKQL
Trigger: CAGCTGCTTAGAGCGGTTTCAGATGGACCTATTCAC...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATTTGGCCAGACTCCACTaGGCCCTTCATTTACAGAGT +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHLARLH*ALHLQS
Trigger: ACTCTGTAAATGAAGGGCTCAGTGGAGTCTGGCCAA...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp GCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTAGTGAATTGCTCACCTaGGGTCGCACAGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ATLPLSVSPYWIRWLSCLSELLT*GRTASS
Trigger: ACTGGAAGCTGTGCGACCTCAGGTGAGCAATTCACT...AAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp GCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTTCTTGGATGAGTTCCTaGCTCTGCCTTCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: ATLPLSVSPYWIRWLSCLSWMSS*LCLHRH
Trigger: GTGCCTGTGAAGGCAGAGGCAGGAACTCATCCAAGA...AAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATCAGTTGACTTCTGTCTaGCAAGTGATGTCGACGGTG +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHQLTSV*QVMSTV
Trigger: CACCGTCGACATCACTTGCCAGACAGAAGTCAACTG...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTAGGTTGAAGTCCACCTaGAACTTGACCTTCCGACAC +
Preference number: 4 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVRLKST*NLTFRH
Trigger: GTGTCGGAAGGTCAAGTTCCAGGTGGACTTCAACCT...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTGGATGTATGCATGGTTaGTCGGATGAAACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVGCMHG*SDETPP
Trigger: GGGAGGAGTTTCATCCGACCAACCATGCATACATCC...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATTTCTGTAACCCAACATaGCCGGTCCTCTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHFCNPT*PVLLDE
Trigger: CTCATCCAAGAGGACCGGCCATGTTGGGTTACAGAA...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTTGTGTCGGGCTTTGGCTaGTGGAAAATCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: PSLFLLTGLDGYHVFQEFVSGFG*WKISMA
Trigger: TGCCATTGAGATTTTCCACCAGCCAAAGCCCGACAC...AAACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp TTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACTCTGTGTCGGGCTTTaGCTGGTGGAAAATCTCAAT +
Preference number: 4 (lower is better)
Translates to: LPLSVSPYWIRWLSCLPGLCVGL*LVENLN
Trigger: ATTGAGATTTTCCACCAGCCAAAGCCCGACACAGAG...TCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp TTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACGTTTCAGCAGACTCTaGATGTATGCATGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LPLSVSPYWIRWLSCLPGRFSRL*MYAWLV
Trigger: GACCAACCATGCATACATCCAGAGTCTGCTGAAACG...TCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp GCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATCAGACTCTGGATGTATaGATGGTTGGTCGGATGAAA +
Preference number: 4 (lower is better)
Translates to: AEQLCPSLFLLTGLDGYHQTLDV*MVGRMK
Trigger: TTTCATCCGACCAACCATGCATACATCCAGAGTCTG...ATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR GCA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGCCAGTAAAGAACTCATaGACTTGTGCTTTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQPVKNS*TCAFPC
Trigger: GCAAGGAAAAGCACAAGTGCATGAGTTCTTTACTGG...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGAAGGAAAAGGTGACCTaGGACAAAGTGACAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQKEKVT*DKVTVN
Trigger: ATTCACTGTCACTTTGTCCCAGGTCACCTTTTCCTT...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR TCA 90 bp ACAATGGCTTTATTGTTGTACAGCTCATTAGCAGAGAACCACTCCAGTGAGCCTATTAATAGCACACATTaGGAGACTGAGGTGGATTGT +
Preference number: 4 (lower is better)
Translates to: TMALLLYSSLAENHSSEPINSTH*ETEVDC
Trigger: ACAATCCACCTCAGTCTCTCAATGTGTGCTATTAAT...AGGCTCACTGGAGTGGTTCTCTGCTAATGAGCTGTACAACAATAAAGCCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp TTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACCTTACTGGATTAGATaGTTATCATGTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPLSVSPYWIRWLSCLPGPYWIR*LSCLPG
Trigger: TCCTGGAAGACATGATAACCATCTAATCCAGTAAGG...TCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CCA 90 bp GAGGGGGACAGGTCACACACAGACTACTTTGGAGAATACATGAAAGCTATAGGTAGGAGAACTAGACAATaGCTTTATTGTTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: EGDRSHTDYFGEYMKAIGRRTRQ*LYCCTA
Trigger: AGCTGTACAACAATAAAGCCATTGTCTAGTTCTCCT...ACCTATAGCTTTCATGTATTCTCCAAAGTAGTCTGTGTGTGACCTGTCCCCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CCA 90 bp CCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTTATTGAGAGACTGAGGTaGATTGTCACCAACTTTAAC +
Preference number: 4 (lower is better)
Translates to: PSLFLLTGLDGYHVFQEFIERLR*IVTNFN
Trigger: GTTAAAGTTGGTGACAATCCACCTCAGTCTCTCAAT...AAACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR GCA 90 bp GCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCACCTCCAAAATACATaGACATATGTCTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: ATLPLSVSPYWIRWLSCLHLQNT*TYVSTF
Trigger: GAAAGTTGAGACATATGTGCATGTATTTTGGAGGTG...AAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 90 bp GAGGGGATGGCGACGAGGGCTGCCCCCGCGTACGCAGGAGCGCAGTaGCCACCGTCGCAGCACCCGCCTGGAGTAGGGCCCACCAGGCGT +
Preference number: 5 (lower is better)
Translates to: EGMATRAAPAYAGAQ*PPSQHPPGVGPTRR
Trigger: ACGCCTGGTGGGCCCTACTCCAGGCGGGTGCTGCGACGGTGGCCACTGCGCTCCTGCGTACGCGGGGGCAGCCCTCGTCGCCATCCCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 90 bp CCCCGCGTACGCAGGAGCGCAGTGGCCACCGTCGCAGCACCCGCCTaGAGTAGGGCCCACCAGGCGTGCAGAAGGAAGGGCAGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: PRVRRSAVATVAAPA*SRAHQACRRKGRQW
Trigger: CCACTGCCTGCCCTTCCTTCTGCACGCCTGGTGGGCCCTACTCCAGGCGGGTGCTGCGACGGTGGCCACTGCGCTCCTGCGTACGCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 90 bp CGGCAGCGGGTCGCGGTAGAGGCTCAGCATGTACGCCAGAGGGGATaGCGACGAGGGCTGCCCCCGCGTACGCAGGAGCGCAGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: RQRVAVEAQHVRQRG*RRGLPPRTQERSGH
Trigger: GTGGCCACTGCGCTCCTGCGTACGCGGGGGCAGCCCTCGTCGCCATCCCCTCTGGCGTACATGCTGAGCCTCTACCGCGACCCGCTGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 90 bp GTCCCTCCTGGGCCCGCCAGGAGCTCTCGGCTTCCCACAGCAAGGTaGACCCACCCAGCTGCCTCTGCTCCTGCGAGAGGTTGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: VPPGPARSSRLPTAR*THPAASAPARGWSR
Trigger: TCTACTCCAACCTCTCGCAGGAGCAGAGGCAGCTGGGTGGGTCCACCTTGCTGTGGGAAGCCGAGAGCTCCTGGCGGGCCCAGGAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 90 bp ATGGCAAGTGAGCCCTCAGTGGGGAGGTCCACAGGGCTGGACAGCTaGAGCCGGAGCTCAGCCCATGCCAGATCCTCTTGTTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: MASEPSVGRSTGLDS*SRSSAHARSSCWLR
Trigger: CCTGAGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGGCTGCAGCTGTCCAGCCCTGTGGACCTCCCCACTGAGGGCTCACTTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 90 bp GACACAGTTGACTTCTGTCTGGCAAGTGATGTCGACGGTGCCTCTTaGCCCACTCCCAGGACAGCTGTCCCTCCTGGGCCCGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: DTVDFCLASDVDGAS*PTPRTAVPPGPARS
Trigger: GCTCCTGGCGGGCCCAGGAGGGACAGCTGTCCTGGGAGTGGGGCAAGAGGCACCGTCGACATCACTTGCCAGACAGAAGTCAACTGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp GGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGTCTGTCGACGGTGCCTCTaGCCCCACTCCCAGGACAGC +
Preference number: 5 (lower is better)
Translates to: GVSQPSRVQANPVSLQDVCRRCL*PHSQDS
Trigger: GCTGTCCTGGGAGTGGGGCAAGAGGCACCGTCGACA...GACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 90 bp CACTCTCCAGCTACCCTGGACATCTGCTTCTCCAGGGCCCCAGGGTaGTTCAGCCACTTGGAGAGAGGCCTGGTCACCTCCAAAACCATG +
Preference number: 5 (lower is better)
Translates to: HSPATLDICFSRAPG*FSHLERGLVTSKTM
Trigger: CATGGTTTTGGAGGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACCCTGGGGCCCTGGAGAAGCAGATGTCCAGGGTAGCTGGAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 90 bp CTGAAGCCTGCTCTGTGTCGGGCTTTGGCTGGTGGAAAATCTCAATaGCAAGTGAGCCCTCAGTGGGGAGGTCCACAGGGCTGGACAGCT +
Preference number: 5 (lower is better)
Translates to: LKPALCRALAGGKSQ*QVSPQWGGPQGWTA
Trigger: AGCTGTCCAGCCCTGTGGACCTCCCCACTGAGGGCTCACTTGCCATTGAGATTTTCCACCAGCCAAAGCCCGACACAGAGCAGGCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp GGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGATGTCAGCATAAGGAGCACATaGGTGGCAGGCGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: GVSQPSRVQANPVSLQDVSIRST*VAGGVG
Trigger: CCCCACACCGCCTGCCACCAATGTGCTCCTTATGCT...GACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp ACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCCCCTGCCAGATCCTCTTGTaGGCTCAGGAAGGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: TEWAAPPLQFWWAEQLCPCQILL*AQEGEV
Trigger: GACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGCA...GGGGCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 90 bp CTGGACAGCTGCAGCCGGAGCTCAGCCCATGCCAGATCCTCTTGTTaGCTCAGGAAGGAGAAGTCAAAAGCAAACGTCCAGTTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LDSCSRSSAHARSSC*LRKEKSKANVQFCP
Trigger: TGGGCAGAACTGGACGTTTGCTTTTGACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGGCTGCAGCTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 90 bp GAAGTCCACCTGGAACTTGACCTTCCGACACAGTTGACTTCTGTCTaGCAAGTGATGTCGACGGTGCCTCTTGCCCCACTCCCAGGACAG +
Preference number: 5 (lower is better)
Translates to: EVHLELDLPTQLTSV*QVMSTVPLAPLPGQ
Trigger: CTGTCCTGGGAGTGGGGCAAGAGGCACCGTCGACATCACTTGCCAGACAGAAGTCAACTGTGTCGGAAGGTCAAGTTCCAGGTGGACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 90 bp CTAGGAGCACTCTGCCATTATCCACATACAGCATGCTCAGCGGCTTaGTCTTCACTGGGGCACAACAAGTGGAAGGGACTCGGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: LGALCHYPHTACSAA*SSLGHNKWKGLGGA
Trigger: AGCCCCACCGAGTCCCTTCCACTTGTTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATAATGGCAGAGTGCTCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCTCCAGGACAAGGCCAGTAGATaGCCACTGGCCAGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LPGVSQPSRVQANPVSLQDKASR*PLASQK
Trigger: TTTCTGGCTGGCCAGTGGCAATCTACTGGCCTTGTC...CTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CAA 90 bp ATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCAGCATAAGGAGCACATaGGTGGCAGGCGGTGTGGGG +
Preference number: 5 (lower is better)
Translates to: IMSSRSFPAFQSAGKSSLSIRST*VAGGVG
Trigger: CCCCACACCGCCTGCCACCAATGTGCTCCTTATGCT...GAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 90 bp TCTGCCATTATCCACATACAGCATGCTCAGCGGCTTGGTCTTCACTaGGGCACAACAAGTGGAAGGGACTCGGTGGGGCTGGTAACGTTT +
Preference number: 5 (lower is better)
Translates to: SAIIHIQHAQRLGLH*GTTSGRDSVGLVTF
Trigger: AAACGTTACCAGCCCCACCGAGTCCCTTCCACTTGTTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATAATGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp TTTACAGAGTGGGCAGCCCCTCCTCTTCAGTTCTGGTGGGCAGAGCAACTTTGCGACCTTCCGACACAGTaGACTTCTGTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: FTEWAAPPLQFWWAEQLCDLPTQ*TSVWQV
Trigger: CACTTGCCAGACAGAAGTCAACTGTGTCGGAAGGTC...GCAAAGTTGCTCTGCCCACCAGAACTGAAGAGGAGGGGCTGCCCACTCTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGTGTCGACGGTGCCTCTaGCCCCACTCCCAGGACAGC +
Preference number: 5 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQCRRCL*PHSQDS
Trigger: GCTGTCCTGGGAGTGGGGCAAGAGGCACCGTCGACA...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp TCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCGACCTTCCGACACAGTaGACTTCTGTCTGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: SCLPGVSQPSRVQANPVSDLPTQ*TSVWQV
Trigger: CACTTGCCAGACAGAAGTCAACTGTGTCGGAAGGTC...GGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp AGGCCTTCACCACTGCTGGATAGGAAGCTCAGAGGCCTCATTAATAGCACACATAGCATGCTCAGCGGCTaGGTCTTCACTGGGGCACAA +
Preference number: 5 (lower is better)
Translates to: RPSPLLDRKLRGLINSTHSMLSG*VFTGAQ
Trigger: TTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGCT...ATGTGTGCTATTAATGAGGCCTCTGAGCTTCCTATCCAGCAGTGGTGAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS TCA 90 bp AAGGAAAAGGTGACCTGGGACAAAGTGACAGTGAATAGGTCCATCTaGAACCGCTCTAAGCAGCTGTCTGAAGCCTGCTCTGTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: KEKVTWDKVTVNRSI*NRSKQLSEACSVSG
Trigger: GCCCGACACAGAGCAGGCTTCAGACAGCTGCTTAGAGCGGTTTCAGATGGACCTATTCACTGTCACTTTGTCCCAGGTCACCTTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp ATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTGCAGGCAAATCCAGTCTCCCATGCCAGATCCTCTaGTTGGCTCAGGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: IMSSRSFPAFQSAGKSSLPCQIL*LAQEGE
Trigger: TTCTCCTTCCTGAGCCAACAAGAGGATCTGGCATGG...GAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCGGGTGCTTCAGCCACTaGGAGAGAGGCCTGGTCACC +
Preference number: 5 (lower is better)
Translates to: QLCPSLFLLTGLDGYHVFGCFSH*ERGLVT
Trigger: GGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACCC...GAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp GGCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCAACATGGCCGGTCCTCTaGGATGAGTTCCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GRATLPLSVSPYWIRWLSTWPVL*DEFLPL
Trigger: CAGAGGCAGGAACTCATCCAAGAGGACCGGCCATGT...TGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CAA 90 bp GGCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCACCCCATCCGATCAGGTaGAAGTCCACCTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GRATLPLSVSPYWIRWLSPHPIR*KSTWNL
Trigger: CAAGTTCCAGGTGGACTTCAACCTGATCGGATGGGG...TGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTAGCATGCTCAGCGGCTaGGTCTTCACTGGGGCACAA +
Preference number: 5 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVSMLSG*VFTGAQ
Trigger: TTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGCT...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTCCCCATCCGATCAGGTaGAAGTCCACCTGGAACTTG +
Preference number: 5 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVPHPIR*KSTWNL
Trigger: CAAGTTCCAGGTGGACTTCAACCTGATCGGATGGGG...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGAGTTGTGGGCAGAGCAACTTaGCCCCTCTCTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PLSVSPYWIRWLSCLPGVVGRAT*PLSVSP
Trigger: AGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCAC...AACTCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp TTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGGACATAGAGCAAGTATCTaGCCACCCAGGGCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: LPLSVSPYWIRWLSCLPGHRASI*PPRARP
Trigger: AGGCCTTGCCCTGGGTGGCAAGATACTTGCTCTATG...TCCTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS TCA 90 bp TGTCATCAGAGGCACCCACATTCTTCCACGATCATGTCTTTATGGTaGTCTAGGAGCACTCTGCCATTATCCACATACAGCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CHQRHPHSSTIMSLW*SRSTLPLSTYSMLS
Trigger: GCTGAGCATGCTGTATGTGGATAATGGCAGAGTGCTCCTAGATCACCATAAAGACATGATCGTGGAAGAATGTGGGTGCCTCTGATGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 90 bp CACATTCTTCCACGATCATGTCTTTATGGTGATCTAGGAGCACTCTaGCATTATCCACATACAGCATGCTCAGCGGCTTGGTCTTCACTG +
Preference number: 5 (lower is better)
Translates to: HILPRSCLYGDLGAL*HYPHTACSAAWSSL
Trigger: CAGTGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATAATGGCAGAGTGCTCCTAGATCACCATAAAGACATGATCGTGGAAGAATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGTGCCAGATCCTCTTGTaGGCTCAGGAAGGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQCQILL*AQEGEV
Trigger: GACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGCA...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp CTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCATGTCTTCCAGCCATGCCAGATCCTCTaGTTGGCTCAGGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LCPSLFLLTGLDGYHVFQPCQIL*LAQEGE
Trigger: TTCTCCTTCCTGAGCCAACAAGAGGATCTGGCATGG...CTGGAAGACATGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS-3UTR CAA 90 bp ACTTCATCCCACCTCCAAAATACATGCACATATGTCTCAACTTTCACATACAGTGTGGGCAGAGCAACTTaGCCCCTCTCTGTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TSSHLQNTCTYVSTFTYSVGRAT*PLSVSP
Trigger: AGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCCCAC...ACTGTATGTGAAAGTTGAGACATATGTGCATGTATTTTGGAGGTGGGATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS-3UTR CAA 90 bp GGCAGAGCAACTTTGCCCCTCTCTGTTTCTCCTTACTGGATTAGATGGTTATCAACAATGGCTTTATTGTaGTACAGCTCATTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GRATLPLSVSPYWIRWLSTMALL*YSSLAE
Trigger: CTCTGCTAATGAGCTGTACAACAATAAAGCCATTGT...TGATAACCATCTAATCCAGTAAGGAGAAACAGAGAGGGGCAAAGTTGCTCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 72 bp GCGACGAGGGCTGCCCCCGCGTACGCAGGAGCGCAGTaGCCACCGTCGCAGCACCCGCCTGGAGTAGGGCCC +
Preference number: 6 (lower is better)
Translates to: ATRAAPAYAGAQ*PPSQHPPGVGP
Trigger: GGGCCCTACTCCAGGCGGGTGCTGCGACGGTGGCCACTGCGCTCCTGCGTACGCGGGGGCAGCCCTCGTCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 72 bp CGCAGGAGCGCAGTGGCCACCGTCGCAGCACCCGCCTaGAGTAGGGCCCACCAGGCGTGCAGAAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RRSAVATVAAPA*SRAHQACRRKG
Trigger: GCCCTTCCTTCTGCACGCCTGGTGGGCCCTACTCCAGGCGGGTGCTGCGACGGTGGCCACTGCGCTCCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS GCA 72 bp CTCAGCATGTACGCCAGAGGGGATGGCGACGAGGGCTaGCCCCGCGTACGCAGGAGCGCAGTGGCCACCGTC +
Preference number: 6 (lower is better)
Translates to: LSMYARGDGDEG*PRVRRSAVATV
Trigger: GACGGTGGCCACTGCGCTCCTGCGTACGCGGGGGCAGCCCTCGTCGCCATCCCCTCTGGCGTACATGCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 72 bp GTCGCGGTAGAGGCTCAGCATGTACGCCAGAGGGGATaGCGACGAGGGCTGCCCCCGCGTACGCAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: VAVEAQHVRQRG*RRGLPPRTQER
Trigger: GCGCTCCTGCGTACGCGGGGGCAGCCCTCGTCGCCATCCCCTCTGGCGTACATGCTGAGCCTCTACCGCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287139.8
CDS CCA 72 bp GGGCCCGCCAGGAGCTCTCGGCTTCCCACAGCAAGGTaGACCCACCCAGCTGCCTCTGCTCCTGCGAGAGGT +
Preference number: 6 (lower is better)
Translates to: GPARSSRLPTAR*THPAASAPARG
Trigger: ACCTCTCGCAGGAGCAGAGGCAGCTGGGTGGGTCCACCTTGCTGTGGGAAGCCGAGAGCTCCTGGCGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 72 bp GCTACCCTGGACATCTGCTTCTCCAGGGCCCCAGGGTaGTTCAGCCACTTGGAGAGAGGCCTGGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: ATLDICFSRAPG*FSHLERGLVTS
Trigger: GGAGGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACCCTGGGGCCCTGGAGAAGCAGATGTCCAGGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 72 bp GACTTCTGTCTGGCAAGTGATGTCGACGGTGCCTCTTaGCCCACTCCCAGGACAGCTGTCCCTCCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: DFCLASDVDGAS*PTPRTAVPPGP
Trigger: GGGCCCAGGAGGGACAGCTGTCCTGGGAGTGGGGCAAGAGGCACCGTCGACATCACTTGCCAGACAGAAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 72 bp TCTGCTTCTCCAGGGCCCCAGGGTGCTTCAGCCACTTaGAGAGAGGCCTGGTCACCTCCAAAACCATGCTGC +
Preference number: 6 (lower is better)
Translates to: SASPGPQGASAT*REAWSPPKPCC
Trigger: GCAGCATGGTTTTGGAGGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACCCTGGGGCCCTGGAGAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 72 bp GCTCTGTGTCGGGCTTTGGCTGGTGGAAAATCTCAATaGCAAGTGAGCCCTCAGTGGGGAGGTCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: ALCRALAGGKSQ*QVSPQWGGPQG
Trigger: GCCCTGTGGACCTCCCCACTGAGGGCTCACTTGCCATTGAGATTTTCCACCAGCCAAAGCCCGACACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 72 bp ATCTGCTTCTCCAGGGCCCCAGGGTGCTTCAGCCACTaGGAGAGAGGCCTGGTCACCTCCAAAACCATGCTG +
Preference number: 6 (lower is better)
Translates to: ICFSRAPGCFSH*ERGLVTSKTML
Trigger: CAGCATGGTTTTGGAGGTGACCAGGCCTCTCTCCAAGTGGCTGAAGCACCCTGGGGCCCTGGAGAAGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 90 bp AGGGCTGGACAGCTGCAGCCGGAGCTCAGCCCATGCCAGATCCTCTaGTTGGCTCAGGAAGGAGAAGTCAAAAGCAAACGTCCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: RAGQLQPELSPCQIL*LAQEGEVKSKRPVL
Trigger: CAGAACTGGACGTTTGCTTTTGACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGGCTGCAGCTGTCCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 90 bp TCTAGGAGCACTCTGCCATTATCCACATACAGCATGCTCAGCGGCTaGGTCTTCACTGGGGCACAACAAGTGGAAGGGACTCGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: SRSTLPLSTYSMLSG*VFTGAQQVEGTRWG
Trigger: GCCCCACCGAGTCCCTTCCACTTGTTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATAATGGCAGAGTGCTCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 90 bp GAAACCGCTCTAAGCAGCTGTCTGAAGCCTGCTCTGTGTCGGGCTTaGGCTGGTGGAAAATCTCAATGGCAAGTGAGCCCTCAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: ETALSSCLKPALCRA*AGGKSQWQVSPQWG
Trigger: TCCCCACTGAGGGCTCACTTGCCATTGAGATTTTCCACCAGCCAAAGCCCGACACAGAGCAGGCTTCAGACAGCTGCTTAGAGCGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 72 bp TGCAGCCGGAGCTCAGCCCATGCCAGATCCTCTTGTTaGCTCAGGAAGGAGAAGTCAAAAGCAAACGTCCAG +
Preference number: 6 (lower is better)
Translates to: CSRSSAHARSSC*LRKEKSKANVQ
Trigger: CTGGACGTTTGCTTTTGACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 72 bp CTGGAACTTGACCTTCCGACACAGTTGACTTCTGTCTaGCAAGTGATGTCGACGGTGCCTCTTGCCCCACTC +
Preference number: 6 (lower is better)
Translates to: LELDLPTQLTSV*QVMSTVPLAPL
Trigger: GAGTGGGGCAAGAGGCACCGTCGACATCACTTGCCAGACAGAAGTCAACTGTGTCGGAAGGTCAAGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 72 bp CAGCTGCAGCCGGAGCTCAGCCCATGCCAGATCCTCTaGTTGGCTCAGGAAGGAGAAGTCAAAAGCAAACGT +
Preference number: 6 (lower is better)
Translates to: QLQPELSPCQIL*LAQEGEVKSKR
Trigger: ACGTTTGCTTTTGACTTCTCCTTCCTGAGCCAACAAGAGGATCTGGCATGGGCTGAGCTCCGGCTGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 90 bp TCCGATCAGGTTGAAGTCCACCTGGAACTTGACCTTCCGACACAGTaGACTTCTGTCTGGCAAGTGATGTCGACGGTGCCTCTTGCCCCA +
Preference number: 6 (lower is better)
Translates to: SDQVEVHLELDLPTQ*TSVWQVMSTVPLAP
Trigger: TGGGGCAAGAGGCACCGTCGACATCACTTGCCAGACAGAAGTCAACTGTGTCGGAAGGTCAAGTTCCAGGTGGACTTCAACCTGATCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CCA 72 bp CTCTGCCATTATCCACATACAGCATGCTCAGCGGCTTaGTCTTCACTGGGGCACAACAAGTGGAAGGGACTC +
Preference number: 6 (lower is better)
Translates to: LCHYPHTACSAA*SSLGHNKWKGL
Trigger: GAGTCCCTTCCACTTGTTGTGCCCCAGTGAAGACCAAGCCGCTGAGCATGCTGTATGTGGATAATGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 72 bp CTAAGCAGCTGTCTGAAGCCTGCTCTGTGTCGGGCTTaGGCTGGTGGAAAATCTCAATGGCAAGTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: LSSCLKPALCRA*AGGKSQWQVSP
Trigger: AGGGCTCACTTGCCATTGAGATTTTCCACCAGCCAAAGCCCGACACAGAGCAGGCTTCAGACAGCTGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS TCA 72 bp TTCAGCAGACTCTGGATGTATGCATGGTTGGTCGGATaGAACTCCTCCCCAACAGGATTAGGACACTCGCCC +
Preference number: 6 (lower is better)
Translates to: FSRLWMYAWLVG*NSSPTGLGHSP
Trigger: GGGCGAGTGTCCTAATCCTGTTGGGGAGGAGTTTCATCCGACCAACCATGCATACATCCAGAGTCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS CAA 72 bp GTTGAAGTCCACCTGGAACTTGACCTTCCGACACAGTaGACTTCTGTCTGGCAAGTGATGTCGACGGTGCCT +
Preference number: 6 (lower is better)
Translates to: VEVHLELDLPTQ*TSVWQVMSTVP
Trigger: AGGCACCGTCGACATCACTTGCCAGACAGAAGTCAACTGTGTCGGAAGGTCAAGTTCCAGGTGGACTTCAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS TCA 72 bp GTGACCTGGGACAAAGTGACAGTGAATAGGTCCATCTaGAACCGCTCTAAGCAGCTGTCTGAAGCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: VTWDKVTVNRSI*NRSKQLSEACS
Trigger: AGAGCAGGCTTCAGACAGCTGCTTAGAGCGGTTTCAGATGGACCTATTCACTGTCACTTTGTCCCAGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 72 bp TATCATGTCTTCCAGGAGTTTCCCAGCCTTCCAGAGTaGAGGCAAATCCAGTCTCCCTCCAGGATGTCATCA +
Preference number: 6 (lower is better)
Translates to: YHVFQEFPSLPE*RQIQSPSRMSS
Trigger: TGATGACATCCTGGAGGGAGACTGGATTTGCCTGCACTCTGGAAGGCTGGGAAACTCCTGGAAGACATGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 72 bp CCACGATCATGTCTTTATGGTGATCTAGGAGCACTCTaGCATTATCCACATACAGCATGCTCAGCGGCTTGG +
Preference number: 6 (lower is better)
Translates to: PRSCLYGDLGAL*HYPHTACSAAW
Trigger: CCAAGCCGCTGAGCATGCTGTATGTGGATAATGGCAGAGTGCTCCTAGATCACCATAAAGACATGATCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1
CDS GCA 72 bp CTCAGGAAGGAGAAGTCAAAAGCAAACGTCCAGTTCTaGCCATCCACTGCCACATCTTTAGTCTGTATCCCC +
Preference number: 6 (lower is better)
Translates to: LRKEKSKANVQF*PSTATSLVCIP
Trigger: GGGGATACAGACTAAAGATGTGGCAGTGGATGGGCAGAACTGGACGTTTGCTTTTGACTTCTCCTTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414871.1
CDS TCA 72 bp AGGCACCCACATTCTTCCACGATCATGTCTTTATGGTaGTCTAGGAGCACTCTGCCATTATCCACATACAGC +
Preference number: 6 (lower is better)
Translates to: RHPHSSTIMSLW*SRSTLPLSTYS
Trigger: GCTGTATGTGGATAATGGCAGAGTGCTCCTAGATCACCATAAAGACATGATCGTGGAAGAATGTGGGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287139.8
ENST00000414871.1