Pregenerated sensors for NOBOX (Homo sapiens)
Ensembl gene IDs: ENSG00000106410Ensembl transcript IDs: ENST00000467773.1, ENST00000483238.5, ENST00000643164.1, ENST00000643277.2, ENST00000643555.2, ENST00000644387.2, ENST00000645489.1, ENST00000646309.2
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGTTTTGGTTGCTCTGCGCCAATGTACTGAGGAGATTGGCCAGGTaGCAGGGCCCCCGGCCTGACCCACAGGGCACTGGGTTGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LFWLLCANVLRRLAR*QGPRPDPQGTGLCV Trigger: CACACACAACCCAGTGCCCTGTGGGTCAGGCCGGGGGCCCTGCCACCTGGCCAATCTCCTCAGTACATTGGCGCAGAGCAACCAAAACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS TCA 90 bp | GGCTGTACCTATATTCCCAGCAGGTGGTTGCATCAGGATCTGTCCTaGGGAGGCACCTGGGCAATAGCCCTGCGATGTGCCCCCGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GCTYIPSRWLHQDLS*GGTWAIALRCAPAG Trigger: CCCAGCGGGGGCACATCGCAGGGCTATTGCCCAGGTGCCTCCTCAGGACAGATCCTGATGCAACCACCTGCTGGGAATATAGGTACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS GCA 90 bp | CGGCGATTCTGGAACCACACCCAGGCTACCGCTGAGCGCTCACTCTaGAATTCGAGTGTTTCAATGGTGGGCCCTCCGCCACTCCACCCT | + |
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Preference number: 5 (lower is better) Translates to: RRFWNHTQATAERSL*NSSVSMVGPPPLHP Trigger: AGGGTGGAGTGGCGGAGGGCCCACCATTGAAACACTCGAATTGCAGAGTGAGCGCTCAGCGGTAGCCTGGGTGTGGTTCCAGAATCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467773.1 ENST00000643277.2 ENST00000644387.2 |
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| CDS TCA 90 bp | AGGGCTGATCCAGGGAAGCAGCTGGTGGTTCCTCTTTTGCCTTGCTaGGTAAGGGCCCAGTCCCTGGTCTGGCCCCTTCAGGCATCCATG | + |
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Preference number: 5 (lower is better) Translates to: RADPGKQLVVPLLPC*VRAQSLVWPLQASM Trigger: CATGGATGCCTGAAGGGGCCAGACCAGGGACTGGGCCCTTACTCAGCAAGGCAAAAGAGGAACCACCAGCTGCTTCCCTGGATCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CCA 90 bp | ATGCCCCAGAGCTTGTGGGCAGAACGGACCAGGGAAGGGCAGCTCTaGCAAACAGGGGTCACTCCAGGAGGCTGTACCTATATTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: MPQSLWAERTREGQL*QTGVTPGGCTYIPS Trigger: GCTGGGAATATAGGTACAGCCTCCTGGAGTGACCCCTGTTTGCCAGAGCTGCCCTTCCCTGGTCCGTTCTGCCCACAAGCTCTGGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS GCA 90 bp | TGGCTTCTCCAGAGACTGCTGGCGGCTTCTTCTCTCCTGAGATGGTaGAGGAGGGTGGCAGTTCCTCACTCTGAGTGTCCTGAGCATGAG | + |
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Preference number: 5 (lower is better) Translates to: WLLQRLLAASSLLRW*RRVAVPHSECPEHE Trigger: CTCATGCTCAGGACACTCAGAGTGAGGAACTGCCACCCTCCTGCACCATCTCAGGAGAGAAGAAGCCGCCAGCAGTCTCTGGAGAAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CCA 90 bp | TATCCAGAGGGGACTCCTGAGGGAAAGGGTCAGGCTTTGGCTCCATaGGCACAGCAGGTAGGATCTCAGCTGCAGAGCTGCATTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: YPEGTPEGKGQALAP*AQQVGSQLQSCIDC Trigger: GCAGTCAATGCAGCTCTGCAGCTGAGATCCTACCTGCTGTGCCCATGGAGCCAAAGCCTGACCCTTTCCCTCAGGAGTCCCCTCTGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CAA 90 bp | TTGGCCAGGTGGCAGGGCCCCCGGCCTGACCCACAGGGCACTGGGTaGTGTGTGGCACGGGCTGAGTTAGGGGCACCCGGAGATGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LARWQGPRPDPQGTG*CVARAELGAPGDDV Trigger: AACATCATCTCCGGGTGCCCCTAACTCAGCCCGTGCCACACACAACCCAGTGCCCTGTGGGTCAGGCCGGGGGCCCTGCCACCTGGCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CAA 90 bp | GGTGGCAGGGTGATGCTTGTCCCCCAGGACCCACAGGGGCCGTCCTaGTGGCTGCTGTCACTGCCAGCAACATCCATCAGCAGTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: GGRVMLVPQDPQGPS*WLLSLPATSISSGI Trigger: GATGCCACTGCTGATGGATGTTGCTGGCAGTGACAGCAGCCACAAGGACGGCCCCTGTGGGTCCTGGGGGACAAGCATCACCCTGCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CAA 90 bp | TTGTGGTCTCTGTTTTGGTTGCTCTGCGCCAATGTACTGAGGAGATaGGCCAGGTGGCAGGGCCCCCGGCCTGACCCACAGGGCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: LWSLFWLLCANVLRR*ARWQGPRPDPQGTG Trigger: CCCAGTGCCCTGTGGGTCAGGCCGGGGGCCCTGCCACCTGGCCAATCTCCTCAGTACATTGGCGCAGAGCAACCAAAACAGAGACCACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS GCA 72 bp | TTGTCCCCCAGGACCCACAGGGGCCGTCCTTGTGGCTaGTGTCACTGCCAGCAACATCCATCAGCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSPRTHRGRPCG*CHCQQHPSAVA Trigger: TGCCACTGCTGATGGATGTTGCTGGCAGTGACAGCAGCCACAAGGACGGCCCCTGTGGGTCCTGGGGGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CCA 72 bp | GGGTCACCACCCTCTGAGCACCCTCACTGGGTTGGGTaGGGGCCAAAGTCTGGTCAGAAGTCAGCAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: GSPPSEHPHWVG*GPKSGQKSAAW Trigger: CCATGCTGCTGACTTCTGACCAGACTTTGGCCCCCACCCAACCCAGTGAGGGTGCTCAGAGGGTGGTGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CAA 72 bp | CTGTTTTGGTTGCTCTGCGCCAATGTACTGAGGAGATaGGCCAGGTGGCAGGGCCCCCGGCCTGACCCACAG | + |
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Preference number: 6 (lower is better) Translates to: LFWLLCANVLRR*ARWQGPRPDPQ Trigger: CTGTGGGTCAGGCCGGGGGCCCTGCCACCTGGCCAATCTCCTCAGTACATTGGCGCAGAGCAACCAAAACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS GCA 72 bp | TGGAACCACACCCAGGCTACCGCTGAGCGCTCACTCTaGAATTCGAGTGTTTCAATGGTGGGCCCTCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: WNHTQATAERSL*NSSVSMVGPPP Trigger: TGGCGGAGGGCCCACCATTGAAACACTCGAATTGCAGAGTGAGCGCTCAGCGGTAGCCTGGGTGTGGTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467773.1 ENST00000643277.2 ENST00000644387.2 |
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| CDS CCA 72 bp | AGCTTGTGGGCAGAACGGACCAGGGAAGGGCAGCTCTaGCAAACAGGGGTCACTCCAGGAGGCTGTACCTAT | + |
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Preference number: 6 (lower is better) Translates to: SLWAERTREGQL*QTGVTPGGCTY Trigger: ATAGGTACAGCCTCCTGGAGTGACCCCTGTTTGCCAGAGCTGCCCTTCCCTGGTCCGTTCTGCCCACAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CAA 90 bp | CTGGAAAGGTATCCAGAGGGGACTCCTGAGGGAAAGGGTCAGGCTTaGGCTCCATGGGCACAGCAGGTAGGATCTCAGCTGCAGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LERYPEGTPEGKGQA*APWAQQVGSQLQSC Trigger: GCAGCTCTGCAGCTGAGATCCTACCTGCTGTGCCCATGGAGCCAAAGCCTGACCCTTTCCCTCAGGAGTCCCCTCTGGATACCTTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS TCA 72 bp | TATATTCCCAGCAGGTGGTTGCATCAGGATCTGTCCTaGGGAGGCACCTGGGCAATAGCCCTGCGATGTGCC | + |
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Preference number: 6 (lower is better) Translates to: YIPSRWLHQDLS*GGTWAIALRCA Trigger: GGCACATCGCAGGGCTATTGCCCAGGTGCCTCCTCAGGACAGATCCTGATGCAACCACCTGCTGGGAATATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643164.1 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CCA 72 bp | AGAATAGGACCTCTTTCCTATCTTCACCTCTCCCACTaGGAGGGAACAATCTTCCCCCTGAGTCTGGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RIGPLSYLHLSH*EGTIFPLSLGP Trigger: AGGCCCCAGACTCAGGGGGAAGATTGTTCCCTCCCAGTGGGAGAGGTGAAGATAGGAAAGAGGTCCTATTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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| CDS CCA 72 bp | ACCCATGGCATTAGGCTTTTTCTGCTTCCCGGGGGCTaGAGAATAGGACCTCTTTCCTATCTTCACCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: THGIRLFLLPGG*RIGPLSYLHLS Trigger: GGAGAGGTGAAGATAGGAAAGAGGTCCTATTCTCCAGCCCCCGGGAAGCAGAAAAAGCCTAATGCCATGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENST00000467773.1 ENST00000483238.5 ENST00000643277.2 ENST00000643555.2 ENST00000644387.2 ENST00000645489.1 ENST00000646309.2 |
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