RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NOD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000167207

Ensembl transcript IDs: ENST00000300589.6, ENST00000524712.5, ENST00000526417.6, ENST00000527052.5, ENST00000527070.5, ENST00000529633.5, ENST00000531674.1, ENST00000532206.1, ENST00000534057.1, ENST00000534067.5, ENST00000641284.1, ENST00000646677.1, ENST00000647318.2

Found 1191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCAGCATGTTCTCCACATGGCTGTGGAGCCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTCTCGGGCTGGGTGGAGCGAGTGGGG +
Preference number: 1 (lower is better)
Translates to: VQHVLHMAVEPPDNG*PVTLQVSGWVERVG
Trigger: CCCCACTCGCTCCACCCAGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAACATGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 90 bp CCCATGCCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGACTCTGCAGGTCTCGGGCTGGGTGGA +
Preference number: 1 (lower is better)
Translates to: PMPGPACSPHGCGAS*QWLAGDSAGLGLGG
Trigger: TCCACCCAGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 90 bp GCCTGGGCCACGTGGGAGCCTGGGTCTTACTCGTCCTGGCATCCCTaGGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAATG +
Preference number: 1 (lower is better)
Translates to: AWATWEPGSYSSWHP*AWHSIVPHKDTEGM
Trigger: CATTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGGACGAGTAAGACCCAGGCTCCCACGTGGCCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 90 bp GGACAGCAGCCAGTCCAGGACACTCTCGAAGCCTTCCAGGGACCCTaGGACCAGCAGCTCGACCAGCTGGCTCCTCTGTGCCTGAAAAGC +
Preference number: 1 (lower is better)
Translates to: GQQPVQDTLEAFQGP*DQQLDQLAPLCLKS
Trigger: GCTTTTCAGGCACAGAGGAGCCAGCTGGTCGAGCTGCTGGTCTCAGGGTCCCTGGAAGGCTTCGAGAGTGTCCTGGACTGGCTGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 90 bp GACTGGCTGTCGGCCTGGGCTTCTTGGGCAGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTATTCCAGACGGTGTCCAGAAGGCGC +
Preference number: 1 (lower is better)
Translates to: DWLSAWASWAAAMSF*QAQVPLFQTVSRRR
Trigger: GCGCCTTCTGGACACCGTCTGGAATAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 90 bp GCTTGGGGGACTGGCTGTCGGCCTGGGCTTCTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAGTACCCTTATTCCAGACGGTGTCCA +
Preference number: 1 (lower is better)
Translates to: AWGTGCRPGLLGQPR*ASDRPKYPYSRRCP
Trigger: TGGACACCGTCTGGAATAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTCCCCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CCA 90 bp AAGGGATCTGGGCAGTGTTGCAAAGCAGGGTGGCAGAGGCGAAGCTaGGCCCAGACTTCTAGAGCCCAGCTCGGTGCTCCCACACTTAGC +
Preference number: 1 (lower is better)
Translates to: KGSGQCCKAGWQRRS*AQTSRAQLGAPTLS
Trigger: GCTAAGTGTGGGAGCACCGAGCTGGGCTCTAGAAGTCTGGGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR TCA 90 bp TCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGGAGGATCAGCAGAGGCCAGTCCCAT +
Preference number: 1 (lower is better)
Translates to: STKRHSVNKHIHGPH*PTRKPGRISRGQSH
Trigger: ATGGGACTGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR TCA 90 bp TGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCA +
Preference number: 1 (lower is better)
Translates to: CICPPGRASLLHHRY*GSETEQTPWSSAWP
Trigger: TGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR GCA 90 bp GAGGTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGGGAGGAACCAGAGACGGGGAATGGC +
Preference number: 1 (lower is better)
Translates to: EVTNILNFSLRGRSV*RSPGGGEEPETGNG
Trigger: GCCATTCCCCGTCTCTGGTTCCTCCCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR GCA 90 bp CCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTCCTGAC +
Preference number: 1 (lower is better)
Translates to: PDFITFILADETPLP*QVQHVLHMAVEPPD
Trigger: GTCAGGAGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR GCA 90 bp AGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATaGAGGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCA +
Preference number: 1 (lower is better)
Translates to: RTGHQSQRKPIDTLP*RVQGDATPPSQPDA
Trigger: TGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 90 bp AGTTCTTCTAGCATGACGTTCTTTGCCAGCATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCAC +
Preference number: 1 (lower is better)
Translates to: SSSSMTFFASISAKA*APTLPMLFPTRLSH
Trigger: GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAGAACGTCATGCTAGAAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR GCA 90 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCTCCTCTAGAGAGAAAGTGTTCCCTC +
Preference number: 1 (lower is better)
Translates to: DEHPPGDFKARVWCP*SRACQPPLERKCSL
Trigger: GAGGGAACACTTTCTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 90 bp TGGGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTaGCTGACGAAACCCCGCTCCCATGCCAGGTCCAGCATGTTCTCC +
Preference number: 1 (lower is better)
Translates to: WDGVKIGNLISSHSY*LTKPRSHARSSMFS
Trigger: GGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR GCA 90 bp CTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTaGTCCATCATAGGTACTGAGGAAGCGAGACTGAGCAGACACCGT +
Preference number: 1 (lower is better)
Translates to: LQDILCVYVLQAERL*SIIGTEEARLSRHR
Trigger: ACGGTGTCTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CCA 90 bp TGTCATCATCACATATTGAAATTAAGGCCCAGAAGGGAAGGGATCTaGGCAGTGTTGCAAAGCAGGGTGGCAGAGGCGAAGCTGGGCCCA +
Preference number: 1 (lower is better)
Translates to: CHHHILKLRPRREGI*AVLQSRVAEAKLGP
Trigger: TGGGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCCTTCCCTTCTGGGCCTTAATTTCAATATGTGATGATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR GCA 90 bp ACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGAGATaGCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGT +
Preference number: 1 (lower is better)
Translates to: TKKTHRHTPMQGPGR*HTTESARRKTFQGS
Trigger: ACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR GCA 90 bp GTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTaGTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCA +
Preference number: 1 (lower is better)
Translates to: VLLSERRLNTTFLLI*CIRNNGLGRTGHQS
Trigger: TGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR TCA 90 bp TCAATGGCAAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCC +
Preference number: 1 (lower is better)
Translates to: SMAKVGLGKVYPGGH*CSLLCQNKGDLWCS
Trigger: GGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTTGCCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR TCA 90 bp TGTAGCCCTTCCCACCCTGGGTGCCAGGGTTGGGGGTGCTGTAAGTaGAATATCAAAGCTGAGGTCACTAATATTCTGAATTTCAGCCTC +
Preference number: 1 (lower is better)
Translates to: CSPSHPGCQGWGCCK*NIKAEVTNILNFSL
Trigger: GAGGCTGAAATTCAGAATATTAGTGACCTCAGCTTTGATATTTCACTTACAGCACCCCCAACCCTGGCACCCAGGGTGGGAAGGGCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR GCA 90 bp AGACGGGGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTaGTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCA +
Preference number: 1 (lower is better)
Translates to: RRGMAWMDESRHGES*FLNYVFCVLLFIRA
Trigger: TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCCCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR GCA 90 bp GATGTAGTTATTCCCCAGCCTCAATGCCAAGAAGTTCTGCCTGCATaGAAGGAGCTTAGCCATGGAGTGTGCACAGCCGTCAGTCAATTT +
Preference number: 1 (lower is better)
Translates to: DVVIPQPQCQEVLPA*KELSHGVCTAVSQF
Trigger: AAATTGACTGACGGCTGTGCACACTCCATGGCTAAGCTCCTTGCATGCAGGCAGAACTTCTTGGCATTGAGGCTGGGGAATAACTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR GCA 90 bp AAAGATGACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTaGTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCC +
Preference number: 1 (lower is better)
Translates to: KDDKLTTQYSAMQMG*CVYSSAKGDSTPPS
Trigger: GGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR TCA 90 bp TGCTTATTAAACGCAGCTAAGCACTATTTTAACACAAGGCCTGCATaGGAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGTAAACCTTCT +
Preference number: 1 (lower is better)
Translates to: CLLNAAKHYFNTRPA*EAARCGEPAISKPS
Trigger: AGAAGGTTTACTTATGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGTGCTTAGCTGCGTTTAATAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 90 bp GAAAGCATAGCACCAGACCCAGCACATAGGCCAGTCAATAAAGTGTaGCTGTCATCATCACATATTGAAATTAAGGCCCAGAAGGGAAGG +
Preference number: 1 (lower is better)
Translates to: ESIAPDPAHRPVNKV*LSSSHIEIKAQKGR
Trigger: CCTTCCCTTCTGGGCCTTAATTTCAATATGTGATGATGACAGCCACACTTTATTGACTGGCCTATGTGCTGGGTCTGGTGCTATGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR CCA 90 bp GAATTTTTCTTCAGTCCTTCTGCGAGAGAACATACACCTTCATCCTaGAGATGGTTCTCCTCCAGGCAGAGTTCTTCTAGCATGACGTTC +
Preference number: 1 (lower is better)
Translates to: EFFFSPSAREHTPSS*RWFSSRQSSSSMTF
Trigger: GAACGTCATGCTAGAAGAACTCTGCCTGGAGGAGAACCATCTCCAGGATGAAGGTGTATGTTCTCTCGCAGAAGGACTGAAGAAAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 90 bp CTCGCAGTGAAGAGCACATTCAATGAGCTTGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAAATAGTTATTTGCTGGTCTCTTCAT +
Preference number: 1 (lower is better)
Translates to: LAVKSTFNELADASV*DIVIAQIVICWSLH
Trigger: ATGAAGAGACCAGCAAATAACTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTTCACTGCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 90 bp ATAGAGCTAACTTCTGCAATTGCTCGCAGTGAAGAGCACATTCAATaGGCTTGCAGATGCCTCGGTCTGAGATATTGTTATCGCGCAAAT +
Preference number: 1 (lower is better)
Translates to: IELTSAIARSEEHIQ*ACRCLGLRYCYRAN
Trigger: ATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCAGAAGTTAGCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 90 bp GTCAATTTGTTGTTGAATAGAGCTAACTTCTGCAATTGCTCGCAGTaGAGAGCACATTCAATGAGCTTGCAGATGCCTCGGTCTGAGATA +
Preference number: 1 (lower is better)
Translates to: VNLLLNRANFCNCSQ*RAHSMSLQMPRSEI
Trigger: TATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCAGAAGTTAGCTCTATTCAACAACAAATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 90 bp AACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGT +
Preference number: 1 (lower is better)
Translates to: NFQSITVHPKAFWHK*NGTASCGSISEVCC
Trigger: ACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp CAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAAGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QGFSQGLGPLVTHSVAPEGLPRQ*CSYSPA
Trigger: GGCTGGGGAATAACTACATCACTGCCGCGGGAGCCC...TTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
3UTR-3UTR TCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAAAGCGGCCCCCACCATTaGCCCTGCCCAGGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGIPEPGTALSPTKTLRESGPHH*PCPGPG
Trigger: CCCAGGACCTGGGCAGGGTCAATGGTGGGGGCCGCT...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp GACCAGCAGCTCGACCAGCTGGCTCCTCTGTGCCTGAAAAGCCTCCTGCGAGCAGCCAAGAGGGTGGGGTaGCCGAGGACAGGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: DQQLDQLAPLCLKSLLRAAKRVG*PRTGEE
Trigger: CTCTTCCCCTGTCCTCGGCCACCCCACCCTCTTGGC...TGCTCGCAGGAGGCTTTTCAGGCACAGAGGAGCCAGCTGGTCGAGCTGCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCAGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 2 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
3UTR-3UTR TCA 90 bp CAGGCCCAAGTACCCTTATTCCAGACGGTGTCCAGAAGGCGCCTGGCCAAGTGGGCCTTCCAGGGACCCTaGGACCAGCAGCTCGACCAG +
Preference number: 2 (lower is better)
Translates to: QAQVPLFQTVSRRRLAKWAFQGP*DQQLDQ
Trigger: CTGGTCGAGCTGCTGGTCTCAGGGTCCCTGGAAGGC...CCACTTGGCCAGGCGCCTTCTGGACACCGTCTGGAATAAGGGTACTTGGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp GGCCTGGGCTTCTTGGGCAGCCGCGATGAGCTTCTGACAGGCCCAAGTACCCTTGGCCACGTGGGAGCCTaGGTCTTACTCGTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: GLGFLGSRDELLTGPSTLGHVGA*VLLVLA
Trigger: TGCCAGGACGAGTAAGACCCAGGCTCCCACGTGGCC...AAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp CAGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGCCCTCGGCCAGCACTTaGGCTCCCGCGGCAGTGATG +
Preference number: 2 (lower is better)
Translates to: QHQCQGLGTHTANVVPHQPSAST*APAAVM
Trigger: CATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGG...CTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
3UTR CAA 90 bp CAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGATGTAGTTATTCCCCAGCCTGAACAG +
Preference number: 2 (lower is better)
Translates to: QELQGGVASEPLGQH*GSRGSDVVIPQPEQ
Trigger: CTGTTCAGGCTGGGGAATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529633.5
3UTR CAA 90 bp CAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGATGTAGTTATTCCCCAGCCTCAATGC +
Preference number: 2 (lower is better)
Translates to: QELQGGVASEPLGQH*GSRGSDVVIPQPQC
Trigger: GCATTGAGGCTGGGGAATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR TCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp CAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QCQGLGTHTANVVPHQAEGLPRQ*CSYSPA
Trigger: GGCTGGGGAATAACTACATCACTGCCGCGGGAGCCC...CTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
3UTR-3UTR GCA 90 bp AGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCACTGCAAGGAGGTGTTaGCTCGGAGCCCCTCGGCCA +
Preference number: 2 (lower is better)
Translates to: SAKAWAPTLPMLFPTRLSTARRC*LGAPRP
Trigger: TGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT...GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
3UTR-3UTR CCA 90 bp GCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGTGTTGCAAAGCAGGGTaGCAGAGGCGAAGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: APTLPMLFPTRLSHLKLWCCKAG*QRRSWA
Trigger: GGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACA...CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR-3UTR GCA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCAGGATCTGGGCAGTGTTaGAAAGCAGGGTGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPGSGQC*KAGWQR
Trigger: CCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCC...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR-3UTR CCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAACTCTGGGCTTGGCCCTaGAGTGGTTCTCAGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PGIPEPGTALSPTKTLRELWAWP*SGSQLW
Trigger: CCACAGCTGAGAACCACTCCAGGGCCAAGCCCAGAG...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp AGAGAGGCTGGCCCAGGAGGTGGAAGCCCTCGTAGTCCTCCCAGGAGAGGACCTAATAAGCTCTGGGCTTaGCCCTGGAGTGGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: REAGPGGGSPRSPPRRGPNKLWA*PWSGSQ
Trigger: CTGAGAACCACTCCAGGGCCAAGCCCAGAGCTTATT...AGGTCCTCTCCTGGGAGGACTACGAGGGCTTCCACCTCCTGGGCCAGCCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR TCA 90 bp GCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGGTGCTCCCCCATACCTaGACAGCAATGCCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: APTLPMLFPTRLSHLKLWVLPHT*TAMPSN
Trigger: GTTACTGGGCATTGCTGTTCAGGTATGGGGGAGCAC...CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR-3UTR TCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGAACCCCCAACCTCAGGTaGTCTGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGTPNLR*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACCTGAGGTTGGGGGT...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR GCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCGGGTCCCAGCAGCCATaGAGCTTGGGGGACTGGCTG +
Preference number: 2 (lower is better)
Translates to: KAANPFAFTVARSSSLLAGSQQP*SLGDWL
Trigger: CAGCCAGTCCCCCAAGCTGCATGGCTGCTGGGACCC...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp AACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATGCCAGGGAGGAGCCAAGAGGGTaGGGTGGCCGAGGACAGGGG +
Preference number: 2 (lower is better)
Translates to: NLISSHSYWLTKPRSHAREEPRG*GGRGQG
Trigger: CCCCTGTCCTCGGCCACCCCACCCTCTTGGCTCCTC...CCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR TCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: KAANPFAFTVARSSSLLATMAGR*LCRSRA
Trigger: AGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGT...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR TCA 90 bp GAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGAGTTATTCCCCAGCCTaGACAGCAATGCCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: ESQELQGGVASEPLGQHLSYSPA*TAMPSN
Trigger: GTTACTGGGCATTGCTGTTCAGGCTGGGGAATAACT...CAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529633.5
3UTR-3UTR CCA 90 bp GGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 2 (lower is better)
Translates to: GSREMPHHRVSQTQNLSRISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...CCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR GCA 90 bp AGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTTGCATGAATCTCTCAGAACGCTaGTGGGGCACAGGGGGCCCT +
Preference number: 2 (lower is better)
Translates to: SETEQTPWSSAWPYTSCMNLSER*WGTGGP
Trigger: AGGGCCCCCTGTGCCCCAGCAGCGTTCTGAGAGATT...CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATCATACCTGCCTGGGCCACGTaGGAGCCTGGGTCTTACTCG +
Preference number: 2 (lower is better)
Translates to: QDILCVYVLQAERLCSIIPAWAT*EPGSYS
Trigger: CGAGTAAGACCCAGGCTCCCACGTGGCCCAGGCAGG...TATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp GGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAACTGCAGGTCTCGGGCTaGGTGGAGCGAGTGGGGGTC +
Preference number: 2 (lower is better)
Translates to: GRCEDRQPDFITFILADELQVSG*VERVGV
Trigger: GACCCCCACTCGCTCCACCCAGCCCGAGACCTGCAG...TTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CAA 90 bp TCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACT +
Preference number: 2 (lower is better)
Translates to: SRRLQSKSLVSLQPS*STSSREKVFPRSQT
Trigger: AGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp AGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTCCTGACAATGGCTGGCCGGCTGAGGGAATGTTCATaGATCAAATATCCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: RSSMFSTWLWSLLTMAGRLRECS*IKYPLG
Trigger: GCCCAGGGGATATTTGATTCATGAACATTCCCTCAG...CCGGCCAGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAACATGCTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR GCA 90 bp AGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTTGCATGGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTC +
Preference number: 2 (lower is better)
Translates to: SETEQTPWSSAWPYTSCMETPLP*QVQHVL
Trigger: GAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC...CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR GCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 2 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR GCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACATTCCCCAGCCTCAATaGCAAGAAGTTCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHIPQPQ*QEVLPA
Trigger: TGCAGGCAGAACTTCTTGGCATTGAGGCTGGGGAAT...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CCA 90 bp ACTGAGGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTAGCCTTCTTGCCCTCTaGGACGGTGTGAAGATCGGC +
Preference number: 2 (lower is better)
Translates to: TEEARLSRHRGPQLGHILSLLAL*DGVKIG
Trigger: GCCGATCTTCACACCGTCCCAGAGGGCAAGAAGGCT...AAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR TCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACGGACAGGGCTCATTTTaGAGAGGCTGCCAACACATG +
Preference number: 2 (lower is better)
Translates to: HFEEAANTCHPASGAQTHGQGSF*RGCQHM
Trigger: CATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCC...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGGGGGTGCTGTAAGTaGAATATCAAAGCTGAGGTC +
Preference number: 2 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHWGCCK*NIKAEV
Trigger: GACCTCAGCTTTGATATTTCACTTACAGCACCCCCA...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAA +
Preference number: 2 (lower is better)
Translates to: PGDFKARVWCPCSRACQPADASV*DIVIAQ
Trigger: TTGCGCGATAACAATATCTCAGACCGAGGCATCTGC...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCT +
Preference number: 2 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNRVWCP*SRACQP
Trigger: AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCT...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR GCA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTTAGCCATGGAGTGTaGACAGCCGTCAGTCAATTT +
Preference number: 2 (lower is better)
Translates to: LGTHTANVVPHQAEPPQALSHGV*TAVSQF
Trigger: AAATTGACTGACGGCTGTGCACACTCCATGGCTAAG...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CCA 90 bp TGCCCTCTGGGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGGTGTGTCTGGCTGCTTaGGAGAGAGGGTGTACCCCC +
Preference number: 2 (lower is better)
Translates to: CPLGRCEDRQPDFITFILVCLAA*ERGCTP
Trigger: GGGGGTACACCCTCTCTCCCAAGCAGCCAGACACAC...CAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCCCAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp TGCCCTCTGGGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGTGTCCAGAAGGCGCCTaGCCAAGTGGGAGAGAGGCT +
Preference number: 2 (lower is better)
Translates to: CPLGRCEDRQPDFITFILCPEGA*PSGREA
Trigger: AGCCTCTCTCCCACTTGGCCAGGCGCCTTCTGGACA...CAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCCCAGAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp TGCAGATGCCTCGGTCTGAGATATTGTTATCGCGCAAATAGTTATTTGCTGGTCCCCTCGGCCAGCACTTaGGCTCCCGCGGCAGTGATG +
Preference number: 2 (lower is better)
Translates to: CRCLGLRYCYRANSYLLVPSAST*APAAVM
Trigger: CATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGG...GACCAGCAAATAACTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGG +
Preference number: 2 (lower is better)
Translates to: PGDFKARVWCPCSRACQPARLPG*CHSFQG
Trigger: CCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGC...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CAA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: CSQKTSSALGRTGLI*KRLPTHVTQPLGPK
Trigger: TTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTAACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: CHTTESARRKTFQGSRILTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp GGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGACCATGTTGGTCAGGTTaGTCTCAAACCCCCAACCTC +
Preference number: 2 (lower is better)
Translates to: GDATPPSQPDAKPFKEVGPCWSG*SQTPNL
Trigger: GAGGTTGGGGGTTTGAGACCAACCTGACCAACATGG...TCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTTGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: QPPLERKCSLGARLPGWCCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp GGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTA +
Preference number: 2 (lower is better)
Translates to: GRCEDRQPDFITFILADEAAMSF*QAQVPL
Trigger: TAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGC...TTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR TCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGAACACAAGGCCTGCATaGGAGGCTGCTCGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLNTRPA*EAARCG
Trigger: TCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTT...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp GGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGGCCTGGCCTCATTGCTaGATGAATTTAAAGATGACA +
Preference number: 2 (lower is better)
Translates to: GSREMPHHRVSQTQNLSRAWPHC*MNLKMT
Trigger: TGTCATCTTTAAATTCATTCAGCAATGAGGCCAGGC...CCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGTGCAATTGCTCGCAGTaGAGAGCACATTCAATGAGC +
Preference number: 2 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMCNCSQ*RAHSMS
Trigger: GCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCA...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR GCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: IFLANLECLGEQTAVTCPRGRSV*RSPGGG
Trigger: CCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCT...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR GCA 90 bp ACTGAGGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTGAGTTCTCCTCCTTGTaGCCACATCTAAGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: TEEARLSRHRGPQLGHILEFSSL*PHLSRG
Trigger: TCCTCTGCTTAGATGTGGGCACAAGGAGGAGAACTC...AAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR GCA 90 bp TGCAGATGCCTCGGTCTGAGATATTGTTATCGCGCAAATAGTTATTTGCTGGTCACTGCAAGGAGGTGTTaGCTCGGAGCCCCTCGGCCA +
Preference number: 2 (lower is better)
Translates to: CRCLGLRYCYRANSYLLVTARRC*LGAPRP
Trigger: TGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT...GACCAGCAAATAACTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATCAGAATCCCAGGAACTaGAAGGAGGTGTTGCCTCGG +
Preference number: 2 (lower is better)
Translates to: GMAWMDESRHGESCFLNYQNPRN*KEVLPR
Trigger: CCGAGGCAACACCTCCTTGCAGTTCCTGGGATTCTG...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR GCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCT +
Preference number: 2 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKRVWCP*SRACQP
Trigger: AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCT...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR GCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCGAAGTTCTGCCTGCATaGAAGGAGCTTAGCCATGGA +
Preference number: 2 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFEVLPA*KELSHG
Trigger: TCCATGGCTAAGCTCCTTGCATGCAGGCAGAACTTC...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTACCAGAGACGGGGAATaGCCTGGATGGATGAGTCGA +
Preference number: 2 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFTRDGE*PGWMSR
Trigger: TCGACTCATCCATCCAGGCCATTCCCCGTCTCTGGT...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp TGCCCTCTGGGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGCCCTGCAGAGGCCACTaGAAGCCAGGATCTAAGGTA +
Preference number: 2 (lower is better)
Translates to: CPLGRCEDRQPDFITFILPCRGH*KPGSKV
Trigger: TACCTTAGATCCTGGCTTCCAGTGGCCTCTGCAGGG...CAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCCCAGAGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR TCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGATTTTACCTTGCTGGGTaGCCACCTGATCCCTTGCTT +
Preference number: 2 (lower is better)
Translates to: LLSERRLNTTFLLICCIRFYLAG*PPDPLL
Trigger: AAGCAAGGGATCAGGTGGTCACCCAGCAAGGTAAAA...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR GCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTAATAGACACACTCCCATaGAGGGTCCAGGGAGATGCC +
Preference number: 2 (lower is better)
Translates to: CHTTESARRKTFQGSRILIDTLP*RVQGDA
Trigger: GGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTAT...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGGGAAAAGTCTATCCTaGAGGGCACTGATGCTCCCT +
Preference number: 2 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAGKSLS*RALMLP
Trigger: AGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAAGACGGGGAATGGCCTaGATGGATGAGTCGAGACAT +
Preference number: 2 (lower is better)
Translates to: EGLSLYILGLNLGKKSMARRGMA*MDESRH
Trigger: ATGTCTCGACTCATCCATCCAGGCCATTCCCCGTCT...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGACCAGAGACGGGGAATaGCCTGGATGGATGAGTCGA +
Preference number: 2 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRTRDGE*PGWMSR
Trigger: TCGACTCATCCATCCAGGCCATTCCCCGTCTCTGGT...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATCATATTCTCCACATGGCTGTaGAGCCTCCTGACAATGGCT +
Preference number: 2 (lower is better)
Translates to: QDILCVYVLQAERLCSIIFSTWL*SLLTMA
Trigger: AGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAA...TATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCAGTCAATAAAGTGTaGCTGTCATCATCACATATT +
Preference number: 2 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPPVNKV*LSSSHI
Trigger: AATATGTGATGATGACAGCCACACTTTATTGACTGG...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR CAA 90 bp AGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAAAA +
Preference number: 2 (lower is better)
Translates to: RISRGQSHTMEEGLS*YILGLNLGKKSMAK
Trigger: TTTTGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACTGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp ATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATGGGAAACTGAGGCAATaGGGTTACTTGTGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: IGNLISSHSYWLTKPRSHGKLRQ*GYLCVW
Trigger: CCAGACACACAAGTAACCTCATTGCCTCAGTTTCCC...ATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR GCA 90 bp ACCTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATGGCCATATACTTCTTaGATGTGGCAGCTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: TSRTFSVYMSSRQSVSAPWPYTS*MWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCA...TGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 2 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATGGGGAATGGCCTGGATaGATGAGTCGAGACATGGGG +
Preference number: 2 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHGEWPG*MSRDMG
Trigger: CCCCATGTCTCGACTCATCCATCCAGGCCATTCCCC...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGTAAACCTTCTCCATCCTTCTGTTGGAACTGCCTCTTGTaGGTCTATTTCAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: EAARCGEPAISKPSPSFCWNCLL*VYFRSL
Trigger: CAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCA...ACAGAAGGATGGAGAAGGTTTACTTATGGCTGGCTCTCCACAGCGAGCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp CTCTGTATCCGTCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAAGGTTACTTGTGTGTCTaGCTGCTTGGGAGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: LCIRPHTVAKVSKRRKLQGYLCV*LLGREG
Trigger: ACCCTCTCTCCCAAGCAGCCAGACACACAAGTAACC...TTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGACGGATACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CCA 90 bp GACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCCCATGTTGGTCAGGTTaGTCTCAAACCCCCAACCTC +
Preference number: 2 (lower is better)
Translates to: DKLTTQYSAMQMGCCVYSPCWSG*SQTPNL
Trigger: GAGGTTGGGGGTTTGAGACCAACCTGACCAACATGG...GGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATCATACACCTTCATCCTaGAGATGGTTCTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GMAWMDESRHGESCFLNYHTPSS*RWFSSR
Trigger: CCTGGAGGAGAACCATCTCCAGGATGAAGGTGTATG...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR TCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 2 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATATAAAAGTCCACATGTaGTCCCAGCTGGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: GMAWMDESRHGESCFLNYIKVHM*SQLECG
Trigger: ACCACACTCCAGCTGGGATCACATGTGGACTTTTAT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCGTCACCCACTCTGTTaGCCCAGAATCCCAGGAACT +
Preference number: 2 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPRHPLC*PRIPGT
Trigger: AGTTCCTGGGATTCTGGGGCAACAGAGTGGGTGACG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CCA 90 bp TGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAACCCGGGAAAAGTCTATCCTaGAGGGCACTGATGCTCCCT +
Preference number: 2 (lower is better)
Translates to: CIRNNGLGRTGHQSQRKPGKSLS*RALMLP
Trigger: AGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCC...GGGTTTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGATCTGTTAAAGACTCCTaGAGCCACTTTGAGGGAATC +
Preference number: 2 (lower is better)
Translates to: LLSERRLNTTFLLICCIRSVKDS*SHFEGI
Trigger: GATTCCCTCAAAGTGGCTCCAGGAGTCTTTAACAGA...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACTGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: GTASCGSISEVCCQSSVHCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGATGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: GMAWMDESRHGESCFLNYAFWHK*NGTASC
Trigger: ACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGC...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR GCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSRGRSV*RSPGGG
Trigger: CCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCT...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACAATAAAGGTGACCTATaGTGTTCCCAGAAAACAAGT +
Preference number: 2 (lower is better)
Translates to: HFEEAANTCHPASGAQTHNKGDL*CSQKTS
Trigger: ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATT...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAGACGGGGAATGGCCTaGATGGATGAGTCGAGACAT +
Preference number: 2 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHRRGMA*MDESRH
Trigger: ATGTCTCGACTCATCCATCCAGGCCATTCCCCGTCT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHFKARV*CPCSRA
Trigger: AGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAA...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCT +
Preference number: 2 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPFKARV*CPCSRA
Trigger: AGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAA...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp AACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGTGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: NPIQCYANGLLCVLLSERCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...CCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRKPRMS*GTNGCH
Trigger: GTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTT...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: DKLTTQYSAMQMGCCVYSKPRMS*GTNGCH
Trigger: GTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTT...GGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAA +
Preference number: 2 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPIPAGV*SYFSCK
Trigger: TTTGCAAGAAAAATATGACCACACTCCAGCTGGGAT...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAACATGTGATCCCAGCTaGAGTGTGGTCATATTTTTC +
Preference number: 2 (lower is better)
Translates to: EGLSLYILGLNLGKKSMATCDPS*SVVIFF
Trigger: GAAAAATATGACCACACTCCAGCTGGGATCACATGT...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAATCAGAAACAATGGTCTaGGCAGAACAGGGCACCAAT +
Preference number: 2 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKSETMV*AEQGTN
Trigger: ATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGA...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CAA 90 bp CAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGG +
Preference number: 2 (lower is better)
Translates to: QMKWNCLLWVYFRSL*SEFSSQASTRSLVR
Trigger: CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 2 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR TCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTATGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: CHTTESARRKTFQGSRILCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACGGGAAAGCTGCTTCCTaGATTATGTGTTCTGTGTAC +
Preference number: 2 (lower is better)
Translates to: GTASCGSISEVCCQSSVHGKAAS*IMCSVY
Trigger: GTACACAGAACACATAATTCAGGAAGCAGCTTTCCC...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAA +
Preference number: 2 (lower is better)
Translates to: GMAWMDESRHGESCFLNYIPAGV*SYFSCK
Trigger: TTTGCAAGAAAAATATGACCACACTCCAGCTGGGAT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAATCTGTTAAAGACTCCTaGAGCCACTTTGAGGGAATC +
Preference number: 2 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKSVKDS*SHFEGI
Trigger: GATTCCCTCAAAGTGGCTCCAGGAGTCTTTAACAGA...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR TCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHAFWHK*NGTASC
Trigger: ACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGC...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR GCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTACAAATGAAATGGAACTaGCTCTTGTGGGTCTATTTC +
Preference number: 2 (lower is better)
Translates to: CHTTESARRKTFQGSRILQMKWN*LLWVYF
Trigger: GAAATAGACCCACAAGAGGCAGTTCCATTTCATTTG...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGG +
Preference number: 2 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFARLPG*CHSFQG
Trigger: CCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGC...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGACATGTGATCCCAGCTaGAGTGTGGTCATATTTTTC +
Preference number: 2 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVTCDPS*SVVIFF
Trigger: GAAAAATATGACCACACTCCAGCTGGGATCACATGT...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAATAAAGGTGACCTATaGTGTTCCCAGAAAACAAGT +
Preference number: 2 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPNKGDL*CSQKTS
Trigger: ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATT...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGAATAAAGGTGACCTATaGTGTTCCCAGAAAACAAGT +
Preference number: 2 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVNKGDL*CSQKTS
Trigger: ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATT...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAA +
Preference number: 2 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKIPAGV*SYFSCK
Trigger: TTTGCAAGAAAAATATGACCACACTCCAGCTGGGAT...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp CTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCCGCGGGATCTGGGCAGTGTaGCAAAGCAGGGTGGCAGAG +
Preference number: 3 (lower is better)
Translates to: LQPGPGPPRHPLCCPRIRGIWAV*QSRVAE
Trigger: CTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCC...GCGGATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR TCA 72 bp ACATGGCTGTGGAGCCTCCTGACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCTGGGTGGAGCGAGTGG +
Preference number: 3 (lower is better)
Translates to: TWLWSLLTMAGR*LCRSRAGWSEW
Trigger: CCACTCGCTCCACCCAGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCCATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CCA 72 bp GGGCAGTGTTGCAAAGCAGGGTGGCAGAGGCGAAGCTaGGCCCAGACTTCTAGAGCCCAGCTCGGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: GQCCKAGWQRRS*AQTSRAQLGAP
Trigger: GGGAGCACCGAGCTGGGCTCTAGAAGTCTGGGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACACTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR-3UTR CAA 90 bp CTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCCGCCTCCCACACTTAGCCTaGATGGTGCTCCCCCATACC +
Preference number: 3 (lower is better)
Translates to: LQPGPGPPRHPLCCPRIRLPHLA*MVLPHT
Trigger: GGTATGGGGGAGCACCATCAAGGCTAAGTGTGGGAG...GCGGATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR TCA 72 bp CCAGTCCAGGACACTCTCGAAGCCTTCCAGGGACCCTaGGACCAGCAGCTCGACCAGCTGGCTCCTCTGTGC +
Preference number: 3 (lower is better)
Translates to: PVQDTLEAFQGP*DQQLDQLAPLC
Trigger: GCACAGAGGAGCCAGCTGGTCGAGCTGCTGGTCTCAGGGTCCCTGGAAGGCTTCGAGAGTGTCCTGGACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CCA 72 bp GTTCTCCACATGGCTGTGGAGCCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTCTCGGGCTGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: VLHMAVEPPDNG*PVTLQVSGWVE
Trigger: CTCCACCCAGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 72 bp GGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGACTCTGCAGGTCTCGGG +
Preference number: 3 (lower is better)
Translates to: GPACSPHGCGAS*QWLAGDSAGLG
Trigger: CCCGAGACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAACATGCTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 72 bp TCGGCCTGGGCTTCTTGGGCAGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTATTCCAGACGGTGTCC +
Preference number: 3 (lower is better)
Translates to: SAWASWAAAMSF*QAQVPLFQTVS
Trigger: GGACACCGTCTGGAATAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 72 bp GGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCCTCAATGCCAAGAAGT +
Preference number: 3 (lower is better)
Translates to: GAPRPALGLPRQ*CSYSPASMPRS
Trigger: ACTTCTTGGCATTGAGGCTGGGGAATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR CCA 72 bp GAAGGGAAGGGATCTGGGCAGTGTTGCAAAGCAGGGTaGCAGAGGCGAAGCTGGGCCCAGACTTCTAGAGCC +
Preference number: 3 (lower is better)
Translates to: EGKGSGQCCKAG*QRRSWAQTSRA
Trigger: GGCTCTAGAAGTCTGGGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCCTTCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR TCA 72 bp AGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGGAGGATCAGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: RHSVNKHIHGPH*PTRKPGRISRG
Trigger: GCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR TCA 72 bp ACTGGCTGTCGGCCTGGGCTTCTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAGTACCCTTATTCCAGA +
Preference number: 3 (lower is better)
Translates to: TGCRPGLLGQPR*ASDRPKYPYSR
Trigger: TCTGGAATAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CAA 90 bp ACTGAGGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTGTCGGCCTGGGCTTCTaGGGCAGCCGCGATGAGCTT +
Preference number: 3 (lower is better)
Translates to: TEEARLSRHRGPQLGHILVGLGF*GSRDEL
Trigger: AAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGAC...AAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CAA 90 bp ATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATCAGCAGCCATGCAGCTaGGGGGACTGGCTGTCGGCC +
Preference number: 3 (lower is better)
Translates to: IGNLISSHSYWLTKPRSHQQPCS*GDWLSA
Trigger: GGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCTG...ATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CAA 90 bp CAGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGTCGTCACCCACTCTGTaGCCCCAGAATCTGAACAGC +
Preference number: 3 (lower is better)
Translates to: QHQCQGLGTHTANVVPHQSSPTL*PQNLNS
Trigger: GCTGTTCAGATTCTGGGGCAACAGAGTGGGTGACGA...CTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524712.5
3UTR-3UTR CAA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGTCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAG +
Preference number: 3 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRSLQPS*STSSRE
Trigger: CTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGA...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR TCA 72 bp CCTCCAGGCAGAGCGTCTCTGCTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAGACACCGTGGTCCTCA +
Preference number: 3 (lower is better)
Translates to: PPGRASLLHHRY*GSETEQTPWSS
Trigger: TGAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CAA 90 bp AACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAACTGCAAGGAGGTGTaGCCTCGGAGCCCCTCGGCC +
Preference number: 3 (lower is better)
Translates to: NPIQCYANGLLCVLLSERNCKEV*PRSPSA
Trigger: GGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTT...CCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR GCA 72 bp ACCCATAGACACACTCCCATGCAGGGTCCAGGGAGATaGCACACCACCGAGTCAGCCAGACGCAAAACCTTT +
Preference number: 3 (lower is better)
Translates to: THRHTPMQGPGR*HTTESARRKTF
Trigger: AAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp AGCATGACGTTCTTTGCCAGCATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATGTTGTTCCCCACCAGG +
Preference number: 3 (lower is better)
Translates to: SMTFFASISAKA*APTLPMLFPTR
Trigger: CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAGAACGTCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
3UTR GCA 72 bp ATCACATTCATACTGGCTGACGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTCCACATGGCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: ITFILADETPLP*QVQHVLHMAVE
Trigger: CTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR GCA 72 bp CCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCTCCTCTAGAGAGAAAG +
Preference number: 3 (lower is better)
Translates to: PPGDFKARVWCP*SRACQPPLERK
Trigger: CTTTCTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp GTAGAAGGAAGGCAGCCAATCCATTCGCTTTCACCGTaGCAAGATCAAGCAGCCTTCTTGCCCTCTGGGACG +
Preference number: 3 (lower is better)
Translates to: VEGRQPIHSLSP*QDQAAFLPSGT
Trigger: CGTCCCAGAGGGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTTCCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CCA 72 bp GAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGGCCTGCAGGAGGGCTT +
Preference number: 3 (lower is better)
Translates to: ERKCSLGARLPG*CHSFQGPAGGL
Trigger: AAGCCCTCCTGCAGGCCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCTTGTCAACCTCCTCTA +
Preference number: 3 (lower is better)
Translates to: DEHPPGDFKARV*CPCSRACQPPL
Trigger: TAGAGGAGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR GCA 72 bp CACCAATCACAAAGAAAACCCATAGACACACTCCCATaGAGGGTCCAGGGAGATGCCACACCACCGAGTCAG +
Preference number: 3 (lower is better)
Translates to: HQSQRKPIDTLP*RVQGDATPPSQ
Trigger: CTGACTCGGTGGTGTGGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp GTGAAGATCGGCAACCTGATTTCATCACATTCATACTaGCTGACGAAACCCCGCTCCCATGCCAGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: VKIGNLISSHSY*LTKPRSHARSS
Trigger: GCTGGACCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CCA 72 bp GGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATGTGGCAGCTTCCAAAG +
Preference number: 3 (lower is better)
Translates to: GSETEQTPWSSA*PYTSCMWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR TCA 72 bp CTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTaGGACGAACATCCTCCCGGAGACTTCAAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: LGPKLTACSQTN*DEHPPGDFKAR
Trigger: TCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp CACATATTGAAATTAAGGCCCAGAAGGGAAGGGATCTaGGCAGTGTTGCAAAGCAGGGTGGCAGAGGCGAAG +
Preference number: 3 (lower is better)
Translates to: HILKLRPRREGI*AVLQSRVAEAK
Trigger: CTTCGCCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCCTTCCCTTCTGGGCCTTAATTTCAATATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR-3UTR CAA 90 bp ACTATTTTAACACAAGGCCTGCATGAGAGGCTGCTCGCTGTGGAGAGCCAGCCAAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 3 (lower is better)
Translates to: TILTQGLHERLLAVESQPRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...TGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CAA 90 bp ACTGAGGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTAAGGAGTTCTCCTCCTaGTGCCCACATCTAAGCAGA +
Preference number: 3 (lower is better)
Translates to: TEEARLSRHRGPQLGHILKEFSS*CPHLSR
Trigger: TCTGCTTAGATGTGGGCACAAGGAGGAGAACTCCTT...AAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR-3UTR CAA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGAT +
Preference number: 3 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSPLGQH*GSRGSD
Trigger: ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGG...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CAA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGACAGGGTTTCTCCATGTaGGTCAGGTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGQGFSM*VRLVSN
Trigger: GTTTGAGACCAACCTGACCAACATGGAGAAACCCTG...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CAA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGCACATTCAATGAGCTaGCAGATGCCTCGGTCTGAG +
Preference number: 3 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWAHSMS*QMPRSE
Trigger: CTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 72 bp AACGCAGCTAAGCACTATTTTAACACAAGGCCTGCATaGGAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGT +
Preference number: 3 (lower is better)
Translates to: NAAKHYFNTRPA*EAARCGEPAIS
Trigger: ACTTATGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGTGCTTAGCTGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR TCA 72 bp CAAGGGCCTGCAGGAGGGCTTCTGCCCCTAGGTAGGTaGTGCAGTTATTGGACAACTTCAGGATTTTCAAAC +
Preference number: 3 (lower is better)
Translates to: QGPAGGLLPLGR*CSYWTTSGFSN
Trigger: GTTTGAAAATCCTGAAGTTGTCCAATAACTGCATCACCTACCTAGGGGCAGAAGCCCTCCTGCAGGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR GCA 72 bp ATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTaGTCCATCATAGGTACTGAGGAAGCGAGACTGAGC +
Preference number: 3 (lower is better)
Translates to: ILCVYVLQAERL*SIIGTEEARLS
Trigger: GCTCAGTCTCGCTTCCTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR GCA 72 bp AGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTaGTGTATCAGAAACAATGGTCTGGGCAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: SERRLNTTFLLI*CIRNNGLGRTG
Trigger: CCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CAA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 3 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLEEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp TTCAGTCCTTCTGCGAGAGAACATACACCTTCATCCTaGAGATGGTTCTCCTCCAGGCAGAGTTCTTCTAGC +
Preference number: 3 (lower is better)
Translates to: FSPSAREHTPSS*RWFSSRQSSSS
Trigger: GCTAGAAGAACTCTGCCTGGAGGAGAACCATCTCCAGGATGAAGGTGTATGTTCTCTCGCAGAAGGACTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR-3UTR CAA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 3 (lower is better)
Translates to: EFSSQASTRSLVRPFEILRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCATTGTACATCCTGGGATaGAATCTTGGGAAGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPLYILG*NLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAA...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 3 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSEEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR GCA 72 bp ATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTaGTTCCTGAATTATGTGTTCTGTGTACTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: MAWMDESRHGES*FLNYVFCVLLF
Trigger: GAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGATGGCAAAAGTAGGCTaGGGAAAAGTCTATCCTGGA +
Preference number: 3 (lower is better)
Translates to: CSQKTSSALGRTGLILKRMAKVG*GKVYPG
Trigger: TCCAGGATAGACTTTTCCCAAGCCTACTTTTGCCAT...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAG +
Preference number: 3 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPYFRSL*SEFSSQ
Trigger: CTGTGAACTGAACTCTGACAACAGACTTCTGAAATA...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CAA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAGAAGCCAAAAGTGTTTaGATTGCCTGGCTATTTTCT +
Preference number: 3 (lower is better)
Translates to: LLSERRLNTTFLLICCIREAKSV*IAWLFS
Trigger: AGAAAATAGCCAGGCAATCAAAACACTTTTGGCTTC...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CAA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTCCGTCAGTCAATTTGTaGTTGAATAGAGCTAACTTC +
Preference number: 3 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPPSVNL*LNRANF
Trigger: GAAGTTAGCTCTATTCAACAACAAATTGACTGACGG...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 72 bp GGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTaGATTATGTGTTCTGTGTACTCCTCTTCATCAGAG +
Preference number: 3 (lower is better)
Translates to: GWMSRDMGKAAS*IMCSVYSSSSE
Trigger: CTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR GCA 72 bp AAACTGACAACCCAATACAGTGCTATGCAAATGGGCTaGTGTGTGTACTCCTCAGCGAAAGGAGACTCAACA +
Preference number: 3 (lower is better)
Translates to: KLTTQYSAMQMG*CVYSSAKGDST
Trigger: TGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CCA 72 bp GCACCAGACCCAGCACATAGGCCAGTCAATAAAGTGTaGCTGTCATCATCACATATTGAAATTAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: APDPAHRPVNKV*LSSSHIEIKAQ
Trigger: CTGGGCCTTAATTTCAATATGTGATGATGACAGCCACACTTTATTGACTGGCCTATGTGCTGGGTCTGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
3UTR-3UTR CAA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 3 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAG +
Preference number: 3 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFYFRSL*SEFSSQ
Trigger: CTGTGAACTGAACTCTGACAACAGACTTCTGAAATA...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGATCAGTCAATTTGTTGTaGAATAGAGCTAACTTCTGC +
Preference number: 3 (lower is better)
Translates to: LLSERRLNTTFLLICCIRSVNLL*NRANFC
Trigger: GCAGAAGTTAGCTCTATTCAACAACAAATTGACTGA...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR TCA 72 bp TTGTTGAATAGAGCTAACTTCTGCAATTGCTCGCAGTaGAGAGCACATTCAATGAGCTTGCAGATGCCTCGG +
Preference number: 3 (lower is better)
Translates to: LLNRANFCNCSQ*RAHSMSLQMPR
Trigger: CCGAGGCATCTGCAAGCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCAGAAGTTAGCTCTATTCAACAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR CCA 72 bp GTGTGGTCATATTTTTCTTGCAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCACGTGTCCCCTTCCAAA +
Preference number: 3 (lower is better)
Translates to: VWSYFSCKPRMS*GTNGCHVSPSK
Trigger: TTTGGAAGGGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGACCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCAAATGGAACTGCCTCTaGTGGGTCTATTTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: IFLANLECLGEQTAVTCPKWNCL*WVYFRS
Trigger: ACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTT...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAACCATGCCTGGCCTCATaGCTGAATGAATTTAAAGAT +
Preference number: 3 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKPCLAS*LNEFKD
Trigger: ATCTTTAAATTCATTCAGCAATGAGGCCAGGCATGG...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR-3UTR CAA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTTTGTACATCCTGGGATaGAATCTTGGGAAGAAGTCA +
Preference number: 3 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPLYILG*NLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAA...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATTTGTACATCCTGGGATaGAATCTTGGGAAGAAGTCA +
Preference number: 3 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHLYILG*NLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAA...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR TCA 72 bp AAGAGCACATTCAATGAGCTTGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAAATAGTTATTTGCTGG +
Preference number: 3 (lower is better)
Translates to: KSTFNELADASV*DIVIAQIVICW
Trigger: CCAGCAAATAACTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR CCA 72 bp AGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTaGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGT +
Preference number: 3 (lower is better)
Translates to: SILAQMKWNCLL*VYFRSLLSEFS
Trigger: ACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 3 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKEEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGAAATGGAACTGCCTCTaGTGGGTCTATTTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKKWNCL*WVYFRS
Trigger: ACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTT...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR CCA 72 bp GGAAATAAAAGTCCACATGTGATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAACCTAGAATGTCTTGG +
Preference number: 3 (lower is better)
Translates to: GNKSPHVIPAGV*SYFSCKPRMSW
Trigger: CCAAGACATTCTAGGTTTGCAAGAAAAATATGACCACACTCCAGCTGGGATCACATGTGGACTTTTATTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR-3UTR CAA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 3 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR TCA 72 bp TCCATAACTGTACATCCTAAAGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGTGGGTCTATTTCAGAA +
Preference number: 3 (lower is better)
Translates to: SITVHPKAFWHK*NGTASCGSISE
Trigger: TTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGGCCGCTGCAGGAGCGTaGTCTTGCCACTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: TARRCCLGAPRPALGLPRAAAGA*SCHCPP
Trigger: AGGCGGGCAGTGGCAAGAGCACGCTCCTGCAGCGGC...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp CACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HPRLQPGPGPPRHPLCCPTGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...GGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp TGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCACCAGGTGCAGGAGGGTaGGGAGGCGGCCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: CKEVLPRSPSASTWAPAAPGAGG*GGGPEE
Trigger: TTCTTCGGGGCCGCCTCCCCACCCTCCTGCACCTGG...TGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCCCTCGGCCAGCACTTaGGCTCCCGCGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: TARRCCLGAPRPALGLPRPSAST*APAAVM
Trigger: CATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGG...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ELQGGVASEPLGQHLGSRGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...GCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRLQPGPGPPRHPLCCPRGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...TCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp CCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: PRLQPGPGPPRHPLCCPRGCGAS*QWLAGD
Trigger: GTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCC...TCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTAACCCCCAACCTCAGGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GVASEPLGQHLGSRGSDVTPNLR*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACCTGAGGTTGGGGGT...TACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp CCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAGCGTGCTCTTGCCACTaGCCGCCTCACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PRLQPGPGPPRHPLCCPRACSCH*PPHPPP
Trigger: TGGTGGTGGGTGAGGCGGGCAGTGGCAAGAGCACGC...TCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp ACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCACCTCCGAGGCCTGGATaGACATCGTGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TQGFSQGLGPLVTHSVAPPPRPG*TSWAGA
Trigger: GGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGG...TGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp TCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCAGTGCTTGCGGAGGCTaGGGGCCAGACACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SQELQGGVASEPLGQHLGSACGG*GPDTSG
Trigger: CCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACT...GCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGGCCAGCCGCTCCTCCTaGATCTCGTACAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GTARRCCLGAPRPALGLPASRSS*ISYRLR
Trigger: CCGGAGCCTGTACGAGATGCAGGAGGAGCGGCTGGC...CGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCTCGGTCGGGGAGCAGTaGCGTTCACGATCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LQGGVASEPLGQHLGSRGSVGEQ*RSRSVN
Trigger: GTTCACGGATCGTGAACGCCACTGCTCCCCGACCGA...GCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp CACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HPRLQPGPGPPRHPLCCPCSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...GGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: TARRCCLGAPRPALGLPRRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR CCA 90 bp GGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCCGCCAGGGTGGTTGTAGAGGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: GPLVTHSVAPESARVVVEASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...CTCTACAACCACCCTGGCGGATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR TCA 90 bp ACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGTGCTTGGAGCAGGCGGATaGGGCGGTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: THTANVVPHQAEPPQALVLGAGG*GGPPPR
Trigger: CCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAG...CACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTATATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVASEPLGQHLGSRGSDVYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...TACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GAAACCCCGCTCCCATGCCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTAGCGGCCCCCACCATTaGCCCTGCCCAGGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ETPLPCQVQHVLHMAVEPSGPHH*PCPGPG
Trigger: CCCAGGACCTGGGCAGGGTCAATGGTGGGGGCCGCT...AGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CACCAGGCTGAGCCACCTCAAGCTCTGGTGATCACCCAAGGCTTCAGCCAGGGCGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HQAEPPQALVITQGFSQGGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTGGCTCAGCCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: TARRCCLGAPRPALGLPRLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp AGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCCGCCAGGGTGGCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: RAWAPSSPTLLPQNPPGWLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...CCACCCTGGCGGATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR CCA 90 bp GGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGCATCGTCATTGAGGTaGCCAGGGGTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GGVASEPLGQHLGSRGSDASSLR*PGVLKS
Trigger: GCTCTTCAGCACCCCTGGCCACCTCAATGACGATGC...ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGAAATGTCATCAGGGCTaGCCTGTGCTGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TARRCCLGAPRPALGLPRKCHQG*PVLPGA
Trigger: AGCTCCAGGCAGCACAGGTCAGCCCTGATGACATTT...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp ACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCACACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TQGFSQGLGPLVTHSVAPHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...TGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCCAGGCAGAGCGTCTCTaGTCCATCATAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LQGGVASEPLGQHLGSRGQAERL*SIIGTE
Trigger: CTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTG...GCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp AAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATTGCGGCTCGGCCTTCTaGAGCAAAGCTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: KASARAWAPSSPTLLPQNCGSAF*SKAATL
Trigger: CAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCA...ATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASVPRLGHPHCQCCSPPGTGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...GCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp TCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCCCTGGATGCACATCGTaGGCAGGAGCCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: SQELQGGVASEPLGQHLGPGCTS*AGAWPL
Trigger: CAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGG...GCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCCCCTCGGCCAGCACTTaGGCTCCCGCGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: ASVPRLGHPHCQCCSPPGPSAST*APAAVM
Trigger: CATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGG...GCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR CCA 90 bp CAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: QGLGTHTANVVPHQAEPPASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...AGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp GCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: ASVPRLGHPHCQCCSPPGASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...GCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp GACCAGCAGCTCGACCAGCTGGCTCCTCTGTGCCTGAAAAGCCTCCTGCGAGCACCTGCCTGGGCCACGTaGGAGCCTGGGTCTTACTCG +
Preference number: 4 (lower is better)
Translates to: DQQLDQLAPLCLKSLLRAPAWAT*EPGSYS
Trigger: CGAGTAAGACCCAGGCTCCCACGTGGCCCAGGCAGG...TGCTCGCAGGAGGCTTTTCAGGCACAGAGGAGCCAGCTGGTCGAGCTGCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
3UTR CAA 72 bp CAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGATGTAGTTATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: QGGVASEPLGQH*GSRGSDVVIPQ
Trigger: CTGGGGAATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATTCAGGCCAACAGCAGTaGTCAAAGAGTAGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: GGVASEPLGQHLGSRGSDSGQQQ*SKSRVR
Trigger: GCGGACTCTACTCTTTGAGCACTGCTGTTGGCCTGA...ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp TCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCGGCTGGTCACCACCTTaGGGGCATTCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQELQGGVASEPLGQHLGGWSPP*GHSSAG
Trigger: ACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCC...GCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGTHTANVVPHQAEPPQATGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCTGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CACCAGGCTGAGCCACCTCAAGCTCTGGTGATCACCCAAGGCTTCAGCCAGGGCACTGCAAGGAGGTGTTaGCTCGGAGCCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: HQAEPPQALVITQGFSQGTARRC*LGAPRP
Trigger: TGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT...GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTGGCTCAGCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR CCA 90 bp ATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGGACTGGCTGTCGGCCTaGGCTTCTTGGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ISAKAWAPTLPMLFPTRLDWLSA*ASWAAA
Trigger: CGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTC...CAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACGACTGGCTGTCGGCCTaGGCTTCTTGGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHDWLSA*ASWAAA
Trigger: CGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTC...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGCTGCAGGTCTCGGGCTaGGTGGAGCGAGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSREMPHHRVSQTQNLSRLQVSG*VERVGV
Trigger: GACCCCCACTCGCTCCACCCAGCCCGAGACCTGCAG...CCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCTGACCTGTGCTGCCTaGAGCTGCTGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KASARAWAPSSPTLLPQNLTCAA*SCWAEN
Trigger: GTTCTCAGCCCAGCAGCTCCAGGCAGCACAGGTCAG...ATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCAGCGGGCACAGGCCTaGCGCCGGAGCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDQRAQA*RRSRAF
Trigger: GAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTG...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: PRLQPGPGPPRHPLCCPRISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...TCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp AAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KAWAPTLPMLFPTRLSHLGLPRQ*CSYSPA
Trigger: GGCTGGGGAATAACTACATCACTGCCGCGGGAGCCC...GAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR TCA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGTTTTACCTTGCTGGGTaGCCACCTGATCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: TARRCCLGAPRPALGLPRFYLAG*PPDPLL
Trigger: AAGCAAGGGATCAGGTGGTCACCCAGCAAGGTAAAA...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACCCCACAGAGCCAGTCTaGCCAGGTGCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHPTEPV*PGAGGW
Trigger: CCACCCTCCTGCACCTGGGCAGACTGGCTCTGTGGG...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTCCTCCGAGGCCTGGATaGACATCGTGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCPPRPG*TSWAGA
Trigger: GGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGG...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGGCCAGCAGGCCCCAGTaGTCCCGGGACAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRASRPQ*SRDNSP
Trigger: AGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGC...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCACGTCACCCACTCTGTTaGCCCAGAATTACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TQGFSQGLGPLVTHSVAPRHPLC*PRITEP
Trigger: AGGCTCTGTAATTCTGGGGCAACAGAGTGGGTGACG...TGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527052.5
CDS-3UTR GCA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCGTCACCCACTCTGTTaGCCCAGAATCCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHRHPLC*PRIRQG
Trigger: ACCCTGGCGGATTCTGGGGCAACAGAGTGGGTGACG...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR CCA 90 bp GAAACCCCGCTCCCATGCCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTAGCAGCCATGCAGCTTaGGGGACTGGCTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ETPLPCQVQHVLHMAVEPSSHAA*GTGCRP
Trigger: AGGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCT...AGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTATTCTCCACATGGCTGTaGAGCCTCCTGACAATGGCT +
Preference number: 4 (lower is better)
Translates to: GVASEPLGQHLGSRGSDVFSTWL*SLLTMA
Trigger: AGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAA...TACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCTATACTTCTTGCATGTaGCAGCTTCCAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQGGVASEPLGQHLGSRGYTSCM*QLPKAG
Trigger: CCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATA...GCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTATCTGAGCAAAGCTGGTaGCACATCAGCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: GVASEPLGQHLGSRGSDVSEQSW*HISTEC
Trigger: GCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGA...TACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGACCCTCGGCCAGCACTTaGGCTCCCGCGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGPSAST*APAAVM
Trigger: CATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGG...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAAATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: QGFSQGLGPLVTHSVAPEISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...TTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp TCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SQELQGGVASEPLGQHLGASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...GCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CAGCTGTGGAAACACCAGCCAAGGATGCGACAGCGGCCCCCACCATTGACCCTGGTGTGTCTGGCTGCTTaGGAGAGAGGGTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: QLWKHQPRMRQRPPPLTLVCLAA*ERGCTP
Trigger: GGGGGTACACCCTCTCTCCCAAGCAGCCAGACACAC...CAGGGTCAATGGTGGGGGCCGCTGTCGCATCCTTGGCTGGTGTTTCCACAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGGCGAS*QWLAGD
Trigger: GTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCC...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AGAGAGGCTGGCCCAGGAGGTGGAAGCCCTCGTAGTCCTCCCAGGAGAGGACCTCACATTCATACTGGCTaGCGAAACCCCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: REAGPGGGSPRSPPRRGPHIHTG*RNPAPM
Trigger: CATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTG...AGGTCCTCTCCTGGGAGGACTACGAGGGCTTCCACCTCCTGGGCCAGCCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATTGGAAGATGTCTTCTTaGCCAACATCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: GGVASEPLGQHLGSRGSDWKMSS*PTSGQQ
Trigger: CTGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCA...ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: ASVPRLGHPHCQCCSPPGCSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...GCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp AGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SAKAWAPTLPMLFPTRLSCSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGAGTTATTCCCCAGCCTaGACAGCAATGCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: GTARRCCLGAPRPALGLPSYSPA*TAMPSN
Trigger: GTTACTGGGCATTGCTGTTCAGGCTGGGGAATAACT...CGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529633.5
CDS-3UTR GCA 90 bp GGCCTGGGCTTCTTGGGCAGCCGCGATGAGCTTCTGACAGGCCCAAGTACCCTTCAGCTGGCTCCTCTGTaGCTGAAAAGCCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: GLGFLGSRDELLTGPSTLQLAPL*LKSLLR
Trigger: TCGCAGGAGGCTTTTCAGGCACAGAGGAGCCAGCTG...AAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAGCGTGCTCTTGCCACTaGCCGCCTCACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGACSCH*PPHPPP
Trigger: TGGTGGTGGGTGAGGCGGGCAGTGGCAAGAGCACGC...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCCAGCAGGCCCCAGTaGTCCCGGGACAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDASRPQ*SRDNSP
Trigger: AGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTGCCAGCCGCTCCTCCTaGATCTCGTACAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGDFKARVWCPCSRACQPASRSS*ISYRLR
Trigger: CCGGAGCCTGTACGAGATGCAGGAGGAGCGGCTGGC...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCAAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GCCCAGCTCGGTGCTCCCACACTTAGCCTTGATGGTGCTCCCCCATACCTGAACAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: AQLGAPTLSLDGAPPYLNRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...GTTCAGGTATGGGGGAGCACCATCAAGGCTAAGTGTGGGAGCACCGAGCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR GCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACACTGCAAGGAGGTGTTaGCTCGGAGCCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHTARRC*LGAPRP
Trigger: TGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTAGTTATTCAGAATCCCAGGAACTaGAAGGAGGTGTTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASEPLGQHLGSRGSDVVIQNPRN*KEVLPR
Trigger: CCGAGGCAACACCTCCTTGCAGTTCCTGGGATTCTG...AATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CAGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCCTGCATGAGAGGCTaGTCGCTGTGGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QHQCQGLGTHTANVVPHQACMRG*SLWRAS
Trigger: GCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGC...CTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp ACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAAAACCTACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TQGFSQGLGPLVTHSVAPKPTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGGTTT...TGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GAAACCCCGCTCCCATGCCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTTGTCCAGAAGGCGCCTaGCCAAGTGGGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ETPLPCQVQHVLHMAVEPCPEGA*PSGREA
Trigger: AGCCTCTCTCCCACTTGGCCAGGCGCCTTCTGGACA...AGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGTGTCCAGAAGGCGCCTaGCCAAGTGGGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GTHTANVVPHQAEPPQALCPEGA*PSGREA
Trigger: AGCCTCTCTCCCACTTGGCCAGGCGCCTTCTGGACA...CAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTAGGGCTGAGGTCTCTTaGAGCAGGCGGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCRAEVS*SRRMRR
Trigger: CCGCCTCATCCGCCTGCTCCAAGAGACCTCAGCCCT...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACACAGCGGGCACAGGCCTaGCGCCGGAGCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTQRAQA*RRSRAF
Trigger: GAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTG...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCCATACACCTTCATCCTaGAGATGGTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELQGGVASEPLGQHLGSRHTPSS*RWFSSR
Trigger: CCTGGAGGAGAACCATCTCCAGGATGAAGGTGTATG...GCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QCQGLGTHTANVVPHQAETHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...CTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CACCAGGCTGAGCCACCTCAAGCTCTGGTGATCACCCAAGGCTTCAGCCAGGGCGGGGAATGGCCTGGATaGATGAGTCGAGACATGGGG +
Preference number: 4 (lower is better)
Translates to: HQAEPPQALVITQGFSQGGEWPG*MSRDMG
Trigger: CCCCATGTCTCGACTCATCCATCCAGGCCATTCCCC...GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTGGCTCAGCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CCCCCTCGTCACCCACTCTGTTGCCCCAGAATCCGCCAGGGTGGTTGTAGAGATTGTTGCAAAGCAGGGTaGCAGAGGCGAAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PPRHPLCCPRIRQGGCRDCCKAG*QRRSWA
Trigger: GGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACA...ATCTCTACAACCACCCTGGCGGATTCTGGGGCAACAGAGTGGGTGACGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR TCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCCTTCCAGGGACCCTaGGACCAGCAGCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDAFQGP*DQQLDQ
Trigger: CTGGTCGAGCTGCTGGTCTCAGGGTCCCTGGAAGGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGACTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGLGQPR*ASDRPK
Trigger: CTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAG...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAACTGAGGAAGCGAGACTaGGCAGACACCGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGIPEPGTALSPTKTLRELRKRD*ADTVVL
Trigger: GAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAG...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp CCAGAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACCTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PESQELQGGVASEPLGQHLHHRY*GSETEQ
Trigger: CTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAG...GTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCCACCCCGGGCTCATaGTGGCGCTTCCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDATPGS*WRFLRY
Trigger: GTACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCTTGGAGCAGGCGGATaGGGCGGTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGLGAGG*GGPPPR
Trigger: CCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAG...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTAAGGCTGCTGTGATCTaGAGGTTGTGCGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LGTHTANVVPHQAEPPQAKAAVI*RLCGSA
Trigger: GGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTT...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp AGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SISAKAWAPTLPMLFPTRCSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp CATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: HQCQGLGTHTANVVPHQACSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...AGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGGTCCCAGCAGCCATaGAGCTTGGGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMGSQQP*SLGDWL
Trigger: CAGCCAGTCCCCCAAGCTGCATGGCTGCTGGGACCC...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACGGGTCCCAGCAGCCATaGAGCTTGGGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHGSQQP*SLGDWL
Trigger: CAGCCAGTCCCCCAAGCTGCATGGCTGCTGGGACCC...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCAGCCCACAGCAAGTaGAGCCGCTGCAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDAAHSK*SRCRSV
Trigger: CACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACGCAGCCCACAGCAAGTaGAGCCGCTGCAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHAAHSK*SRCRSV
Trigger: CACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGC...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACCCCACAGAGCCAGTCTaGCCAGGTGCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHPTEPV*PGAGGW
Trigger: CCACCCTCCTGCACCTGGGCAGACTGGCTCTGTGGG...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGAAGTGCTTGCGGAGGCTaGGGGCCAGACACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGSACGG*GPDTSG
Trigger: CCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACT...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACCTTGGCCTCACCCGGTaGAGCTGGCGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHLGLTR*SWRDGV
Trigger: CACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAG...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHTGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: SISAKAWAPTLPMLFPTRRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCGTCACCCACTCTGTTaGCCCAGAATCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHRHPLC*PRIPGT
Trigger: AGTTCCTGGGATTCTGGGGCAACAGAGTGGGTGACG...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGCTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: ESQELQGGVASEPLGQHLLGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...CAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CACCAGGCTGAGCCACCTCAAGCTCTGGTGATCACCCAAGGCTTCAGCCAGGGCCTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: HQAEPPQALVITQGFSQGLGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTGGCTCAGCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: APTLPMLFPTRLSHLKLWLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp GCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: ASVPRLGHPHCQCCSPPGLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...GCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp AAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KASARAWAPSSPTLLPQNLTTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAG...ATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000524712.5
ENST00000529633.5
ENST00000534067.5
CDS-3UTR GCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGCAACCGCGAGCCGCCTaGGCGCCGACTCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKQPRAA*APTPRP
Trigger: GGGCCTTGGAGTCGGCGCGCAGGCGGCTCGCGGTTG...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGTTCTCCTCCTTGTGCCCACATCTAAGCAGAGGAGCCAAGAGGGTGGGGTGGGCTGGGACGGGACAATaGCTGCTCCTCTTACCCGGA +
Preference number: 4 (lower is better)
Translates to: EFSSLCPHLSRGAKRVGWAGTGQ*LLLLPG
Trigger: TCCGGGTAAGAGGAGCAGGCATTGTCCCGTCCCAGC...CCACCCCACCCTCTTGGCTCCTCTGCTTAGATGTGGGCACAAGGAGGAGAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp AGTGTTGCAAAGCAGGGTGGCAGAGGCGAAGCTGGGCCCAGACTTCTAGAGCCCGGATCTGGGCAGTGTTaGAAAGCAGGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SVAKQGGRGEAGPRLLEPGSGQC*KAGWQR
Trigger: CCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCC...GGGCTCTAGAAGTCTGGGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR CCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTTCGGCCTGGGCTTCTTaGGCAGCCGCGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGDFKARVWCPCSRACQPSAWAS*AAAMSF
Trigger: GAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGA...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AGCTTGGCCATATACTTCTTGCATGTGGCAGCTTCCAAAGGCAGGGCCAATGGGGACTGGCTGTCGGCCTaGGCTTCTTGGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: SLAIYFLHVAASKGRANGDWLSA*ASWAAA
Trigger: CGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTC...CCCATTGGCCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCCTGCAGGTCTCGGGCTaGGTGGAGCGAGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KAANPFAFTVARSSSLLALQVSG*VERVGV
Trigger: GACCCCCACTCGCTCCACCCAGCCCGAGACCTGCAG...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTGCAGGTCTCGGGCTaGGTGGAGCGAGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNLQVSG*VERVGV
Trigger: GACCCCCACTCGCTCCACCCAGCCCGAGACCTGCAG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTCCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HQCQGLGTHTANVVPHQAPPDNG*PVTLQV
Trigger: GACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGG...AGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGACAGCGGCCGGACGGCTaGTCACCACCTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: GDATPPSQPDAKPFKEVGQRPDG*SPPCGH
Trigger: ATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTG...TCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGTGTCGTGGGCAGGAGCCTaGCCATTGGTGAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: THTANVVPHQAEPPQALVSWAGA*PLVSCL
Trigger: CAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGA...CACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTCAGCGGGCACAGGCCTaGCGCCGGAGCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFQRAQA*RRSRAF
Trigger: GAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTG...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGACTCACCCGGTGCAGCTaGCGGGATGGAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGLTRCS*RDGVEV
Trigger: CACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAG...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp GAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGACCAGAGACGGGGAATaGCCTGGATGGATGAGTCGA +
Preference number: 4 (lower is better)
Translates to: ESQELQGGVASEPLGQHLTRDGE*PGWMSR
Trigger: TCGACTCATCCATCCAGGCCATTCCCCGTCTCTGGT...CAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR CAA 72 bp ATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ISAKAWAPTLPM*FPTRLSHLKLW
Trigger: CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp GAAACCCCGCTCCCATGCCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTCTTTCCTCCTCATCGTaGGAGGCTGAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: ETPLPCQVQHVLHMAVEPLSSSS*EAEPPS
Trigger: AGAGGGTGGTTCAGCCTCTCACGATGAGGAGGAAAG...AGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTA +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCAAMSF*QAQVPL
Trigger: TAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGC...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMTMAGR*LCRSRA
Trigger: AGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGT...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSGCGAS*QWLAGD
Trigger: GTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGTGCGGATGTACTTCCTaGGGAACGCCGACACAGCGG +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRCGCTS*GTPTQR
Trigger: CCGCTGTGTCGGCGTTCCTCAGGAAGTACATCCGCA...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTTGCGGATGTACTTCCTaGGGAACGCCGACACAGCGG +
Preference number: 4 (lower is better)
Translates to: PGDFKARVWCPCSRACQPCGCTS*GTPTQR
Trigger: CCGCTGTGTCGGCGTTCCTCAGGAAGTACATCCGCA...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LGTHTANVVPHQAEPPQAHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp AGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SISAKAWAPTLPMLFPTRHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR TCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGAATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGTAAGGGGTCTTTTGTaGGAGGCCGGGCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DEHPPGDFKARVWCPCSRVRGLL*EAGPLH
Trigger: GTGGAGAGGCCCGGCCTCTCACAAAAGACCCCTTAC...TCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGGAAAGCTGCTTCCTaGATTATGTGTTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ELQGGVASEPLGQHLGSRGKAAS*IMCSVY
Trigger: GTACACAGAACACATAATTCAGGAAGCAGCTTTCCC...GCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GGCCTGGGCTTCTTGGGCAGCCGCGATGAGCTTCTGACAGGCCCAAGTACCCTTTCCGAGGAGGACACTTaGTCTTTCCTCCTCATCGTG +
Preference number: 4 (lower is better)
Translates to: GLGFLGSRDELLTGPSTLSEEDT*SFLLIV
Trigger: CACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGA...AAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp CAGCTGTGGAAACACCAGCCAAGGATGCGACAGCGGCCCCCACCATTGACCCTGATCAAGCAGCCTTCTTaGCCTCTGGGACGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: QLWKHQPRMRQRPPPLTLIKQPS*PLGRCE
Trigger: TTCACACCGTCCCAGAGGGCAAGAAGGCTGCTTGAT...CAGGGTCAATGGTGGGGGCCGCTGTCGCATCCTTGGCTGGTGTTTCCACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCCCACAGAGCCAGTCTaGCCAGGTGCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNPTEPV*PGAGGW
Trigger: CCACCCTCCTGCACCTGGGCAGACTGGCTCTGTGGG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCCTCCGAGGCCTGGATaGACATCGTGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNPPRPG*TSWAGA
Trigger: GGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGTGCGGCTCGGCCTTCTaGAGCAAAGCTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMCGSAF*SKAATL
Trigger: CAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCA...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACAACCCGGGCATGGCATaGACGCTCTTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHNPGMA*TLLASP
Trigger: GGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTT...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGAACATTCAGGCCACGTaGAGCCTTCCGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRNIQAT*SLPSQP
Trigger: CGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLSERRLNTTFLLICCIRGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp AAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCCTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: KAWAPTLPMLFPTRLSHLLGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...GAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp AGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SAKAWAPTLPMLFPTRLSLGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR GCA 90 bp CACCAGGCTGAGCCACCTCAAGCTCTGGTGATCACCCAAGGCTTCAGCCAGGGCCTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HQAEPPQALVITQGFSQGLTTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAG...GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTGGCTCAGCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524712.5
ENST00000529633.5
ENST00000534067.5
CDS-3UTR GCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCAACCGCGAGCCGCCTaGGCGCCGACTCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRQPRAA*APTPRP
Trigger: GGGCCTTGGAGTCGGCGCGCAGGCGGCTCGCGGTTG...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTACAACCGCGAGCCGCCTaGGCGCCGACTCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: CHTTESARRKTFQGSRILQPRAA*APTPRP
Trigger: GGGCCTTGGAGTCGGCGCGCAGGCGGCTCGCGGTTG...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGACTGGCTGTCGGCCTaGGCTTCTTGGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWDWLSA*ASWAAA
Trigger: CGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACAGGGCTGAGGTCTCTTaGAGCAGGCGGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDRAEVS*SRRMRR
Trigger: CCGCCTCATCCGCCTGCTCCAAGAGACCTCAGCCCT...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGCCAGGTGCAGGAGGGTaGGGAGGCGGCCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWPGAGG*GGGPEE
Trigger: TTCTTCGGGGCCGCCTCCCCACCCTCCTGCACCTGG...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGGCACGACACCTTTaGCACGCACCAGGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SISAKAWAPTLPMLFPTRLARHL*HAPGSQ
Trigger: TTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAG...CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGTCGTGGGCAGGAGCCTaGCCATTGGTGAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRSWAGA*PLVSCL
Trigger: CAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGA...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCAGCGGGCACAGGCCTaGCGCCGGAGCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRQRAQA*RRSRAF
Trigger: GAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTG...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: GTHTANVVPHQAEPPQALISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...CAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCGCCAAGAGGGTGGGGTaGCCGAGGACAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KAANPFAFTVARSSSLLAAKRVG*PRTGEE
Trigger: CTCTTCCCCTGTCCTCGGCCACCCCACCCTCTTGGC...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACCTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHLGQPR*ASDRPK
Trigger: CTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAG...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGACTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GDATPPSQPDAKPFKEVGLGQPR*ASDRPK
Trigger: CTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAG...TCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCCATGTTGGTCAGGTTGGTCTCAAACCCCCAACCTCAGGTGATCTGCCCACCTCTGAGGAAGCGAGACTaGGCAGACACCGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SMLVRLVSNPQPQVICPPLRKRD*ADTVVL
Trigger: GAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAG...AGGTGGGCAGATCACCTGAGGTTGGGGGTTTGAGACCAACCTGACCAACATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGCTGAGGAAGCGAGACTaGGCAGACACCGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMLRKRD*ADTVVL
Trigger: GAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAG...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGCCACCCCGGGCTCATaGTGGCGCTTCCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWATPGS*WRFLRY
Trigger: GTACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGACTTGGAGCAGGCGGATaGGGCGGTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRLGAGG*GGPPPR
Trigger: CCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAG...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGTGCTCCCCCATACCTaGACAGCAATGCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: HQCQGLGTHTANVVPHQAVLPHT*TAMPSN
Trigger: GTTACTGGGCATTGCTGTTCAGGTATGGGGGAGCAC...AGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR TCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGGAGGACAACGGTGTaGTCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHWRTTV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACACCGTTGTCCTCCA...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGCCTGGCCTCATTGCTaGATGAATTTAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: ELQGGVASEPLGQHLGSRAWPHC*MNLKMT
Trigger: TGTCATCTTTAAATTCATTCAGCAATGAGGCCAGGC...GCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRETPLP*QVQHVL
Trigger: GAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGCCGCTGCAGGAGCGTaGTCTTGCCACTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAAAAGA*SCHCPP
Trigger: AGGCGGGCAGTGGCAAGAGCACGCTCCTGCAGCGGC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAGCAGCCCACAGCAAGTaGAGCCGCTGCAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTAAHSK*SRCRSV
Trigger: CACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGC...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTAATTCCTGGAAGTCTTaGCCTGCAGCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: QGLGTHTANVVPHQAEPPNSWKS*PAAHSK
Trigger: CTTGCTGTGGGCTGCAGGGCAAGACTTCCAGGAATT...AGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCCATGCACTGCAGCTaGCGGCAGCTGAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDAMHCS*RQLNGK
Trigger: CTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCCTCCGAGGCCTGGATaGACATCGTGGGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLPPRPG*TSWAGA
Trigger: GGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGATGCGGCTCGGCCTTCTaGAGCAAAGCTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGCGSAF*SKAATL
Trigger: CAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCA...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGCCCTGCCAGGAAGGCTaGTGTGATCTGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GSREMPHHRVSQTQNLSRPCQEG*CDLKVV
Trigger: CACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGG...CCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGGCCAGCAGGCCCCAGTaGTCCCGGGACAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKASRPQ*SRDNSP
Trigger: AGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGC...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAGCCAGCCGCTCCTCCTaGATCTCGTACAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTASRSS*ISYRLR
Trigger: CCGGAGCCTGTACGAGATGCAGGAGGAGCGGCTGGC...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATACTGCAAGGAGGTGTTaGCTCGGAGCCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNTARRC*LGAPRP
Trigger: TGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAAGACATGGGGAAAGCTaGTTCCTGAATTATGTGTTC +
Preference number: 4 (lower is better)
Translates to: TQGFSQGLGPLVTHSVAPRHGES*FLNYVF
Trigger: GAACACATAATTCAGGAAGCAGCTTTCCCCATGTCT...TGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GAGTTCTCCTCCTTGTGCCCACATCTAAGCAGAGGAGCCAAGAGGGTGGGGTGGGGACGGGACAATGCCTaGTCCTCTTACCCGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EFSSLCPHLSRGAKRVGWGRDNA*SSYPEN
Trigger: ATTCTCCGGGTAAGAGGAGCAGGCATTGTCCCGTCC...CCACCCCACCCTCTTGGCTCCTCTGCTTAGATGTGGGCACAAGGAGGAGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTGTACGGGGAGGCTCCTaGACAGCTGAAAACTTCACG +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCVRGGS*TAENFT
Trigger: CGTGAAGTTTTCAGCTGTGCAGGAGCCTCCCCGTAC...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTGCCTGCATGAGAGGCTaGTCGCTGTGGAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCACMRG*SLWRAS
Trigger: GCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGC...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp AGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCGCTATGCAAATGGGCTaGTGTGTGTACTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SAKAWAPTLPMLFPTRLSAMQMG*CVYSSA
Trigger: CGCTGAGGAGTACACACAGCAGCCCATTTGCATAGC...GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCCTGGGGGAGCAGGCATaGCATCTGCGGGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KAANPFAFTVARSSSLLALGEQA*HLRVGL
Trigger: AAGGCCTACCCGCAGATGCCATGCCTGCTCCCCCAG...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATTCGGCCTGGGCTTCTTaGGCAGCCGCGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNSAWAS*AAAMSF
Trigger: GAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGA...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTTGCATGTCGGCCTGGGCTTCTTaGGCAGCCGCGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SETEQTPWSSAWPYTSCMSAWAS*AAAMSF
Trigger: GAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGA...CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAGCAGCCATGCAGCTTaGGGGACTGGCTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHSSHAA*GTGCRP
Trigger: AGGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCT...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGAAGCAGCCATGCAGCTTaGGGGACTGGCTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGSSHAA*GTGCRP
Trigger: AGGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCT...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGCCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMPPDNG*PVTLQV
Trigger: GACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGG...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAAGCCTTCTTGCCCTCTaGGACGGTGTGAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: DEHPPGDFKARVWCPCSRSLLAL*DGVKIG
Trigger: GCCGATCTTCACACCGTCCCAGAGGGCAAGAAGGCT...TCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGTCCGCACAGAGAGTaGTTTGGCCATGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ISAKAWAPTLPMLFPTRLSPHRE*FGHALQ
Trigger: CTGCAGTGCATGGCCAAACCACTCTCTGTGCGGACT...CAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGAGGACACGGTCAGGGTaGTCAAGGAGTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: APTLPMLFPTRLSHLKLWRTRSG*SRSNWK
Trigger: CTTCCAGTTACTCCTTGACCACCCTGACCGTGTCCT...CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTCAGCGGCCGGACGGCTaGTCACCACCTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFQRPDG*SPPCGH
Trigger: ATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTG...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGCTGACCTGTGCTGCCTaGAGCTGCTGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMLTCAA*SCWAEN
Trigger: GTTCTCAGCCCAGCAGCTCCAGGCAGCACAGGTCAG...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCCTTCTCAGATGTCTaGCACTCAGCCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDAFSDV*HSASRP
Trigger: GGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGCTGGCGGGATGGAGTaGAAGTGCTTGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSAGGME*KCLRRL
Trigger: CAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAGGGGAATGGCCTGGATaGATGAGTCGAGACATGGGG +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGGEWPG*MSRDMG
Trigger: CCCCATGTCTCGACTCATCCATCCAGGCCATTCCCC...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAAACCCCGCTCCCATGCCAGGTCCAGCATGTTCTCCACATGGCTGTGGAGCCTAATAAGCTCTGGGCTTaGCCCTGGAGTGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ETPLPCQVQHVLHMAVEPNKLWA*PWSGSQ
Trigger: CTGAGAACCACTCCAGGGCCAAGCCCAGAGCTTATT...AGGCTCCACAGCCATGTGGAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAACCCTGCAGAGGCCACTaGAAGCCAGGATCTAAGGTA +
Preference number: 4 (lower is better)
Translates to: PGIPEPGTALSPTKTLREPCRGH*KPGSKV
Trigger: TACCTTAGATCCTGGCTTCCAGTGGCCTCTGCAGGG...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCCATGTTGGTCAGGTTaGTCTCAAACCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: QGLGTHTANVVPHQAEPPPCWSG*SQTPNL
Trigger: GAGGTTGGGGGTTTGAGACCAACCTGACCAACATGG...AGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR CAA 72 bp AAATTAAGGCCCAGAAGGGAAGGGATCTGGGCAGTGTaGCAAAGCAGGGTGGCAGAGGCGAAGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KLRPRREGIWAV*QSRVAEAKLGP
Trigger: TGGGCCCAGCTTCGCCTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCCTTCCCTTCTGGGCCTTAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWTMAGR*LCRSRA
Trigger: AGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGT...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAGCGAS*QWLAGD
Trigger: GTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGACACATTCATACTGGCTaGCGAAACCCCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: DEHPPGDFKARVWCPCSRHIHTG*RNPAPM
Trigger: CATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTG...TCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTCTGAGGAAGCGAGACTaGGCAGACACCGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCLRKRD*ADTVVL
Trigger: GAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAG...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAACTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PGIPEPGTALSPTKTLRELHHRY*GSETEQ
Trigger: CTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAG...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGAAATGTCATCAGGGCTaGCCTGTGCTGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRKCHQG*PVLPGA
Trigger: AGCTCCAGGCAGCACAGGTCAGCCCTGATGACATTT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGTAAACCTTCTCCATCCTTCTGTGTGGCACATCAGCACTaGGTGCCAGGTAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: EAARCGEPAISKPSPSFCVAHQH*VPGRTR
Trigger: CCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCAC...ACAGAAGGATGGAGAAGGTTTACTTATGGCTGGCTCTCCACAGCGAGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGTGGCACATCAGCACTaGGTGCCAGGTAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPVAHQH*VPGRTR
Trigger: CCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCAC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAGAGCCTGGCCATTGGTaGGTTGCCTGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LLSERRLNTTFLLICCIREPGHW*VAWPAT
Trigger: TGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTC...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAGCCTGGCCATTGGTaGGTTGCCTGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWEPGHW*VAWPAT
Trigger: TGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAAGGCTGCTGTGATCTaGAGGTTGTGCGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHKAAVI*RLCGSA
Trigger: GGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTT...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWGLPRQ*CSYSPA
Trigger: GGCTGGGGAATAACTACATCACTGCCGCGGGAGCCC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLGLPRQ*CSYSPA
Trigger: GGCTGGGGAATAACTACATCACTGCCGCGGGAGCCC...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCTGCCCCTAGGTAGGTaGTGCAGTTATTGGACAACT +
Preference number: 4 (lower is better)
Translates to: QGLGTHTANVVPHQAEPPLPLGR*CSYWTT
Trigger: AGTTGTCCAATAACTGCATCACCTACCTAGGGGCAG...AGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGAGTAAGGGGTCTTTTGTaGGAGGCCGGGCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GDATPPSQPDAKPFKEVGVRGLL*EAGPLH
Trigger: GTGGAGAGGCCCGGCCTCTCACAAAAGACCCCTTAC...TCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGTAAGGGGTCTTTTGTaGGAGGCCGGGCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPVRGLL*EAGPLH
Trigger: GTGGAGAGGCCCGGCCTCTCACAAAAGACCCCTTAC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCCATTTGCACAGCATCTaGCAATTTACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: ELQGGVASEPLGQHLGSRHLHSI*QFTKAS
Trigger: TGAAGCCTTTGTAAATTGTCAGATGCTGTGCAAATG...GCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GAGTTCTCCTCCTTGTGCCCACATCTAAGCAGAGGAGCCAAGAGGGTGGGGTGGTGTCGCGGCCAAGGATaGAAGAAGGCTGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: EFSSLCPHLSRGAKRVGWCRGQG*KKAEDQ
Trigger: TTGATCCTCAGCCTTCTTTCATCCTTGGCCGCGACA...CCACCCCACCCTCTTGGCTCCTCTGCTTAGATGTGGGCACAAGGAGGAGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGATGGAGGACAACGGTGTaGTCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: DEHPPGDFKARVWCPCSRWRTTV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACACCGTTGTCCTCCA...TCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGGGTCCCAGCAGCCATaGAGCTTGGGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAGSQQP*SLGDWL
Trigger: CAGCCAGTCCCCCAAGCTGCATGGCTGCTGGGACCC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGCCACTGGAAGCCAGGATCTAAGGTAGTTCTCTCAGGCCAAGGAGTTCTCCTCGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GHWKPGSKVVLSGQGVLLETPLP*QVQHVL
Trigger: GAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC...GAGGAGAACTCCTTGGCCTGAGAGAACTACCTTAGATCCTGGCTTCCAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCGCCATGCACTGCAGCTaGCGGCAGCTGAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFAMHCS*RQLNGK
Trigger: CTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGC...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGGCTGGTCACCACCTTaGGGGCATTCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDGWSPP*GHSSAG
Trigger: ACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTCACATCAGCACTGAGTaGCAGGTAGAACGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCHISTE*QVERGK
Trigger: TTTGCCGCGTTCTACCTGGCACTCAGTGCTGATGTG...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATGCAAAGCTGCCACGCTaGTGTCCTTTCCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNAKLPR*CPFPPR
Trigger: CCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGC...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGCAAAGCTGCCACGCTaGTGTCCTTTCCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSAKLPR*CPFPPR
Trigger: CCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGAACCCGGGCATGGCATaGACGCTCTTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWNPGMA*TLLASP
Trigger: GGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTT...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATGCCAGCCGCTCCTCCTaGATCTCGTACAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYASRSS*ISYRLR
Trigger: CCGGAGCCTGTACGAGATGCAGGAGGAGCGGCTGGC...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCAACATTCAGGCCACGTaGAGCCTTCCGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFNIQAT*SLPSQP
Trigger: CGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTT...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCAACATTCAGGCCACGTaGAGCCTTCCGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSNIQAT*SLPSQP
Trigger: CGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACAATGTCAACTTGAGGTaGCCAACATTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHNVNLR*PTFRPR
Trigger: ACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATT...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGCGTCACCCACTCTGTTaGCCCAGAATCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRRHPLC*PRIPGT
Trigger: AGTTCCTGGGATTCTGGGGCAACAGAGTGGGTGACG...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGTAAACCTTCTCCATCCTTCTGTAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EAARCGEPAISKPSPSFCRGRSV*RSPGGG
Trigger: CCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCT...ACAGAAGGATGGAGAAGGTTTACTTATGGCTGGCTCTCCACAGCGAGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCATGTCCAGAAGGCGCCTaGCCAAGTGGGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPCPEGA*PSGREA
Trigger: AGCCTCTCTCCCACTTGGCCAGGCGCCTTCTGGACA...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACTGTCCAGAAGGCGCCTaGCCAAGTGGGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHCPEGA*PSGREA
Trigger: AGCCTCTCTCCCACTTGGCCAGGCGCCTTCTGGACA...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTCCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCPPDNG*PVTLQV
Trigger: GACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGG...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAAGTCCGCACAGAGAGTaGTTTGGCCATGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGSPHRE*FGHALQ
Trigger: CTGCAGTGCATGGCCAAACCACTCTCTGTGCGGACT...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGTTGAAGAGCAGGGTCTaGACAGAGGTGGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMLKSRV*TEVGSV
Trigger: GACCGACCCCACCTCTGTCCAGACCCTGCTCTTCAA...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCAGCGGCCGGACGGCTaGTCACCACCTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRQRPDG*SPPCGH
Trigger: ATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGAGGCCCCGAAGAAGACTaGGTCCCAGACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGGPEED*VPDLGK
Trigger: CTTCCCAAGGTCTGGGACCCAGTCTTCTTCGGGGCC...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGCCAGGTGCAGGAGGGTaGGGAGGCGGCCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILPGAGG*GGGPEE
Trigger: TTCTTCGGGGCCGCCTCCCCACCCTCCTGCACCTGG...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGACTGACCTGTGCTGCCTaGAGCTGCTGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGLTCAA*SCWAEN
Trigger: GTTCTCAGCCCAGCAGCTCCAGGCAGCACAGGTCAG...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTCTGAGCAAAGCTGGTaGCACATCAGCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHSEQSW*HISTEC
Trigger: GCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGA...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGTGCAGCTGGCGGGATaGAGTGGAAGTGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSVQLAG*SGSACG
Trigger: TCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCAC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATGTGCAGCTGGCGGGATaGAGTGGAAGTGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNVQLAG*SGSACG
Trigger: TCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCAC...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTCTGTATCCGTCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAAGAGGAGCCAAGAGGGTaGGGTGGCCGAGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: LCIRPHTVAKVSKRRKLQEEPRG*GGRGQG
Trigger: CCCCTGTCCTCGGCCACCCCACCCTCTTGGCTCCTC...TTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGACGGATACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGCTGTATCAGAAACAATaGTCTGGGCAGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: ESQELQGGVASEPLGQHLLYQKQ*SGQNRA
Trigger: TGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAG...CAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
3UTR CAA 72 bp GCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTaGCATGTGGCAGCTTCCAAAGGCAGGGCCAATGGG +
Preference number: 4 (lower is better)
Translates to: ADTVVLSLAIYF*HVAASKGRANG
Trigger: CCCATTGGCCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp AGCTTGGCCATATACTTCTTGCATGTGGCAGCTTCCAAAGGCAGGGCCAATGGGGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTA +
Preference number: 4 (lower is better)
Translates to: SLAIYFLHVAASKGRANGAAMSF*QAQVPL
Trigger: TAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGC...CCCATTGGCCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMATMAGR*LCRSRA
Trigger: AGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGT...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGCCCTCTGGGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: CPLGRCEDRQPDFITFILTMAGR*LCRSRA
Trigger: AGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGT...CAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCCCAGAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp CTCTGTATCCGTCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAAGGCTGTGGAGCCTCCTaGCAATGGCTGGCCGGTGAC +
Preference number: 4 (lower is better)
Translates to: LCIRPHTVAKVSKRRKLQGCGAS*QWLAGD
Trigger: GTCACCGGCCAGCCATTGTCAGGAGGCTCCACAGCC...TTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGACGGATACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp AAACAGAGTCAGCACTCCCCATCTGACCCCAGGCCTGGGAGCATGTCGCGGCCAGGGACTGGTAATTCCTaGACATGTTGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KQSQHSPSDPRPGSMSRPGTGNS*TCCRRK
Trigger: CTTCCTTCTACAACATGTTCAGGAATTACCAGTCCC...TGGCCGCGACATGCTCCCAGGCCTGGGGTCAGATGGGGAGTGCTGACTCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACGGGACTGGTAATTCCTaGACATGTTGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHGTGNS*TCCRRK
Trigger: CTTCCTTCTACAACATGTTCAGGAATTACCAGTCCC...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGCTTGGAGCAGGCGGATaGGGCGGTCCGCCACCCCGG +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKLGAGG*GGPPPR
Trigger: CCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAG...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCAAACCGTGCAGGGCTaGGGTCTCTTGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGQTVQG*GLLEQA
Trigger: CGCCTGCTCCAAGAGACCTCAGCCCTGCACGGTTTG...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGGAGCCTGGCCATTGGTaGGTTGCCTGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKEPGHW*VAWPAT
Trigger: TGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTC...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAGCCTGGCCATTGGTaGGTTGCCTGGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFEPGHW*VAWPAT
Trigger: TGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTC...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCCAGGAAGGCTGCTGTaGTCTGAAGGTTGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSPGRLL*SEGCAA
Trigger: AGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGG...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ACTATTTTAACACAAGGCCTGCATGAGAGGCTGCTCGCTGTGGAGAGCCAGCCACCAGGAAGGCTGCTGTaGTCTGAAGGTTGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: TILTQGLHERLLAVESQPPGRLL*SEGCAA
Trigger: AGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGG...TGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCCCGCGGCAGTGATGTAGTTATTCCCCAGCCTGAACAGCAATGCCCAGTAACACACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SRGSDVVIPQPEQQCPVTHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...TGTTACTGGGCATTGCTGTTCAGGCTGGGGAATAACTACATCACTGCCGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529633.5
CDS-3UTR TCA 90 bp ACTATTTTAACACAAGGCCTGCATGAGAGGCTGCTCGCTGTGGAGAGCCAGCCACACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TILTQGLHERLLAVESQPHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...TGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLCSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTCTGCCCCTAGGTAGGTaGTGCAGTTATTGGACAACT +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCLPLGR*CSYWTT
Trigger: AGTTGTCCAATAACTGCATCACCTACCTAGGGGCAG...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTGGACAGGGCTCATTTTaGAGAGGCTGCCAACACATG +
Preference number: 4 (lower is better)
Translates to: PGDFKARVWCPCSRACQPGQGSF*RGCQHM
Trigger: CATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCC...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAGGCTCCTGCACAGCTaGAAACTTCACGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GSREMPHHRVSQTQNLSRRLLHS*KLHGVK
Trigger: TTTAACCCCGTGAAGTTTTCAGCTGTGCAGGAGCCT...CCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAGGCAGAGCGTCTCTaGTCCATCATAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: HPPGDFKARVWCPCSRACQAERL*SIIGTE
Trigger: CTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTG...ACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAGCGTGCTCTTGCCACTaGCCGCCTCACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPACSCH*PPHPPP
Trigger: TGGTGGTGGGTGAGGCGGGCAGTGGCAAGAGCACGC...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGGCGTGCTCTTGCCACTaGCCGCCTCACCCACCACCA +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRACSCH*PPHPPP
Trigger: TGGTGGTGGGTGAGGCGGGCAGTGGCAAGAGCACGC...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAGCCGCTGCAGGAGCGTaGTCTTGCCACTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKAAAGA*SCHCPP
Trigger: AGGCGGGCAGTGGCAAGAGCACGCTCCTGCAGCGGC...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTGCCGCTGCAGGAGCGTaGTCTTGCCACTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSAAAGA*SCHCPP
Trigger: AGGCGGGCAGTGGCAAGAGCACGCTCCTGCAGCGGC...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGGCAAAGCTGCCACGCTaGTGTCCTTTCCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLAKLPR*CPFPPR
Trigger: CCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGC...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCGCCAGCAGGCCCCAGTaGTCCCGGGACAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPASRPQ*SRDNSP
Trigger: AGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGC...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGAACCCGGGCATGGCATaGACGCTCTTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKNPGMA*TLLASP
Trigger: GGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTT...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSTGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACGCAAATACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHANTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTATTTGC...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000647318.2
CDS-3UTR GCA 90 bp GAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGAATGCCAAGAAGTTCTaGCTGCATGCAAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: ESQELQGGVASEPLGQHLNAKKF*LHARSL
Trigger: TAAGCTCCTTGCATGCAGGCAGAACTTCTTGGCATT...CAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGTACGGGGAGGCTCCTaGACAGCTGAAAACTTCACG +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDVRGGS*TAENFT
Trigger: CGTGAAGTTTTCAGCTGTGCAGGAGCCTCCCCGTAC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCAAAGCCCATTAGGCTaGGGGAGCAGGCATGGCATC +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSQSPLG*GSRHGI
Trigger: GATGCCATGCCTGCTCCCCCAGCCTAATGGGCTTTG...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR CCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGACTGCAGGTCTCGGGCTaGGTGGAGCGAGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRLQVSG*VERVGV
Trigger: GACCCCCACTCGCTCCACCCAGCCCGAGACCTGCAG...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAATCATCACATTCATACTaGCTGACGAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PGIPEPGTALSPTKTLRESSHSY*LTKPRS
Trigger: GGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGA...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CCTGGCATCCCTGAGCCTGGCACAGCATTGTCCCCCACAAAGACACTGAGGGAACATTCGCTTTCACCGTaGCAAGATCAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PGIPEPGTALSPTKTLREHSLSP*QDQAAF
Trigger: GAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATG...TTCCCTCAGTGTCTTTGTGGGGGACAATGCTGTGCCAGGCTCAGGGATGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGCATCGTCATTGAGGTaGCCAGGGGTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSASSLR*PGVLKS
Trigger: GCTCTTCAGCACCCCTGGCCACCTCAATGACGATGC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGAGGACACGGTCAGGGTaGTCAAGGAGTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRRTRSG*SRSNWK
Trigger: CTTCCAGTTACTCCTTGACCACCCTGACCGTGTCCT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTAGGACACGGTCAGGGTaGTCAAGGAGTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGDFKARVWCPCSRACQPRTRSG*SRSNWK
Trigger: CTTCCAGTTACTCCTTGACCACCCTGACCGTGTCCT...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGTCGGTCGGGGAGCAGTaGCGTTCACGATCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLSVGEQ*RSRSVN
Trigger: GTTCACGGATCGTGAACGCCACTGCTCCCCGACCGA...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCTTGAAGAGCAGGGTCTaGACAGAGGTGGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSLKSRV*TEVGSV
Trigger: GACCGACCCCACCTCTGTCCAGACCCTGCTCTTCAA...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTCAGCGGCCGGACGGCTaGTCACCACCTTGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSQRPDG*SPPCGH
Trigger: ATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTG...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTTGCAGCAACAGTTCCTaGTGGCATTTGGACACCATC +
Preference number: 4 (lower is better)
Translates to: LGGSAEASPILWRRGCPCCSNSS*WHLDTI
Trigger: GATGGTGTCCAAATGCCACCAGGAACTGTTGCTGCA...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCACTGGCACGACACCTTTaGCACGCACCAGGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPLARHL*HAPGSQ
Trigger: TTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAG...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCCAGGGACTGGCACGACACCTTTaGCACGCACCAGGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GHQSQRKPIDTLPCRVQGLARHL*HAPGSQ
Trigger: TTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAG...TCCCTGGACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAGCCTTCTCAGATGTCTaGCACTCAGCCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSERRLNTTFLLICCIRAFSDV*HSASRP
Trigger: GGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGC...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGGTGCAGCTGGCGGGATaGAGTGGAAGTGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLVQLAG*SGSACG
Trigger: TCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCAC...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGCTTCAGCCAGGGCCTaGGCCCCCTCGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRAASARA*APSSPT
Trigger: AGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGC...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATGGCCACGTGGGAGCCTaGGTCTTACTCGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IGNLISSHSYWLTKPRSHGHVGA*VLLVLA
Trigger: TGCCAGGACGAGTAAGACCCAGGCTCCCACGTGGCC...ATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCATCAGAAACAATGGTCTaGGCAGAACAGGGCACCAAT +
Preference number: 4 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPSETMV*AEQGTN
Trigger: ATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGA...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCAACAGTGCTATGCAAATaGGCTGCTGTGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPTVLCK*AAVCTP
Trigger: AGGAGTACACACAGCAGCCCATTTGCATAGCACTGT...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRLGQPR*ASDRPK
Trigger: CTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAG...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAACAATGGCTGGCCGGTaGCTCTGCAGGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPTMAGR*LCRSRA
Trigger: AGCCCGAGACCTGCAGAGTCACCGGCCAGCCATTGT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACCACATTCATACTGGCTaGCGAAACCCCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHHIHTG*RNPAPM
Trigger: CATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTG...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACCTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHLHHRY*GSETEQ
Trigger: CTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAG...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACGCCACCCCGGGCTCATaGTGGCGCTTCCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHATPGS*WRFLRY
Trigger: GTACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGC...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCTGGAGCTGCTGGGCTaGGAACACGTAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLLELLG*EHVAAH
Trigger: ATGTGCTGCTACGTGTTCTCAGCCCAGCAGCTCCAG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAAAATGTCATCAGGGCTaGCCTGTGCTGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPKCHQG*PVLPGA
Trigger: AGCTCCAGGCAGCACAGGTCAGCCCTGATGACATTT...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGGTGGCACATCAGCACTaGGTGCCAGGTAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKVAHQH*VPGRTR
Trigger: CCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCAC...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAA +
Preference number: 4 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGADASV*DIVIAQ
Trigger: TTGCGCGATAACAATATCTCAGACCGAGGCATCTGC...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACACACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACATCCATGGGCCCCACTaGCCCACACGGAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHIHGPH*PTRKPG
Trigger: CCCAGGCTTCCGTGTGGGTCAGTGGGGCCCATGGAT...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGAATGGCCTGGATGGATaGGTCGAGACATGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMNGLDG*VETWGK
Trigger: CTTTCCCCATGTCTCGACTCATCCATCCAGGCCATT...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTTGGGGGTGCTGTAAGTaGAATATCAAAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGTHTANVVPHQAEPPQAWGCCK*NIKAEV
Trigger: GACCTCAGCTTTGATATTTCACTTACAGCACCCCCA...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp TGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAACCCACCCCCAACCTCAGGTaGTCTGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: CIRNNGLGRTGHQSQRKPTPNLR*SAHLGL
Trigger: GAGGCCGAGGTGGGCAGATCACCTGAGGTTGGGGGT...GGGTTTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGAACACAAGGCCTGCATaGGAGGCTGCTCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWNTRPA*EAARCG
Trigger: TCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTT...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGTCCGAGGAGGACACTTaGTCTTTCCTCCTCATCGTG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMSEEDT*SFLLIV
Trigger: CACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGA...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR GCA 90 bp TCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAATCTCTCAGAACGGGTCCCAGCAGCCATaGAGCTTGGGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSYGSQGKQKEKAPISQNGSQQP*SLGDWL
Trigger: CAGCCAGTCCCCCAAGCTGCATGGCTGCTGGGACCC...GTTCTGAGAGATTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp TGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAACCCGGGTCCCAGCAGCCATaGAGCTTGGGGGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: CIRNNGLGRTGHQSQRKPGSQQP*SLGDWL
Trigger: CAGCCAGTCCCCCAAGCTGCATGGCTGCTGGGACCC...GGGTTTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp AGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCTGGCCATATACTTCTTaGATGTGGCAGCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SAKAWAPTLPMLFPTRLSWPYTS*MWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCA...GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGAATTCCTGGAAGTCTTaGCCTGCAGCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMNSWKS*PAAHSK
Trigger: CTTGCTGTGGGCTGCAGGGCAAGACTTCCAGGAATT...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAATCAGGGCTGACCTGTaGTGCCTGGAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPIRADL*CLELLG
Trigger: GCCCAGCAGCTCCAGGCAGCACAGGTCAGCCCTGAT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGCAAAGCTGCCACGCTaGTGTCCTTTCCCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAAKLPR*CPFPPR
Trigger: CCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTCCCTGCCAGGAAGGCTaGTGTGATCTGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCPCQEG*CDLKVV
Trigger: CACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGG...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCCTTGGCCTCACCCGGTaGAGCTGGCGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPLGLTR*SWRDGV
Trigger: CACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAG...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTCTTGGCCTCACCCGGTaGAGCTGGCGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSLGLTR*SWRDGV
Trigger: CACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAG...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATAACATTCAGGCCACGTaGAGCCTTCCGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYNIQAT*SLPSQP
Trigger: CGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTACTGCAAGGAGGTGTTaGCTCGGAGCCCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSTARRC*LGAPRP
Trigger: TGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMARGRSV*RSPGGG
Trigger: CCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCT...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCAGCCTGAACAGCAATaGCCAGTAACACTCACTACA +
Preference number: 4 (lower is better)
Translates to: LGTHTANVVPHQAEPPQAQPEQQ*PVTLTT
Trigger: TGTAGTGAGTGTTACTGGGCATTGCTGTTCAGGCTG...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529633.5
CDS-3UTR GCA 90 bp CATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTAGAATTACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HQCQGLGTHTANVVPHQARITEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAATTCT...AGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527052.5
CDS-3UTR CCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTAGCAGCCATGCAGCTTaGGGGACTGGCTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSSSHAA*GTGCRP
Trigger: AGGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCT...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACTTCTCCACATGGCTGTaGAGCCTCCTGACAATGGCT +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHFSTWL*SLLTMA
Trigger: AGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAA...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATGCCAGGAGCCTTCTTGCCCTCTaGGACGGTGTGAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: NLISSHSYWLTKPRSHARSLLAL*DGVKIG
Trigger: GCCGATCTTCACACCGTCCCAGAGGGCAAGAAGGCT...CCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTATACTTCTTGCATGTaGCAGCTTCCAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHYTSCM*QLPKAG
Trigger: CCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATA...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGTGACAAAGAGAAATTCCTaGAAGTCTTGCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: THTANVVPHQAEPPQALVTKRNS*KSCPAA
Trigger: GGCTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGT...CACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGAGGACACGGTCAGGGTaGTCAAGGAGTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMRTRSG*SRSNWK
Trigger: CTTCCAGTTACTCCTTGACCACCCTGACCGTGTCCT...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACAGCAACAGTTCCTGGTaGCATTTGGACACCATCCAT +
Preference number: 4 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHSNSSW*HLDTIH
Trigger: ATGGATGGTGTCCAAATGCCACCAGGAACTGTTGCT...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTAGCAACAGTTCCTGGTaGCATTTGGACACCATCCAT +
Preference number: 4 (lower is better)
Translates to: HQCQGLGTHTANVVPHQASNSSW*HLDTIH
Trigger: ATGGATGGTGTCCAAATGCCACCAGGAACTGTTGCT...AGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGTCTGAGCAAAGCTGGTaGCACATCAGCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMSEQSW*HISTEC
Trigger: GCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGA...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTCCTGGATGCACATCGTaGGCAGGAGCCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFPGCTS*AGAWPL
Trigger: CAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGG...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTGCCTTCTCAGATGTCTaGCACTCAGCCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGAFSDV*HSASRP
Trigger: GGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGC...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGCTGGCGGGATGGAGTaGAAGTGCTTGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLAGGME*KCLRRL
Trigger: CAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGC...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCTCACCCGGTGCAGCTaGCGGGATGGAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRLTRCS*RDGVEV
Trigger: CACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGCTCACCCGGTGCAGCTaGCGGGATGGAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLLTRCS*RDGVEV
Trigger: CACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAG...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHFKARV*CPCSRA
Trigger: AGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAA...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGGGGAATGGCCTGGATaGATGAGTCGAGACATGGGG +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWGEWPG*MSRDMG
Trigger: CCCCATGTCTCGACTCATCCATCCAGGCCATTCCCC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACAGACGGGGAATGGCCTaGATGGATGAGTCGAGACAT +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDRRGMA*MDESRH
Trigger: ATGTCTCGACTCATCCATCCAGGCCATTCCCCGTCT...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACAGACGGGGAATGGCCTaGATGGATGAGTCGAGACAT +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHRRGMA*MDESRH
Trigger: ATGTCTCGACTCATCCATCCAGGCCATTCCCCGTCT...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR CAA 72 bp CTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAGAAAGTGTTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LQSKSLVSLQPS*STSSREKVFPR
Trigger: CCGAGGGAACACTTTCTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCTTTCCTCCTCATCGTaGGAGGCTGAACCACCCTCT +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLLSSSS*EAEPPS
Trigger: AGAGGGTGGTTCAGCCTCTCACGATGAGGAGGAAAG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR TCA 90 bp TCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAATCTCTCAGAACCTTGGGCAGCCGCGATaGGCTTCTGACAGGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SSYGSQGKQKEKAPISQNLGQPR*ASDRPK
Trigger: CTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAG...GTTCTGAGAGATTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTGCCACCCCGGGCTCATaGTGGCGCTTCCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPATPGS*WRFLRY
Trigger: GTACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGC...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTCAAACCGTGCAGGGCTaGGGTCTCTTGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSQTVQG*GLLEQA
Trigger: CGCCTGCTCCAAGAGACCTCAGCCCTGCACGGTTTG...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACTTTGGACACCATCCATaGGAAGACAGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHFGHHP*EDRQVA
Trigger: TGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAA...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCATTTGGACACCATCCATaGGAAGACAGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPFGHHP*EDRQVA
Trigger: TGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAA...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCACTGGAAAGTGATGTaGAGGAATTCCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLHWKVM*RNSRGA
Trigger: GGCGCCCCTGGAATTCCTTCACATCACTTTCCAGTG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGGCACATCAGCACTaGGTGCCAGGTAGAACGCGG +
Preference number: 4 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLVAHQH*VPGRTR
Trigger: CCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCAC...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACGGACAGGGCTCATTTTaGAGAGGCTGCCAACACATG +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHGQGSF*RGCQHM
Trigger: CATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCC...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGGACAGGGCTCATTTTaGAGAGGCTGCCAACACATG +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPGQGSF*RGCQHM
Trigger: CATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYETPLP*QVQHVL
Trigger: GAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACCTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCACAGGCAGAGCGTCTCTaGTCCATCATAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: TSRTFSVYMSSRQSVSAPQAERL*SIIGTE
Trigger: CTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTG...TGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGAGCAAGTGCAGCCGCTaGAGGAGCGTGCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLSKCSR*RSVLLP
Trigger: TGGCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCT...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCAATTCCTGGAAGTCTTaGCCTGCAGCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSNSWKS*PAAHSK
Trigger: CTTGCTGTGGGCTGCAGGGCAAGACTTCCAGGAATT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCATCAGGGCTGACCTGTaGTGCCTGGAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPIRADL*CLELLG
Trigger: GCCCAGCAGCTCCAGGCAGCACAGGTCAGCCCTGAT...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCCACATCAGCACTGAGTaGCAGGTAGAACGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFHISTE*QVERGK
Trigger: TTTGCCGCGTTCTACCTGGCACTCAGTGCTGATGTG...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTCTTCTGCAGCAAAGCTaGCACGCTGCTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPLLQQS*HAAVLS
Trigger: GGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAG...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGAGTGCTTGCGGAGGCTaGGGGCCAGACACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKSACGG*GPDTSG
Trigger: CCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACT...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAACCCGGGCATGGCATaGACGCTCTTGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHNPGMA*TLLASP
Trigger: GGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTT...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILRGRSV*RSPGGG
Trigger: CCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCT...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCCCGCGGCAGTGATGTAGTTATTCCCCAGCCTGAACAGCAATGCCCAGTAACACTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SRGSDVVIPQPEQQCPVTLTTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAG...TGTTACTGGGCATTGCTGTTCAGGCTGGGGAATAACTACATCACTGCCGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529633.5
CDS-3UTR GCA 90 bp CTCTGTATCCGTCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAAAATCTCTCAGAACGCTaGTGGGGCACAGGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCIRPHTVAKVSKRRKLQNLSER*WGTGGP
Trigger: AGGGCCCCCTGTGCCCCAGCAGCGTTCTGAGAGATT...TTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGACGGATACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp GCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGATACCTGAACAGCAATaGCCAGTAACACTCACTACA +
Preference number: 4 (lower is better)
Translates to: APTLPMLFPTRLSHLKLWIPEQQ*PVTLTT
Trigger: TGTAGTGAGTGTTACTGGGCATTGCTGTTCAGGTAT...CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR GCA 90 bp CCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCATAGACACACTCCCATaGAGGGTCCAGGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: PPDLLYQKQWSGQNRAPIIDTLP*RVQGDA
Trigger: GGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTAT...GATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATACGCCAAAAGCCCAGTaGCACAGGACTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: IGNLISSHSYWLTKPRSHTPKAQ*HRTGEP
Trigger: AGGCTCACCAGTCCTGTGCCACTGGGCTTTTGGCGT...ATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGGACTGGCTGTCGGCCTaGGCTTCTTGGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVDWLSA*ASWAAA
Trigger: CGCGGCTGCCCAAGAAGCCCAGGCCGACAGCCAGTC...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTCTGTATCCGTCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAACCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LCIRPHTVAKVSKRRKLQPPDNG*PVTLQV
Trigger: GACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGG...TTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGACGGATACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGCCTCCTGACAATGGCTaGCCGGTGACTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILPPDNG*PVTLQV
Trigger: GACCTGCAGAGTCACCGGCCAGCCATTGTCAGGAGG...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCTTCTCCACATGGCTGTaGAGCCTCCTGACAATGGCT +
Preference number: 4 (lower is better)
Translates to: KAANPFAFTVARSSSLLAFSTWL*SLLTMA
Trigger: AGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAA...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTAGCCTTCTTGCCCTCTaGGACGGTGTGAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFSLLAL*DGVKIG
Trigger: GCCGATCTTCACACCGTCCCAGAGGGCAAGAAGGCT...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATCATAGCATCGTCATTGAGGTaGCCAGGGGTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QDILCVYVLQAERLCSIIASSLR*PGVLKS
Trigger: GCTCTTCAGCACCCCTGGCCACCTCAATGACGATGC...TATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGTCGGTCGGGGAGCAGTaGCGTTCACGATCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILSVGEQ*RSRSVN
Trigger: GTTCACGGATCGTGAACGCCACTGCTCCCCGACCGA...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGAAGGGCTGAGGTCTCTTaGAGCAGGCGGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRRAEVS*SRRMRR
Trigger: CCGCCTCATCCGCCTGCTCCAAGAGACCTCAGCCCT...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTGTTCCTGGTGGCATTTaGACACCATCCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PGDFKARVWCPCSRACQPVPGGI*TPSMRR
Trigger: TCTTCTCATGGATGGTGTCCAAATGCCACCAGGAAC...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTGGCCCCGAAGAAGACTaGGTCCCAGACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSGPEED*VPDLGK
Trigger: CTTCCCAAGGTCTGGGACCCAGTCTTCTTCGGGGCC...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGGGCCCCGAAGAAGACTaGGTCCCAGACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILGPEED*VPDLGK
Trigger: CTTCCCAAGGTCTGGGACCCAGTCTTCTTCGGGGCC...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGTGTCTGAGCAAAGCTaGTGGCACATCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPVSEQS*WHISTE
Trigger: CTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACAC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTCCTGGATGCACATCGTaGGCAGGAGCCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSPGCTS*AGAWPL
Trigger: CAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGG...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGCCTGGATGCACATCGTaGGCAGGAGCCTGGCCATTG +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILPGCTS*AGAWPL
Trigger: CAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGG...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGAGCTGGCGGGATGGAGTaGAAGTGCTTGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRAGGME*KCLRRL
Trigger: CAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGC...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCCCTCGGCCAGCACTTaGGCTCCCGCGGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVPSAST*APAAVM
Trigger: CATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHARLPG*CHSFQG
Trigger: CCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGC...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSFKARV*CPCSRA
Trigger: AGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAA...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ACCTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCAGGTTACTTGTGTGTCTaGCTGCTTGGGAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TSRTFSVYMSSRQSVSAPGYLCV*LLGREG
Trigger: ACCCTCTCTCCCAAGCAGCCAGACACACAAGTAACC...TGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGTGCAGCCTTTTAGGCTaGGTACGGGGAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRCSLLG*VRGGSC
Trigger: GCAGGAGCCTCCCCGTACCCAGCCTAAAAGGCTGCA...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGTGCAGCCTTTTAGGCTaGGTACGGGGAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILCSLLG*VRGGSC
Trigger: GCAGGAGCCTCCCCGTACCCAGCCTAAAAGGCTGCA...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGTCTGTTAAAGACTCCTaGAGCCACTTTGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: SISAKAWAPTLPMLFPTRSVKDS*SHFEGI
Trigger: GATTCCCTCAAAGTGGCTCCAGGAGTCTTTAACAGA...CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR TCA 90 bp GGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAACTCATCGTGAGAGGCTaGACCACCCTCTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRCEDRQPDFITFILADELIVRG*TTLFPH
Trigger: ATGGGGGAAGAGGGTGGTTCAGCCTCTCACGATGAG...TTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTA +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLAAMSF*QAQVPL
Trigger: TAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGC...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTA +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILAAMSF*QAQVPL
Trigger: TAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGC...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCTGCGGATGTACTTCCTaGGGAACGCCGACACAGCGG +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPCGCTS*GTPTQR
Trigger: CCGCTGTGTCGGCGTTCCTCAGGAAGTACATCCGCA...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCAAACCGTGCAGGGCTaGGGTCTCTTGGAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPQTVQG*GLLEQA
Trigger: CGCCTGCTCCAAGAGACCTCAGCCCTGCACGGTTTG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTACTGGAGCTGCTGGGCTaGGAACACGTAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: CHTTESARRKTFQGSRILLELLG*EHVAAH
Trigger: ATGTGCTGCTACGTGTTCTCAGCCCAGCAGCTCCAG...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATCACTGGAAAGTGATGTaGAGGAATTCCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYHWKVM*RNSRGA
Trigger: GGCGCCCCTGGAATTCCTTCACATCACTTTCCAGTG...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCCAGGAAGGCTGCTGTaGTCTGAAGGTTGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRPGRLL*SEGCAA
Trigger: AGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHGLPRQ*CSYSPA
Trigger: GGCTGGGGAATAACTACATCACTGCCGCGGGAGCCC...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACTGTTCCCCACCAGGCTaGGCCACCTCAAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHCSPPG*ATSSSG
Trigger: ACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACA...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACTGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTAAGGGGTCTTTTGTaGGAGGCCGGGCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRAVRGLL*EAGPLH
Trigger: GTGGAGAGGCCCGGCCTCTCACAAAAGACCCCTTAC...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGCCACTGGAAGCCAGGATCTAAGGTAGTTCTCTCAGGCCAAGGAGTTCTCCTCCTGAGGGAATGTTCATaGATCAAATATCCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GHWKPGSKVVLSGQGVLLLRECS*IKYPLG
Trigger: GCCCAGGGGATATTTGATTCATGAACATTCCCTCAG...GAGGAGAACTCCTTGGCCTGAGAGAACTACCTTAGATCCTGGCTTCCAGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCAGCTGGCTCCTCTGTaGCTGAAAAGCCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRQLAPL*LKSLLR
Trigger: TCGCAGGAGGCTTTTCAGGCACAGAGGAGCCAGCTG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILETPLP*QVQHVL
Trigger: GAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGATCAAGCAGCCTTCTTaGCCTCTGGGACGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLIKQPS*PLGRCE
Trigger: TTCACACCGTCCCAGAGGGCAAGAAGGCTGCTTGAT...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGCAGGCAGAGCGTCTCTaGTCCATCATAGGTACTGAG +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWQAERL*SIIGTE
Trigger: CTCAGTACCTATGATGGAGCAGAGACGCTCTGCCTG...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGCAAGTGCAGCCGCTaGAGGAGCGTGCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHSKCSR*RSVLLP
Trigger: TGGCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCT...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGTCAGGCCAACAGCAGTaGTCAAAGAGTAGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWSGQQQ*SKSRVR
Trigger: GCGGACTCTACTCTTTGAGCACTGCTGTTGGCCTGA...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGGGCTGGTCACCACCTTaGGGGCATTCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRGWSPP*GHSSAG
Trigger: ACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCC...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCTGGTCACCACCTTaGGGGCATTCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLGWSPP*GHSSAG
Trigger: ACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCC...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCCCACAGAGCCAGTCTaGCCAGGTGCAGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVPTEPV*PGAGGW
Trigger: CCACCCTCCTGCACCTGGGCAGACTGGCTCTGTGGG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTATCAGGGCTGACCTGTaGTGCCTGGAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPIRADL*CLELLG
Trigger: GCCCAGCAGCTCCAGGCAGCACAGGTCAGCCCTGAT...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCTTCTGCAGCAAAGCTaGCACGCTGCTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGLLQQS*HAAVLS
Trigger: GGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAG...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCACTTCTGCAGCAAAGCTaGCACGCTGCTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMALLQQS*HAAVLS
Trigger: GGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAG...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACAATGTCAACTTGAGGTaGCCAACATTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDNVNLR*PTFRPR
Trigger: ACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATT...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGCAAATACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSANTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTATTTGC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000647318.2
CDS-3UTR GCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCATTCCCCAGCCTCAATaGCAAGAAGTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSIPQPQ*QEVLPA
Trigger: TGCAGGCAGAACTTCTTGGCATTGAGGCTGGGGAAT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGCGTCACCCACTCTGTTaGCCCAGAATCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: NPIQCYANGLLCVLLSERRHPLC*PRIPGT
Trigger: AGTTCCTGGGATTCTGGGGCAACAGAGTGGGTGACG...CCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATCTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYLGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCT +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYRVWCP*SRACQP
Trigger: AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACCTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCAGAGTTCTCCTCCTTGTaGCCACATCTAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSRTFSVYMSSRQSVSAPEFSSL*PHLSRG
Trigger: TCCTCTGCTTAGATGTGGGCACAAGGAGGAGAACTC...TGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGACGCCAAAAGCCCAGTaGCACAGGACTGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILTPKAQ*HRTGEP
Trigger: AGGCTCACCAGTCCTGTGCCACTGGGCTTTTGGCGT...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATTCGGCCTGGGCTTCTTaGGCAGCCGCGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHSAWAS*AAAMSF
Trigger: GAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGA...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACTATACTTCTTGCATGTaGCAGCTTCCAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDYTSCM*QLPKAG
Trigger: CCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATA...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGCTTGGCCATATACTTCTTGCATGTGGCAGCTTCCAAAGGCAGGGCCAATGGGCCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: SLAIYFLHVAASKGRANGPWSSA*PYTSCM
Trigger: CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGG...CCCATTGGCCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTCCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCPWSSA*PYTSCM
Trigger: CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGG...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGCTGCCGGCAGCTGAATaGGAAGACAAAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMLPAAE*EDKEKF
Trigger: GAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAG...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATAGTCCGCACAGAGAGTaGTTTGGCCATGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYSPHRE*FGHALQ
Trigger: CTGCAGTGCATGGCCAAACCACTCTCTGTGCGGACT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGTTGAAGAGCAGGGTCTaGACAGAGGTGGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILLKSRV*TEVGSV
Trigger: GACCGACCCCACCTCTGTCCAGACCCTGCTCTTCAA...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTGCTGGGTGACCACCTGATCCCTTGCTTATTAAACGCAGCTAAGCACTATTTTAGGGCTGAGGTCTCTTaGAGCAGGCGGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LLGDHLIPCLLNAAKHYFRAEVS*SRRMRR
Trigger: CCGCCTCATCCGCCTGCTCCAAGAGACCTCAGCCCT...AAAATAGTGCTTAGCTGCGTTTAATAAGCAAGGGATCAGGTGGTCACCCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ACTATTTTAACACAAGGCCTGCATGAGAGGCTGCTCGCTGTGGAGAGCCAGCCATGCAGCAACAGTTCCTaGTGGCATTTGGACACCATC +
Preference number: 4 (lower is better)
Translates to: TILTQGLHERLLAVESQPCSNSS*WHLDTI
Trigger: GATGGTGTCCAAATGCCACCAGGAACTGTTGCTGCA...TGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTTGCAGCAACAGTTCCTaGTGGCATTTGGACACCATC +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCCSNSS*WHLDTI
Trigger: GATGGTGTCCAAATGCCACCAGGAACTGTTGCTGCA...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCCAGGTGCAGGAGGGTaGGGAGGCGGCCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFPGAGG*GGGPEE
Trigger: TTCTTCGGGGCCGCCTCCCCACCCTCCTGCACCTGG...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACCTGACCTGTGCTGCCTaGAGCTGCTGGGCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHLTCAA*SCWAEN
Trigger: GTTCTCAGCCCAGCAGCTCCAGGCAGCACAGGTCAG...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACTCGTGGGCAGGAGCCTaGCCATTGGTGAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHSWAGA*PLVSCL
Trigger: CAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGA...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCTCACCCGGTGCAGCTaGCGGGATGGAGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPLTRCS*RDGVEV
Trigger: CACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGATCAGTGCCAAGGCTTaGGCACCCACACTGCCAATG +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKISAKA*APTLPM
Trigger: CATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPARLPG*CHSFQG
Trigger: CCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPFKARV*CPCSRA
Trigger: AGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAA...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGGCGAAGCTGGGCCCAGACTTCTAGAGCCCAGCTCGGTGCTCCCACACTTAGCCCAGTCAATAAAGTGTaGCTGTCATCATCACATATT +
Preference number: 4 (lower is better)
Translates to: RRSWAQTSRAQLGAPTLSPVNKV*LSSSHI
Trigger: AATATGTGATGATGACAGCCACACTTTATTGACTGG...GCTAAGTGTGGGAGCACCGAGCTGGGCTCTAGAAGTCTGGGCCCAGCTTCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR CCA 90 bp CCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCCCATGTTGGTCAGGTTaGTCTCAAACCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: PPDLLYQKQWSGQNRAPIPCWSG*SQTPNL
Trigger: GAGGTTGGGGGTTTGAGACCAACCTGACCAACATGG...GATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGAGCCGCGATGAGCTTCTaGCAGGCCCAAGTACCCTTA +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRAAMSF*QAQVPL
Trigger: TAAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGC...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCACACATTCATACTGGCTaGCGAAACCCCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPHIHTG*RNPAPM
Trigger: CATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTG...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGCACATTCATACTGGCTaGCGAAACCCCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILHIHTG*RNPAPM
Trigger: CATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTG...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGGACTGGTAATTCCTaGACATGTTGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMGTGNS*TCCRRK
Trigger: CTTCCTTCTACAACATGTTCAGGAATTACCAGTCCC...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTTTTGGACACCATCCATaGGAAGACAGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFFGHHP*EDRQVA
Trigger: TGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAA...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCACACTGGAAAGTGATGTaGAGGAATTCCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPHWKVM*RNSRGA
Trigger: GGCGCCCCTGGAATTCCTTCACATCACTTTCCAGTG...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAAGAAGCACTGGAAAGTaGTGTGAAGGAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPRSTGK*CEGIPG
Trigger: CCCTGGAATTCCTTCACATCACTTTCCAGTGCTTCT...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCAGAAGCACTGGAAAGTaGTGTGAAGGAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFRSTGK*CEGIPG
Trigger: CCCTGGAATTCCTTCACATCACTTTCCAGTGCTTCT...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCAGAAGCACTGGAAAGTaGTGTGAAGGAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSRSTGK*CEGIPG
Trigger: CCCTGGAATTCCTTCACATCACTTTCCAGTGCTTCT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAAGGCTGCTGTGATCTaGAGGTTGTGCGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHKAAVI*RLCGSA
Trigger: GGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCCCAGGAAGGCTGCTGTaGTCTGAAGGTTGTGCGGCT +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPPGRLL*SEGCAA
Trigger: AGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGG...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCACACCTCAAGCTCTGGTaGTCACCCAAGGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRAHLKLW*SPKASA
Trigger: GGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTG...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCTGCCCCTAGGTAGGTaGTGCAGTTATTGGACAACT +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLLPLGR*CSYWTT
Trigger: AGTTGTCCAATAACTGCATCACCTACCTAGGGGCAG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGGAAAGCTGCTTCCTaGATTATGTGTTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMGKAAS*IMCSVY
Trigger: GTACACAGAACACATAATTCAGGAAGCAGCTTTCCC...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGTAAACCTTCTCCATCCTTCTGTATAAAAGTCCACATGTaGTCCCAGCTGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: EAARCGEPAISKPSPSFCIKVHM*SQLECG
Trigger: ACCACACTCCAGCTGGGATCACATGTGGACTTTTAT...ACAGAAGGATGGAGAAGGTTTACTTATGGCTGGCTCTCCACAGCGAGCAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDAFWHK*NGTASC
Trigger: ACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAAGGATGAAAGAAGGCTaGGGATCAAGCTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GRCEDRQPDFITFILADERMKEG*GSSWDG
Trigger: CCCGTCCCAGCTTGATCCTCAGCCTTCTTTCATCCT...TTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp CCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCAGGCTCCTGCACAGCTaGAAACTTCACGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: PPDLLYQKQWSGQNRAPIRLLHS*KLHGVK
Trigger: TTTAACCCCGTGAAGTTTTCAGCTGTGCAGGAGCCT...GATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGAAACACAAGGCCTGCATaGGAGGCTGCTCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRNTRPA*EAARCG
Trigger: TCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTT...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACCAGCTGGCTCCTCTGTaGCTGAAAAGCCTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHQLAPL*LKSLLR
Trigger: TCGCAGGAGGCTTTTCAGGCACAGAGGAGCCAGCTG...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACGAAACCCCGCTCCCATaGCAGGTCCAGCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHETPLP*QVQHVL
Trigger: GAGAACATGCTGGACCTGGCATGGGAGCGGGGTTTC...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTTCAGCAGGTTGCCCTaGAGAAGGTTGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKFSRLP*RRLKSR
Trigger: CCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAA...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTGCGGCTCGGCCTTCTaGAGCAAAGCTGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVCGSAF*SKAATL
Trigger: CAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCA...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCTTGGCCTCACCCGGTaGAGCTGGCGGGATGGAGTG +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFLGLTR*SWRDGV
Trigger: CACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAG...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAGGCAAGGCAGCAGCTaGTCCACGCCAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHRQGSS*STPMSP
Trigger: GGGTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACAATGCCAAGAAGTTCTaGCTGCATGCAAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHNAKKF*LHARSL
Trigger: TAAGCTCCTTGCATGCAGGCAGAACTTCTTGGCATT...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGCAGAATCCCAGGAACTaGAAGGAGGTGTTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLQNPRN*KEVLPR
Trigger: CCGAGGCAACACCTCCTTGCAGTTCCTGGGATTCTG...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCT +
Preference number: 4 (lower is better)
Translates to: DKLTTQYSAMQMGCCVYSRVWCP*SRACQP
Trigger: AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCT...GGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATCATAACTTGTGTGTCTGGCTaGTTGGGAGAGAGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: QDILCVYVLQAERLCSIITCVSG*LGERVY
Trigger: GTACACCCTCTCTCCCAAGCAGCCAGACACACAAGT...TATGATGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACCCTTTTCACATGTGTTaGAGCCTTTTAGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: HFEEAANTCHPASGAQTHPFHMC*SLLGWV
Trigger: TACCCAGCCTAAAAGGCTGCAACACATGTGAAAAGG...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTATAGACACACTCCCATaGAGGGTCCAGGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSIDTLP*RVQGDA
Trigger: GGCATCTCCCTGGACCCTGCATGGGAGTGTGTCTAT...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGAGCAGCCATGCAGCTTaGGGGACTGGCTGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVSSHAA*GTGCRP
Trigger: AGGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCT...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTCTGCAGGTCTCGGGCTaGGTGGAGCGAGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSLQVSG*VERVGV
Trigger: GACCCCCACTCGCTCCACCCAGCCCGAGACCTGCAG...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGATCATCACATTCATACTaGCTGACGAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLSERRLNTTFLLICCIRSSHSY*LTKPRS
Trigger: GGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGA...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCTCATCACATTCATACTaGCTGACGAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PPDLLYQKQWSGQNRAPISSHSY*LTKPRS
Trigger: GGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGA...GATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAAGCCTTCTTGCCCTCTaGGACGGTGTGAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKSLLAL*DGVKIG
Trigger: GCCGATCTTCACACCGTCCCAGAGGGCAAGAAGGCT...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ACCTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCATATACTTCTTGCATGTaGCAGCTTCCAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSRTFSVYMSSRQSVSAPYTSCM*QLPKAG
Trigger: CCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATA...TGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACGCATCGTCATTGAGGTaGCCAGGGGTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GTASCGSISEVCCQSSVHASSLR*PGVLKS
Trigger: GCTCTTCAGCACCCCTGGCCACCTCAATGACGATGC...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATTCGGTCGGGGAGCAGTaGCGTTCACGATCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHSVGEQ*RSRSVN
Trigger: GTTCACGGATCGTGAACGCCACTGCTCCCCGACCGA...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCAGCAACAGTTCCTGGTaGCATTTGGACACCATCCAT +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSSNSSW*HLDTIH
Trigger: ATGGATGGTGTCCAAATGCCACCAGGAACTGTTGCT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATGCAGCAACAGTTCCTaGTGGCATTTGGACACCATC +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTCSNSS*WHLDTI
Trigger: GATGGTGTCCAAATGCCACCAGGAACTGTTGCTGCA...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTGGCCCCGAAGAAGACTaGGTCCCAGACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPGPEED*VPDLGK
Trigger: CTTCCCAAGGTCTGGGACCCAGTCTTCTTCGGGGCC...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATGCCTTCTCAGATGTCTaGCACTCAGCCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHAFSDV*HSASRP
Trigger: GGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGC...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACACATACACCTTCATCCTaGAGATGGTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTHTPSS*RWFSSR
Trigger: CCTGGAGGAGAACCATCTCCAGGATGAAGGTGTATG...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTTTCAAAGCAAGAGTCTaGTGTCCCTGCAGCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFFKARV*CPCSRA
Trigger: AGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAA...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGACCAGAGACGGGGAATaGCCTGGATGGATGAGTCGA +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRTRDGE*PGWMSR
Trigger: TCGACTCATCCATCCAGGCCATTCCCCGTCTCTGGT...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGACATGTGATCCCAGCTaGAGTGTGGTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRTCDPS*SVVIFF
Trigger: GAAAAATATGACCACACTCCAGCTGGGATCACATGT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATGCCAGGAGTGGTTCTCAGCTGTaGAAACACCAGCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: NLISSHSYWLTKPRSHARSGSQL*KHQPRM
Trigger: CATCCTTGGCTGGTGTTTCCACAGCTGAGAACCACT...CCTGGCATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAGGGTTTCTCCATGTTaGTCAGGTTGGTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHRVSPC*SGWSQT
Trigger: GGTTTGAGACCAACCTGACCAACATGGAGAAACCCT...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCTCAGAAACAATGGTCTaGGCAGAACAGGGCACCAAT +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSSETMV*AEQGTN
Trigger: ATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGA...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CAA 72 bp AGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAATCTTGGGAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RGQSHTMEEGLS*YILGLNLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCTCATCGTGAGAGGCTaGACCACCCTCTTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHLIVRG*TTLFPH
Trigger: ATGGGGGAAGAGGGTGGTTCAGCCTCTCACGATGAG...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR TCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRLHHRY*GSETEQ
Trigger: CTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAG...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCTCCATCATAGGTACTaGGGAAGCGAGACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRLHHRY*GSETEQ
Trigger: CTGCTCAGTCTCGCTTCCTCAGTACCTATGATGGAG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATGGAAGATGTCTTCTTaGCCAACATCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTWKMSS*PTSGQQ
Trigger: CTGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCA...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGTTTGGACACCATCCATaGGAAGACAGGCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRFGHHP*EDRQVA
Trigger: TGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAA...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCACACTGGAAAGTGATGTaGAGGAATTCCAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRAHWKVM*RNSRGA
Trigger: GGCGCCCCTGGAATTCCTTCACATCACTTTCCAGTG...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCATGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMACSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTATCCTGGAGGGCACTaGTGCTCCCTCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVYPGGH*CSLLCQ
Trigger: CTGGCAGAGGAGGGAGCATCAGTGCCCTCCAGGATA...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGATAAAAGTCCACATGTaGTCCCAGCTGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWIKVHM*SQLECG
Trigger: ACCACACTCCAGCTGGGATCACATGTGGACTTTTAT...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGATCAAGCAGCCTTCTTaGCCTCTGGGACGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRIKQPS*PLGRCE
Trigger: TTCACACCGTCCCAGAGGGCAAGAAGGCTGCTTGAT...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGATCAAGCAGCCTTCTTaGCCTCTGGGACGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILIKQPS*PLGRCE
Trigger: TTCACACCGTCCCAGAGGGCAAGAAGGCTGCTTGAT...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAGGCAGCCAATCCATTCGCTTTCACCGTGGCAAGATCAAGCAGCCTTCTTGCCTGGCCATATACTTCTTaGATGTGGCAGCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KAANPFAFTVARSSSLLAWPYTS*MWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCA...GGCAAGAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATGGATTGGCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR GCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATTGGCCATATACTTCTTaGATGTGGCAGCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNWPYTS*MWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCA...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGAGCAAGTGCAGCCGCTaGAGGAGCGTGCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKSKCSR*RSVLLP
Trigger: TGGCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCT...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTGCAGCCCACAGCAAGTaGAGCCGCTGCAGGAGCGTG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSAAHSK*SRCRSV
Trigger: CACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGC...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGGCCATGCACTGCAGCTaGCGGCAGCTGAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKAMHCS*RQLNGK
Trigger: CTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGC...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCATTCAGCAGGTTGCCCTaGAGAAGGTTGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPFSRLP*RRLKSR
Trigger: CCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAA...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTCTTAGCCATGGAGTGTaGACAGCCGTCAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPLSHGV*TAVSQF
Trigger: AAATTGACTGACGGCTGTGCACACTCCATGGCTAAG...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR GCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGCTTAGCCATGGAGTGTaGACAGCCGTCAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWLSHGV*TAVSQF
Trigger: AAATTGACTGACGGCTGTGCACACTCCATGGCTAAG...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAATTCCCCAGCCTCAATaGCAAGAAGTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAIPQPQ*QEVLPA
Trigger: TGCAGGCAGAACTTCTTGGCATTGAGGCTGGGGAAT...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTCAGAATCCCAGGAACTaGAAGGAGGTGTTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSQNPRN*KEVLPR
Trigger: CCGAGGCAACACCTCCTTGCAGTTCCTGGGATTCTG...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCACTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRALGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGAGAGGAAGGAGCGTGTaGAGGAGTCCAGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVRGRSV*RSPGGG
Trigger: CCCTCCTCCTGGACTCCTGCACACGCTCCTTCCTCT...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGACCACCTGATCCCTTaGTTATTAAACGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPDHLIP*LLNAAK
Trigger: CTTAGCTGCGTTTAATAAGCAAGGGATCAGGTGGTC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAGCCTTCTTGCCCTCTaGGACGGTGTGAAGATCGGC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHSLLAL*DGVKIG
Trigger: GCCGATCTTCACACCGTCCCAGAGGGCAAGAAGGCT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCACCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAPWSSA*PYTSCM
Trigger: CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGG...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTGCTGGGTGACCACCTGATCCCTTGCTTATTAAACGCAGCTAAGCACTATTTTTTGAAGAGCAGGGTCTaGACAGAGGTGGGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: LLGDHLIPCLLNAAKHYFLKSRV*TEVGSV
Trigger: GACCGACCCCACCTCTGTCCAGACCCTGCTCTTCAA...AAAATAGTGCTTAGCTGCGTTTAATAAGCAAGGGATCAGGTGGTCACCCAGCAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTAGTGTCTGAGCAAAGCTaGTGGCACATCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: CHTTESARRKTFQGSRILVSEQS*WHISTE
Trigger: CTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACAC...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGTGTCTGAGCAAAGCTaGTGGCACATCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLVSEQS*WHISTE
Trigger: CTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACAC...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAARLPG*CHSFQG
Trigger: CCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGGGGAAAAGTCTATCCTaGAGGGCACTGATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILGKSLS*RALMLP
Trigger: AGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCC...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCGCCAGTCCCATACTATaGAGGAGGGGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPASPIL*RRGCPC
Trigger: ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGC...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGAGACGGGGAATGGCCTaGATGGATGAGTCGAGACAT +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRRRGMA*MDESRH
Trigger: ATGTCTCGACTCATCCATCCAGGCCATTCCCCGTCT...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAACCAGAGACGGGGAATaGCCTGGATGGATGAGTCGA +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRATRDGE*PGWMSR
Trigger: TCGACTCATCCATCCAGGCCATTCCCCGTCTCTGGT...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTACCAGAGACGGGGAATaGCCTGGATGGATGAGTCGA +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSTRDGE*PGWMSR
Trigger: TCGACTCATCCATCCAGGCCATTCCCCGTCTCTGGT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VFCERPGLSTKRHSVNKHKPRMS*GTNGCH
Trigger: GTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTT...GTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QPPLERKCSLGARLPGWCKPRMS*GTNGCH
Trigger: GTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTT...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCTGAGGAAGCGAGACTaGGCAGACACCGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFLRKRD*ADTVVL
Trigger: GAGGACCACGGTGTCTGCTCAGTCTCGCTTCCTCAG...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCTGGAGCTGCTGGGCTaGGAACACGTAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVLELLG*EHVAAH
Trigger: ATGTGCTGCTACGTGTTCTCAGCCCAGCAGCTCCAG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAAATGTCATCAGGGCTaGCCTGTGCTGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPKCHQG*PVLPGA
Trigger: AGCTCCAGGCAGCACAGGTCAGCCCTGATGACATTT...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAA +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSADASV*DIVIAQ
Trigger: TTGCGCGATAACAATATCTCAGACCGAGGCATCTGC...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTGCAATTGCTCGCAGTaGAGAGCACATTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKCNCSQ*RAHSMS
Trigger: GCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCA...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATTGCAATTGCTCGCAGTaGAGAGCACATTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYCNCSQ*RAHSMS
Trigger: GCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCA...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGCTGCCCCTAGGTAGGTaGTGCAGTTATTGGACAACT +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILLPLGR*CSYWTT
Trigger: AGTTGTCCAATAACTGCATCACCTACCTAGGGGCAG...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCATGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGTGCTCACAAACAAACTaGGACGAACATCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLCSQTN*DEHPPG
Trigger: TCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCA...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTAATGGCCTGGATGGATaGGTCGAGACATGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSNGLDG*VETWGK
Trigger: CTTTCCCCATGTCTCGACTCATCCATCCAGGCCATT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWAFWHK*NGTASC
Trigger: ACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGC...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACAGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTAFWHK*NGTASC
Trigger: ACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGC...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTCTGTATCCGTCCTCATACGGTAGCCAAGGTAAGCAAAAGGAGAAAGCTCCAAGGGAAACTGAGGCAATaGGGTTACTTGTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LCIRPHTVAKVSKRRKLQGKLRQ*GYLCVW
Trigger: CCAGACACACAAGTAACCTCATTGCCTCAGTTTCCC...TTGGAGCTTTCTCCTTTTGCTTACCTTGGCTACCGTATGAGGACGGATACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR TCA 90 bp GACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGATATACATTATCGGGTTaGAAACATCATTTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: DEHPPGDFKARVWCPCSRYTLSG*KHHFPP
Trigger: CGGAGGAAAATGATGTTTTCAACCCGATAATGTATA...TCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTATCAAGCAGCCTTCTTaGCCTCTGGGACGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSIKQPS*PLGRCE
Trigger: TTCACACCGTCCCAGAGGGCAAGAAGGCTGCTTGAT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAAATTCCTGGAAGTCTTaGCCTGCAGCCCACAGCAAG +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRANSWKS*PAAHSK
Trigger: CTTGCTGTGGGCTGCAGGGCAAGACTTCCAGGAATT...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAATCAGGCCAACAGCAGTaGTCAAAGAGTAGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKSGQQQ*SKSRVR
Trigger: GCGGACTCTACTCTTTGAGCACTGCTGTTGGCCTGA...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTATCAGGGCTGACCTGTaGTGCCTGGAGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSIRADL*CLELLG
Trigger: GCCCAGCAGCTCCAGGCAGCACAGGTCAGCCCTGAT...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCCACATCAGCACTGAGTaGCAGGTAGAACGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPHISTE*QVERGK
Trigger: TTTGCCGCGTTCTACCTGGCACTCAGTGCTGATGTG...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCCCTGCCAGGAAGGCTaGTGTGATCTGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPPCQEG*CDLKVV
Trigger: CACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGGCCGCCGGAGGTGCTaGAGCACAAAGGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKGRRRC*STKARA
Trigger: TGCCCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAACGGGCCGCCGGAGGTaGTGCAGCACAAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKTGRRR*CSTKAR
Trigger: CCTGGCCTTTGTGCTGCAGCACCTCCGGCGGCCCGT...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGGAAGTTCTGCCTGCATaGAAGGAGCTTAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVREVLPA*KELSHG
Trigger: TCCATGGCTAAGCTCCTTGCATGCAGGCAGAACTTC...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGGAAGTTCTGCCTGCATaGAAGGAGCTTAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILEVLPA*KELSHG
Trigger: TCCATGGCTAAGCTCCTTGCATGCAGGCAGAACTTC...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAATTCCCCAGCCTCAATaGCAAGAAGTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPIPQPQ*QEVLPA
Trigger: TGCAGGCAGAACTTCTTGGCATTGAGGCTGGGGAAT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCAGAATCCCAGGAACTaGAAGGAGGTGTTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPQNPRN*KEVLPR
Trigger: CCGAGGCAACACCTCCTTGCAGTTCCTGGGATTCTG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGCAAATGAAATGGAACTaGCTCTTGTGGGTCTATTTC +
Preference number: 4 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMQMKWN*LLWVYF
Trigger: GAAATAGACCCACAAGAGGCAGTTCCATTTCATTTG...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCCTTTTCACATGTGTTaGAGCCTTTTAGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLPFHMC*SLLGWV
Trigger: TACCCAGCCTAAAAGGCTGCAACACATGTGAAAAGG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGTCATCACATTCATACTaGCTGACGAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRSSHSY*LTKPRS
Trigger: GGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGA...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTACATTCGCTTTCACCGTaGCAAGATCAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CHTTESARRKTFQGSRILHSLSP*QDQAAF
Trigger: GAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATG...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGCATTCGCTTTCACCGTaGCAAGATCAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLHSLSP*QDQAAF
Trigger: GAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATG...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCATTCGCTTTCACCGTaGCAAGATCAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRHSLSP*QDQAAF
Trigger: GAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGCCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLPWSSA*PYTSCM
Trigger: CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGG...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATCTGCCGGCAGCTGAATaGGAAGACAAAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYLPAAE*EDKEKF
Trigger: GAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAG...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATGTTCCTGGTGGCATTTaGACACCATCCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: GMAWMDESRHGESCFLNYVPGGI*TPSMRR
Trigger: TCTTCTCATGGATGGTGTCCAAATGCCACCAGGAAC...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCTGGCACGACACCTTTaGCACGCACCAGGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVLARHL*HAPGSQ
Trigger: TTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CATCCTCCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTAATAAAGGTGACCTATaGTGTTCCCAGAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: HPPGDFKARVWCPCSRACNKGDL*CSQKTS
Trigger: ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATT...ACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWKPRMS*GTNGCH
Trigger: GTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTT...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCACATGTGATCCCAGCTaGAGTGTGGTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSTCDPS*SVVIFF
Trigger: GAAAAATATGACCACACTCCAGCTGGGATCACATGT...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGATGGAACTGCCTCTTGTaGGTCTATTTCAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSERRLNTTFLLICCIRWNCLL*VYFRSL
Trigger: CAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCA...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGACAGTGCTATGCAAATaGGCTGCTGTGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKTVLCK*AAVCTP
Trigger: AGGAGTACACACAGCAGCCCATTTGCATAGCACTGT...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAGGGACTGGTAATTCCTaGACATGTTGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAGTGNS*TCCRRK
Trigger: CTTCCTTCTACAACATGTTCAGGAATTACCAGTCCC...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCTGGAGCTGCTGGGCTaGGAACACGTAGCAGCACAT +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFLELLG*EHVAAH
Trigger: ATGTGCTGCTACGTGTTCTCAGCCCAGCAGCTCCAG...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAAGAAGCACTGGAAAGTaGTGTGAAGGAATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPRSTGK*CEGIPG
Trigger: CCCTGGAATTCCTTCACATCACTTTCCAGTGCTTCT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTATGGGGGTGCTGTAAGTaGAATATCAAAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CHTTESARRKTFQGSRILWGCCK*NIKAEV
Trigger: GACCTCAGCTTTGATATTTCACTTACAGCACCCCCA...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATTCAGGCCAACAGCAGTaGTCAAAGAGTAGAGTCCGC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHSGQQQ*SKSRVR
Trigger: GCGGACTCTACTCTTTGAGCACTGCTGTTGGCCTGA...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTTTCAGCAGGTTGCCCTaGAGAAGGTTGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPFSRLP*RRLKSR
Trigger: CCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAA...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTAATGTCAACTTGAGGTaGCCAACATTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSNVNLR*PTFRPR
Trigger: ACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATT...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCACTTAGCCATGGAGTGTaGACAGCCGTCAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPLSHGV*TAVSQF
Trigger: AAATTGACTGACGGCTGTGCACACTCCATGGCTAAG...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGCGTCACCCACTCTGTTaGCCCAGAATCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKRHPLC*PRIPGT
Trigger: AGTTCCTGGGATTCTGGGGCAACAGAGTGGGTGACG...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCTTTGCCAGCATCAGTaGCAAGGCTTGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFLCQHQ*QGLGTH
Trigger: GTGGGTGCCCAAGCCTTGGCACTGATGCTGGCAAAG...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGAACAACTACAGAGCCTTaGAGACACCAAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRTTTEP*RHQGKA
Trigger: TGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTTGT...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641284.1
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTGCTATGCAAATGGGCTaGTGTGTGTACTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPAMQMG*CVYSSA
Trigger: CGCTGAGGAGTACACACAGCAGCCCATTTGCATAGC...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCACCCAATACAGTGCTATaGAAATGGGCTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPPNTVL*KWAAVC
Trigger: ACACACAGCAGCCCATTTGCATAGCACTGTATTGGG...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCTCATCACATTCATACTaGCTGACGAAACCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPSSHSY*LTKPRS
Trigger: GGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGA...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCACCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRAPWSSA*PYTSCM
Trigger: CATGCAAGAAGTATATGGCCAAGCTGAGGACCACGG...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAACAAAGAGAAATTCCTaGAAGTCTTGCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPTKRNS*KSCPAA
Trigger: GGCTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGACAAAGAGAAATTCCTaGAAGTCTTGCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILTKRNS*KSCPAA
Trigger: GGCTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGT...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGACAAAGAGAAATTCCTaGAAGTCTTGCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRTKRNS*KSCPAA
Trigger: GGCTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGT...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCTGCCGGCAGCTGAATaGGAAGACAAAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRLPAAE*EDKEKF
Trigger: GAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAG...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTGTGTCTGAGCAAAGCTaGTGGCACATCAGCACTGAG +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPVSEQS*WHISTE
Trigger: CTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACAC...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTTCGTGGGCAGGAGCCTaGCCATTGGTGAGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSSWAGA*PLVSCL
Trigger: CAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGA...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCCATACACCTTCATCCTaGAGATGGTTCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPHTPSS*RWFSSR
Trigger: CCTGGAGGAGAACCATCTCCAGGATGAAGGTGTATG...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTGGGAAAAGTCTATCCTaGAGGGCACTGATGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPGKSLS*RALMLP
Trigger: AGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCC...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTACCCACACGGAAGCCTaGGAGGATCAGCAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSTHTEA*EDQQRP
Trigger: TGGCCTCTGCTGATCCTCCCAGGCTTCCGTGTGGGT...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNIPAGV*SYFSCK
Trigger: TTTGCAAGAAAAATATGACCACACTCCAGCTGGGAT...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGAGGGTTTCTCCATGTTaGTCAGGTTGGTCTCAAACC +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRRVSPC*SGWSQT
Trigger: GGTTTGAGACCAACCTGACCAACATGGAGAAACCCT...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGGGGACTGGTAATTCCTaGACATGTTGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILGTGNS*TCCRRK
Trigger: CTTCCTTCTACAACATGTTCAGGAATTACCAGTCCC...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTGGAAGATGTCTTCTTaGCCAACATCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSWKMSS*PTSGQQ
Trigger: CTGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCA...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGAATGGCCTGGATGGATaGGTCGAGACATGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVNGLDG*VETWGK
Trigger: CTTTCCCCATGTCTCGACTCATCCATCCAGGCCATT...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCATAAAAGTCCACATGTaGTCCCAGCTGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPIKVHM*SQLECG
Trigger: ACCACACTCCAGCTGGGATCACATGTGGACTTTTAT...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTATAAAAGTCCACATGTaGTCCCAGCTGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSIKVHM*SQLECG
Trigger: ACCACACTCCAGCTGGGATCACATGTGGACTTTTAT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAGCATTCTGGCACAAATaGAATGGAACTGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPAFWHK*NGTASC
Trigger: ACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGC...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGCATTTGCACAGCATCTaGCAATTTACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLHLHSI*QFTKAS
Trigger: TGAAGCCTTTGTAAATTGTCAGATGCTGTGCAAATG...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCATGGCCATATACTTCTTaGATGTGGCAGCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPWPYTS*MWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCA...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTCACAAACAAACTGAGACGAACATCCTCCCGGAGACTTCAAAGCAAGAGTCTGTGGCCATATACTTCTTaGATGTGGCAGCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LTNKLRRTSSRRLQSKSLWPYTS*MWQLPK
Trigger: CTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCA...CAGACTCTTGCTTTGAAGTCTCCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTTCAGCAGGTTGCCCTaGAGAAGGTTGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVFSRLP*RRLKSR
Trigger: CCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAA...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCTTCTGCAGCAAAGCTaGCACGCTGCTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFLLQQS*HAAVLS
Trigger: GGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAG...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTAATGCCAAGAAGTTCTaGCTGCATGCAAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSNAKKF*LHARSL
Trigger: TAAGCTCCTTGCATGCAGGCAGAACTTCTTGGCATT...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCT +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFRVWCP*SRACQP
Trigger: AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCT...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGCAAATGAAATGGAACTaGCTCTTGTGGGTCTATTTC +
Preference number: 4 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWQMKWN*LLWVYF
Trigger: GAAATAGACCCACAAGAGGCAGTTCCATTTCATTTG...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAGACAACCCAATACAGTaGTATGCAAATGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLYQKQWSGQNRAPITKKDNPIQ*YANGLL
Trigger: CAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTC...TTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAACTGGGGGAGCAGGCATaGCATCTGCGGGTAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKLGEQA*HLRVGL
Trigger: AAGGCCTACCCGCAGATGCCATGCCTGCTCCCCCAG...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR CCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGACTGCCGGCAGCTGAATaGGAAGACAAAGAGAAATTC +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRLPAAE*EDKEKF
Trigger: GAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAG...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTGTTCCTGGTGGCATTTaGACACCATCCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSVPGGI*TPSMRR
Trigger: TCTTCTCATGGATGGTGTCCAAATGCCACCAGGAAC...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGCTGGCGGGATGGAGTaGAAGTGCTTGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKAGGME*KCLRRL
Trigger: CAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLIPAGV*SYFSCK
Trigger: TTTGCAAGAAAAATATGACCACACTCCAGCTGGGAT...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTCCTCAGCGAAAGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAATCCCAGCTGGAGTGTaGTCATATTTTTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LLSERRLNTTFLLICCIRIPAGV*SYFSCK
Trigger: TTTGCAAGAAAAATATGACCACACTCCAGCTGGGAT...TCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
3UTR CAA 72 bp TGGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: WNCLLWVYFRSL*SEFSSQASTRS
Trigger: GCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
3UTR CAA 72 bp GGCCAGTCAATAAAGTGTGGCTGTCATCATCACATATaGAAATTAAGGCCCAGAAGGGAAGGGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GQSIKCGCHHHI*KLRPRREGIWA
Trigger: TGCCCAGATCCCTTCCCTTCTGGGCCTTAATTTCAATATGTGATGATGACAGCCACACTTTATTGACTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS-3UTR TCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGTTTTACCTTGCTGGGTaGCCACCTGATCCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKFYLAG*PPDPLL
Trigger: AAGCAAGGGATCAGGTGGTCACCCAGCAAGGTAAAA...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCTTTTGTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATTAAAGATGACAAACTaGCAACCCAATACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: SFVRGRASPPKGTQLTSTLKMTN*QPNTVL
Trigger: TAGCACTGTATTGGGTTGTCAGTTTGTCATCTTTAA...TGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCACAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGCCATGCACTGCAGCTaGCGGCAGCTGAATGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKAMHCS*RQLNGK
Trigger: CTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAATGTCAACTTGAGGTaGCCAACATTCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPNVNLR*PTFRPR
Trigger: ACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATT...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGGAAGTTCTGCCTGCATaGAAGGAGCTTAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKEVLPA*KELSHG
Trigger: TCCATGGCTAAGCTCCTTGCATGCAGGCAGAACTTC...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGTTTCTTCAGTCCTTCTaGGAGAGAACATACACCTTC +
Preference number: 4 (lower is better)
Translates to: EFSSQASTRSLVRPFEILFLQSF*ERTYTF
Trigger: GAAGGTGTATGTTCTCTCGCAGAAGGACTGAAGAAA...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCCCAATACAGTGCTATaGAAATGGGCTGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPPNTVL*KWAAVC
Trigger: ACACACAGCAGCCCATTTGCATAGCACTGTATTGGG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATGTTCCTGGTGGCATTTaGACACCATCCATGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHVPGGI*TPSMRR
Trigger: TCTTCTCATGGATGGTGTCCAAATGCCACCAGGAAC...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAGCAACAGTTCCTGGTaGCATTTGGACACCATCCAT +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHSNSSW*HLDTIH
Trigger: ATGGATGGTGTCCAAATGCCACCAGGAACTGTTGCT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAACATGTGATCCCAGCTaGAGTGTGGTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPTCDPS*SVVIFF
Trigger: GAAAAATATGACCACACTCCAGCTGGGATCACATGT...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGACATGTGATCCCAGCTaGAGTGTGGTCATATTTTTC +
Preference number: 4 (lower is better)
Translates to: CSQKTSSALGRTGLILKRTCDPS*SVVIFF
Trigger: GAAAAATATGACCACACTCCAGCTGGGATCACATGT...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGATCTGTTAAAGACTCCTaGAGCCACTTTGAGGGAATC +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRSVKDS*SHFEGI
Trigger: GATTCCCTCAAAGTGGCTCCAGGAGTCTTTAACAGA...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTGGAAGATGTCTTCTTaGCCAACATCAGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVWKMSS*PTSGQQ
Trigger: CTGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCA...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTGGACAGGGCTCATTTTaGAGAGGCTGCCAACACATG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSGQGSF*RGCQHM
Trigger: CATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCC...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTGGGAAAGCTGCTTCCTaGATTATGTGTTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPGKAAS*IMCSVY
Trigger: GTACACAGAACACATAATTCAGGAAGCAGCTTTCCC...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTAATGGCCTGGATGGATaGGTCGAGACATGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSNGLDG*VETWGK
Trigger: CTTTCCCCATGTCTCGACTCATCCATCCAGGCCATT...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTCACATCAGCACTGAGTaGCAGGTAGAACGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSHISTE*QVERGK
Trigger: TTTGCCGCGTTCTACCTGGCACTCAGTGCTGATGTG...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTCTTCAGTCCTTCTaGGAGAGAACATACACCTTC +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSFLQSF*ERTYTF
Trigger: GAAGGTGTATGTTCTCTCGCAGAAGGACTGAAGAAA...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAAGACATGGGGAAAGCTaGTTCCTGAATTATGTGTTC +
Preference number: 4 (lower is better)
Translates to: GESCFLNYVFCVLLFIRARHGES*FLNYVF
Trigger: GAACACATAATTCAGGAAGCAGCTTTCCCCATGTCT...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCACAAAGAAAACCCAGACATGGGGAAAGCTaGTTCCTGAATTATGTGTTC +
Preference number: 4 (lower is better)
Translates to: CIRNNGLGRTGHQSQRKPRHGES*FLNYVF
Trigger: GAACACATAATTCAGGAAGCAGCTTTCCCCATGTCT...GGGTTTTCTTTGTGATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTCAAATGAAATGGAACTaGCTCTTGTGGGTCTATTTC +
Preference number: 4 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSQMKWN*LLWVYF
Trigger: GAAATAGACCCACAAGAGGCAGTTCCATTTCATTTG...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCACCTTCCTCCTGATCTaGTGTATCAGAAACAATGGT +
Preference number: 4 (lower is better)
Translates to: IFLANLECLGEQTAVTCPTFLLI*CIRNNG
Trigger: ACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGT...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTACCTTCCTCCTGATCTaGTGTATCAGAAACAATGGT +
Preference number: 4 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSTFLLI*CIRNNG
Trigger: ACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTTTCTCCACATGGCTGTaGAGCCTCCTGACAATGGCT +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSFSTWL*SLLTMA
Trigger: AGCCATTGTCAGGAGGCTCCACAGCCATGTGGAGAA...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGCATCGTCATTGAGGTaGCCAGGGGTGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKASSLR*PGVLKS
Trigger: GCTCTTCAGCACCCCTGGCCACCTCAATGACGATGC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTTCTGAGCAAAGCTGGTaGCACATCAGCACTGAGTGC +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSSEQSW*HISTEC
Trigger: GCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGA...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGGGGAATGGCCTGGATaGATGAGTCGAGACATGGGG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKGEWPG*MSRDMG
Trigger: CCCCATGTCTCGACTCATCCATCCAGGCCATTCCCC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAAACCTAGAATGTCTTaGGGAACAAACGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHKPRMS*GTNGCH
Trigger: GTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTGCTGGGTGACCACCTGATCCCTTGCTTATTAAACGCAGCTAAGCACTATTTTTGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: LLGDHLIPCLLNAAKHYFCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...AAAATAGTGCTTAGCTGCGTTTAATAAGCAAGGGATCAGGTGGTCACCCAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTTGGGGGTGCTGTAAGTaGAATATCAAAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFWGCCK*NIKAEV
Trigger: GACCTCAGCTTTGATATTTCACTTACAGCACCCCCA...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGACATTTGCACAGCATCTaGCAATTTACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRHLHSI*QFTKAS
Trigger: TGAAGCCTTTGTAAATTGTCAGATGCTGTGCAAATG...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTGCTGGGTGACCACCTGATCCCTTGCTTATTAAACGCAGCTAAGCACTATTTTGCCTGGCCTCATTGCTaGATGAATTTAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: LLGDHLIPCLLNAAKHYFAWPHC*MNLKMT
Trigger: TGTCATCTTTAAATTCATTCAGCAATGAGGCCAGGC...AAAATAGTGCTTAGCTGCGTTTAATAAGCAAGGGATCAGGTGGTCACCCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAACCCTGCCAGGAAGGCTaGTGTGATCTGAAGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKPCQEG*CDLKVV
Trigger: CACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGG...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAACTTGGGCACCCACACTaGCAATGTTGTTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKLGHPH*QCCSPP
Trigger: TGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAG...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAAGAGTCTGGTGTCCCTaGAGCCGAGCTTGTCAACCT +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKRVWCP*SRACQP
Trigger: AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCT...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGACATGGGGAAAGCTaGTTCCTGAATTATGTGTTC +
Preference number: 4 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPRHGES*FLNYVF
Trigger: GAACACATAATTCAGGAAGCAGCTTTCCCCATGTCT...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAATAAAGGTGACCTATaGTGTTCCCAGAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: LWCSQKTSSALGRTGLILNKGDL*CSQKTS
Trigger: ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATT...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGTGGAACTGCCTCTTGTaGGTCTATTTCAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKWNCLL*VYFRSL
Trigger: CAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCA...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTTGCAATTGCTCGCAGTaGAGAGCACATTCAATGAGC +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSCNCSQ*RAHSMS
Trigger: GCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCA...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGTTTCTTCAGTCCTTCTaGGAGAGAACATACACCTTC +
Preference number: 4 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKFLQSF*ERTYTF
Trigger: GAAGGTGTATGTTCTCTCGCAGAAGGACTGAAGAAA...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTTATACTTCTTGCATGTaGCAGCTTCCAAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSYTSCM*QLPKAG
Trigger: CCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATA...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTCTGTATCAGAAACAATaGTCTGGGCAGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSLYQKQ*SGQNRA
Trigger: TGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAG...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAA +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKADASV*DIVIAQ
Trigger: TTGCGCGATAACAATATCTCAGACCGAGGCATCTGC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTTGTACATCCTGGGATTaGATCTTGGGAAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFCTSWD*ILGRSQ
Trigger: TTGACTTCTTCCCAAGATTCAATCCCAGGATGTACA...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCATTTGCACAGCATCTaGCAATTTACAAAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVHLHSI*QFTKAS
Trigger: TGAAGCCTTTGTAAATTGTCAGATGCTGTGCAAATG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTGACCACCTGATCCCTTaGTTATTAAACGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSDHLIP*LLNAAK
Trigger: CTTAGCTGCGTTTAATAAGCAAGGGATCAGGTGGTC...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAACATTCGCTTTCACCGTaGCAAGATCAAGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKHSLSP*QDQAAF
Trigger: GAAGGCTGCTTGATCTTGCCACGGTGAAAGCGAATG...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGCCAGACTTCCAGGATaGTGTCATTCCTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKARLPG*CHSFQG
Trigger: CCCTTGAAAGGAATGACACCATCCTGGAAGTCTGGC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATAATAAAGGTGACCTATaGTGTTCCCAGAAAACAAGT +
Preference number: 4 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHNKGDL*CSQKTS
Trigger: ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATT...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR GCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGACAACCCAATACAGTaGTATGCAAATGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKDNPIQ*YANGLL
Trigger: CAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGGGAAAGCTGCTTCCTaGATTATGTGTTCTGTGTAC +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKGKAAS*IMCSVY
Trigger: GTACACAGAACACATAATTCAGGAAGCAGCTTTCCC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAATGGAACTGCCTCTTGTaGGTCTATTTCAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKWNCLL*VYFRSL
Trigger: CAGACTTCTGAAATAGACCCACAAGAGGCAGTTCCA...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR TCA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTTATACATTATCGGGTTaGAAACATCATTTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSYTLSG*KHHFPP
Trigger: CGGAGGAAAATGATGTTTTCAACCCGATAATGTATA...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR TCA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAATTAAAGATGACAAACTaGCAACCCAATACAGTGCTA +
Preference number: 4 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKLKMTN*QPNTVL
Trigger: TAGCACTGTATTGGGTTGTCAGTTTGTCATCTTTAA...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS GCA 90 bp CACCCGGTGCAGCTGGCGGGATGGAGTGGAAGTGCTTGCGGAGGCTaGGGGCCAGACACCAGCGGGCACAGGCCTGGCGCCGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: HPVQLAGWSGSACGG*GPDTSGHRPGAGAG
Trigger: CCCTGCTCCGGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp TCTTGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTGGAAGTGCTTaGGGAGGCTGCGGGCCAGACACCAGCGGGCACAGGCCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: SWPHPVQLAGWSGSA*GGCGPDTSGHRPGA
Trigger: GGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp ACGCTCTTGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTGGAAGTaGTTGCGGAGGCTGCGGGCCAGACACCAGCGGGCACAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TLLASPGAAGGMEWK*LRRLRARHQRAQAW
Trigger: CCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp CAGCGGGCACAGGCCTGGCGCCGGAGCAGGGCCTTCTCAGATGTCTaGCACTCAGCCAGCAGGCCCCAGTGCTCCCGGGACAACAGCCCT +
Preference number: 5 (lower is better)
Translates to: QRAQAWRRSRAFSDV*HSASRPQCSRDNSP
Trigger: AGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp AAGTGCTTGCGGAGGCTGCGGGCCAGACACCAGCGGGCACAGGCCTaGCGCCGGAGCAGGGCCTTCTCAGATGTCTGGCACTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KCLRRLRARHQRAQA*RRSRAFSDVWHSAS
Trigger: GCTGGCTGAGTGCCAGACATCTGAGAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp GCATGCACGCTCTTGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTaGAAGTGCTTGCGGAGGCTGCGGGCCAGACACCAGCGGGCACAG +
Preference number: 5 (lower is better)
Translates to: ACTLLASPGAAGGME*KCLRRLRARHQRAQ
Trigger: CTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp GCATGGCATGCACGCTCTTGGCCTCACCCGGTGCAGCTGGCGGGATaGAGTGGAAGTGCTTGCGGAGGCTGCGGGCCAGACACCAGCGGG +
Preference number: 5 (lower is better)
Translates to: AWHARSWPHPVQLAG*SGSACGGCGPDTSG
Trigger: CCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGATGCAGGAGCGTGCTCTaGCCACTGCCCGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PRLQPGPGPPRHPLCCPRCRSVL*PLPASP
Trigger: GGGTGAGGCGGGCAGTGGCAAGAGCACGCTCCTGCA...TCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS GCA 90 bp GCCCTGCAGCCCACAGCAAGTGCAGCCGCTGCAGGAGCGTGCTCTTaGCACTGCCCGCCTCACCCACCACCAGCACAGTGTCCGCATCGT +
Preference number: 5 (lower is better)
Translates to: ALQPTASAAAAGACS*HCPPHPPPAQCPHR
Trigger: ACGATGCGGACACTGTGCTGGTGGTGGGTGAGGCGGGCAGTGGCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300589.6
ENST00000526417.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp CCAGATGAACCCGGGCATGGCATGCACGCTCTTGGCCTCACCCGGTaGAGCTGGCGGGATGGAGTGGAAGTGCTTGCGGAGGCTGCGGGC +
Preference number: 5 (lower is better)
Translates to: PDEPGHGMHALGLTR*SWRDGVEVLAEAAG
Trigger: GCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTTCATCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp GAACCCGGGCATGGCATGCACGCTCTTGGCCTCACCCGGTGCAGCTaGCGGGATGGAGTGGAAGTGCTTGCGGAGGCTGCGGGCCAGACA +
Preference number: 5 (lower is better)
Translates to: EPGHGMHALGLTRCS*RDGVEVLAEAAGQT
Trigger: TGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: KASARAWAPSSPTLLPQNPLGQH*GSRGSD
Trigger: ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGG...ATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS TCA 90 bp GGTGGCACAAACCGTGCAGGGCTGAGGTCTCTTGGAGCAGGCGGATaGGGCGGTCCGCCACCCCGGGCTCATGATGGCGCTTCCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GGTNRAGLRSLGAGG*GGPPPRAHDGASSG
Trigger: ACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAGAGACCTCAGCCCTGCACGGTTTGTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp CTGGCACTCAGCCAGCAGGCCCCAGTGCTCCCGGGACAACAGCCCTaGCAGGAAGGCTGCTGTGATCTGAAGGTTGTGCGGCTCGGCCTT +
Preference number: 5 (lower is better)
Translates to: LALSQQAPVLPGQQP*QEGCCDLKVVRLGL
Trigger: AAGGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGCTGAGTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CAGCTGTGGAAACACCAGCCAAGGATGCGACAGCGGCCCCCACCATTGACCCTGCAGCAGCCATGCAGCTaGGGGGACTGGCTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: QLWKHQPRMRQRPPPLTLQQPCS*GDWLSA
Trigger: GGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCTG...CAGGGTCAATGGTGGGGGCCGCTGTCGCATCCTTGGCTGGTGTTTCCACAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp TCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCATGGAGTGGAAGTGCTaGCGGAGGCTGCGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: SQELQGGVASEPLGQHLGMEWKC*RRLRAR
Trigger: TCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCAT...GCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp CACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCCTCCCACACTTAGCCTaGATGGTGCTCCCCCATACC +
Preference number: 5 (lower is better)
Translates to: HPRLQPGPGPPRHPLCCPLPHLA*MVLPHT
Trigger: GGTATGGGGGAGCACCATCAAGGCTAAGTGTGGGAG...GGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS TCA 90 bp GGCCCCAGTGCTCCCGGGACAACAGCCCTGCCAGGAAGGCTGCTGTaGTCTGAAGGTTGTGCGGCTCGGCCTTCTGCAGCAAAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GPSAPGTTALPGRLL*SEGCAARPSAAKLP
Trigger: TGGCAGCTTTGCTGCAGAAGGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGCACTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp GCAGCAAAGCTGCCACGCTGCTGTCCTTTCCCTCCGAGGCCTGGATaGACATCGTGGGCAGGAGCCTGGCCATTGGTGAGTTGCCTGGCC +
Preference number: 5 (lower is better)
Translates to: AAKLPRCCPFPPRPG*TSWAGAWPLVSCLA
Trigger: GGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp CAGCAGGCCCCAGTGCTCCCGGGACAACAGCCCTGCCAGGAAGGCTaGTGTGATCTGAAGGTTGTGCGGCTCGGCCTTCTGCAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: QQAPVLPGQQPCQEG*CDLKVVRLGLLQQS
Trigger: GCTTTGCTGCAGAAGGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp ATCTCGTACAGGCTCCGGATGAGCCAGATGAACCCGGGCATGGCATaGACGCTCTTGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ISYRLRMSQMNPGMA*TLLASPGAAGGMEW
Trigger: CCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTTCATCTGGCTCATCCGGAGCCTGTACGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: LGGSAEASPILWRRGCPCPLGQH*GSRGSD
Trigger: ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGG...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AGCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: SISAKAWAPTLPMLFPTRPLGQH*GSRGSD
Trigger: ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGG...CCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR CAA 90 bp CACCAGGCTGAGCCACCTCAAGCTCTGGTGATCACCCAAGGCTTCAGCCAGGGCAACTGCAAGGAGGTGTaGCCTCGGAGCCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: HQAEPPQALVITQGFSQGNCKEV*PRSPSA
Trigger: GGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTT...GCCCTGGCTGAAGCCTTGGGTGATCACCAGAGCTTGAGGTGGCTCAGCCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS TCA 90 bp GTCTCTTGGAGCAGGCGGATGAGGCGGTCCGCCACCCCGGGCTCATaGTGGCGCTTCCTCAGGTACAGCTCGATGCCCTGTTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: VSWSRRMRRSATPGS*WRFLRYSSMPCSEK
Trigger: CTTCTCTGAACAGGGCATCGAGCTGTACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGCGGACCGCCTCATCCGCCTGCTCCAAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 90 bp CAGTGCTCCCGGGACAACAGCCCTGCCAGGAAGGCTGCTGTGATCTaGAGGTTGTGCGGCTCGGCCTTCTGCAGCAAAGCTGCCACGCTG +
Preference number: 5 (lower is better)
Translates to: QCSRDNSPARKAAVI*RLCGSAFCSKAATL
Trigger: CAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp CCAACATTCAGGCCACGTGCAGCCTTCCGAGCCAGCCGCTCCTCCTaGATCTCGTACAGGCTCCGGATGAGCCAGATGAACCCGGGCATG +
Preference number: 5 (lower is better)
Translates to: PTFRPRAAFRASRSS*ISYRLRMSQMNPGM
Trigger: CATGCCCGGGTTCATCTGGCTCATCCGGAGCCTGTACGAGATGCAGGAGGAGCGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp CTGCCACGCTGCTGTCCTTTCCCTCCGAGGCCTGGATGCACATCGTaGGCAGGAGCCTGGCCATTGGTGAGTTGCCTGGCCTGCCACAAT +
Preference number: 5 (lower is better)
Translates to: LPRCCPFPPRPGCTS*AGAWPLVSCLACHN
Trigger: ATTGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTAGTTATTCCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ASEPLGQHLGSRGSDVVIPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...AATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529633.5
ENST00000646677.1
CDS-3UTR CAA 90 bp GGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTAACTCACTACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: GVASEPLGQHLGSRGSDVTHYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGT...TACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529633.5
CDS-3UTR CAA 90 bp GCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGGCCTTTTCACATGTGTaGCAGCCTTTTAGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ARRCCLGAPRPALGLPRQAFSHV*QPFRLG
Trigger: ACCCAGCCTAAAAGGCTGCAACACATGTGAAAAGGC...CTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS TCA 90 bp GACCCCAGGCCTGGGAGCATGTCGCGGCCAAGGATGAAAGAAGGCTaGGGATCAAGCTGGGACGGGACAATGCCTGCTCCTCTTACCCGG +
Preference number: 5 (lower is better)
Translates to: DPRPGSMSRPRMKEG*GSSWDGTMPAPLTR
Trigger: CCGGGTAAGAGGAGCAGGCATTGTCCCGTCCCAGCTTGATCCTCAGCCTTCTTTCATCCTTGGCCGCGACATGCTCCCAGGCCTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS GCA 90 bp TCTGAAGGTTGTGCGGCTCGGCCTTCTGCAGCAAAGCTGCCACGCTaGTGTCCTTTCCCTCCGAGGCCTGGATGCACATCGTGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: SEGCAARPSAAKLPR*CPFPPRPGCTSWAG
Trigger: TCCTGCCCACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCACAACCTTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACGTCGGCCTGGGCTTCTaGGGCAGCCGCGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHVGLGF*GSRDEL
Trigger: AAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGAC...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGGTCCAGGGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGGTCGGCCTGGGCTTCTaGGGCAGCCGCGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: GSREMPHHRVSQTQNLSRVGLGF*GSRDEL
Trigger: AAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGAC...CCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCCCTGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp CCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGACCTGGCCTGCCACAATaGAAGAGGTGTCTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: PRLQPGPGPPRHPLCCPRPGLPQ*KRCLSK
Trigger: TTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGG...TCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGGGTTTCTCCATGTaGGTCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TARRCCLGAPRPALGLPRQGFSM*VRLVSN
Trigger: GTTTGAGACCAACCTGACCAACATGGAGAAACCCTG...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS TCA 90 bp CCAGGGCAGCACACTCAGTGGGGCCCACACTGCAAAATGTCAACTTaGGGTGCCCAACATTCAGGCCACGTGCAGCCTTCCGAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PGQHTQWGPHCKMST*GAQHSGHVQPSEPA
Trigger: GGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAGTGTGGGCCCCACTGAGTGTGCTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 90 bp ACTCCCCATCTGACCCCAGGCCTGGGAGCATGTCGCGGCCAAGGATaGAAGAAGGCTGAGGATCAAGCTGGGACGGGACAATGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TPHLTPGLGACRGQG*KKAEDQAGTGQCLL
Trigger: GAGCAGGCATTGTCCCGTCCCAGCTTGATCCTCAGCCTTCTTTCATCCTTGGCCGCGACATGCTCCCAGGCCTGGGGTCAGATGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS GCA 90 bp GCAGCACACTCAGTGGGGCCCACACTGCAAAATGTCAACTTGAGGTaGCCAACATTCAGGCCACGTGCAGCCTTCCGAGCCAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: AAHSVGPTLQNVNLR*PTFRPRAAFRASRS
Trigger: GGAGCGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAGTGTGGGCCCCACTGAGTGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp GCATTCTTCAGCAGGTTGCCCTGCAGAAGGTTGAAGAGCAGGGTCTaGACAGAGGTGGGGTCGGTCGGGGAGCAGTGGCGTTCACGATCC +
Preference number: 5 (lower is better)
Translates to: AFFSRLPCRRLKSRV*TEVGSVGEQWRSRS
Trigger: GGATCGTGAACGCCACTGCTCCCCGACCGACCCCACCTCTGTCCAGACCCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp TTCTGCAGCAAAGCTGCCACGCTGCTGTCCTTTCCCTCCGAGGCCTaGATGCACATCGTGGGCAGGAGCCTGGCCATTGGTGAGTTGCCT +
Preference number: 5 (lower is better)
Translates to: FCSKAATLLSFPSEA*MHIVGRSLAIGELP
Trigger: AGGCAACTCACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCAGGGATCTGGGCAGTGTaGCAAAGCAGGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPGIWAV*QSRVAE
Trigger: CTCTGCCACCCTGCTTTGCAACACTGCCCAGATCCC...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS TCA 90 bp CTCCGAGGCCTGGATGCACATCGTGGGCAGGAGCCTGGCCATTGGTaGGTTGCCTGGCCTGCCACAATTGAAGAGGTGTCTGAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: LRGLDAHRGQEPGHW*VAWPATIEEVSEQS
Trigger: GCTTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp TGCTGTGATCTGAAGGTTGTGCGGCTCGGCCTTCTGCAGCAAAGCTaGCACGCTGCTGTCCTTTCCCTCCGAGGCCTGGATGCACATCGT +
Preference number: 5 (lower is better)
Translates to: CCDLKVVRLGLLQQS*HAAVLSLRGLDAHR
Trigger: ACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCACAACCTTCAGATCACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGCCTGGGCTTCTTGGGCAGCCGCGATGAGCTTCTGACAGGCCCAAGTACCCTTGTCCGAGGAGGACACTaGCTCTTTCCTCCTCATCGT +
Preference number: 5 (lower is better)
Translates to: GLGFLGSRDELLTGPSTLVRGGH*LFPPHR
Trigger: ACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGAC...AAGGGTACTTGGGCCTGTCAGAAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp TCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCACCGTGGTCCTCAGCTaGGCCATATACTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: SQELQGGVASEPLGQHLGTVVLS*AIYFLH
Trigger: ATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGT...GCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp GCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTGATGTAGTTATTGCATTCTTCAGCAGGTaGCCCTGCAGAAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ASEPLGQHLGSRGSDVVIAFFSR*PCRRLK
Trigger: CTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGC...AATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGCGGCTGGTCACCACCTaGCGGGCATTCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRRLVTT*RAFFSR
Trigger: CCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCG...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ACCCAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCACTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: TQGFSQGLGPLVTHSVAPLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...TGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp ATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGCCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ISAKAWAPTLPMLFPTRLPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...CAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LGTHTANVVPHQAEPPQAPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACCCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCATCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: CQGLGTHTANVVPHQAEPSLQPS*STSSRE
Trigger: CTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGA...TGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp GCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACTCGTCACCCACTCTGTaGCCCCAGAATTACAGAGCC +
Preference number: 5 (lower is better)
Translates to: AKAWAPTLPMLFPTRLSHSSPTL*PQNYRA
Trigger: GGCTCTGTAATTCTGGGGCAACAGAGTGGGTGACGA...GTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527052.5
CDS-3UTR CAA 90 bp CTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCCCATGCCTGGCCTCATaGCTGAATGAATTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: LQGGVASEPLGQHLGSRGPCLAS*LNEFKD
Trigger: ATCTTTAAATTCATTCAGCAATGAGGCCAGGCATGG...GCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS GCA 90 bp TGCCGGCAGCTGAATGGGAAGACAAAGAGAAATTCCTGGAAGTCTTaGCCTGCAGCCCACAGCAAGTGCAGCCGCTGCAGGAGCGTGCTC +
Preference number: 5 (lower is better)
Translates to: CRQLNGKTKRNSWKS*PAAHSKCSRCRSVL
Trigger: GAGCACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300589.6
ENST00000526417.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCTGCAGGAGCGTGCTCTaGCCACTGCCCGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: PPDLLYQKQWSGQNRAPICRSVL*PLPASP
Trigger: GGGTGAGGCGGGCAGTGGCAAGAGCACGCTCCTGCA...GATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACCGGCTGGTCACCACCTaGCGGGCATTCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HFEEAANTCHPASGAQTHRLVTT*RAFFSR
Trigger: CCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCG...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAAACTGCAAGGAGGTGTaGCCTCGGAGCCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPNCKEV*PRSPSA
Trigger: GGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTT...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGACTCACTACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: APTLPMLFPTRLSHLKLWTHYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGT...CCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524712.5
ENST00000529633.5
ENST00000534067.5
CDS-3UTR CAA 90 bp GCATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTCGTCACCCACTCTGTaGCCCCAGAATCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: ASVPRLGHPHCQCCSPPGSSPTL*PQNLNS
Trigger: GCTGTTCAGATTCTGGGGCAACAGAGTGGGTGACGA...GCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524712.5
CDS TCA 90 bp ATGTCCGAGGAGGACACTTGCTCTTTCCTCCTCATCGTGAGAGGCTaGACCACCCTCTTCCCCCATCAAAGCCCATTAGGCTGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: MSEEDTCSFLLIVRG*TTLFPHQSPLGWGS
Trigger: GCTCCCCCAGCCTAATGGGCTTTGATGGGGGAAGAGGGTGGTTCAGCCTCTCACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000527070.5
ENST00000532206.1
CDS GCA 90 bp CACACTGCAAAATGTCAACTTGAGGTGCCCAACATTCAGGCCACGTaGAGCCTTCCGAGCCAGCCGCTCCTCCTGCATCTCGTACAGGCT +
Preference number: 5 (lower is better)
Translates to: HTAKCQLEVPNIQAT*SLPSQPLLLHLVQA
Trigger: AGCCTGTACGAGATGCAGGAGGAGCGGCTGGCTCGGAAGGCTGCACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp CCCCAGCCTGAACAGCAATGCCCAGTAACACTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCAGCAGCTGCTCCACGCCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: PQPEQQCPVTLTTEP*RHQGKAAAAPRQCH
Trigger: GTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGTGTTACTGGGCATTGCTGTTCAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529633.5
CDS CCA 90 bp AGTTCCTGGTGGCATTTGGACACCATCCATGAGAAGACAGGCAGGTaGCACAAACCGTGCAGGGCTGAGGTCTCTTGGAGCAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SSWWHLDTIHEKTGR*HKPCRAEVSWSRRM
Trigger: CATCCGCCTGCTCCAAGAGACCTCAGCCCTGCACGGTTTGTGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAATGCCACCAGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCGGCTGGTCACCACCTaGCGGGCATTCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNRLVTT*RAFFSR
Trigger: CCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACGAGAAGCCCTTGAGGTaGAACTCGGTGCGGATGTAC +
Preference number: 5 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHEKPLR*NSVRMY
Trigger: GTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTC...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: KASARAWAPSSPTLLPQNLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...ATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000524712.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp TGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAAGAGGCCCCTCGGCCAGCACTaGGGCTCCCGCGGCAGTGAT +
Preference number: 5 (lower is better)
Translates to: CSQKTSSALGRTGLILKRPLGQH*GSRGSD
Trigger: ATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGG...CCTCTTCAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATCTGAACAGCAATGCCCAGTAACTCACTACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: GPLVTHSVAPESEQQCPVTHYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGT...TACTGGGCATTGCTGTTCAGATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524712.5
CDS-3UTR CAA 90 bp ACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGGAAGCCAAAAGTGTTTaGATTGCCTGGCTATTTTCT +
Preference number: 5 (lower is better)
Translates to: TARRCCLGAPRPALGLPREAKSV*IAWLFS
Trigger: AGAAAATAGCCAGGCAATCAAAACACTTTTGGCTTC...CCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS CCA 90 bp GCACTGGAAAGTGATGTGAAGGAATTCCAGGGGCGCCGTACTCCCTaGCACGACACCTTTGGCACGCACCAGGAAGCCAAGAGAAATGTC +
Preference number: 5 (lower is better)
Translates to: ALESDVKEFQGRRTP*HDTFGTHQEAKRNV
Trigger: GACATTTCTCTTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAGGGAGTACGGCGCCCCTGGAATTCCTTCACATCACTTTCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGCCCTCTGGGACGGTGTGAAGATCGGCAACCTGATTTCATCACATTCATACTGGTCGGCCTGGGCTTCTaGGGCAGCCGCGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: CPLGRCEDRQPDFITFILVGLGF*GSRDEL
Trigger: AAGCTCATCGCGGCTGCCCAAGAAGCCCAGGCCGAC...CAGTATGAATGTGATGAAATCAGGTTGCCGATCTTCACACCGTCCCAGAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGCAGCAGCCATGCAGCTaGGGGGACTGGCTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: LWCSQKTSSALGRTGLILQQPCS*GDWLSA
Trigger: GGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCTG...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCCAGCAGCCATGCAGCTaGGGGGACTGGCTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: DKLTTQYSAMQMGCCVYSQQPCS*GDWLSA
Trigger: GGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCTG...GGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTCAGCAGCCATGCAGCTaGGGGGACTGGCTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSQQPCS*GDWLSA
Trigger: GGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCTG...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAGAGAAGCCCTTGAGGTaGAACTCGGTGCGGATGTAC +
Preference number: 5 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGEKPLR*NSVRMY
Trigger: GTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTC...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGCTGGCCATTGGTGAGTaGCCTGGCCTGCCACAATTG +
Preference number: 5 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMLAIGE*PGLPQL
Trigger: CAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAG...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCCATGTTGGTCAGGTTGGTCTCAAACCCCCAACCTCAGGTGATCTGCCCACCTCTGGCCATTGGTGAGTaGCCTGGCCTGCCACAATTG +
Preference number: 5 (lower is better)
Translates to: SMLVRLVSNPQPQVICPPLAIGE*PGLPQL
Trigger: CAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAG...AGGTGGGCAGATCACCTGAGGTTGGGGGTTTGAGACCAACCTGACCAACATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGATGGAGTGGAAGTGCTaGCGGAGGCTGCGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLMEWKC*RRLRAR
Trigger: TCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCAT...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCCATGTTGGTCAGGTTGGTCTCAAACCCCCAACCTCAGGTGATCTGCCCACCTTCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: SMLVRLVSNPQPQVICPPSLQPS*STSSRE
Trigger: CTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGA...AGGTGGGCAGATCACCTGAGGTTGGGGGTTTGAGACCAACCTGACCAACATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp CAAGGCTTCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTTGCCCCAGAATTGTACATCCTGGGATaGAATCTTGGGAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QGFSQGLGPLVTHSVAPELYILG*NLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAA...TTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGAAGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp ATCAGTGCCAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGCAGAATTACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: ISAKAWAPTLPMLFPTRLQNYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTAATTCTG...CAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTGGCACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527052.5
CDS-3UTR CAA 90 bp CCCGGAGACTTCAAAGCAAGAGTCTGGTGTCCCTGCAGCCGAGCTTGTCAACCTGACAACGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PGDFKARVWCPCSRACQPDNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCGTTGTC...AGGTTGACAAGCTCGGCTGCAGGGACACCAGACTCTTGCTTTGAAGTCTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS TCA 90 bp TCCGCACAGAGAGTGGTTTGGCCATGCACTGCAGCTGCCGGCAGCTaGATGGGAAGACAAAGAGAAATTCCTGGAAGTCTTGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SAQRVVWPCTAAAGS*MGRQREIPGSLALQ
Trigger: CTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300589.6
ENST00000526417.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp CCCATACCTGAACAGCAATGCCCAGTAACACTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCAGCAGCTGCTCCACGCCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: PIPEQQCPVTLTTEP*RHQGKAAAAPRQCH
Trigger: GTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGTGTTACTGGGCATTGCTGTTCAGGTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS CCA 90 bp GTTGCCTGGCCTGCCACAATTGAAGAGGTGTCTGAGCAAAGCTGGTaGCACATCAGCACTGAGTGCCAGGTAGAACGCGGCAAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VAWPATIEEVSEQSW*HISTECQVERGKEA
Trigger: TGCTTCTTTGCCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GACCAGCAGCTCGACCAGCTGGCTCCTCTGTGCCTGAAAAGCCTCCTGCGAGCATTGGCCATATACTTCTaGCATGTGGCAGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: DQQLDQLAPLCLKSLLRALAIYF*HVAASK
Trigger: TTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAA...TGCTCGCAGGAGGCTTTTCAGGCACAGAGGAGCCAGCTGGTCGAGCTGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp CCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACACCGTGGTCCTCAGCTaGGCCATATACTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: PGLSTKRHSVNKHIHGPHTVVLS*AIYFLH
Trigger: ATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGT...GTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACTGCAGGAGCGTGCTCTaGCCACTGCCCGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: GTASCGSISEVCCQSSVHCRSVL*PLPASP
Trigger: GGGTGAGGCGGGCAGTGGCAAGAGCACGCTCCTGCA...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGATGCAGGAGCGTGCTCTaGCCACTGCCCGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRCRSVL*PLPASP
Trigger: GGGTGAGGCGGGCAGTGGCAAGAGCACGCTCCTGCA...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGTGTTCAGAGAAGCCCTaGAGGTTGAACTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMCSEKP*RLNSVR
Trigger: CCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACA...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCAATGGAGTGGAAGTGCTaGCGGAGGCTGCGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAMEWKC*RRLRAR
Trigger: TCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCAT...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: QGLGTHTANVVPHQAEPPLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...AGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGGCACATTCAATGAGCTaGCAGATGCCTCGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRAHSMS*QMPRSE
Trigger: CTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGC...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGAACTGCAAGGAGGTGTaGCCTCGGAGCCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LWCSQKTSSALGRTGLILNCKEV*PRSPSA
Trigger: GGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTT...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCATCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPSLQPS*STSSRE
Trigger: CTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGA...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGGTGAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 5 (lower is better)
Translates to: THTANVVPHQAEPPQALVRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...CACCAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS TCA 90 bp AGCTCGGTGCTCCCACACTTAGCCTTGATGGTGCTCCCCCATACCTaGACAGCAATGCCCAGTAACACTCACTACAGAGCCTTGCAGACA +
Preference number: 5 (lower is better)
Translates to: SSVLPHLALMVLPHT*TAMPSNTHYRALQT
Trigger: TGTCTGCAAGGCTCTGTAGTGAGTGTTACTGGGCATTGCTGTTCAGGTATGGGGGAGCACCATCAAGGCTAAGTGTGGGAGCACCGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS GCA 90 bp CCAGAATCTGAACAGCAATGCCCAGTAACACTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCAGCAGCTGCTCCACGCCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: PESEQQCPVTLTTEP*RHQGKAAAAPRQCH
Trigger: GTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGTGTTACTGGGCATTGCTGTTCAGATTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524712.5
CDS GCA 90 bp GAGATCGAGACCATCCTGGTTAACACAGTGAAACCTACAGAGCCTTaGAGACACCAAGGCAAGGCAGCAGCTGCTCCACGCCAATGTCAC +
Preference number: 5 (lower is better)
Translates to: EIETILVNTVKPTEP*RHQGKAAAAPRQCH
Trigger: GTGACATTGGCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGGTTTCACTGTGTTAACCAGGATGGTCTCGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCAGTCCGAGGAGGACACTaGCTCTTTCCTCCTCATCGT +
Preference number: 5 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPVRGGH*LFPPHR
Trigger: ACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGAC...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300589.6
CDS-3UTR CAA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGCAGCCATGCAGCTaGGGGGACTGGCTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHQQPCS*GDWLSA
Trigger: GGCCGACAGCCAGTCCCCCAAGCTGCATGGCTGCTG...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCGCACAGAGAGTGGTTaGGCCATGCACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGRTESG*AMHCSC
Trigger: GCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCG...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTCTGGAAGATGTCTTCTaGACCAACATCAGGCCAACA +
Preference number: 5 (lower is better)
Translates to: LGGSAEASPILWRRGCPCLEDVF*TNIRPT
Trigger: TGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCAG...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACGCATTCTTCAGCAGGTaGCCCTGCAGAAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDAFFSR*PCRRLK
Trigger: CTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGC...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGAGATGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATGTTCAGAGAAGCCCTaGAGGTTGAACTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: GDATPPSQPDAKPFKEVGCSEKP*RLNSVR
Trigger: CCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACA...TCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGAGTTCCTGGTGGCATTaGGACACCATCCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRSSWWH*DTIHEK
Trigger: CTTCTCATGGATGGTGTCCAAATGCCACCAGGAACT...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGAAGTTCCTGGTGGCATTaGGACACCATCCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: SRGQSHTMEEGLSLYILGSSWWH*DTIHEK
Trigger: CTTCTCATGGATGGTGTCCAAATGCCACCAGGAACT...TCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCTGGCACGACACCTTaGGCACGCACCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRPGTTP*ARTRKP
Trigger: TGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAGG...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGCCTGGCACGACACCTTaGGCACGCACCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLPGTTP*ARTRKP
Trigger: TGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAGG...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: LGTHTANVVPHQAEPPQALQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...AGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524712.5
ENST00000527052.5
ENST00000529633.5
ENST00000534067.5
ENST00000646677.1
CDS-3UTR CAA 90 bp GTGAGAGGCCGGGCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGCACATTCAATGAGCTaGCAGATGCCTCGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: VRGRASPPKGTQLTSTSMAHSMS*QMPRSE
Trigger: CTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGC...CATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGCCCGGCCTCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTCCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGTCCCTGCAGCCGAGCTaGTCAACCTCCTCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLSLQPS*STSSRE
Trigger: CTCTCTAGAGGAGGTTGACAAGCTCGGCTGCAGGGA...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 5 (lower is better)
Translates to: HFEEAANTCHPASGAQTHEEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ATCGGCAACCTGATTTCATCACATTCATACTGGCTGACGAAACCCCGCTCCCATTGTGTGTCTGGCTGCTaGGGAGAGAGGGTGTACCCC +
Preference number: 5 (lower is better)
Translates to: IGNLISSHSYWLTKPRSHCVSGC*GERVYP
Trigger: GGGGTACACCCTCTCTCCCAAGCAGCCAGACACACA...ATGGGAGCGGGGTTTCGTCAGCCAGTATGAATGTGATGAAATCAGGTTGCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp ACTATTTTAACACAAGGCCTGCATGAGAGGCTGCTCGCTGTGGAGAGCCAGCCAGAAACCTACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: TILTQGLHERLLAVESQPETYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGGTTTC...TGGCTGGCTCTCCACAGCGAGCAGCCTCTCATGCAGGCCTTGTGTTAAAATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS GCA 90 bp AAGGATGAAAGAAGGCTGAGGATCAAGCTGGGACGGGACAATGCCTaGTCCTCTTACCCGGAGAATGTCCGAGGAGGACACTTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: KDERRLRIKLGRDNA*SSYPENVRGGHLLF
Trigger: AAAGAGCAAGTGTCCTCCTCGGACATTCTCCGGGTAAGAGGAGCAGGCATTGTCCCGTCCCAGCTTGATCCTCAGCCTTCTTTCATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCGCATTCTTCAGCAGGTaGCCCTGCAGAAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSAFFSR*PCRRLK
Trigger: CTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGC...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CATTTTGAAGAGGCTGCCAACACATGTCACCCAGCCTCTGGGGCCCAAACTCACAGTTCCTGGTGGCATTaGGACACCATCCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: HFEEAANTCHPASGAQTHSSWWH*DTIHEK
Trigger: CTTCTCATGGATGGTGTCCAAATGCCACCAGGAACT...GTGAGTTTGGGCCCCAGAGGCTGGGTGACATGTGTTGGCAGCCTCTTCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCATGGAGTGGAAGTGCTaGCGGAGGCTGCGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: IFLANLECLGEQTAVTCPMEWKC*RRLRAR
Trigger: TCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCAT...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCCCCACACTGCCAATGTaGTTCCCCACCAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DKLTTQYSAMQMGCCVYSPTLPM*FPTRLS
Trigger: GCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGG...GGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp CTGGGAGGATCAGCAGAGGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTATGGCAAAAGTAGGCTaGGGAAAAGTCTATCCTGGA +
Preference number: 5 (lower is better)
Translates to: LGGSAEASPILWRRGCPCMAKVG*GKVYPG
Trigger: TCCAGGATAGACTTTTCCCAAGCCTACTTTTGCCAT...ACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCCTCTGCTGATCCTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 5 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNEEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 90 bp AAGAGTAGAGTCCGCACAGAGAGTGGTTTGGCCATGCACTGCAGCTaGCGGCAGCTGAATGGGAAGACAAAGAGAAATTCCTGGAAGTCT +
Preference number: 5 (lower is better)
Translates to: KSRVRTESGLAMHCS*RQLNGKTKRNSWKS
Trigger: AGACTTCCAGGAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCGGACTCTACTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 90 bp GAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTTGCATGTaGCAGCTGAGTTTGAAAACCTGGGTCCACCATACACTTGGGCAA +
Preference number: 5 (lower is better)
Translates to: EQTPWSSAWPYTSCM*QLSLKTWVHHTLGQ
Trigger: TTGCCCAAGTGTATGGTGGACCCAGGTTTTCAAACTCAGCTGCCACATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526417.6
CDS-3UTR CAA 90 bp GGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCGGTTGGCCATATACTTCTaGCATGTGGCAGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: GAQTHSLLTNKLRRTSSRLAIYF*HVAASK
Trigger: TTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAA...CCGGGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ACCTCCAGGACATTCTCTGTGTATATGTCCTCCAGGCAGAGCGTCTCTGCTCCAACCGTGGTCCTCAGCTaGGCCATATACTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: TSRTFSVYMSSRQSVSAPTVVLS*AIYFLH
Trigger: ATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGT...TGGAGCAGAGACGCTCTGCCTGGAGGACATATACACAGAGAATGTCCTGGAGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp GGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCACGCACAGAGAGTGGTTaGGCCATGCACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GESCFLNYVFCVLLFIRARTESG*AMHCSC
Trigger: GCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCG...TGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGACATGGGGAAAGCTGCTTCCTGAATTATGTGTTCTGTGTACTCCTCTTCATCGGCTGGTCACCACCTaGCGGGCATTCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ETWGKLLPELCVLCTPLHRLVTT*RAFFSR
Trigger: CCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCG...ATGAAGAGGAGTACACAGAACACATAATTCAGGAAGCAGCTTTCCCCATGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCACTGGCCATTGGTGAGTaGCCTGGCCTGCCACAATTG +
Preference number: 5 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPLAIGE*PGLPQL
Trigger: CAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAG...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAATCCCAGGAACTGCAAGGAGGTGTTGCCTCGGAGCCCCTCGGCCAGCACTTGTCAGTCAATTTGTTGTaGAATAGAGCTAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: ESQELQGGVASEPLGQHLSVNLL*NRANFC
Trigger: GCAGAAGTTAGCTCTATTCAACAACAAATTGACTGA...CAAGTGCTGGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTTCCTGGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp CAAGGCTTGGGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: QGLGTHTANVVPHQAEPPYFRSL*SEFSSQ
Trigger: CTGTGAACTGAACTCTGACAACAGACTTCTGAAATA...AGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCCCAAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS-3UTR CAA 90 bp AGCTTGGCCATATACTTCTTGCATGTGGCAGCTTCCAAAGGCAGGGCCAATGGGAAGGAGTTCTCCTCCTaGTGCCCACATCTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SLAIYFLHVAASKGRANGKEFSS*CPHLSR
Trigger: TCTGCTTAGATGTGGGCACAAGGAGGAGAACTCCTT...CCCATTGGCCCTGCCTTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS-3UTR CAA 90 bp GGCACCCACACTGCCAATGTTGTTCCCCACCAGGCTGAGCCACCTCAAGCTCTGTGTCATCATCACATATaGAAATTAAGGCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GTHTANVVPHQAEPPQALCHHHI*KLRPRR
Trigger: CCTTCTGGGCCTTAATTTCAATATGTGATGATGACA...CAGAGCTTGAGGTGGCTCAGCCTGGTGGGGAACAACATTGGCAGTGTGGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS TCA 90 bp ACTTCAGTTACTACAACTTCAAAGACACCATTGTCCTCCCCAAGGTaGGGCCCATGTAGAGAAAGGATCACTTCCTTGCGCGAGCCGCCT +
Preference number: 5 (lower is better)
Translates to: TSVTTTSKTPLSSPR*GPCRERITSLREPP
Trigger: AGGCGGCTCGCGCAAGGAAGTGATCCTTTCTCTACATGGGCCTCACCTTGGGGAGGACAATGGTGTCTTTGAAGTTGTAGTAACTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531674.1
CDS GCA 90 bp GAGACTGAGCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTTaGATGTGGCAGCTGAGTTTGAAAACCTGGGTCCACCATACACTT +
Preference number: 5 (lower is better)
Translates to: ETEQTPWSSAWPYTS*MWQLSLKTWVHHTL
Trigger: AAGTGTATGGTGGACCCAGGTTTTCAAACTCAGCTGCCACATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526417.6
CDS-3UTR CAA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGACCGTGGTCCTCAGCTaGGCCATATACTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWTVVLS*AIYFLH
Trigger: ATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGT...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTCGCACAGAGAGTGGTTaGGCCATGCACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPRTESG*AMHCSC
Trigger: GCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCG...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGGCATTCTTCAGCAGGTaGCCCTGCAGAAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NPIQCYANGLLCVLLSERAFFSR*PCRRLK
Trigger: CTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGC...CCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGTGTTCAGAGAAGCCCTaGAGGTTGAACTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLCSEKP*RLNSVR
Trigger: CCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACA...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGCGCAAATACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: EFSSQASTRSLVRPFEILRKYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTATTTGCG...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000647318.2
CDS-3UTR CAA 90 bp CCTCCTGATCTGCTGTATCAGAAACAATGGTCTGGGCAGAACAGGGCACCAATCAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 5 (lower is better)
Translates to: PPDLLYQKQWSGQNRAPIRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...GATTGGTGCCCTGTTCTGCCCAGACCATTGTTTCTGATACAGCAGATCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTCAGGGTTTCTCCATGTaGGTCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPQGFSM*VRLVSN
Trigger: GTTTGAGACCAACCTGACCAACATGGAGAAACCCTG...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCAGACAACGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPDNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCGTTGTC...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCATTGGCCATATACTTCTaGCATGTGGCAGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPLAIYF*HVAASK
Trigger: TTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAA...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCTTGGCCATATACTTCTaGCATGTGGCAGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ANGLLCVLLSERRLNTTFLAIYF*HVAASK
Trigger: TTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAA...GAAGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp ATGCAAATGGGCTGCTGTGTGTACTCCTCAGCGAAAGGAGACTCAACACCACCTTCCGTGAACCTGAACTaGAACTCGTCAAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: MQMGCCVYSSAKGDSTPPSVNLN*NSSKPS
Trigger: TGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGA...AGGTGGTGTTGAGTCTCCTTTCGCTGAGGAGTACACACAGCAGCCCATTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp GTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGTCCGTGAACCTGAACTaGAACTCGTCAAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: VPYYGGGAVLVHPGIESWSVNLN*NSSKPS
Trigger: TGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGA...CCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTGAGAAGCCCTTGAGGTaGAACTCGGTGCGGATGTAC +
Preference number: 5 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSEKPLR*NSVRMY
Trigger: GTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTC...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATAGTTCCTGGTGGCATTaGGACACCATCCATGAGAAG +
Preference number: 5 (lower is better)
Translates to: GMAWMDESRHGESCFLNYSSWWH*DTIHEK
Trigger: CTTCTCATGGATGGTGTCCAAATGCCACCAGGAACT...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGCCTGGCCTGCCACAATaGAAGAGGTGTCTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLPGLPQ*KRCLSK
Trigger: TTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGG...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACCGCAAATACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: GTASCGSISEVCCQSSVHRKYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTATTTGCG...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000647318.2
CDS-3UTR CAA 90 bp TCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACCCACCTCGGTCTGAGATATaGTTATCGCGCAAATACAGA +
Preference number: 5 (lower is better)
Translates to: SPPKGTQLTSTSMGPTDPPRSEI*LSRKYR
Trigger: TCTGTATTTGCGCGATAACAATATCTCAGACCGAGG...TGGGTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000647318.2
CDS-3UTR CAA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTAACTGCAAGGAGGTGTaGCCTCGGAGCCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSNCKEV*PRSPSA
Trigger: GGCCGAGGGGCTCCGAGGCAACACCTCCTTGCAGTT...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATATGGCAAAAGTAGGCTaGGGAAAAGTCTATCCTGGA +
Preference number: 5 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNMAKVG*GKVYPG
Trigger: TCCAGGATAGACTTTTCCCAAGCCTACTTTTGCCAT...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGGCTGCTCGCTGTGGAGAGCCAGCCATAAGTAAACCTTCTCCATCCTTCTGTATGGCAAAAGTAGGCTaGGGAAAAGTCTATCCTGGA +
Preference number: 5 (lower is better)
Translates to: EAARCGEPAISKPSPSFCMAKVG*GKVYPG
Trigger: TCCAGGATAGACTTTTCCCAAGCCTACTTTTGCCAT...ACAGAAGGATGGAGAAGGTTTACTTATGGCTGGCTCTCCACAGCGAGCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 5 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSEEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 90 bp CTCGCAGTGAAGAGCACATTCAATGAGCTTGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAAATACAGAGCCTTGCAGACACCAAG +
Preference number: 5 (lower is better)
Translates to: LAVKSTFNELADASV*DIVIAQIQSLADTK
Trigger: CTTGGTGTCTGCAAGGCTCTGTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTTCACTGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000534057.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCACTGGAAGATGTCTTCTaGACCAACATCAGGCCAACA +
Preference number: 5 (lower is better)
Translates to: EGLSLYILGLNLGKKSMALEDVF*TNIRPT
Trigger: TGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCAG...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTCTGGAAGATGTCTTCTaGACCAACATCAGGCCAACA +
Preference number: 5 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGLEDVF*TNIRPT
Trigger: TGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCAG...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp CTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTTGTTCAGAGAAGCCCTaGAGGTTGAACTCGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LFQKSVVRVQFTGINQKPCSEKP*RLNSVR
Trigger: CCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACA...AGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCTGAAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGACCTGGCCTGCCACAATaGAAGAGGTGTCTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVRPGLPQ*KRCLSK
Trigger: TTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGG...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCTGGCCATTGGTGAGTaGCCTGGCCTGCCACAATTG +
Preference number: 5 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVLAIGE*PGLPQL
Trigger: CAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGCCAGTCCCATACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCAGCCGTCAGTCAATTaGTTGTTGAATAGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: GQSHTMEEGLSLYILGLNQPSVN*LLNRAN
Trigger: GTTAGCTCTATTCAACAACAAATTGACTGACGGCTG...ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGTATGGGACTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTTTTGTGAGAGAGGAGGGGCTGTCCTaGTACATCCTGGGATTGAAT +
Preference number: 5 (lower is better)
Translates to: CVLCTPLHQSSGKGSFVREEGLS*YILGLN
Trigger: ATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTC...TCTCACAAAAGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCCATGTTGGTCAGGTTGGTCTCAAACCCCCAACCTCAGGTGATCTGCCCACCTAGGAAGACATTTGCTTaGAAGGAACGGCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: SMLVRLVSNPQPQVICPPRKTFA*KERPNF
Trigger: AAAATTAGGCCGTTCCTTCAAAGCAAATGTCTTCCT...AGGTGGGCAGATCACCTGAGGTTGGGGGTTTGAGACCAACCTGACCAACATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp AGAAGTCTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGGCCTTTTCACATGTGTaGCAGCCTTTTAGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RSLLSEFSSQASTRSLVRAFSHV*QPFRLG
Trigger: ACCCAGCCTAAAAGGCTGCAACACATGTGAAAAGGC...CCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAGACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp CAACCTCCTCTAGAGAGAAAGTGTTCCCTCGGAGCCAGACTTCCAGGATGGTGTCCATGCCTGGCCTCATaGCTGAATGAATTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: QPPLERKCSLGARLPGWCPCLAS*LNEFKD
Trigger: ATCTTTAAATTCATTCAGCAATGAGGCCAGGCATGG...ACACCATCCTGGAAGTCTGGCTCCGAGGGAACACTTTCTCTCTAGAGGAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS TCA 90 bp CCAGCGCTAACTTCTGCAATTGCTCGCAGTGAAGAGCACATTCAATaGGCTTGCAGATGCCTCGGTCTGAGATATTGTTATCGCGCAAAT +
Preference number: 5 (lower is better)
Translates to: PALTSAIARSEEHIQ*ACRCLGLRYCYRAN
Trigger: ATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTTCACTGCGAGCAATTGCAGAAGTTAGCGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534057.1
CDS-3UTR CAA 90 bp ACTATGGAGGAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTTGGCCATATACTTCTaGCATGTGGCAGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TMEEGLSLYILGLNLGKKLAIYF*HVAASK
Trigger: TTTGGAAGCTGCCACATGCAAGAAGTATATGGCCAA...CTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTCCTCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CCTGAATTATGTGTTCTGTGTACTCCTCTTCATCAGAGCAGTGGTAAGGGGTCTACCGTGGTCCTCAGCTaGGCCATATACTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: PELCVLCTPLHQSSGKGSTVVLS*AIYFLH
Trigger: ATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGT...AGACCCCTTACCACTGCTCTGATGAAGAGGAGTACACAGAACACATAATTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTCTGGAAGATGTCTTCTaGACCAACATCAGGCCAACA +
Preference number: 5 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSLEDVF*TNIRPT
Trigger: TGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCAG...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTTCCGTGAACCTGAACTaGAACTCGTCAAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSSVNLN*NSSKPS
Trigger: TGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGA...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGTCCGTGAACCTGAACTaGAACTCGTCAAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: EFSSQASTRSLVRPFEILSVNLN*NSSKPS
Trigger: TGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGA...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GACAAACTGACAACCCAATACAGTGCTATGCAAATGGGCTGCTGTGTGTACTCCCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: DKLTTQYSAMQMGCCVYSLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...GGAGTACACACAGCAGCCCATTTGCATAGCACTGTATTGGGTTGTCAGTTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp GCCTCTCCACCAAAAGGCACTCAGTTAACAAGCACATCCATGGGCCCCACTGACTCAGTCAATTTGTTGTaGAATAGAGCTAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: ASPPKGTQLTSTSMGPTDSVNLL*NRANFC
Trigger: GCAGAAGTTAGCTCTATTCAACAACAAATTGACTGA...GTCAGTGGGGCCCATGGATGTGCTTGTTAACTGAGTGCCTTTTGGTGGAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSYFRSL*SEFSSQ
Trigger: CTGTGAACTGAACTCTGACAACAGACTTCTGAAATA...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AAAAGTAGGCTTGGGAAAAGTCTATCCTGGAGGGCACTGATGCTCCCTCCTCTGAAATGGAACTGCCTCTaGTGGGTCTATTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: KSRLGKSLSWRALMLPPLKWNCL*WVYFRS
Trigger: ACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTT...CAGAGGAGGGAGCATCAGTGCCCTCCAGGATAGACTTTTCCCAAGCCTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTGAGAAGCCCTTGAGGTaGAACTCGGTGCGGATGTAC +
Preference number: 5 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFEKPLR*NSVRMY
Trigger: GTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTC...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TCATATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGCCTGGCCTGCCACAATaGAAGAGGTGTCTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SYFSCKPRMSWGTNGCHVPGLPQ*KRCLSK
Trigger: TTTGCTCAGACACCTCTTCAATTGTGGCAGGCCAGG...CACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAATATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCCTGCAAAATGTCAACTaGAGGTGCCCAACATTCAGG +
Preference number: 5 (lower is better)
Translates to: IFLANLECLGEQTAVTCPLQNVN*RCPTFR
Trigger: CCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAG...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCACAGCCGTCAGTCAATTaGTTGTTGAATAGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAQPSVN*LLNRAN
Trigger: GTTAGCTCTATTCAACAACAAATTGACTGACGGCTG...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTGAAATTCTGATGGCAAAAGTAGGCTaGGGAAAAGTCTATCCTGGA +
Preference number: 5 (lower is better)
Translates to: EFSSQASTRSLVRPFEILMAKVG*GKVYPG
Trigger: TCCAGGATAGACTTTTCCCAAGCCTACTTTTGCCAT...CAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CAGAACAGGGCACCAATCACAAAGAAAACCCATAGACACACTCCCATGCAGGGTAAATGGAACTGCCTCTaGTGGGTCTATTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: QNRAPITKKTHRHTPMQGKWNCL*WVYFRS
Trigger: ACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTT...ACCCTGCATGGGAGTGTGTCTATGGGTTTTCTTTGTGATTGGTGCCCTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTGACAACTACAGAGCCTaGCAGACACCAAGGCAAGGC +
Preference number: 5 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFDNYRA*QTPRQG
Trigger: GCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTTGTC...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641284.1
CDS-3UTR CAA 90 bp TCTGGGGCCCAAACTCACAGCCTGCTCACAAACAAACTGAGACGAACATCCTCCCTATACATTATCGGGTaGAAAACATCATTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SGAQTHSLLTNKLRRTSSLYIIG*KTSFSS
Trigger: GGAGGAAAATGATGTTTTCAACCCGATAATGTATAG...GGAGGATGTTCGTCTCAGTTTGTTTGTGAGCAGGCTGTGAGTTTGGGCCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAACGCACAGAGAGTGGTTaGGCCATGCACTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKRTESG*AMHCSC
Trigger: GCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCG...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTCCGTCAGTCAATTTGTaGTTGAATAGAGCTAACTTC +
Preference number: 5 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFPSVNL*LNRANF
Trigger: GAAGTTAGCTCTATTCAACAACAAATTGACTGACGG...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCACCGTCAGTCAATTTGTaGTTGAATAGAGCTAACTTC +
Preference number: 5 (lower is better)
Translates to: EGLSLYILGLNLGKKSMAPSVNL*LNRANF
Trigger: GAAGTTAGCTCTATTCAACAACAAATTGACTGACGG...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GTCACTAATATTCTGAATTTCAGCCTCAGAGGAAGGAGCGTGTGCAGGAGTCCACAGCCGTCAGTCAATTaGTTGTTGAATAGAGCTAAC +
Preference number: 5 (lower is better)
Translates to: VTNILNFSLRGRSVCRSPQPSVN*LLNRAN
Trigger: GTTAGCTCTATTCAACAACAAATTGACTGACGGCTG...TGGACTCCTGCACACGCTCCTTCCTCTGAGGCTGAAATTCAGAATATTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGAATGGCCTGGATGGATGAGTCGAGACATGGGGAAAGCTGCTTCCTGAATTATTATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: GMAWMDESRHGESCFLNYYFRSL*SEFSSQ
Trigger: CTGTGAACTGAACTCTGACAACAGACTTCTGAAATA...ATAATTCAGGAAGCAGCTTTCCCCATGTCTCGACTCATCCATCCAGGCCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTGTTGTCAGAGTTCAGTTCACAGGCATCAACCAGAAGCCTAGTGAGGCCGTTTAGGAAGACATTTGCTTaGAAGGAACGGCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: LLSEFSSQASTRSLVRPFRKTFA*KERPNF
Trigger: AAAATTAGGCCGTTCCTTCAAAGCAAATGTCTTCCT...AAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTGAACTGAACTCTGACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GAGGGGCTGTCCTTGTACATCCTGGGATTGAATCTTGGGAAGAAGTCAATGGCATCAGTCAATTTGTTGTaGAATAGAGCTAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: EGLSLYILGLNLGKKSMASVNLL*NRANFC
Trigger: GCAGAAGTTAGCTCTATTCAACAACAAATTGACTGA...TGCCATTGACTTCTTCCCAAGATTCAATCCCAGGATGTACAAGGACAGCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp GGAACTGCCTCTTGTGGGTCTATTTCAGAAGTCTGTTGTCAGAGTTCAGTTCACTTGTACATCCTGGGATaGAATCTTGGGAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GTASCGSISEVCCQSSVHLYILG*NLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAA...GTGAACTGAACTCTGACAACAGACTTCTGAAATAGACCCACAAGAGGCAGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ATTTTTCTTGCAAACCTAGAATGTCTTGGGGAACAAACGGCTGTCACGTGTCCCTTGTACATCCTGGGATaGAATCTTGGGAAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: IFLANLECLGEQTAVTCPLYILG*NLGKKS
Trigger: TGACTTCTTCCCAAGATTCAATCCCAGGATGTACAA...GGGACACGTGACAGCCGTTTGTTCCCCAAGACATTCTAGGTTTGCAAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp TGCCACACCACCGAGTCAGCCAGACGCAAAACCTTTCAAGGAAGTAGGATTTTATATTTCAGAAGTCTGTaGTCAGAGTTCAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: CHTTESARRKTFQGSRILYFRSL*SEFSSQ
Trigger: CTGTGAACTGAACTCTGACAACAGACTTCTGAAATA...TAAAATCCTACTTCCTTGAAAGGTTTTGCGTCTGGCTGACTCGGTGGTGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp AGGAGACTCAACACCACCTTCCTCCTGATCTGCTGTATCAGAAACAATGGTCTGAGGAAGACATTTGCTTaGAAGGAACGGCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: RRLNTTFLLICCIRNNGLRKTFA*KERPNF
Trigger: AAAATTAGGCCGTTCCTTCAAAGCAAATGTCTTCCT...CAGACCATTGTTTCTGATACAGCAGATCAGGAGGAAGGTGGTGTTGAGTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TGCTCCCTCCTCTGCCAGAATAAAGGTGACCTATGGTGTTCCCAGAAAACAAGTAGGAAGACATTTGCTTaGAAGGAACGGCCTAATTTT +
Preference number: 5 (lower is better)
Translates to: CSLLCQNKGDLWCSQKTSRKTFA*KERPNF
Trigger: AAAATTAGGCCGTTCCTTCAAAGCAAATGTCTTCCT...ACTTGTTTTCTGGGAACACCATAGGTCACCTTTATTCTGGCAGAGGAGGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGCCTCGGTCTGAGATATaGTTATCGCGCAAATACAGA +
Preference number: 5 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKPRSEI*LSRKYR
Trigger: TCTGTATTTGCGCGATAACAATATCTCAGACCGAGG...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000647318.2
CDS-3UTR CAA 90 bp TTCCCCTCTGATTATTTACAGCATAAAGTTCACGGCCATGTTGTCTATAAGAGTAGGACAGGGCTCATTTaGAAGAGGCTGCCAACACAT +
Preference number: 5 (lower is better)
Translates to: FPSDYLQHKVHGHVVYKSRTGLI*KRLPTH
Trigger: ATGTGTTGGCAGCCTCTTCAAAATGAGCCCTGTCCT...ACTCTTATAGACAACATGGCCGTGAACTTTATGCTGTAAATAATCAGAGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp CTATGGTGTTCCCAGAAAACAAGTTCAGCCTTAGGCAGGACAGGGCTCATTTTGCTATACATTATCGGGTaGAAAACATCATTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LWCSQKTSSALGRTGLILLYIIG*KTSFSS
Trigger: GGAGGAAAATGATGTTTTCAACCCGATAATGTATAG...CAAAATGAGCCCTGTCCTGCCTAAGGCTGAACTTGTTTTCTGGGAACACCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAGCACATTCAATGAGCTaGCAGATGCCTCGGTCTGAG +
Preference number: 5 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKAHSMS*QMPRSE
Trigger: CTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGC...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp AAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTCAGAAGCCGTCAGTCAATTTGTaGTTGAATAGAGCTAACTTC +
Preference number: 5 (lower is better)
Translates to: KHSGTNEMELPLVGLFQKPSVNL*LNRANF
Trigger: GAAGTTAGCTCTATTCAACAACAAATTGACTGACGG...CTTCTGAAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000646677.1
ENST00000647318.2
CDS-3UTR CAA 90 bp ATCCTAAAGCATTCTGGCACAAATGAAATGGAACTGCCTCTTGTGGGTCTATTTGAAGCCAAAAGTGTTTaGATTGCCTGGCTATTTTCT +
Preference number: 5 (lower is better)
Translates to: ILKHSGTNEMELPLVGLFEAKSV*IAWLFS
Trigger: AGAAAATAGCCAGGCAATCAAAACACTTTTGGCTTC...AAATAGACCCACAAGAGGCAGTTCCATTTCATTTGTGCCAGAATGCTTTAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641284.1
ENST00000646677.1
CDS-3UTR CAA 90 bp TTTCCTGTAAACTTTCAATCCATAACTGTACATCCTAAAGCATTCTGGCACAAAAAATGGAACTGCCTCTaGTGGGTCTATTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: FPVNFQSITVHPKAFWHKKWNCL*WVYFRS
Trigger: ACTTCTGAAATAGACCCACAAGAGGCAGTTCCATTT...TTTGTGCCAGAATGCTTTAGGATGTACAGTTATGGATTGAAAGTTTACAGGAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp CAGCTGGCGGGATGGAGTGGAAGTGCTTGCGGAGGCTaGGGGCCAGACACCAGCGGGCACAGGCCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: QLAGWSGSACGG*GPDTSGHRPGA
Trigger: GGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp CGGAGGCTGCGGGCCAGACACCAGCGGGCACAGGCCTaGCGCCGGAGCAGGGCCTTCTCAGATGTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: RRLRARHQRAQA*RRSRAFSDVWH
Trigger: GTGCCAGACATCTGAGAAGGCCCTGCTCCGGCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp CTCTTGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTGGAAGTGCTaGCGGAGGCTGCGGGCCAGACACCAGCGGGCACAGGCCTGGCGC +
Preference number: 6 (lower is better)
Translates to: LLASPGAAGGMEWKC*RRLRARHQRAQAWR
Trigger: GCGCCAGGCCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp CACCCGGTGCAGCTGGCGGGATGGAGTGGAAGTGCTTaGGGAGGCTGCGGGCCAGACACCAGCGGGCACAGG +
Preference number: 6 (lower is better)
Translates to: HPVQLAGWSGSA*GGCGPDTSGHR
Trigger: CCTGTGCCCGCTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp CAGGCCTGGCGCCGGAGCAGGGCCTTCTCAGATGTCTaGCACTCAGCCAGCAGGCCCCAGTGCTCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: QAWRRSRAFSDV*HSASRPQCSRD
Trigger: GTCCCGGGAGCACTGGGGCCTGCTGGCTGAGTGCCAGACATCTGAGAAGGCCCTGCTCCGGCGCCAGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp TGCCCTGCAGCCCACAGCAAGTGCAGCCGCTGCAGGAGCGTGCTCTaGCCACTGCCCGCCTCACCCACCACCAGCACAGTGTCCGCATCG +
Preference number: 6 (lower is better)
Translates to: CPAAHSKCSRCRSVL*PLPASPTTSTVSAS
Trigger: CGATGCGGACACTGTGCTGGTGGTGGGTGAGGCGGGCAGTGGCAAGAGCACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGCAGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300589.6
ENST00000526417.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp CCCGGGCATGGCATGCACGCTCTTGGCCTCACCCGGTaGAGCTGGCGGGATGGAGTGGAAGTGCTTGCGGAG +
Preference number: 6 (lower is better)
Translates to: PGHGMHALGLTR*SWRDGVEVLAE
Trigger: CTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp AGGCTCCGGATGAGCCAGATGAACCCGGGCATGGCATaGACGCTCTTGGCCTCACCCGGTGCAGCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: RLRMSQMNPGMA*TLLASPGAAGG
Trigger: CCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTTCATCTGGCTCATCCGGAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp CTCTTGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTaGAAGTGCTTGCGGAGGCTGCGGGCCAGACACCAG +
Preference number: 6 (lower is better)
Translates to: LLASPGAAGGME*KCLRRLRARHQ
Trigger: CTGGTGTCTGGCCCGCAGCCTCCGCAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 72 bp AGCAGGCGGATGAGGCGGTCCGCCACCCCGGGCTCATaGTGGCGCTTCCTCAGGTACAGCTCGATGCCCTGT +
Preference number: 6 (lower is better)
Translates to: SRRMRRSATPGS*WRFLRYSSMPC
Trigger: ACAGGGCATCGAGCTGTACCTGAGGAAGCGCCATCATGAGCCCGGGGTGGCGGACCGCCTCATCCGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp AACGCCGACACAGCGGCCGGACGGCTGGTCACCACCTaGCGGGCATTCTTCAGCAGGTTGCCCTGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: NADTAAGRLVTT*RAFFSRLPCRR
Trigger: CCTTCTGCAGGGCAACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTGTGTCGGCGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp GCGGCCGGACGGCTGGTCACCACCTTGCGGGCATTCTTCAGCAGGTaGCCCTGCAGAAGGTTGAAGAGCAGGGTCTGGACAGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: AAGRLVTTLRAFFSR*PCRRLKSRVWTEVG
Trigger: CCCCACCTCTGTCCAGACCCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp AGGCTCCGGATGAGCCAGATGAACCCGGGCATGGCATGCACGCTCTaGGCCTCACCCGGTGCAGCTGGCGGGATGGAGTGGAAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: RLRMSQMNPGMACTL*ASPGAAGGMEWKCL
Trigger: CAAGCACTTCCACTCCATCCCGCCAGCTGCACCGGGTGAGGCCAAGAGCGTGCATGCCATGCCCGGGTTCATCTGGCTCATCCGGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 72 bp GCTCCCGGGACAACAGCCCTGCCAGGAAGGCTGCTGTaGTCTGAAGGTTGTGCGGCTCGGCCTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: APGTTALPGRLL*SEGCAARPSAA
Trigger: TGCTGCAGAAGGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp TGTGCGGCTCGGCCTTCTGCAGCAAAGCTGCCACGCTaGTGTCCTTTCCCTCCGAGGCCTGGATGCACATCG +
Preference number: 6 (lower is better)
Translates to: CAARPSAAKLPR*CPFPPRPGCTS
Trigger: CGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTTGCTGCAGAAGGCCGAGCCGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp CCAGTGCTCCCGGGACAACAGCCCTGCCAGGAAGGCTaGTGTGATCTGAAGGTTGTGCGGCTCGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: PVLPGQQPCQEG*CDLKVVRLGLL
Trigger: CAGAAGGCCGAGCCGCACAACCTTCAGATCACAGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp TTCTCAGATGTCTGGCACTCAGCCAGCAGGCCCCAGTaGTCCCGGGACAACAGCCCTGCCAGGAAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: FSDVWHSASRPQ*SRDNSPARKAA
Trigger: AGCAGCCTTCCTGGCAGGGCTGTTGTCCCGGGAGCACTGGGGCCTGCTGGCTGAGTGCCAGACATCTGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp AGGCCACGTGCAGCCTTCCGAGCCAGCCGCTCCTCCTaGATCTCGTACAGGCTCCGGATGAGCCAGATGAAC +
Preference number: 6 (lower is better)
Translates to: RPRAAFRASRSS*ISYRLRMSQMN
Trigger: GTTCATCTGGCTCATCCGGAGCCTGTACGAGATGCAGGAGGAGCGGCTGGCTCGGAAGGCTGCACGTGGCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp TGCTGTCCTTTCCCTCCGAGGCCTGGATGCACATCGTaGGCAGGAGCCTGGCCATTGGTGAGTTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: CCPFPPRPGCTS*AGAWPLVSCLA
Trigger: GGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp TTCCTGAGGAACGCCGACACAGCGGCCGGACGGCTGGTCACCACCTaGCGGGCATTCTTCAGCAGGTTGCCCTGCAGAAGGTTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: FLRNADTAAGRLVTT*RAFFSRLPCRRLKS
Trigger: GCTCTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCGTCCGGCCGCTGTGTCGGCGTTCCTCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp AAAGCTGCCACGCTGCTGTCCTTTCCCTCCGAGGCCTaGATGCACATCGTGGGCAGGAGCCTGGCCATTGGT +
Preference number: 6 (lower is better)
Translates to: KAATLLSFPSEA*MHIVGRSLAIG
Trigger: ACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAGGCCTCGGAGGGAAAGGACAGCAGCGTGGCAGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp TCAGCCAGGGCCTGGGCCCCCTCGTCACCCACTCTGTaGCCCCAGAATTACAGAGCCTTGCAGACACCAAGG +
Preference number: 6 (lower is better)
Translates to: SARAWAPSSPTL*PQNYRALQTPR
Trigger: CCTTGGTGTCTGCAAGGCTCTGTAATTCTGGGGCAACAGAGTGGGTGACGAGGGGGCCCAGGCCCTGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527052.5
CDS TCA 72 bp CTGACCCCAGGCCTGGGAGCATGTCGCGGCCAAGGATaGAAGAAGGCTGAGGATCAAGCTGGGACGGGACAA +
Preference number: 6 (lower is better)
Translates to: LTPGLGACRGQG*KKAEDQAGTGQ
Trigger: TTGTCCCGTCCCAGCTTGATCCTCAGCCTTCTTTCATCCTTGGCCGCGACATGCTCCCAGGCCTGGGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS CCA 72 bp CCCCCATCAAAGCCCATTAGGCTGGGGGAGCAGGCATaGCATCTGCGGGTAGGCCTTGTGCAGAACGCCAAA +
Preference number: 6 (lower is better)
Translates to: PPSKPIRLGEQA*HLRVGLVQNAK
Trigger: TTTGGCGTTCTGCACAAGGCCTACCCGCAGATGCCATGCCTGCTCCCCCAGCCTAATGGGCTTTGATGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000527070.5
ENST00000532206.1
CDS TCA 72 bp GGAGCCCCTCGGCCAGCACTTGGGCTCCCGCGGCAGTaGTGTAGTTATTCCCCAGCGCTAACTTCTGCAATT +
Preference number: 6 (lower is better)
Translates to: GAPRPALGLPRQ*CSYSPALTSAI
Trigger: AATTGCAGAAGTTAGCGCTGGGGAATAACTACATCACTGCCGCGGGAGCCCAAGTGCTGGCCGAGGGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534057.1
CDS CCA 72 bp AGTGATGTGAAGGAATTCCAGGGGCGCCGTACTCCCTaGCACGACACCTTTGGCACGCACCAGGAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: SDVKEFQGRRTP*HDTFGTHQEAK
Trigger: CTTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAGGGAGTACGGCGCCCCTGGAATTCCTTCACATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp CGGCTGGTCACCACCTTGCGGGCATTCTTCAGCAGGTaGCCCTGCAGAAGGTTGAAGAGCAGGGTCTGGACA +
Preference number: 6 (lower is better)
Translates to: RLVTTLRAFFSR*PCRRLKSRVWT
Trigger: TGTCCAGACCCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGCCCGCAAGGTGGTGACCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp CTGCCGGCAGCTGAATGGGAAGACAAAGAGAAATTCCTGGAAGTCTaGCCCTGCAGCCCACAGCAAGTGCAGCCGCTGCAGGAGCGTGCT +
Preference number: 6 (lower is better)
Translates to: LPAAEWEDKEKFLEV*PCSPQQVQPLQERA
Trigger: AGCACGCTCCTGCAGCGGCTGCACTTGCTGTGGGCTGCAGGGCAAGACTTCCAGGAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300589.6
ENST00000526417.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp TGGCGCTTCCTCAGGTACAGCTCGATGCCCTGTTCAGAGAAGCCCTaGAGGTTGAACTCGGTGCGGATGTACTTCCTGAGGAACGCCGAC +
Preference number: 6 (lower is better)
Translates to: WRFLRYSSMPCSEKP*RLNSVRMYFLRNAD
Trigger: GTCGGCGTTCCTCAGGAAGTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACAGGGCATCGAGCTGTACCTGAGGAAGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 72 bp CTGGATGCACATCGTGGGCAGGAGCCTGGCCATTGGTaGGTTGCCTGGCCTGCCACAATTGAAGAGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LDAHRGQEPGHW*VAWPATIEEVS
Trigger: AGACACCTCTTCAATTGTGGCAGGCCAGGCAACTCACCAATGGCCAGGCTCCTGCCCACGATGTGCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp GTCACCACCTTGCGGGCATTCTTCAGCAGGTTGCCCTaGAGAAGGTTGAAGAGCAGGGTCTGGACAGAGGTG +
Preference number: 6 (lower is better)
Translates to: VTTLRAFFSRLP*RRLKSRVWTEV
Trigger: CACCTCTGTCCAGACCCTGCTCTTCAACCTTCTGCAGGGCAACCTGCTGAAGAATGCCCGCAAGGTGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp TCAGTGGGGCCCACACTGCAAAATGTCAACTTGAGGTaGCCAACATTCAGGCCACGTGCAGCCTTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: SVGPTLQNVNLR*PTFRPRAAFRA
Trigger: GGCTCGGAAGGCTGCACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAGTGTGGGCCCCACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp AGAAGGCTGAGGATCAAGCTGGGACGGGACAATGCCTaGTCCTCTTACCCGGAGAATGTCCGAGGAGGACAC +
Preference number: 6 (lower is better)
Translates to: RRLRIKLGRDNA*SSYPENVRGGH
Trigger: GTGTCCTCCTCGGACATTCTCCGGGTAAGAGGAGCAGGCATTGTCCCGTCCCAGCTTGATCCTCAGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS CCA 72 bp ATTCCAGGGGCGCCGTACTCCCTGGCACGACACCTTTaGCACGCACCAGGAAGCCAAGAGAAATGTCATCAG +
Preference number: 6 (lower is better)
Translates to: IPGAPYSLARHL*HAPGSQEKCHQ
Trigger: CTGATGACATTTCTCTTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAGGGAGTACGGCGCCCCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp CAGTGCTCAAAGAGTAGAGTCCGCACAGAGAGTGGTTaGGCCATGCACTGCAGCTGCCGGCAGCTGAATGGG +
Preference number: 6 (lower is better)
Translates to: QCSKSRVRTESG*AMHCSCRQLNG
Trigger: CCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCGGACTCTACTCTTTGAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp GGCCAACAGCAGTGCTCAAAGAGTAGAGTCCGCACAGAGAGTGGTTaGGCCATGCACTGCAGCTGCCGGCAGCTGAATGGGAAGACAAAG +
Preference number: 6 (lower is better)
Translates to: GQQQCSKSRVRTESG*AMHCSCRQLNGKTK
Trigger: CTTTGTCTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCGGACTCTACTCTTTGAGCACTGCTGTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp GGGTCGGTCGGGGAGCAGTGGCGTTCACGATCCGTGAACCTGAACTaGAACTCGTCAAAGCCATCAAAGGTTAACAGGACACGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: GSVGEQWRSRSVNLN*NSSKPSKVNRTRSG
Trigger: CCCTGACCGTGTCCTGTTAACCTTTGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGATCGTGAACGCCACTGCTCCCCGACCGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp TTCCTCAGGTACAGCTCGATGCCCTGTTCAGAGAAGCCCTTGAGGTaGAACTCGGTGCGGATGTACTTCCTGAGGAACGCCGACACAGCG +
Preference number: 6 (lower is better)
Translates to: FLRYSSMPCSEKPLR*NSVRMYFLRNADTA
Trigger: CGCTGTGTCGGCGTTCCTCAGGAAGTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACAGGGCATCGAGCTGTACCTGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp GACAATGCCTGCTCCTCTTACCCGGAGAATGTCCGAGGAGGACACTaGCTCTTTCCTCCTCATCGTGAGAGGCTGAACCACCCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: DNACSSYPENVRGGH*LFPPHRERLNHPLP
Trigger: GGGAAGAGGGTGGTTCAGCCTCTCACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGACATTCTCCGGGTAAGAGGAGCAGGCATTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS TCA 72 bp TGTCCGAGGAGGACACTTGCTCTTTCCTCCTCATCGTaGGAGGCTGAACCACCCTCTTCCCCCATCAAAGCC +
Preference number: 6 (lower is better)
Translates to: CPRRTLALSSSS*EAEPPSSPIKA
Trigger: GGCTTTGATGGGGGAAGAGGGTGGTTCAGCCTCTCACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000527070.5
ENST00000532206.1
CDS TCA 72 bp CAGCAACAGTTCCTGGTGGCATTTGGACACCATCCATaGGAAGACAGGCAGGTGGCACAAACCGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QQQFLVAFGHHP*EDRQVAQTVQG
Trigger: GCCCTGCACGGTTTGTGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAATGCCACCAGGAACTGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 72 bp CACACTCAGTGGGGCCCACACTGCAAAATGTCAACTTaGGGTGCCCAACATTCAGGCCACGTGCAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: HTQWGPHCKMST*GAQHSGHVQPS
Trigger: GGAAGGCTGCACGTGGCCTGAATGTTGGGCACCTCAAGTTGACATTTTGCAGTGTGGGCCCCACTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp GAACAGCAATGCCCAGTAACACTCACTACAGAGCCTTaGAGACACCAAGGCAAGGCAGCAGCTGCTCCACGC +
Preference number: 6 (lower is better)
Translates to: EQQCPVTLTTEP*RHQGKAAAAPR
Trigger: GCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGTGAGTGTTACTGGGCATTGCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524712.5
ENST00000529633.5
ENST00000534067.5
CDS CCA 72 bp TGGCATTTGGACACCATCCATGAGAAGACAGGCAGGTaGCACAAACCGTGCAGGGCTGAGGTCTCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: WHLDTIHEKTGR*HKPCRAEVSWS
Trigger: GCTCCAAGAGACCTCAGCCCTGCACGGTTTGTGCCACCTGCCTGTCTTCTCATGGATGGTGTCCAAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp CCTGCCACAATTGAAGAGGTGTCTGAGCAAAGCTGGTaGCACATCAGCACTGAGTGCCAGGTAGAACGCGGC +
Preference number: 6 (lower is better)
Translates to: PATIEEVSEQSW*HISTECQVERG
Trigger: GCCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACACCTCTTCAATTGTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CCA 72 bp GGAAGCGAGACTGAGCAGACACCGTGGTCCTCAGCTTaGCCATATACTTCTTGCATGTGGCAGCCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: GSETEQTPWSSA*PYTSCMWQPLG
Trigger: TCCCAGAGGCTGCCACATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGCTCAGTCTCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532206.1
CDS CAA 72 bp AATTCCAGGGGCGCCGTACTCCCTGGCACGACACCTTaGGCACGCACCAGGAAGCCAAGAGAAATGTCATCA +
Preference number: 6 (lower is better)
Translates to: NSRGAVLPGTTP*ARTRKPREMSS
Trigger: TGATGACATTTCTCTTGGCTTCCTGGTGCGTGCCAAAGGTGTCGTGCCAGGGAGTACGGCGCCCCTGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 72 bp GAGGACACTTGCTCTTTCCTCCTCATCGTGAGAGGCTaGACCACCCTCTTCCCCCATCAAAGCCCATTAGGC +
Preference number: 6 (lower is better)
Translates to: EDTCSFLLIVRG*TTLFPHQSPLG
Trigger: GCCTAATGGGCTTTGATGGGGGAAGAGGGTGGTTCAGCCTCTCACGATGAGGAGGAAAGAGCAAGTGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000527070.5
ENST00000532206.1
CDS TCA 72 bp CAAGGGCCTGCAGGAGGGCTTCTGCCCCTAGGTAGGTaGTGCAGTTATTGGACAACTACAGAGCCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: QGPAGGLLPLGR*CSYWTTTEPCR
Trigger: TCTGCAAGGCTCTGTAGTTGTCCAATAACTGCATCACCTACCTAGGGGCAGAAGCCCTCCTGCAGGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641284.1
CDS GCA 72 bp GTCCGCACAGAGAGTGGTTTGGCCATGCACTGCAGCTaGCGGCAGCTGAATGGGAAGACAAAGAGAAATTCC +
Preference number: 6 (lower is better)
Translates to: VRTESGLAMHCS*RQLNGKTKRNS
Trigger: GGAATTTCTCTTTGTCTTCCCATTCAGCTGCCGGCAGCTGCAGTGCATGGCCAAACCACTCTCTGTGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300589.6
ENST00000526417.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS GCA 72 bp ACCATCCTGGTTAACACAGTGAAACCTACAGAGCCTTaGAGACACCAAGGCAAGGCAGCAGCTGCTCCACGC +
Preference number: 6 (lower is better)
Translates to: TILVNTVKPTEP*RHQGKAAAAPR
Trigger: GCGTGGAGCAGCTGCTGCCTTGCCTTGGTGTCTGCAAGGCTCTGTAGGTTTCACTGTGTTAACCAGGATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646677.1
CDS CCA 72 bp TGGCCTGCCACAATTGAAGAGGTGTCTGAGCAAAGCTaGTGGCACATCAGCACTGAGTGCCAGGTAGAACGC +
Preference number: 6 (lower is better)
Translates to: WPATIEEVSEQS*WHISTECQVER
Trigger: GCGTTCTACCTGGCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACACCTCTTCAATTGTGGCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp TACAGCTCGATGCCCTGTTCAGAGAAGCCCTTGAGGTaGAACTCGGTGCGGATGTACTTCCTGAGGAACGCC +
Preference number: 6 (lower is better)
Translates to: YSSMPCSEKPLR*NSVRMYFLRNA
Trigger: GGCGTTCCTCAGGAAGTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACAGGGCATCGAGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp CTCAGGTACAGCTCGATGCCCTGTTCAGAGAAGCCCTaGAGGTTGAACTCGGTGCGGATGTACTTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: LRYSSMPCSEKP*RLNSVRMYFLR
Trigger: CCTCAGGAAGTACATCCGCACCGAGTTCAACCTCAAGGGCTTCTCTGAACAGGGCATCGAGCTGTACCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp TGCTCCTCTTACCCGGAGAATGTCCGAGGAGGACACTaGCTCTTTCCTCCTCATCGTGAGAGGCTGAACCAC +
Preference number: 6 (lower is better)
Translates to: CSSYPENVRGGH*LFPPHRERLNH
Trigger: GTGGTTCAGCCTCTCACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGACATTCTCCGGGTAAGAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527070.5
CDS TCA 72 bp CTCCCACACTTAGCCTTGATGGTGCTCCCCCATACCTaGACAGCAATGCCCAGTAACACTCACTACAGAGCC +
Preference number: 6 (lower is better)
Translates to: LPHLALMVLPHT*TAMPSNTHYRA
Trigger: GGCTCTGTAGTGAGTGTTACTGGGCATTGCTGTTCAGGTATGGGGGAGCACCATCAAGGCTAAGTGTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534067.5
CDS GCA 72 bp GTGTCTGAGCAAAGCTGGTGGCACATCAGCACTGAGTaGCAGGTAGAACGCGGCAAAGAAGCACTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: VSEQSWWHISTE*QVERGKEALES
Trigger: ACTTTCCAGTGCTTCTTTGCCGCGTTCTACCTGGCACTCAGTGCTGATGTGCCACCAGCTTTGCTCAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 72 bp ACATTTCACAACCCGGAGAATGTCCGAGGAGGACACTaGCTCTTTCCTCCTCATCGTGAGAGGCTGAACCAC +
Preference number: 6 (lower is better)
Translates to: TFHNPENVRGGH*LFPPHRERLNH
Trigger: GTGGTTCAGCCTCTCACGATGAGGAGGAAAGAGCAAGTGTCCTCCTCGGACATTCTCCGGGTTGTGAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300589.6
ENST00000532206.1
CDS CAA 72 bp GCAGACACCGTGGTCCTCAGCTTGGCCATATACTTCTaGCATGTGGCAGCTGAGTTTGAAAACCTGGGTCCA +
Preference number: 6 (lower is better)
Translates to: ADTVVLSLAIYF*HVAAEFENLGP
Trigger: TGGACCCAGGTTTTCAAACTCAGCTGCCACATGCAAGAAGTATATGGCCAAGCTGAGGACCACGGTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526417.6
CDS CAA 72 bp GGGGAGCAGTGGCGTTCACGATCCGTGAACCTGAACTaGAACTCGTCAAAGCCATCAAAGGTTAACAGGACA +
Preference number: 6 (lower is better)
Translates to: GEQWRSRSVNLN*NSSKPSKVNRT
Trigger: TGTCCTGTTAACCTTTGATGGCTTTGACGAGTTCAAGTTCAGGTTCACGGATCGTGAACGCCACTGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS TCA 72 bp ACTACAACTTCAAAGACACCATTGTCCTCCCCAAGGTaGGGCCCATGTAGAGAAAGGATCACTTCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: TTTSKTPLSSPR*GPCRERITSLR
Trigger: GCGCAAGGAAGTGATCCTTTCTCTACATGGGCCTCACCTTGGGGAGGACAATGGTGTCTTTGAAGTTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531674.1
CDS TCA 72 bp TCAGGGTGGTCAAGGAGTAACTGGAAGATGTCTTCTTaGCCAACATCAGGCCAACAGCAGTGCTCAAAGAGT +
Preference number: 6 (lower is better)
Translates to: SGWSRSNWKMSS*PTSGQQQCSKS
Trigger: ACTCTTTGAGCACTGCTGTTGGCCTGATGTTGGTCAAGAAGACATCTTCCAGTTACTCCTTGACCACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300589.6
ENST00000641284.1
ENST00000646677.1
ENST00000647318.2
CDS CAA 90 bp GGTCGGGCTTCCCCTCTTCAGGCGAAATCTGTCAGTCTATCTGCATaGCCTTTTGATCTCTACTTCAGTTACTACAACTTCAAAGACACC +
Preference number: 6 (lower is better)
Translates to: GRASPLQAKSVSLSA*PFDLYFSYYNFKDT
Trigger: GGTGTCTTTGAAGTTGTAGTAACTGAAGTAGAGATCAAAAGGCAATGCAGATAGACTGACAGATTTCGCCTGAAGAGGGGAAGCCCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531674.1
CDS CAA 72 bp CATTCAATGAGCTTGCAGATGCCTCGGTCTGAGATATaGTTATCGCGCAAATACAGAGCCTTGCAGACACCA +
Preference number: 6 (lower is better)
Translates to: HSMSLQMPRSEI*LSRKYRALQTP
Trigger: TGGTGTCTGCAAGGCTCTGTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000534057.1
ENST00000647318.2
CDS TCA 72 bp AAGAGCACATTCAATGAGCTTGCAGATGCCTCGGTCTaGGATATTGTTATCGCGCAAATACAGAGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: KSTFNELADASV*DIVIAQIQSLA
Trigger: TGCAAGGCTCTGTATTTGCGCGATAACAATATCTCAGACCGAGGCATCTGCAAGCTCATTGAATGTGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300589.6
ENST00000534057.1
ENST00000647318.2
CDS CAA 90 bp CTTCCCCTCTTCAGGCGAAATCTGTCAGTCTATCTGCATTGCCTTTaGATCTCTACTTCAGTTACTACAACTTCAAAGACACCATTGTCC +
Preference number: 6 (lower is better)
Translates to: LPLFRRNLSVYLHCL*ISTSVTTTSKTPLS
Trigger: GGACAATGGTGTCTTTGAAGTTGTAGTAACTGAAGTAGAGATCAAAAGGCAATGCAGATAGACTGACAGATTTCGCCTGAAGAGGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531674.1
CDS CAA 72 bp TCCCCTCTTCAGGCGAAATCTGTCAGTCTATCTGCATaGCCTTTTGATCTCTACTTCAGTTACTACAACTTC +
Preference number: 6 (lower is better)
Translates to: SPLQAKSVSLSA*PFDLYFSYYNF
Trigger: GAAGTTGTAGTAACTGAAGTAGAGATCAAAAGGCAATGCAGATAGACTGACAGATTTCGCCTGAAGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531674.1
CDS TCA 72 bp TCAGGCGAAATCTGTCAGTCTATCTGCATTGCCTTTTaGTCTCTACTTCAGTTACTACAACTTCAAAGACAC +
Preference number: 6 (lower is better)
Translates to: SGEICQSICIAF*SLLQLLQLQRH
Trigger: GTGTCTTTGAAGTTGTAGTAACTGAAGTAGAGATCAAAAGGCAATGCAGATAGACTGACAGATTTCGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531674.1
CDS CAA 72 bp TTCAGGCGAAATCTGTCAGTCTATCTGCATTGCCTTTaGATCTCTACTTCAGTTACTACAACTTCAAAGACA +
Preference number: 6 (lower is better)
Translates to: FRRNLSVYLHCL*ISTSVTTTSKT
Trigger: TGTCTTTGAAGTTGTAGTAACTGAAGTAGAGATCAAAAGGCAATGCAGATAGACTGACAGATTTCGCCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531674.1