Pregenerated sensors for NOCT (Homo sapiens)
Ensembl gene IDs: ENSG00000151014Ensembl transcript IDs: ENST00000280614.4, ENST00000630479.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAGCTCTCCATGCTGCTaGAGTCACCTCCATCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GRGDGRLLSQLLWRLRQESSPCC*SHLHLP Trigger: GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| 3UTR-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAAAGTGAAAACCAGATaGTTCCCTGTCTTAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEKVKTR*FPVLTS Trigger: AGAGGTTAAGACAGGGAATCATCTGGTTTTCACTTT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTAGGAGCTCTCCATGCTaGTGCAGTCACCTCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: TAPDLVFTIKASNSWFILRSSPC*CSHLHL Trigger: CAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCT...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| 3UTR-3UTR GCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTTCTAGGAGCTCTCCATaGTGCTGCAGTCACCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: TAPDLVFTIKASNSWFILSRSSP*CCSHLH Trigger: ATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGA...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| 3UTR TCA 72 bp | GGAGAATGCCATGAACCCGGGAGGCGGATCTTGCAGTaGGCCGAGATCAGGCCACTGTACTCCAGCCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GECHEPGRRILQ*AEIRPLYSSPG Trigger: GCCTGGGCTGGAGTACAGTGGCCTGATCTCGGCTCACTGCAAGATCCGCCTCCCGGGTTCATGGCATTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| 3UTR GCA 72 bp | TTCCCTGTCTTAACCTCTTCTAGGAGCTCTCCATGCTaGTGCAGTCACCTCCATCTGCCCACACCTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPVLTSSRSSPC*CSHLHLPTPLP Trigger: AGGAAGAGGTGTGGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGACAGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTGGTGACGGGCGCCTGTaGTCCCAGTTGCTCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TAPDLVFTIKASNSWFILGDGRL*SQLLWR Trigger: CCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACC...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCCGGGCGCGTCCCTCTaGAGCAGGGCCGAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEPGASL*SRAEQS Trigger: GCTCTGCTCGGCCCTGCTGCAGAGGGACGCGCCCGG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAGCCGCCGCGGACTATaGAACATGCCGGGCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQESRRGL*NMPGAA Trigger: GGCGGCGCCCGGCATGTTTCATAGTCCGCGGCGGCT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCGGGGAGGTCGGGTGTaGAGGACGGCCCTGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQERGGRV*RTALHS Trigger: GGAATGCAGGGCCGTCCTGCACACCCGACCTCCCCG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCGCGGCGCAGGTTCTaGGGAAATCCCGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEARRRF*GNPGQQ Trigger: CTGCTGCCCGGGATTTCCCCAGAACCTGCGCCGCGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAGCCGGAGAGGGAGGTaGAACACCGCTGCGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQESRRGR*NTAASA Trigger: TGCCGACGCAGCGGTGTTGCACCTCCCTCTCCGGCT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGGCAGTGTGGGCGGATaGTCCCAGGCTCCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEGSVGG*SQAPSR Trigger: GCGAGAAGGAGCCTGGGAGCATCCGCCCACACTGCC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCGGACTATGAAACATaGCGGGCGCCGCCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEADYET*RAPPPP Trigger: TGGTGGCGGCGGCGCCCGGCATGTTTCATAGTCCGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGACTGTCCGGGCAGTGTaGGCGGATGCTCCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQETVRAV*ADAPRL Trigger: GAGCCTGGGAGCATCCGCCCACACTGCCCGGACAGT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGTGCCTGCACTCCCCTaGGGTCCGGATCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEVPALP*GPDLPG Trigger: ACCTGGAAGATCCGGACCTCAGGGGAGTGCAGGCAC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAATCCAGGGTGTGCCTaGACTCCCCTGAGGTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQENPGCA*TPLRSG Trigger: TCCGGACCTCAGGGGAGTGCAGGCACACCCTGGATT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCACTCCAGGGTCTGTaGAATGGCCACCTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEALQGL*NGHLVG Trigger: ACCAACCAGGTGGCCATTGCACAGACCCTGGAGTGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGTCGGCCTGACTCCTTaGACTCCAGGGTCTGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEVGLTP*TPGSVQ Trigger: TTGCACAGACCCTGGAGTGCAAGGAGTCAGGCCGAC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCCCGGGCGCGTCCCTCTaGAGCAGGGCCGAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPPGASL*SRAEQS Trigger: GCTCTGCTCGGCCCTGCTGCAGAGGGACGCGCCCGG...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAGGAGCTCTCCATGCTaGTGCAGTCACCTCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQERSSPC*CSHLHL Trigger: CAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAAATACTCTGGGTGCTaGGAGGCAGCGCTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEKYSGC*EAALLF Trigger: GAACAGCAGCGCTGCCTCCCAGCACCCAGAGTATTT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGATGCTCTGGGTCAGGTaGCACCAAATACTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEMLWVR*HQILWV Trigger: CACCCAGAGTATTTGGTGTCACCTGACCCAGAGCAT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGTGTGCAGGACGGCCCTaGATTCCTCAAGAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQECAGRP*IPQEAL Trigger: AAGAGCTTCTTGAGGAATGCAGGGCCGTCCTGCACA...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGACCCTGATAGGTGGGTaGGTACTAGGGCAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQETLIGG*VLGQSV Trigger: GACAGATTGCCCTAGTACCCACCCACCTATCAGGGT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCCTTCTCCAAGAGCTTaGGCGAGGATGTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEPSPRA*ARMFHC Trigger: GCAATGGAACATCCTCGCCCAAGCTCTTGGAGAAGG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGTTGTCCCAGTTGCTCTaGAGGCTGAGGCAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQELSQLL*RLRQEN Trigger: ATTCTCCTGCCTCAGCCTCCAGAGCAACTGGGACAA...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGAGCACTATAGAGTCTaGTTGTACCGGTTCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEEHYRV*LYRFPW Trigger: CCATGGGAACCGGTACAAGCAGACTCTATAGTGCTC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCGAGGATGTTCCATTaGATAACCCTGATAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEARMFH*ITLIGG Trigger: CCCACCTATCAGGGTTATGCAATGGAACATCCTCGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCGCGCGGCGCAGGTTCTaGGGAAATCCCGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPARRRF*GNPGQQ Trigger: CTGCTGCCCGGGATTTCCCCAGAACCTGCGCCGCGC...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGTTGTACCGGTTCCCATaGAACACACTGTTCGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQELYRFP*NTLFGN Trigger: GTTCCCGAACAGTGTGTTCCATGGGAACCGGTACAA...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCATAACCCTGATAGGTaGGTGGGTACTAGGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEHNPDR*VGTRAI Trigger: GATTGCCCTAGTACCCACCCACCTATCAGGGTTATG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCACTGTCCGGGCAGTGTaGGCGGATGCTCCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPTVRAV*ADAPRL Trigger: GAGCCTGGGAGCATCCGCCCACACTGCCCGGACAGT...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAAGGTGACCAGGGTTTaGGGAAAAACGTGCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEKVTRV*GKTCLD Trigger: ATCAAGGCACGTTTTTCCCCAAACCCTGGTCACCTT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGGTCTGAAGGATAATTaGAGGAAGGTAACCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEGLKDN*RKVTCW Trigger: CCAACAGGTTACCTTCCTTCAATTATCCTTCAGACC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCTGTTAAGACTCTTGTaGTTCAAGGTCAGGAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQELLRLL*FKVRRS Trigger: CGATCTCCTGACCTTGAATCACAAGAGTCTTAACAG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGTTTGGGGAAAAACGTaGCTTGATAGCCTAGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEVWGKT*LDSLVY Trigger: GTAGACTAGGCTATCAAGGCACGTTTTTCCCCAAAC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGAGGAAGGTAACCTGTTaGGTCCAATCTGTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQERKVTC*VQSVLQ Trigger: CTGAAGAACAGATTGGACCCAACAGGTTACCTTCCT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCAGCTCTCCATGCTGCTaGAGTCACCTCCATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPSSPCC*SHLHLP Trigger: GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCT...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCCAGCCCAGGCTGCAGTaGAATGGCGCAATCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPQPRLQ*NGAISA Trigger: AGCTGAGATTGCGCCATTGCACTGCAGCCTGGGCTG...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGTGGAAACGCAGAAAATaGAATGATAGAAACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEWKRRK*NDRNFP Trigger: TGGGAAGTTTCTATCATTTCATTTTCTGCGTTTCCA...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCAAATACTCTGGGTGCTaGGAGGCAGCGCTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPKYSGC*EAALLF Trigger: GAACAGCAGCGCTGCCTCCCAGCACCCAGAGTATTT...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCTCTAGGAGCTCTCCATaGTGCTGCAGTCACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPSRSSP*CCSHLH Trigger: ATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGA...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCGCGAGGATGTTCCATTaGATAACCCTGATAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPARMFH*ITLIGG Trigger: CCCACCTATCAGGGTTATGCAATGGAACATCCTCGC...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCGCAATCTCAGCTCACTaGAACCACCACTTTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPAISAH*NHHFLG Trigger: ACCCAGAAAGTGGTGGTTGCAGTGAGCTGAGATTGC...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCCACAGCAAACTTGACTaGAGAGGCACAAAAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPHSKLD*RGTKAS Trigger: GGATGCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTG...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTCGGGGAGGTCGGGTGTaGAGGACGGCCCTGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILRGGRV*RTALHS Trigger: GGAATGCAGGGCCGTCCTGCACACCCGACCTCCCCG...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCTGGAAACGCAGAAAATaGAATGATAGAAACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPWKRRK*NDRNFP Trigger: TGGGAAGTTTCTATCATTTCATTTTCTGCGTTTCCA...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCCCACTGCACCTGACTTaGTTTTTACAATTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPPLHLT*FLQLKQ Trigger: TTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGTGG...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTATGCTCTGGGTCAGGTaGCACCAAATACTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILMLWVR*HQILWV Trigger: CACCCAGAGTATTTGGTGTCACCTGACCCAGAGCAT...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTTGTGCAGGACGGCCCTaGATTCCTCAAGAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILCAGRP*IPQEAL Trigger: AAGAGCTTCTTGAGGAATGCAGGGCCGTCCTGCACA...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTTTGTCCCAGTTGCTCTaGAGGCTGAGGCAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILLSQLL*RLRQEN Trigger: ATTCTCCTGCCTCAGCCTCCAGAGCAACTGGGACAA...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTGCATCCAGCATACCTTaGGCGAGGATGTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILASSIP*ARMFHC Trigger: GCAATGGAACATCCTCGCCCAAGGTATGCTGGATGC...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTCAGTCACAGCAAACTTaGCTGCAGAGGCACAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILQSQQT*LQRHKS Trigger: GCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTGACTG...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR GCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTAGTGCACTGTGGATGTaGAGAAGCAGAAAGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILSALWM*RSRKAV Trigger: GACTGCCTTTCTGCTTCTGCACATCCACAGTGCACT...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTCTGTTAAGACTCTTGTaGTTCAAGGTCAGGAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILLLRLL*FKVRRS Trigger: CGATCTCCTGACCTTGAATCACAAGAGTCTTAACAG...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR TCA 90 bp | ACTGCACCTGACTTGGTTTTTACAATTAAAGCAAGTAACTCGTGGTTTATTCTTAAAGTGAAAACCAGATaGTTCCCTGTCTTAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAPDLVFTIKASNSWFILKVKTR*FPVLTS Trigger: AGAGGTTAAGACAGGGAATCATCTGGTTTTCACTTT...AAGAATAAACCACGAGTTACTTGCTTTAATTGTAAAAACCAAGTCAGGTGCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS CCA 90 bp | CGCCGCCACCACGGCCCCTCGCGCGCCCGAGGAGCGGAGCCCGGCTaGGGCCGAGGGCACCGAGTCGAGCCGACTGTCCGGGCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRHHGPSRARGAEPG*GRGHRVEPTVRAVW Trigger: CCACACTGCCCGGACAGTCGGCTCGACTCGGTGCCCTCGGCCCCAGCCGGGCTCCGCTCCTCGGGCGCGCGAGGGGCCGTGGTGGCGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS CCA 90 bp | GGCTGGGGCCGAGGGCACCGAGTCGAGCCGACTGTCCGGGCAGTGTaGGCGGATGCTCCCAGGCTCCTTCTCGCGCGGCGCAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGRGHRVEPTVRAV*ADAPRLLLARRRFW Trigger: CCAGAACCTGCGCCGCGCGAGAAGGAGCCTGGGAGCATCCGCCCACACTGCCCGGACAGTCGGCTCGACTCGGTGCCCTCGGCCCCAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS GCA 90 bp | CCGAGGGCACCGAGTCGAGCCGACTGTCCGGGCAGTGTGGGCGGATaGTCCCAGGCTCCTTCTCGCGCGGCGCAGGTTCTGGGGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PRAPSRADCPGSVGG*SQAPSRAAQVLGKS Trigger: GGATTTCCCCAGAACCTGCGCCGCGCGAGAAGGAGCCTGGGAGCATCCGCCCACACTGCCCGGACAGTCGGCTCGACTCGGTGCCCTCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS CCA 90 bp | GTGTGGGCGGATGCTCCCAGGCTCCTTCTCGCGCGGCGCAGGTTCTaGGGAAATCCCGGGCAGCAGAGCCGGAGAGGGAGGTGCAACACC | + |
|
Preference number: 5 (lower is better) Translates to: VWADAPRLLLARRRF*GNPGQQSRRGRCNT Trigger: GGTGTTGCACCTCCCTCTCCGGCTCTGCTGCCCGGGATTTCCCCAGAACCTGCGCCGCGCGAGAAGGAGCCTGGGAGCATCCGCCCACAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGGTGACGGGCGCCTGTaGTCCCAGTTGCTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEGDGRL*SQLLWR Trigger: CCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCGCCTGTTGTCCCAGTaGCTCTGGAGGCTGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQERLLSQ*LWRLRQ Trigger: CTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGTGTCGGCCTGACTCCTaGCACTCCAGGGTCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQECRPDS*HSRVCA Trigger: TGCACAGACCCTGGAGTGCAAGGAGTCAGGCCGACA...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCCTTCTCCAAGAGCTaGGGCGAGGATGTTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEAFSKS*GEDVPL Trigger: CAATGGAACATCCTCGCCCAAGCTCTTGGAGAAGGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGGCGAGGATGTTCCATaGCATAACCCTGATAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEGEDVP*HNPDRW Trigger: CCACCTATCAGGGTTATGCAATGGAACATCCTCGCC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCACTATAGAGTCTGCTaGTACCGGTTCCCATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEHYRVC*YRFPWN Trigger: GTTCCATGGGAACCGGTACAAGCAGACTCTATAGTG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGGGAATCTTGGCTCCTaGGGTGATGTTTTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEGNLGS*GDVLQV Trigger: AACCTGCAAAACATCACCCAAGGAGCCAAGATTCCC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCAGTCACAGCAAACTaGACTGCAGAGGCACAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEAVTAN*TAEAQK Trigger: CTTTTGTGCCTCTGCAGTCAAGTTTGCTGTGACTGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGGGCACTGTACAAAGTaGTCTTTGCCTTCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEGHCTK*SLPSPR Trigger: TCTTGGAGAAGGCAAAGACAACTTTGTACAGTGCCC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGTCTGTTGGCTCTGCATaGAAGTCCCCACACACAATA | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQESVGSA*KSPHTI Trigger: TATTGTGTGTGGGGACTTCAATGCAGAGCCAACAGA...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCGGTGACGGGCGCCTGTaGTCCCAGTTGCTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPGDGRL*SQLLWR Trigger: CCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACC...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCCATCTGGTCCATTGTaGTGTTCTACATCTAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEPSGPL*CSTSRQ Trigger: TTGTCTAGATGTAGAACACAACAATGGACCAGATGG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGCAACCATCTGGTCCATaGTTGTGTTCTACATCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEQPSGP*LCSTSR Trigger: TCTAGATGTAGAACACAACAATGGACCAGATGGTTG...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000280614.4 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGGCCACTGCACCTGACTaGGTTTTTACAATTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEATAPD*VFTIKA Trigger: TGCTTTAATTGTAAAAACCAAGTCAGGTGCAGTGGC...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GGGCGTGGTGACGGGCGCCTGTTGTCCCAGTTGCTCTGGAGGCTGAGGCAGGAGATCCTTCCTCTGGCATaGTCTTATCCTATTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRGDGRLLSQLLWRLRQEILPLA*SYPICF Trigger: GAAACAAATAGGATAAGACAATGCCAGAGGAAGGAT...CTCCTGCCTCAGCCTCCAGAGCAACTGGGACAACAGGCGCCCGTCACCACGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCGGCGAGGATGTTCCATaGCATAACCCTGATAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPGEDVP*HNPDRW Trigger: CCACCTATCAGGGTTATGCAATGGAACATCCTCGCC...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS-3UTR CAA 90 bp | GTCTTAACCTCTTCTAGGAGCTCTCCATGCTGCTGCAGTCACCTCCATCTGCCCAGCATCCAGCATACCTaGGGCGAGGATGTTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VLTSSRSSPCCCSHLHLPSIQHT*GEDVPL Trigger: CAATGGAACATCCTCGCCCAAGGTATGCTGGATGCT...GGGCAGATGGAGGTGACTGCAGCAGCATGGAGAGCTCCTAGAAGAGGTTAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS TCA 90 bp | GTGCACTGTGGATGTGCAGAAGCAGAAAGGCAGTCACAGCAAACTTaGCTGCAGAGGCACAAAAGCATCCAGCATACCTTGGGCGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHCGCAEAERQSQQT*LQRHKSIQHTLGED Trigger: ATCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTGACTGCCTTTCTGCTTCTGCACATCCACAGTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS GCA 90 bp | AGAGGCACAAAAGCATCCAGCATACCTTGGGCGAGGATGTTCCATTaGATAACCCTGATAGGTGGGTGGGTACTAGGGCAATCTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGTKASSIPWARMFH*ITLIGGWVLGQSVL Trigger: GAGGACAGATTGCCCTAGTACCCACCCACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS GCA 90 bp | ACTGTGGATGTGCAGAAGCAGAAAGGCAGTCACAGCAAACTTGACTaGAGAGGCACAAAAGCATCCAGCATACCTTGGGCGAGGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVDVQKQKGSHSKLD*RGTKASSIPWARMF Trigger: GAACATCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTGACTGCCTTTCTGCTTCTGCACATCCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS CCA 90 bp | CACAGCAAACTTGACTGCAGAGGCACAAAAGCATCCAGCATACCTTaGGCGAGGATGTTCCATTGCATAACCCTGATAGGTGGGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSKLDCRGTKASSIP*ARMFHCITLIGGWV Trigger: TACCCACCCACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS GCA 72 bp | GCAGGGCCGAGCAGAGCCGCCGCGGACTATGAAACATaGCGGGCGCCGCCGCCACCACGGCCCCTCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPSRAAADYET*RAPPPPRPLAR Trigger: GCGCGCGAGGGGCCGTGGTGGCGGCGGCGCCCGGCATGTTTCATAGTCCGCGGCGGCTCTGCTCGGCCCTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS TCA 72 bp | CTCTGCAGCAGGGCCGAGCAGAGCCGCCGCGGACTATaGAACATGCCGGGCGCCGCCGCCACCACGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCSRAEQSRRGL*NMPGAAATTAP Trigger: AGGGGCCGTGGTGGCGGCGGCGCCCGGCATGTTTCATAGTCCGCGGCGGCTCTGCTCGGCCCTGCTGCAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS CCA 72 bp | CGAGGGCACCGAGTCGAGCCGACTGTCCGGGCAGTGTaGGCGGATGCTCCCAGGCTCCTTCTCGCGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGHRVEPTVRAV*ADAPRLLLARR Trigger: GCGCCGCGCGAGAAGGAGCCTGGGAGCATCCGCCCACACTGCCCGGACAGTCGGCTCGACTCGGTGCCCTCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS GCA 72 bp | CCGAGTCGAGCCGACTGTCCGGGCAGTGTGGGCGGATaGTCCCAGGCTCCTTCTCGCGCGGCGCAGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSRADCPGSVGG*SQAPSRAAQVL Trigger: CAGAACCTGCGCCGCGCGAGAAGGAGCCTGGGAGCATCCGCCCACACTGCCCGGACAGTCGGCTCGACTCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS CCA 72 bp | GATGCTCCCAGGCTCCTTCTCGCGCGGCGCAGGTTCTaGGGAAATCCCGGGCAGCAGAGCCGGAGAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DAPRLLLARRRF*GNPGQQSRRGR Trigger: CCTCCCTCTCCGGCTCTGCTGCCCGGGATTTCCCCAGAACCTGCGCCGCGCGAGAAGGAGCCTGGGAGCATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280614.4 ENST00000630479.1 |
||
| CDS GCA 72 bp | GTGCAGAAGCAGAAAGGCAGTCACAGCAAACTTGACTaGAGAGGCACAAAAGCATCCAGCATACCTTGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VQKQKGSHSKLD*RGTKASSIPWA Trigger: CGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTGACTGCCTTTCTGCTTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS CAA 90 bp | CAGAGGCACAAAAGCATCCAGCATACCTTGGGCGAGGATGTTCCATaGCATAACCCTGATAGGTGGGTGGGTACTAGGGCAATCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QRHKSIQHTLGEDVP*HNPDRWVGTRAICP Trigger: AGGACAGATTGCCCTAGTACCCACCCACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS CAA 90 bp | AGTGCACTGTGGATGTGCAGAAGCAGAAAGGCAGTCACAGCAAACTaGACTGCAGAGGCACAAAAGCATCCAGCATACCTTGGGCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SALWMCRSRKAVTAN*TAEAQKHPAYLGRG Trigger: TCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTGCAGTCAAGTTTGCTGTGACTGCCTTTCTGCTTCTGCACATCCACAGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS GCA 72 bp | AAAGCATCCAGCATACCTTGGGCGAGGATGTTCCATTaGATAACCCTGATAGGTGGGTGGGTACTAGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: KASSIPWARMFH*ITLIGGWVLGQ Trigger: TTGCCCTAGTACCCACCCACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTATGCTGGATGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS CAA 72 bp | AAAAGCATCCAGCATACCTTGGGCGAGGATGTTCCATaGCATAACCCTGATAGGTGGGTGGGTACTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSIQHTLGEDVP*HNPDRWVGTRA Trigger: TGCCCTAGTACCCACCCACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTATGCTGGATGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||
| CDS CCA 72 bp | CTTGACTGCAGAGGCACAAAAGCATCCAGCATACCTTaGGCGAGGATGTTCCATTGCATAACCCTGATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LDCRGTKASSIP*ARMFHCITLIG Trigger: ACCTATCAGGGTTATGCAATGGAACATCCTCGCCCAAGGTATGCTGGATGCTTTTGTGCCTCTGCAGTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630479.1 |
||