Pregenerated sensors for NOB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000141101Ensembl transcript IDs: ENST00000561677.6, ENST00000563055.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGACCTTTCAAACTCCCAACCCACAGGAGCAGTGGAGGAGAAGTTaGGCTGTCGTCAGAAGACCAAAAGTCAAGGCCTCACCAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: QTFQTPNPQEQWRRS*AVVRRPKVKASPAA Trigger: AGCTGCTGGTGAGGCCTTGACTTTTGGTCTTCTGACGACAGCTCAACTTCTCCTCCACTGCTCCTGTGGGTTGGGAGTTTGAAAGGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563055.1 |
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| CDS GCA 90 bp | TCACCAAATGGCACAGGTGGTTTCCAGAACCAGGAAAAGAAGCGCTaGACAGCACCAGTTCCGTGTACATCTGTACACCTCGGTAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SPNGTGGFQNQEKKR*TAPVPCTSVHLGRT Trigger: GGTCCTACCGAGGTGTACAGATGTACACGGAACTGGTGCTGTGCAGCGCTTCTTTTCCTGGTTCTGGAAACCACCTGTGCCATTTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561677.6 |
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| CDS CAA 90 bp | ACAGACCTTTCAAACTCCCAACCCACAGGAGCAGTGGAGGAGAAGTaGAGCTGTCGTCAGAAGACCAAAAGTCAAGGCCTCACCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TDLSNSQPTGAVEEK*SCRQKTKSQGLTSS Trigger: GCTGCTGGTGAGGCCTTGACTTTTGGTCTTCTGACGACAGCTCAACTTCTCCTCCACTGCTCCTGTGGGTTGGGAGTTTGAAAGGTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563055.1 |
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| CDS TCA 72 bp | CAAACTCCCAACCCACAGGAGCAGTGGAGGAGAAGTTaGGCTGTCGTCAGAAGACCAAAAGTCAAGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QTPNPQEQWRRS*AVVRRPKVKAS Trigger: TGAGGCCTTGACTTTTGGTCTTCTGACGACAGCTCAACTTCTCCTCCACTGCTCCTGTGGGTTGGGAGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563055.1 |
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| CDS CAA 72 bp | TCAAACTCCCAACCCACAGGAGCAGTGGAGGAGAAGTaGAGCTGTCGTCAGAAGACCAAAAGTCAAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SNSQPTGAVEEK*SCRQKTKSQGL Trigger: GAGGCCTTGACTTTTGGTCTTCTGACGACAGCTCAACTTCTCCTCCACTGCTCCTGTGGGTTGGGAGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563055.1 |
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