RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NNAT (Homo sapiens)

Ensembl gene IDs: ENSG00000053438

Ensembl transcript IDs: ENST00000346199.3, ENST00000647955.1, ENST00000649309.1, ENST00000649451.1, ENST00000649697.1

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATaGACAGGAGCACCTGATGATACGGCCGCCCAGGGCTGGGAGCTG +
Preference number: 1 (lower is better)
Translates to: GPHIPARHWLPCWPR*TGAPDDTAAQGWEL
Trigger: CAGCTCCCAGCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR GCA 90 bp GCCAAGTGCTCCTCTGGCGAGGGAACACAGGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACC +
Preference number: 1 (lower is better)
Translates to: AKCSSGEGTQGTPHS*AALAPVLAEMHRST
Trigger: GGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCTCGCCAGAGGAGCACTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CCA 90 bp GAACACAGGGGACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: EHRGPHIPARHWLPC*PRCTGAPDDTAAQG
Trigger: GCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR GCA 90 bp AGGGAACACAGGGGACCCCACATTCCTGCGCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAG +
Preference number: 1 (lower is better)
Translates to: REHRGPHIPARHWLP*WPRCTGAPDDTAAQ
Trigger: CTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CCA 90 bp CCTCTGGCGAGGGAACACAGGGGACCCCACATTCCTGCGCGGCACTaGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACG +
Preference number: 1 (lower is better)
Translates to: PLAREHRGPHIPARH*LPCWPRCTGAPDDT
Trigger: CGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCTCGCCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR GCA 90 bp ATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTaGTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCA +
Preference number: 1 (lower is better)
Translates to: MVGPAGMALASGLGW*CPDFVQIRMRCLCP
Trigger: TGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 90 bp TCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATaGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGC +
Preference number: 1 (lower is better)
Translates to: SMVGPAGMALASGLG*CCPDFVQIRMRCLC
Trigger: GCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 90 bp CAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTaGGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTG +
Preference number: 1 (lower is better)
Translates to: QGVGWRCQNVHSAGW*GVLISMVGPAGMAL
Trigger: CAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 90 bp GAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTaGCCTCCAGTCCCGCCACACAGGCACGCGGTTGGTGCTGCACCA +
Preference number: 1 (lower is better)
Translates to: ERAPLYFLTTLLPQL*PPVPPHRHAVGAAP
Trigger: TGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 90 bp GAGGAGGAAAGGGGAATCGAGAGAGCAAATGCAGCGAGGCTGGAATaGAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATT +
Preference number: 1 (lower is better)
Translates to: EEERGIERANAARLE*KCPGQGTARGPHCI
Trigger: AATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATTCCCCTTTCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CCA 90 bp ATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTaGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCC +
Preference number: 1 (lower is better)
Translates to: IQGVGWRCQNVHSAG*CGVLISMVGPAGMA
Trigger: GGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 90 bp ACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTaGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGTTTTG +
Preference number: 1 (lower is better)
Translates to: TQARGWCCTKIQGVG*RCQNVHSAGWCGVL
Trigger: CAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 90 bp CTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCC +
Preference number: 1 (lower is better)
Translates to: LLSRPCPLVGPVQRG*EGIWYLRHCRYCFS
Trigger: GGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
3UTR CCA 90 bp GGGAATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTaGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACC +
Preference number: 1 (lower is better)
Translates to: GNRESKCSEAGMQVP*ARDSERAPLYFLTT
Trigger: GGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 90 bp CAAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: QDSGRRLAMSECPFC*LVRCFDFHGGACWH
Trigger: ATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp GGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 2 (lower is better)
Translates to: GLLAWPWLRGWDGAVPTLRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...CAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp TCCCGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGCATGGTGGGGCCTGCTaGCATGGCCCTGGCTTCGGG +
Preference number: 2 (lower is better)
Translates to: SRHTGTRLVLHQDSGRRLHGGAC*HGPGFG
Trigger: CCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG...CAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp GGGGTCTACTGGCCCCTCACTGACCTTGCCAAGTGCTCCTCTGGCGAGGGAACAGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: GVYWPLTDLAKCSSGEGTGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp TGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACCGTGCTGGCCGAGATaGACAGGAGCACCTGATGAT +
Preference number: 2 (lower is better)
Translates to: CSEAGMQVPWARDSERAPPCWPR*TGAPDD
Trigger: ATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGG...TGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 2 (lower is better)
Translates to: LECKCPGQGTARGPHCISGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CAA 90 bp CTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: LAWPWLRGWDGAVPT*SRSECGAYAQISGV
Trigger: GACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGCCGTGCTGGCCGAGATaGACAGGAGCACCTGATGAT +
Preference number: 2 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRPCWPR*TGAPDD
Trigger: ATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGG...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp AGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTCTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 2 (lower is better)
Translates to: RLECKCPGQGTARGPHCILLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...AATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp AGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGTTTCCCTGGCTTCGGGGCTaGGATGGTGCTGTCCCGACT +
Preference number: 2 (lower is better)
Translates to: RASAGDVRMSILLAGAVFPWLRG*DGAVPT
Trigger: AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG...AAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp GGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGTGGGGCCTGCTGGCATaGCCCTGGCTTCGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GQREGPTVFLNHPPSSTVWGLLA*PWLRGW
Trigger: CCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA...CACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CAA 90 bp GGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGTTTaGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGG +
Preference number: 2 (lower is better)
Translates to: GWRCQNVHSAGWCGV*ISMVGPAGMALASG
Trigger: CCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp TTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 2 (lower is better)
Translates to: FPWWGLLAWPWLRGWDGAPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...AGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTCATGGTGGGGCCTGCTaGCATGGCCCTGGCTTCGGG +
Preference number: 2 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSHGGAC*HGPGFG
Trigger: CCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp AATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 2 (lower is better)
Translates to: NASALGKGQREGPTVFLNRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...GTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACACTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 2 (lower is better)
Translates to: IERANAARLECKCPGQGTLLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp CTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCGCACGCGGTTGGTGCTaGACCAAGATTCAGGGCGTC +
Preference number: 2 (lower is better)
Translates to: LGKGQREGPTVFLNHPPSARGWC*TKIQGV
Trigger: GACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGC...GGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTCTGCTGGCATGGCCCTaGCTTCGGGGCTGGGATGGT +
Preference number: 2 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSLLAWP*LRGWDG
Trigger: ACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAG...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 2 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp GAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: EAGMQVPWARDSERAPLYQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...ATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CAA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: PPLSTLPLSGTGAKG*GRDLVSSSLSVLLL
Trigger: GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
3UTR-3UTR TCA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTCTACTGGCCCCTCACTaGCCTTGCCAAGTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSLLAPH*PCQVLL
Trigger: GAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAG...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp AGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 2 (lower is better)
Translates to: REQMQRGWNASALGKGQRTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...TCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp TTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCCGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 2 (lower is better)
Translates to: LSRSECGAYAQISGVCSPRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...GGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp GAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTGTCCAGATCAGAATaGGGTGCCTATGCCCAGATC +
Preference number: 2 (lower is better)
Translates to: EAGMQVPWARDSERAPLYLSRSE*GAYAQI
Trigger: GATCTGGGCATAGGCACCGCATTCTGATCTGGACAA...ATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCA +
Preference number: 2 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSHWLPC*PRCTGA
Trigger: TGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp AAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCAGAATGCGGTGCCTATaGCCAGATCTCAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: KIQGVGWRCQNVHSAGWCRMRCL*PDLRGL
Trigger: CAGACCCCTGAGATCTGGGCATAGGCACCGCATTCT...GCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: LECKCPGQGTARGPHCISQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp CAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 2 (lower is better)
Translates to: QVPWARDSERAPLYFLTTPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...GGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CCA 90 bp GAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGAT +
Preference number: 2 (lower is better)
Translates to: EAGMQVPWARDSERAPLYECPFC*LVRCFD
Trigger: ATCAAAACACCGCACCAGCCAGCAGAATGGACATTC...ATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 2 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 2 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR GCA 90 bp AATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: NASALGKGQREGPTVFLNQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...GTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp ATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATaGACAGGAGCACCTGATGATACGGCCGCCCAGGGC +
Preference number: 3 (lower is better)
Translates to: IPARHWLPCWPR*TGAPDDTAAQG
Trigger: GCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR GCA 72 bp CCCTCCAGTCCCGCCACACAGGCACGCGGTTGGTGCTaGACCAAGATTCAGGGCGTCGGCTGGCGATGTCAG +
Preference number: 3 (lower is better)
Translates to: PSSPATQARGWC*TKIQGVGWRCQ
Trigger: CTGACATCGCCAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGACTGGAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp GGACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCACCTGATGATACGGCC +
Preference number: 3 (lower is better)
Translates to: GPHIPARHWLPC*PRCTGAPDDTA
Trigger: GGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CCA 72 bp AGGGAACACAGGGGACCCCACATTCCTGCGCGGCACTaGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCT +
Preference number: 3 (lower is better)
Translates to: REHRGPHIPARH*LPCWPRCTGAP
Trigger: AGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR GCA 72 bp AGGGGACCCCACATTCCTGCGCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGAGCACCTGATGATACG +
Preference number: 3 (lower is better)
Translates to: RGPHIPARHWLP*WPRCTGAPDDT
Trigger: CGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CCA 72 bp GGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATaGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGG +
Preference number: 3 (lower is better)
Translates to: GPAGMALASGLG*CCPDFVQIRMR
Trigger: CCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp CCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTaGTGTCCCGACTTTGTCCAGATCAGAATGCGGTGC +
Preference number: 3 (lower is better)
Translates to: PAGMALASGLGW*CPDFVQIRMRC
Trigger: GCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp TGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTaGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAA +
Preference number: 3 (lower is better)
Translates to: WWGLLAWPWLRG*DGAVPTLSRSE
Trigger: TTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CAA 90 bp TGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCTGGCCCCTCACTGACCTaGCCAAGTGCTCCTCTGGCG +
Preference number: 3 (lower is better)
Translates to: CPDQNAVPMPRSQGSAPPGPSLT*PSAPLA
Trigger: CGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCC...AGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR-3UTR CAA 90 bp TTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCGGCCCCTCACTGACCTaGCCAAGTGCTCCTCTGGCG +
Preference number: 3 (lower is better)
Translates to: LSRSECGAYAQISGVCSPGPSLT*PSAPLA
Trigger: CGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCC...GGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR GCA 72 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTaGCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGT +
Preference number: 3 (lower is better)
Translates to: IERANAARLECK*PGQGTARGPHC
Trigger: ACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp CGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTaGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: RGWCCTKIQGVG*RCQNVHSAGWC
Trigger: GCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CAA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 3 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRLVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
3UTR GCA 72 bp TGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATaGCCAGATCTCAGGGGTCTGCTCCCCCTATCCCCC +
Preference number: 3 (lower is better)
Translates to: CPDFVQIRMRCL*PDLRGLLPLSP
Trigger: GGGGGATAGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp GGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: GRRLAMSECPFC*LVRCFDFHGGA
Trigger: GGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp GAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTaGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTC +
Preference number: 3 (lower is better)
Translates to: ESKCSEAGMQVP*ARDSERAPLYF
Trigger: GAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp TGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGGGGTCTGCTCCCCCTA +
Preference number: 3 (lower is better)
Translates to: WCCPDFVQIRMR*LCPDLRGLLPL
Trigger: TAGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp TGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATaGGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: WDGAVPTLSRSE*GAYAQISGVCS
Trigger: GGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp GGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTaGGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: GWRCQNVHSAGW*GVLISMVGPAG
Trigger: GCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp CCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTaGCCTCCAGTCCCGCCACACAGGCACGCGGTTGGT +
Preference number: 3 (lower is better)
Translates to: PLYFLTTLLPQL*PPVPPHRHAVG
Trigger: ACCAACCGCGTGCCTGTGTGGCGGGACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp CGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTTCGTCATTGTCGGTAC +
Preference number: 3 (lower is better)
Translates to: RPCPLVGPVQRG*EGIWYLRHCRY
Trigger: GTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
3UTR-3UTR CAA 90 bp AAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGT +
Preference number: 3 (lower is better)
Translates to: KIQGVGWRCQNVHSAGWCGAVPT*SRSECG
Trigger: ACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC...GCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR GCA 72 bp TCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTaGTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGG +
Preference number: 3 (lower is better)
Translates to: SGRRLAMSECPF*WLVRCFDFHGG
Trigger: CCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CCA 72 bp GTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTaGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCT +
Preference number: 3 (lower is better)
Translates to: VGWRCQNVHSAG*CGVLISMVGPA
Trigger: AGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CAA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCT +
Preference number: 3 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSTGAKG*GRDLVS
Trigger: AGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR-3UTR CAA 90 bp AGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 3 (lower is better)
Translates to: SERAPLYFLTTLLPQLCPLVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...AGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR TCA 72 bp CAATTAGCGATTACCACAATATTGACCACAACTGCATaGGACCAGGGAAAAGCAAGATCAGTGAGGGGCAAG +
Preference number: 3 (lower is better)
Translates to: QLAITTILTTTA*DQGKARSVRGK
Trigger: CTTGCCCCTCACTGATCTTGCTTTTCCCTGGTCTCATGCAGTTGTGGTCAATATTGTGGTAATCGCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
3UTR GCA 72 bp AGTACAATTAGCGATTACCACAATATTGACCACAACTaGATGAGACCAGGGAAAAGCAAGATCAGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: STISDYHNIDHN*MRPGKSKISEG
Trigger: CCCCTCACTGATCTTGCTTTTCCCTGGTCTCATGCAGTTGTGGTCAATATTGTGGTAATCGCTAATTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR GCA 90 bp GGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGCGCTCCCCCAACACCTaGCGCCCGGTCCGCGACACC +
Preference number: 4 (lower is better)
Translates to: GLLAWPWLRGWDGAVPTLRSPNT*RPVRDT
Trigger: GGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCG...CAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCTGGGGGCTCGCTGCCTaGGCTCCCCCAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: HGGACWHGPGFGAGMVLSWGLAA*APPTPA
Trigger: GGCAGGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCA...GGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCTGGGGCCTGCTGGCATaGCCCTGGCTTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HGGACWHGPGFGAGMVLSWGLLA*PWLRGW
Trigger: CCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA...GGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGGCGTGGGGGCTCGCTGCCTaGGCTCCCCCAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: RHTGTRLVLHQDSGRRLAWGLAA*APPTPA
Trigger: GGCAGGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCA...CGCCAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGGCGTGGGGCCTGCTGGCATaGCCCTGGCTTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RHTGTRLVLHQDSGRRLAWGLLA*PWLRGW
Trigger: CCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA...CGCCAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGCGCTCCCCCAACACCTaGCGCCCGGTCCGCGACACC +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRRSPNT*RPVRDT
Trigger: GGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCG...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp TCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: SMVGPAGMALASGLGWCCGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...ACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp ACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGCTGCCGCAGCCGCGGTaGCCGCGCCTTAAGTACCCG +
Preference number: 4 (lower is better)
Translates to: TFLRGTGSRAGRDAQEHLLPQPR*PRLKYP
Trigger: CGGGTACTTAAGGCGCGGCCACCGCGGCTGCGGCAG...CAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS-3UTR CCA 90 bp TCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCTACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: SRAGRDAQEHLMIRPPRATAAQG*ELGPQL
Trigger: CAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGT...AGCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GGACWHGPGFGAGMVLSRHWLPC*PRCTGA
Trigger: TGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG...TCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCTGCTGGCATGGCCCTaGCTTCGGGGCTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: HGGACWHGPGFGAGMVLSLLAWP*LRGWDG
Trigger: ACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAG...GGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TCCCGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: SRHTGTRLVLHQDSGRRLQLGAR*LRSPNT
Trigger: GGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...CAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCTCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: SRAGRDAQEHLMIRPPRAQLGAR*LRSPNT
Trigger: GGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...AGCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR TCA 90 bp CATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCGGGCTTGGGAGGCAGTaGGGAGGAAAGGGGAATCGA +
Preference number: 4 (lower is better)
Translates to: HGGACWHGPGFGAGMVLSGLGRQ*GGKGNR
Trigger: TCGATTCCCCTTTCCTCCTCACTGCCTCCCAAGCCC...GGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGAGCTGGGGCCTCAGTTaGGGGCTCGCTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRSWGLS*GLAACA
Trigger: AGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCT...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTGACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: AGWCGVLISMVGPAGMALTAAQG*ELGPQL
Trigger: CAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGT...CAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTGCTTCGGGGCTGGGATaGTGCTGTCCCGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: WGLLAWPWLRGWDGAVPTASGLG*CCPDFV
Trigger: GACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGC...AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTCCCTGGCTTCGGGGCTaGGATGGTGCTGTCCCGACT +
Preference number: 4 (lower is better)
Translates to: QRGWNASALGKGQREGPTPWLRG*DGAVPT
Trigger: AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG...AGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCTCCCTGGCTTCGGGGCTaGGATGGTGCTGTCCCGACT +
Preference number: 4 (lower is better)
Translates to: SRAGRDAQEHLMIRPPRAPWLRG*DGAVPT
Trigger: AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG...AGCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TCCCGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGCTGCTGGCATGGCCCTaGCTTCGGGGCTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: SRHTGTRLVLHQDSGRRLLLAWP*LRGWDG
Trigger: ACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAG...CAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGCATGGTGGGGCCTGCTaGCATGGCCCTGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRHGGAC*HGPGFG
Trigger: CCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTGGAATGCAAGTGCCCTaGGCAAGGGACAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: WGLLAWPWLRGWDGAVPTGMQVP*ARDSER
Trigger: CCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCC...AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGTGCACCGCAGGGTCCTaGGACACTGTGCGAGACAGG +
Preference number: 4 (lower is better)
Translates to: DPTFLRGTGSRAGRDAQECTAGS*DTVRDR
Trigger: CCTGTCTCGCACAGTGTCCCAGGACCCTGCGGTGCA...CTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR GCA 90 bp TCCCGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGCGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SRHTGTRLVLHQDSGRRLRGRRH*RHGSKN
Trigger: ATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCG...CAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: AGWCGVLISMVGPAGMALGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...CAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: GGACWHGPGFGAGMVLSRRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...TCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGCTCCTTCCTCAACTGTaGCCTCCAGTCCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLLAWPWLRGWDGAVPTLLLPQL*PPVPPH
Trigger: GTGTGGCGGGACTGGAGGGCACAGTTGAGGAAGGAG...CAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTGCCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLLAWPWLRGWDGAVPTLCQVLL*RGNTGD
Trigger: GTCCCCTGTGTTCCCTCGCCAGAGGAGCACTTGGCA...CAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR TCA 90 bp ACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGCTACTGGCCCCTCACTaGCCTTGCCAAGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TFLRGTGSRAGRDAQEHLLLAPH*PCQVLL
Trigger: GAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAG...CAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR TCA 90 bp TCCCGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGGGGCTTGGGAGGCAGTaGGGAGGAAAGGGGAATCGA +
Preference number: 4 (lower is better)
Translates to: SRHTGTRLVLHQDSGRRLGLGRQ*GGKGNR
Trigger: TCGATTCCCCTTTCCTCCTCACTGCCTCCCAAGCCC...CAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LPCWPRCTGAPDDTAAQGPRHRV*QLLQGV
Trigger: TACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGG...GCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGCGAGGGAACACAGGGGACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTCCGTGCTGGCCGAGATaGACAGGAGCACCTGATGAT +
Preference number: 4 (lower is better)
Translates to: WRGNTGDPTFLRGTGSRAPCWPR*TGAPDD
Trigger: ATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGG...AGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CCGGGGGTCTACTGGCCCCTCACTGACCTTGCCAAGTGCTCCTCTGGCGAGGGACAGGCACGCGGTTGGTaGTGCACCAAGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGVYWPLTDLAKCSSGEGQARGW*CTKIQG
Trigger: GCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTG...TCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAGACCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCTCCTTCCTCAACTGTaGCCTCCAGTCCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: HWLPCWPRCTGAPDDTAALLPQL*PPVPPH
Trigger: GTGTGGCGGGACTGGAGGGCACAGTTGAGGAAGGAG...GGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp ACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGCTCCTTCCTCAACTGTaGCCTCCAGTCCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: TFLRGTGSRAGRDAQEHLLLPQL*PPVPPH
Trigger: GTGTGGCGGGACTGGAGGGCACAGTTGAGGAAGGAG...CAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTCATTCCAGGAACACCTaGAGCAGCACGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: WGLLAWPWLRGWDGAVPTHSRNT*SSTRKM
Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCCTGGAATG...AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCAGCTGGGGCCTCAGTTaGGGGCTCGCTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RESKCSEAGMQVPWARDSSWGLS*GLAACA
Trigger: AGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCT...GCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATAGCTGGGGCCTCAGTTaGGGGCTCGCTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RPCPLVGPVQRGWEGIWYSWGLS*GLAACA
Trigger: AGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCT...ATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp AGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGTGGGGCCTGCTGGCATaGCCCTGGCTTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RFRASAGDVRMSILLAGAWGLLA*PWLRGW
Trigger: CCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA...CGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TCCCGCCACACAGGCACGCGGTTGGTGCTGCACCAAGATTCAGGGCGTCGGCTGGGAATGCAAGTGCCCTaGGCAAGGGACAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRHTGTRLVLHQDSGRRLGMQVP*ARDSER
Trigger: CCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCC...CAGCCGACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGTGGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR TCA 90 bp GGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCTGCAGGGAGTACCTaGACACTTCTCGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: GLLAWPWLRGWDGAVPTLSAGST*TLLAMG
Trigger: GCCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGA...CAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649309.1
CDS-3UTR GCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGCGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLRGRRH*RHGSKN
Trigger: ATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCG...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCGCTCCCCCAACACCTaGCGCCCGGTCCGCGACACC +
Preference number: 4 (lower is better)
Translates to: DSERAPLYFLTTLLPQLCRSPNT*RPVRDT
Trigger: GGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCG...GCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCTGGGGGCTCGCTGCCTaGGCTCCCCCAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: KIQGVGWRCQNVHSAGWCWGLAA*APPTPA
Trigger: GGCAGGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCA...GCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LASGLGWCCPDFVQIRMRRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...CCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: LPCWPRCTGAPDDTAAQGTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...GCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: WGLLAWPWLRGWDGAVPTQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGTCGGGGCTGGGATGGTaGTGTCCCGACTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRSGLGW*CPDFVQ
Trigger: CTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGA...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGGCACGCGGTTGGTGCTaGACCAAGATTCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LLSRPCPLVGPVQRGWEGARGWC*TKIQGV
Trigger: GACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGC...CCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGCGAGGGAACACAGGGGACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTCATTCCAGGAACACCTaGAGCAGCACGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: WRGNTGDPTFLRGTGSRAHSRNT*SSTRKM
Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCCTGGAATG...AGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGATCCAAGAATGGTAGGTaGGTGGTCGAGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GGACWHGPGFGAGMVLSRSKNGR*VVEKEG
Trigger: ACCCTCTTTCTCGACCACCCACCTACCATTCTTGGA...TCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGAGCTGGGGCCTCAGTTaGGGGCTCGCTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RFRASAGDVRMSILLAGASWGLS*GLAACA
Trigger: AGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCT...CGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGTAAQG*ELGPQL
Trigger: CAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGT...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp CTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGCTGCTGGCATGGCCCTaGCTTCGGGGCTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: LASGLGWCCPDFVQIRMRLLAWP*LRGWDG
Trigger: ACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAG...CCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTACTGCTGGCATGGCCCTaGCTTCGGGGCTGGGATGGT +
Preference number: 4 (lower is better)
Translates to: STLPLSGTGAKGLGRDLVLLAWP*LRGWDG
Trigger: ACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAG...TACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGACACAGGCACGCGGTTaGTGCTGCACCAAGATTCAG +
Preference number: 4 (lower is better)
Translates to: GLLAWPWLRGWDGAVPTLTQARG*CCTKIQ
Trigger: CTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGT...CAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACAAATGCAGCGAGGCTaGAATGCAAGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSEAGMQVPWARDSERAPQMQRG*NASALG
Trigger: GCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTG...TGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CCGGGGGTCTACTGGCCCCTCACTGACCTTGCCAAGTGCTCCTCTGGCGAGGGAGGAGTAGGGTGGGCTTaGGAGGCAGTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PGVYWPLTDLAKCSSGEGGVGWA*EAVRRK
Trigger: TTTCCTCCTCACTGCCTCCCAAGCCCACCCTACTCC...TCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAGACCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTTCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: FPWWGLLAWPWLRGWDGASRKRV*RDPLVS
Trigger: CGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGA...AGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRPRHRV*QLLQGV
Trigger: TACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGG...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp AATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACTGGGGGCTCGCTGCCTaGGCTCCCCCAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: NASALGKGQREGPTVFLNWGLAA*APPTPA
Trigger: GGCAGGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCA...GTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTTGGGGGCTCGCTGCCTaGGCTCCCCCAACACCTGCC +
Preference number: 4 (lower is better)
Translates to: WDRCKGVGKGSGIFVIVGWGLAA*APPTPA
Trigger: GGCAGGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCA...ACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACACAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: IERANAARLECKCPGQGTQLGAR*LRSPNT
Trigger: GGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGTCTACTGGCCCCTCACTGACCCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SSSLSVLLLRGSTGPSLTRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...GGTCAGTGAGGGGCCAGTAGACCCCCGGAGAAGCAGTACCGACAATGACGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QRGWNASALGKGQREGPTTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...AGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTACTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: STLPLSGTGAKGLGRDLVLLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...TACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGCACGCGGTTGGTGCTaGACCAAGATTCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLARGWC*TKIQGV
Trigger: GACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGC...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCACTCGGAGTCCGCTGTTaGGCGCACTGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GAVPTLSRSECGAYAQISLGVRC*AHCRSR
Trigger: GCGGCTGCGGCAGTGCGCCCAACAGCGGACTCCGAG...TGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS-3UTR CCA 90 bp GAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATGCTTCGGGGCTGGGATaGTGCTGTCCCGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: EAGMQVPWARDSERAPLYASGLG*CCPDFV
Trigger: GACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGC...ATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTCCCTGGCTTCGGGGCTaGGATGGTGCTGTCCCGACT +
Preference number: 4 (lower is better)
Translates to: LECKCPGQGTARGPHCISPWLRG*DGAVPT
Trigger: AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACTGGGGCCTGCTGGCATaGCCCTGGCTTCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NASALGKGQREGPTVFLNWGLLA*PWLRGW
Trigger: CCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCA...GTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CATTCTGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGCATGGTGGGGCCTGCTaGCATGGCCCTGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: HSAGWCGVLISMVGPAGMHGGAC*HGPGFG
Trigger: CCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG...CATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACACATGGTGGGGCCTGCTaGCATGGCCCTGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: IERANAARLECKCPGQGTHGGAC*HGPGFG
Trigger: CCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCGTCCATTCTGCTGGCTaGTGCGGTGTTTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: HGGACWHGPGFGAGMVLSVHSAG*CGVLIS
Trigger: GGAAATCAAAACACCGCACCAGCCAGCAGAATGGAC...GGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCATTCAGGGCGTCGGCTaGCGATGTCAGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LPCWPRCTGAPDDTAAQGIQGVG*RCQNVH
Trigger: ATGGACATTCTGACATCGCCAGCCGACGCCCTGAAT...GCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGGAATGCAAGTGCCCTaGGCAAGGGACAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGWCGVLISMVGPAGMALGMQVP*ARDSER
Trigger: CCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCC...CAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGAGGAGTAGGGTGGGCTTaGGAGGCAGTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LAWPWLRGWDGAVPTLSRGVGWA*EAVRRK
Trigger: TTTCCTCCTCACTGCCTCCCAAGCCCACCCTACTCC...TCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGTCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRSRKRV*RDPLVS
Trigger: CGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGA...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp AAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGCGCTCCCCCAACACCTaGCGCCCGGTCCGCGACACC +
Preference number: 4 (lower is better)
Translates to: KGVGKGSGIFVIVGTASPRSPNT*RPVRDT
Trigger: GGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCG...CGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: ARDSERAPLYFLTTLLPQQLGAR*LRSPNT
Trigger: GGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...TTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RGWEGIWYLRHCRYCFSGGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...CCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGAGAATGCGGTGCCTATaGCCAGATCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRRMRCL*PDLRGL
Trigger: CAGACCCCTGAGATCTGGGCATAGGCACCGCATTCT...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGCACGCGGTTGGTGCTaGACCAAGATTCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RESKCSEAGMQVPWARDSARGWC*TKIQGV
Trigger: GACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGC...GCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTACAGGCACGCGGTTGGTaGTGCACCAAGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: STLPLSGTGAKGLGRDLVQARGW*CTKIQG
Trigger: GCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTG...TACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGAGCTGGGGCCTCAGTTaGGGGCTCGCTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GQREGPTVFLNHPPSSTVSWGLS*GLAACA
Trigger: AGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCT...CACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CATTCTGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGCCCTGGCTTCGGGGCTaGGATGGTGCTGTCCCGACT +
Preference number: 4 (lower is better)
Translates to: HSAGWCGVLISMVGPAGMPWLRG*DGAVPT
Trigger: AGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG...CATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCATGGTGGGGCCTGCTaGCATGGCCCTGGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GQREGPTVFLNHPPSSTVHGGAC*HGPGFG
Trigger: CCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATG...CACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTGTCCATTCTGCTGGCTaGTGCGGTGTTTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: SMVGPAGMALASGLGWCCVHSAG*CGVLIS
Trigger: GGAAATCAAAACACCGCACCAGCCAGCAGAATGGAC...ACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGCAAATGCAGCGAGGCTaGAATGCAAGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLQMQRG*NASALG
Trigger: GCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTG...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTTATTTTGGAGTAGGGTaGGCTTGGGAGGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FPWWGLLAWPWLRGWDGAYFGVG*AWEAVR
Trigger: CCTCACTGCCTCCCAAGCCCACCCTACTCCAAAATA...AGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
3UTR CAA 72 bp CCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGTGCCTATGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: PWLRGWDGAVPT*SRSECGAYAQI
Trigger: GATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR TCA 90 bp AGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGTTTTCTGCAGGGAGTACCTaGACACCTGCAGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: RASAGDVRMSILLAGAVFSAGST*TPAAAR
Trigger: GCGTGCTGCTGCAGGTGTTCAGGTACTCCCTGCAGA...AAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS-3UTR GCA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACACGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: IERANAARLECKCPGQGTRGRRH*RHGSKN
Trigger: ATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCG...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: ALGKGQREGPTVFLNHPPPRHRV*QLLQGV
Trigger: TACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGG...AGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCGCTCCCCCAACACCTaGCGCCCGGTCCGCGACACC +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASRSPNT*RPVRDT
Trigger: GGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCG...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp ACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCAGTTGGGGGCTCGCTaGCTGCGCTCCCCCAACACC +
Preference number: 4 (lower is better)
Translates to: TGAKGLGRDLVSSSLSVLQLGAR*LRSPNT
Trigger: GGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG...CAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCGGCACTGGCTCCCGTaGTGGCCGAGATGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SERAPLYFLTTLLPQLCPRHWLP*WPRCTG
Trigger: TCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCG...AGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTGGGACCCCACATTCCTaGGCGGCACTGGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSGTPHS*AALAPV
Trigger: CACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCC...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLSRPCPLVGPVQRGWEGQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...CCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGACAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAWPWLRGWDGAVPTLSRQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...TCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCTCAGGCACGCGGTTGGTaGTGCACCAAGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: CPDQNAVPMPRSQGSAPPQARGW*CTKIQG
Trigger: GCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTG...AGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp ACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGAGAATGGTAGGTGGGTaGTCGAGAAAGAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TFLRGTGSRAGRDAQEHLRMVGG*SRKRVC
Trigger: GCAAACCCTCTTTCTCGACCACCCACCTACCATTCT...CAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCTAGAATGGTAGGTGGGTaGTCGAGAAAGAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SRAGRDAQEHLMIRPPRARMVGG*SRKRVC
Trigger: GCAAACCCTCTTTCTCGACCACCCACCTACCATTCT...AGCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: QRGWEGIWYLRHCRYCFSTAAQG*ELGPQL
Trigger: CAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGT...GGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTG +
Preference number: 4 (lower is better)
Translates to: GAKGLGRDLVSSSLSVLLTAAQG*ELGPQL
Trigger: CAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGT...AAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp CATTCTGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HSAGWCGVLISMVGPAGMHWLPC*PRCTGA
Trigger: TGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG...CATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGHWLPC*PRCTGA
Trigger: TGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp AGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGATGCCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC +
Preference number: 4 (lower is better)
Translates to: REQMQRGWNASALGKGQRCQVLL*RGNTGD
Trigger: GTCCCCTGTGTTCCCTCGCCAGAGGAGCACTTGGCA...TCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATACACAGGCACGCGGTTaGTGCTGCACCAAGATTCAG +
Preference number: 4 (lower is better)
Translates to: EAGMQVPWARDSERAPLYTQARG*CCTKIQ
Trigger: CTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGT...ATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTGACACAGGCACGCGGTTaGTGCTGCACCAAGATTCAG +
Preference number: 4 (lower is better)
Translates to: AGWCGVLISMVGPAGMALTQARG*CCTKIQ
Trigger: CTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGT...CAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGTTTGGAATGCAAGTGCCCTaGGCAAGGGACAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: RASAGDVRMSILLAGAVFGMQVP*ARDSER
Trigger: CCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCC...AAACACCGCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTCAAATGCAGCGAGGCTaGAATGCAAGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLECKCPGQGTARGPHCIQMQRG*NASALG
Trigger: GCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTG...AATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGTGCACCGCAGGGTCCTaGGACACTGTGCGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGCTAGS*DTVRDR
Trigger: CCTGTCTCGCACAGTGTCCCAGGACCCTGCGGTGCA...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR TCA 90 bp CATTCTGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGCTACTGGCCCCTCACTaGCCTTGCCAAGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HSAGWCGVLISMVGPAGMLLAPH*PCQVLL
Trigger: GAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAG...CATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR TCA 90 bp CCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCGGGCTTGGGAGGCAGTaGGGAGGAAAGGGGAATCGA +
Preference number: 4 (lower is better)
Translates to: PTLSRSECGAYAQISGVCGLGRQ*GGKGNR
Trigger: TCGATTCCCCTTTCCTCCTCACTGCCTCCCAAGCCC...GCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NASALGKGQREGPTVFLNRGRRH*RHGSKN
Trigger: ATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCG...GTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGACCGTGCTGGCCGAGATaGACAGGAGCACCTGATGAT +
Preference number: 4 (lower is better)
Translates to: REQMQRGWNASALGKGQRPCWPR*TGAPDD
Trigger: ATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGG...TCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCCGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: RESKCSEAGMQVPWARDSRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...GCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTACGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: STLPLSGTGAKGLGRDLVRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...TACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: RPCPLVGPVQRGWEGIWYRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...ATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp AGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGCTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: RGWEGIWYLRHCRYCFSGLLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...CCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCAGAATGCGGTGCCTATaGCCAGATCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PWLRGWDGAVPTLSRSECRMRCL*PDLRGL
Trigger: CAGACCCCTGAGATCTGGGCATAGGCACCGCATTCT...GCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACATCGGGGCTGGGATGGTaGTGTCCCGACTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IERANAARLECKCPGQGTSGLGW*CPDFVQ
Trigger: CTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGA...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGCAGGCACGCGGTTGGTaGTGCACCAAGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WDGAVPTLSRSECGAYAQQARGW*CTKIQG
Trigger: GCCCTGAATCTTGGTGCAGCACCAACCGCGTGCCTG...CTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGCTCCTTCCTCAACTGTaGCCTCCAGTCCCGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGLLPQL*PPVPPH
Trigger: GTGTGGCGGGACTGGAGGGCACAGTTGAGGAAGGAG...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGATTTGCCGAGATCCGCTaGTCTCGGAGTCCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: REQMQRGWNASALGKGQRFAEIR*SRSPLL
Trigger: CAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAA...TCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GQREGPTVFLNHPPSSTVHWLPC*PRCTGA
Trigger: TGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG...CACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGTGCCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGCQVLL*RGNTGD
Trigger: GTCCCCTGTGTTCCCTCGCCAGAGGAGCACTTGGCA...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp CCTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGGTTGGGAAGGGATCTaGTATCTTCGTCATTGTCGG +
Preference number: 4 (lower is better)
Translates to: PPLSTLPLSGTGAKGLGRGWEGI*YLRHCR
Trigger: CCGACAATGACGAAGATACCAGATCCCTTCCCAACC...CCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp CCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCACACAGGCACGCGGTTaGTGCTGCACCAAGATTCAG +
Preference number: 4 (lower is better)
Translates to: PWLRGWDGAVPTLSRSECTQARG*CCTKIQ
Trigger: CTGAATCTTGGTGCAGCACCAACCGCGTGCCTGTGT...GCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR TCA 90 bp CCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCCTACTGGCCCCTCACTaGCCTTGCCAAGTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PVQRGWEGIWYLRHCRYCLLAPH*PCQVLL
Trigger: GAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAG...GCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp AGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGATCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: REQMQRGWNASALGKGQRSRKRV*RDPLVS
Trigger: CGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGA...TCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LECKCPGQGTARGPHCISSRKRV*RDPLVS
Trigger: CGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGA...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCGAGTACCTGAACACCTaGAGCAGCACGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LGKGQREGPTVFLNHPPSEYLNT*SSTRKM
Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCAGGTACTC...GGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS-3UTR GCA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGPRHRV*QLLQGV
Trigger: TACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGG...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QVPWARDSERAPLYFLTTTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...GGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCTACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: CPDQNAVPMPRSQGSAPPTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...AGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSLLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGTTGTCCAGATCAGAATaGGGTGCCTATGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLLSRSE*GAYAQI
Trigger: GATCTGGGCATAGGCACCGCATTCTGATCTGGACAA...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTTCGGGGCTGGGATGGTaGTGTCCCGACTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SERAPLYFLTTLLPQLCPSGLGW*CPDFVQ
Trigger: CTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGA...AGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGTCGGGGCTGGGATGGTaGTGTCCCGACTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGWEGIWYLRHCRYCFSGSGLGW*CPDFVQ
Trigger: CTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGA...CCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTCCTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGCATTCTGCTGGCTGGTaGGGTGTTTTGATTTCCATG +
Preference number: 4 (lower is better)
Translates to: LLSRPCPLVGPVQRGWEGHSAGW*GVLISM
Trigger: CATGGAAATCAAAACACCGCACCAGCCAGCAGAATG...CCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGCACGCGGTTGGTGCTaGACCAAGATTCAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GAVPTLSRSECGAYAQISARGWC*TKIQGV
Trigger: GACGCCCTGAATCTTGGTGCAGCACCAACCGCGTGC...TGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp ACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGACCCAGGACCCACCCTaGAGCAGCACGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: TGAKGLGRDLVSSSLSVLTQDPP*SSTRKM
Trigger: CATCTTCCGCGTGCTGCTGCAGGGTGGGTCCTGGGT...CAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS-3UTR CCA 90 bp CATTCTGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGTTTGCCGAGATCCGCTaGTCTCGGAGTCCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HSAGWCGVLISMVGPAGMFAEIR*SRSPLL
Trigger: CAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAA...CATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTTTGCCGAGATCCGCTaGTCTCGGAGTCCGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PTLSRSECGAYAQISGVCFAEIR*SRSPLL
Trigger: CAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAA...GCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGAGAATGGTAGGTGGGTaGTCGAGAAAGAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLRMVGG*SRKRVC
Trigger: GCAAACCCTCTTTCTCGACCACCCACCTACCATTCT...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCTGCCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DSERAPLYFLTTLLPQLCCQVLL*RGNTGD
Trigger: GTCCCCTGTGTTCCCTCGCCAGAGGAGCACTTGGCA...GCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGGTTGGGAAGGGATCTaGTATCTTCGTCATTGTCGG +
Preference number: 4 (lower is better)
Translates to: LSTLPLSGTGAKGLGRDLGWEGI*YLRHCR
Trigger: CCGACAATGACGAAGATACCAGATCCCTTCCCAACC...CAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp AGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGCTTCGGGGCTGGGATaGTGCTGTCCCGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: RGWEGIWYLRHCRYCFSGASGLG*CCPDFV
Trigger: GACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGC...CCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATATTCAGGGCGTCGGCTaGCGATGTCAGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: RPCPLVGPVQRGWEGIWYIQGVG*RCQNVH
Trigger: ATGGACATTCTGACATCGCCAGCCGACGCCCTGAAT...ATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTATTCAGGGCGTCGGCTaGCGATGTCAGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: CWLVRCFDFHGGACWHGPIQGVG*RCQNVH
Trigger: ATGGACATTCTGACATCGCCAGCCGACGCCCTGAAT...AGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGCAAATGCAGCGAGGCTaGAATGCAAGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGQMQRG*NASALG
Trigger: GCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTG...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCCTCACTTCTCGCAATaGGCTGTGTCCCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GWDGAVPTLSRSECGAYAPHFSQ*AVSLED
Trigger: ATCCTCCAGGGACACAGCCCATTGCGAGAAGTGAGG...GGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649451.1
3UTR CAA 72 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGGGGGTCTACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AKGLGRDLVSSS*SVLLLRGSTGP
Trigger: GGGGCCAGTAGACCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: AKGLGRDLVSSSLSVLLLRGRRH*RHGSKN
Trigger: ATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCG...GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCGTGCTGGCCGAGATaGACAGGAGCACCTGATGAT +
Preference number: 4 (lower is better)
Translates to: GQREGPTVFLNHPPSSTVPCWPR*TGAPDD
Trigger: ATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGG...CACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTCCAGTCCGTGCTGGCCGAGATaGACAGGAGCACCTGATGAT +
Preference number: 4 (lower is better)
Translates to: EGPTVFLNHPPSSTVPSSPCWPR*TGAPDD
Trigger: ATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGG...ACTGGAGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGACTGACCTTGCCAAGTaGTCCTCTGGCGAGGGAACA +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGTDLAK*SSGEGT
Trigger: TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGT...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp AAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCCGTCATTGTCGGTACTaGTTCTCCGGGGGTCTACTG +
Preference number: 4 (lower is better)
Translates to: KIQGVGWRCQNVHSAGWCRHCRY*FSGGLL
Trigger: CAGTAGACCCCCGGAGAAGCAGTACCGACAATGACG...GCACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: GAKGLGRDLVSSSLSVLLLLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...AAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GAATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACATTCCAGGAACACCTaGAGCAGCACGCGGAAGATG +
Preference number: 4 (lower is better)
Translates to: ESREQMQRGWNASALGKGHSRNT*SSTRKM
Trigger: CATCTTCCGCGTGCTGCTGCAGGTGTTCCTGGAATG...TCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCAAGAATGGTAGGTaGGTGGTCGAGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ALGKGQREGPTVFLNHPPSKNGR*VVEKEG
Trigger: ACCCTCTTTCTCGACCACCCACCTACCATTCTTGGA...AGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTGCTTCGGGGCTGGGATaGTGCTGTCCCGACTTTGTC +
Preference number: 4 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSASGLG*CCPDFV
Trigger: GACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGC...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LSRPCPLVGPVQRGWEGIECPFC*LVRCFD
Trigger: ATCAAAACACCGCACCAGCCAGCAGAATGGACATTC...GATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCTATTCAGGGCGTCGGCTaGCGATGTCAGAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: CPDQNAVPMPRSQGSAPPIQGVG*RCQNVH
Trigger: ATGGACATTCTGACATCGCCAGCCGACGCCCTGAAT...AGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
3UTR CAA 72 bp TCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTA +
Preference number: 4 (lower is better)
Translates to: STLPLSGTGAKG*GRDLVSSSLSV
Trigger: TACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
3UTR CAA 72 bp TGTCAGAATGTCCATTCTGCTGGCTGGTGCGGTGTTTaGATTTCCATGGTGGGGCCTGCTGGCATGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CQNVHSAGWCGV*ISMVGPAGMAL
Trigger: CAGGGCCATGCCAGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATTCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCTCCTCTCTCGACCCTaGCCCTTAGTGGGACCGGTG +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASLLSRP*PLVGPV
Trigger: CACCGGTCCCACTAAGGGGCAGGGTCGAGAGAGGAG...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTTGTCCAGATCAGAATaGGGTGCCTATGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: LECKCPGQGTARGPHCISLSRSE*GAYAQI
Trigger: GATCTGGGCATAGGCACCGCATTCTGATCTGGACAA...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTCATTCTGCTGGCTGGTaGGGTGTTTTGATTTCCATG +
Preference number: 4 (lower is better)
Translates to: ALGKGQREGPTVFLNHPPHSAGW*GVLISM
Trigger: CATGGAAATCAAAACACCGCACCAGCCAGCAGAATG...AGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CCCTGGCTTCGGGGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCAATCGAGAGAGCAAATaGAGCGAGGCTGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: PWLRGWDGAVPTLSRSECNRESK*SEAGMQ
Trigger: TTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATT...GCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCCCCGAAGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTGAGTACCTGAACACCTaGGACGAGAAACCCAGGACC +
Preference number: 4 (lower is better)
Translates to: WDRCKGVGKGSGIFVIVGEYLNT*DEKPRT
Trigger: GGTCCTGGGTTTCTCGTCGCAGGTGTTCAGGTACTC...ACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS-3UTR CCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCACTGGCTCCCGTGCTaGCCGAGATGCACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASHWLPC*PRCTGA
Trigger: TGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp TGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: WDGAVPTLSRSECGAYAQPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...CTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGGAGTAGGGTGGGCTTaGGAGGCAGTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: DRCKGVGKGSGIFVIVGTGVGWA*EAVRRK
Trigger: TTTCCTCCTCACTGCCTCCCAAGCCCACCCTACTCC...AGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCAGTGACACATTATTTTaGAGTAGGGTGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LSRPCPLVGPVQRGWEGISDTLF*SRVGLG
Trigger: TCCCAAGCCCACCCTACTCCAAAATAATGTGTCACT...GATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGGTCTACTGGCCCCTCACTGACCTTGCCAAGTGCTCCTCTGGCGAGGGAACAAGTGACACATTATTTTaGAGTAGGGTGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GVYWPLTDLAKCSSGEGTSDTLF*SRVGLG
Trigger: TCCCAAGCCCACCCTACTCCAAAATAATGTGTCACT...TGTTCCCTCGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCCAGTAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: AKGLGRDLVSSSLSVLLLPRHRV*QLLQGV
Trigger: TACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGG...GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp TGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGTTGTCCAGATCAGAATaGGGTGCCTATGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: WDGAVPTLSRSECGAYAQLSRSE*GAYAQI
Trigger: GATCTGGGCATAGGCACCGCATTCTGATCTGGACAA...CTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTCAGAATGTCCATTCTaGTGGCTGGTGCGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LECKCPGQGTARGPHCISSECPF*WLVRCF
Trigger: AAAACACCGCACCAGCCAGCAGAATGGACATTCTGA...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCAATCGAGAGAGCAAATaGAGCGAGGCTGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: LSRSECGAYAQISGVCSPNRESK*SEAGMQ
Trigger: TTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATT...GGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGAGAATGGTAGGTGGGTaGTCGAGAAAGAGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGRMVGG*SRKRVC
Trigger: GCAAACCCTCTTTCTCGACCACCCACCTACCATTCT...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTTGCCAAGTGCTCCTCTaGCGAGGGAACACAGGGGAC +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASCQVLL*RGNTGD
Trigger: GTCCCCTGTGTTCCCTCGCCAGAGGAGCACTTGGCA...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGGGTTGGGAAGGGATCTaGTATCTTCGTCATTGTCGG +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGGWEGI*YLRHCR
Trigger: CCGACAATGACGAAGATACCAGATCCCTTCCCAACC...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: GWCCPDFVQIRMRCLCPDPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...ATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: GQREGPTVFLNHPPSSTVPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...CACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: WDRCKGVGKGSGIFVIVGPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...ACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGGTCCATTCTGCTGGCTaGTGCGGTGTTTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGVHSAG*CGVLIS
Trigger: GGAAATCAAAACACCGCACCAGCCAGCAGAATGGAC...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: REQMQRGWNASALGKGQRNGLCP*RISKSE
Trigger: TTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATT...TCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp CTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAA +
Preference number: 4 (lower is better)
Translates to: LGKGQREGPTVFLNHPPSNGLCP*RISKSE
Trigger: TTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATT...GGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649309.1
ENST00000649451.1
CDS-3UTR TCA 90 bp TGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGGGGTCTGCTCCCCCTCGATTACCACAATATTaGCCACAACTGCATGAGACC +
Preference number: 4 (lower is better)
Translates to: CPDQNAVPMPRSQGSAPPRLPQY*PQLHET
Trigger: GGTCTCATGCAGTTGTGGTCAATATTGTGGTAATCG...AGGGGGAGCAGACCCCTGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR TCA 90 bp GGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTTCTGCAGGGAGTACCTaGACACCTGCGACGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GAKGLGRDLVSSSLSVLLSAGST*TPATRN
Trigger: GTTTCTCGTCGCAGGTGTTCAGGTACTCCCTGCAGA...AAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS-3UTR GCA 90 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCAGAATGCGGTGCCTATaGCCAGATCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AKGLGRDLVSSSLSVLLLRMRCL*PDLRGL
Trigger: CAGACCCCTGAGATCTGGGCATAGGCACCGCATTCT...GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGAGAATGCGGTGCCTATaGCCAGATCTCAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KGVGKGSGIFVIVGTASPRMRCL*PDLRGL
Trigger: CAGACCCCTGAGATCTGGGCATAGGCACCGCATTCT...CGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTTGTCCAGATCAGAATaGGGTGCCTATGCCCAGATC +
Preference number: 4 (lower is better)
Translates to: DGAVPTLSRSECGAYAQILSRSE*GAYAQI
Trigger: GATCTGGGCATAGGCACCGCATTCTGATCTGGACAA...GATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGTCTACTGGCCCCATTCTGCTGGCTGGTaGGGTGTTTTGATTTCCATG +
Preference number: 4 (lower is better)
Translates to: GSGIFVIVGTASPGVYWPHSAGW*GVLISM
Trigger: CATGGAAATCAAAACACCGCACCAGCCAGCAGAATG...GGGCCAGTAGACCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGTCAGAATGTCCATTCTaGTGGCTGGTGCGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGSECPF*WLVRCF
Trigger: AAAACACCGCACCAGCCAGCAGAATGGACATTCTGA...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp GCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTAATATTGACCACAACTaGATGAGACCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: ALGKGQREGPTVFLNHPPNIDHN*MRPGKS
Trigger: GCTTTTCCCTGGTCTCATGCAGTTGTGGTCAATATT...AGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR CCA 90 bp AGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGTCCAAGAATGGTAGGTaGGTGGTCGAGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: RGWEGIWYLRHCRYCFSGSKNGR*VVEKEG
Trigger: ACCCTCTTTCTCGACCACCCACCTACCATTCTTGGA...CCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp GGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATGGTTGGGAAGGGATCTaGTATCTTCGTCATTGTCGG +
Preference number: 4 (lower is better)
Translates to: GWCCPDFVQIRMRCLCPDGWEGI*YLRHCR
Trigger: CCGACAATGACGAAGATACCAGATCCCTTCCCAACC...ATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTGGTTGGGAAGGGATCTaGTATCTTCGTCATTGTCGG +
Preference number: 4 (lower is better)
Translates to: WDRCKGVGKGSGIFVIVGGWEGI*YLRHCR
Trigger: CCGACAATGACGAAGATACCAGATCCCTTCCCAACC...ACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CCA 90 bp AATGTCCATTCTGCTGGCTGGTGCGGTGTTTTGATTTCCATGGTGGGGCCTGCTCCGGTGCAAAGGGGTTaGGAAGGGATCTGGTATCTT +
Preference number: 4 (lower is better)
Translates to: NVHSAGWCGVLISMVGPAPVQRG*EGIWYL
Trigger: AAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG...AGCAGGCCCCACCATGGAAATCAAAACACCGCACCAGCCAGCAGAATGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: IERANAARLECKCPGQGTECPFC*LVRCFD
Trigger: ATCAAAACACCGCACCAGCCAGCAGAATGGACATTC...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTTATTTTGGAGTAGGGTaGGCTTGGGAGGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSYFGVG*AWEAVR
Trigger: CCTCACTGCCTCCCAAGCCCACCCTACTCCAAAATA...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR TCA 90 bp GTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCTGCAGGGAGTACCTaGACACCTCACTTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: VQRGWEGIWYLRHCRYCFSAGST*TPHFSQ
Trigger: TTGCGAGAAGTGAGGTGTTCAGGTACTCCCTGCAGA...GAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649451.1
CDS-3UTR GCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTTCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASSRKRV*RDPLVS
Trigger: CGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGA...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCAGATCAGAATGCGGTaGCTATGCCCAGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: AKGLGRDLVSSSLSVLLLQIRMR*LCPDLR
Trigger: CCTGAGATCTGGGCATAGGCACCGCATTCTGATCTG...GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp AGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTCAACTGTGCCCTAATCGAGAGAGCAAATaGAGCGAGGCTGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: SERAPLYFLTTLLPQLCPNRESK*SEAGMQ
Trigger: TTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATT...AGGGCACAGTTGAGGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR GCA 90 bp CCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCAATCGAGAGAGCAAATaGAGCGAGGCTGGAATGCAA +
Preference number: 4 (lower is better)
Translates to: PVQRGWEGIWYLRHCRYCNRESK*SEAGMQ
Trigger: TTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGATT...GCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCAGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: GAVPTLSRSECGAYAQISECPFC*LVRCFD
Trigger: ATCAAAACACCGCACCAGCCAGCAGAATGGACATTC...TGAGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCGAATGTCCATTCTGCTaGCTGGTGCGGTGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: DGAVPTLSRSECGAYAQIECPFC*LVRCFD
Trigger: ATCAAAACACCGCACCAGCCAGCAGAATGGACATTC...GATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTTATTTTGGAGTAGGGTaGGCTTGGGAGGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LVGPVQRGWEGIWYLRHCYFGVG*AWEAVR
Trigger: CCTCACTGCCTCCCAAGCCCACCCTACTCCAAAATA...ACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR TCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTTTGACCACAACTGCATaGGACCAGGGAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSLTTTA*DQGKAR
Trigger: TCTTGCTTTTCCCTGGTCTCATGCAGTTGTGGTCAA...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR TCA 90 bp AGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGCGATTACCACAATATTaGCCACAACTGCATGAGACC +
Preference number: 4 (lower is better)
Translates to: RGWEGIWYLRHCRYCFSGRLPQY*PQLHET
Trigger: GGTCTCATGCAGTTGTGGTCAATATTGTGGTAATCG...CCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS-3UTR GCA 90 bp ATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATCTCATTCTGCTGGCTGGTaGGGTGTTTTGATTTCCATG +
Preference number: 4 (lower is better)
Translates to: MVLSRLCPDQNAVPMPRSHSAGW*GVLISM
Trigger: CATGGAAATCAAAACACCGCACCAGCCAGCAGAATG...AGATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCTCCAAGAATGGTAGGTaGGTGGTCGAGAAAGAGGGT +
Preference number: 4 (lower is better)
Translates to: AKGLGRDLVSSSLSVLLLSKNGR*VVEKEG
Trigger: ACCCTCTTTCTCGACCACCCACCTACCATTCTTGGA...GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR GCA 90 bp CAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCTCAGAATGTCCATTCTaGTGGCTGGTGCGGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QRGWEGIWYLRHCRYCFSSECPF*WLVRCF
Trigger: AAAACACCGCACCAGCCAGCAGAATGGACATTCTGA...GGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTGTCCATTCTGCTGGCTaGTGCGGTGTTTTGATTTCC +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASVHSAG*CGVLIS
Trigger: GGAAATCAAAACACCGCACCAGCCAGCAGAATGGAC...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CCA 90 bp AAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGAGTGACACATTATTTTaGAGTAGGGTGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KGVGKGSGIFVIVGTASPSDTLF*SRVGLG
Trigger: TCCCAAGCCCACCCTACTCCAAAATAATGTGTCACT...CGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR GCA 90 bp TGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTAATATTGACCACAACTaGATGAGACCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: CKGVGKGSGIFVIVGTASNIDHN*MRPGKS
Trigger: GCTTTTCCCTGGTCTCATGCAGTTGTGGTCAATATT...AGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000649451.1
CDS GCA 90 bp GGTTTGCCGAGATCCGCTGGTCTCGGAGTCCGCTGTTGGGCGCACTaGCGCAGCCGCGGTGGCCGCGCCTTAAGTACCCGCCCGCCACCT +
Preference number: 5 (lower is better)
Translates to: GLPRSAGLGVRCWAH*RSRGGRALSTRPPP
Trigger: AGGTGGCGGGCGGGTACTTAAGGCGCGGCCACCGCGGCTGCGGCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS CCA 90 bp TGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCAGGGCTaGGAGCTGGGGCCTCAGTTGGGGGCTCGCTGCCTGCGCTCCCCC +
Preference number: 5 (lower is better)
Translates to: WPRCTGAPDDTAAQG*ELGPQLGARCLRSP
Trigger: GGGGGAGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS GCA 90 bp CCTGCGCTCCCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCTGCAGCAGCACGCG +
Preference number: 5 (lower is better)
Translates to: PALPQHLPPGPRHRV*QLLQGVPEHLQQHA
Trigger: CGCGTGCTGCTGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS CCA 90 bp GAGAAAGAGGGTTTGCCGAGATCCGCTGGTCTCGGAGTCCGCTGTTaGGCGCACTGCCGCAGCCGCGGTGGCCGCGCCTTAAGTACCCGC +
Preference number: 5 (lower is better)
Translates to: EKEGLPRSAGLGVRC*AHCRSRGGRALSTR
Trigger: GCGGGTACTTAAGGCGCGGCCACCGCGGCTGCGGCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS GCA 90 bp CCTGCGCTCCCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCTGCGACGAGAAACC +
Preference number: 5 (lower is better)
Translates to: PALPQHLPPGPRHRV*QLLQGVPEHLRRET
Trigger: GGTTTCTCGTCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS GCA 90 bp CCTGCGCTCCCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACTTCTCGCAATGGGCT +
Preference number: 5 (lower is better)
Translates to: PALPQHLPPGPRHRV*QLLQGVPEHFSQWA
Trigger: AGCCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649309.1
CDS-3UTR CAA 90 bp GCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: AARLECKCPGQGTARGPHVEKEG*PRSAGL
Trigger: GAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGAC...GTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp CTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCGGCCCCTCACTGACCTaGCCAAGTGCTCCTCTGGCG +
Preference number: 5 (lower is better)
Translates to: LSRPCPLVGPVQRGWEGIGPSLT*PSAPLA
Trigger: CGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCC...GATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp TCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTGGCTGGTGCGGTGTTTaGATTTCCATGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: SMVGPAGMALASGLGWCCGWCGV*ISMVGP
Trigger: AGGCCCCACCATGGAAATCAAAACACCGCACCAGCC...ACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS GCA 90 bp CCTGCGCTCCCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCCAGTAAATGCAGCA +
Preference number: 5 (lower is better)
Translates to: PALPQHLPPGPRHRV*QLLQGVPEHPVNAA
Trigger: TGCTGCATTTACTGGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647955.1
CDS GCA 90 bp CCTGCGCTCCCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCTCACTTCTCGCAAT +
Preference number: 5 (lower is better)
Translates to: PALPQHLPPGPRHRV*QLLQGVPEHLTSRN
Trigger: ATTGCGAGAAGTGAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649451.1
CDS CCA 90 bp AGCCGAGGCCGCCGCCACTGCCGCCATGGTTCCAAGAATGGTAGGTaGGTGGTCGAGAAAGAGGGTTTGCCGAGATCCGCTGGTCTCGGA +
Preference number: 5 (lower is better)
Translates to: SRGRRHCRHGSKNGR*VVEKEGLPRSAGLG
Trigger: TCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCACCTACCATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp CGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGGCCCCTCACTGACCTaGCCAAGTGCTCCTCTGGCG +
Preference number: 5 (lower is better)
Translates to: RESKCSEAGMQVPWARDSGPSLT*PSAPLA
Trigger: CGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCC...GCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp TCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGTACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: SMVGPAGMALASGLGWCCTGAKG*GRDLVS
Trigger: AGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT...ACAGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GACCCCACATTCCTGCGCGGCACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: DPTFLRGTGSRAGRDAQETGAKG*GRDLVS
Trigger: AGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT...CTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS GCA 90 bp CGCGACACCGTGTATGCCAGCTTCTGCAGGGAGTACCTGAACACCTaGGACGAGAAACCCAGGACCCACCCTGCAGCAGCACGCGGAAGA +
Preference number: 5 (lower is better)
Translates to: RDTVYASFCREYLNT*DEKPRTHPAAARGR
Trigger: TCTTCCGCGTGCTGCTGCAGGGTGGGTCCTGGGTTTCTCGTCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS-3UTR CAA 90 bp TTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGT +
Preference number: 5 (lower is better)
Translates to: FPWWGLLAWPWLRGWDGAGAVPT*SRSECG
Trigger: ACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC...AGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS GCA 90 bp GCCATGGTTCCAAGAATGGTAGGTGGGTGGTCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCGGAGTCCGCTGTTGGGCGCACTGCC +
Preference number: 5 (lower is better)
Translates to: AMVPRMVGGWSRKRV*RDPLVSESAVGRTA
Trigger: GGCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCACCTACCATTCTTGGAACCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000647955.1
CDS-3UTR CAA 90 bp CTCTCTCGACCCTGCCCCTTAGTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LSRPCPLVGPVQRGWEGIVEKEG*PRSAGL
Trigger: GAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGAC...GATCCCTTCCCAACCCCTTTGCACCGGTCCCACTAAGGGGCAGGGTCGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp ATCGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGGCCCCTCACTGACCTaGCCAAGTGCTCCTCTGGCG +
Preference number: 5 (lower is better)
Translates to: IERANAARLECKCPGQGTGPSLT*PSAPLA
Trigger: CGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCC...TGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GTGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGGGCCCCTCACTGACCTaGCCAAGTGCTCCTCTGGCG +
Preference number: 5 (lower is better)
Translates to: VGPVQRGWEGIWYLRHCRGPSLT*PSAPLA
Trigger: CGCCAGAGGAGCACTTGGCAAGGTCAGTGAGGGGCC...CCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp TTTCCATGGTGGGGCCTGCTGGCATGGCCCTGGCTTCGGGGCTGGGATGGTGCTCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: FPWWGLLAWPWLRGWDGALVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...AGCACCATCCCAGCCCCGAAGCCAGGGCCATGCCAGCAGGCCCCACCATGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp CACTGGCTCCCGTGCTGGCCGAGATGCACAGGAGCACCTGATGATACGGCCGCCCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: HWLPCWPRCTGAPDDTAALVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...GGCGGCCGTATCATCAGGTGCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS GCA 90 bp GATGTACCAGCCGATGATGAGCAGTTCAGCCGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAATGGTAGGTGGGTGGTCGAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: DVPADDEQFSRGRRH*RHGSKNGRWVVEKE
Trigger: CTCTTTCTCGACCACCCACCTACCATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCGGCTGAACTGCTCATCATCGGCTGGTACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp CGAGAGAGCAAATGCAGCGAGGCTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGGCTGGTGCGGTGTTTaGATTTCCATGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: RESKCSEAGMQVPWARDSGWCGV*ISMVGP
Trigger: AGGCCCCACCATGGAAATCAAAACACCGCACCAGCC...GCTGTCCCTTGCCCAGGGCACTTGCATTCCAGCCTCGCTGCATTTGCTCTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp CTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTTCCTGGAGTAGGGTGGGCTaGGGAGGCAGTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LGKGQREGPTVFLNHPPSWSRVG*GGSEEE
Trigger: TTCCTCCTCACTGCCTCCCAAGCCCACCCTACTCCA...GGAAGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CAA 90 bp TCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGTCTACTGGCCCCTCACTGACCGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSSLSVLLLRGSTGPSLTVEKEG*PRSAGL
Trigger: GAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGAC...GGTCAGTGAGGGGCCAGTAGACCCCCGGAGAAGCAGTACCGACAATGACGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GGCTGGGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCGGCTGGTGCGGTGTTTaGATTTCCATGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: GWDGAVPTLSRSECGAYAGWCGV*ISMVGP
Trigger: AGGCCCCACCATGGAAATCAAAACACCGCACCAGCC...GGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp CAAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGTGGAGTAGGGTGGGCTaGGGAGGCAGTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QDSGRRLAMSECPFCWLVWSRVG*GGSEEE
Trigger: TTCCTCCTCACTGCCTCCCAAGCCCACCCTACTCCA...CACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGVEKEG*PRSAGL
Trigger: GAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGAC...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGVEKEG*PRSAGL
Trigger: GAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGAC...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp GCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTTAACCACCCTCCTCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: ALGKGQREGPTVFLNHPPLVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...AGGAGGGTGGTTAAGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp CTGGAATGCAAGTGCCCTGGGCAAGGGACAGCGAGAGGGCCCCACTGTATTTCTACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: LECKCPGQGTARGPHCISTGAKG*GRDLVS
Trigger: AGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT...AGAAATACAGTGGGGCCCTCTCGCTGTCCCTTGCCCAGGGCACTTGCATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: GLGRDLVSSSLSVLLLRGTGAKG*GRDLVS
Trigger: AGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT...CCCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp GGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCCGGGGGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGT +
Preference number: 5 (lower is better)
Translates to: GVGKGSGIFVIVGTASPGGAVPT*SRSECG
Trigger: ACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC...CCCCGGAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GGATGGTGCTGTCCCGACTTTGTCCAGATCAGAATGCGGTGCCTATGCCCAGATGGCTGGTGCGGTGTTTaGATTTCCATGGTGGGGCCT +
Preference number: 5 (lower is better)
Translates to: GWCCPDFVQIRMRCLCPDGWCGV*ISMVGP
Trigger: AGGCCCCACCATGGAAATCAAAACACCGCACCAGCC...ATCTGGGCATAGGCACCGCATTCTGATCTGGACAAAGTCGGGACAGCACCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTTGGAGTAGGGTGGGCTaGGGAGGCAGTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: DRCKGVGKGSGIFVIVGTWSRVG*GGSEEE
Trigger: TTCCTCCTCACTGCCTCCCAAGCCCACCCTACTCCA...AGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
CDS-3UTR CAA 90 bp CAAGATTCAGGGCGTCGGCTGGCGATGTCAGAATGTCCATTCTGCTGGCTGGTGCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: QDSGRRLAMSECPFCWLVLVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...CACCAGCCAGCAGAATGGACATTCTGACATCGCCAGCCGACGCCCTGAATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp TGGGACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTCTGGTATCTTCGTCATaGTCGGTACTGCTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: WDRCKGVGKGSGIFVIVGLVSSS*SVLLLR
Trigger: CCGGAGAAGCAGTACCGACAATGACGAAGATACCAG...ACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS-3UTR CAA 90 bp GACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGT +
Preference number: 5 (lower is better)
Translates to: DRCKGVGKGSGIFVIVGTGAVPT*SRSECG
Trigger: ACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC...AGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp ACCGGTGCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGGGTGCTGTCCCGACTTaGTCCAGATCAGAATGCGGT +
Preference number: 5 (lower is better)
Translates to: TGAKGLGRDLVSSSLSVLGAVPT*SRSECG
Trigger: ACCGCATTCTGATCTGGACAAAGTCGGGACAGCACC...CAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
CDS-3UTR CAA 90 bp GCAAAGGGGTTGGGAAGGGATCTGGTATCTTCGTCATTGTCGGTACTGCTTCTCACCGGTGCAAAGGGGTaGGGAAGGGATCTGGTATCT +
Preference number: 5 (lower is better)
Translates to: AKGLGRDLVSSSLSVLLLTGAKG*GRDLVS
Trigger: AGATACCAGATCCCTTCCCAACCCCTTTGCACCGGT...GAGAAGCAGTACCGACAATGACGAAGATACCAGATCCCTTCCCAACCCCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS CCA 90 bp CAGGGAGTACCTGAACACCTCACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAATGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: QGVPEHLTSRNGLCP*RISKSESYPVNAAF
Trigger: GAATGCTGCATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGAGGTGTTCAGGTACTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649451.1
CDS CCA 90 bp TTCTGCAGGGAGTACCTGAACACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAATGCAGCATTC +
Preference number: 5 (lower is better)
Translates to: FCREYLNTSRNGLCP*RISKSESYPVNAAF
Trigger: GAATGCTGCATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGTTCAGGTACTCCCTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649309.1
CDS GCA 72 bp AGATCCGCTGGTCTCGGAGTCCGCTGTTGGGCGCACTaGCGCAGCCGCGGTGGCCGCGCCTTAAGTACCCGC +
Preference number: 6 (lower is better)
Translates to: RSAGLGVRCWAH*RSRGGRALSTR
Trigger: GCGGGTACTTAAGGCGCGGCCACCGCGGCTGCGGCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS GCA 72 bp CAGTTGGGGGCTCGCTGCCTGCGCTCCCCCAACACCTaGCGCCCGGTCCGCGACACCGTGTATGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: QLGARCLRSPNT*RPVRDTVYASF
Trigger: GAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGGGAGCGCAGGCAGCGAGCCCCCAACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS CCA 72 bp GGTTTGCCGAGATCCGCTGGTCTCGGAGTCCGCTGTTaGGCGCACTGCCGCAGCCGCGGTGGCCGCGCCTTA +
Preference number: 6 (lower is better)
Translates to: GLPRSAGLGVRC*AHCRSRGGRAL
Trigger: TAAGGCGCGGCCACCGCGGCTGCGGCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS GCA 72 bp CCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCTGCAG +
Preference number: 6 (lower is better)
Translates to: PQHLPPGPRHRV*QLLQGVPEHLQ
Trigger: CTGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000346199.3
CDS GCA 72 bp CCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCTGCGA +
Preference number: 6 (lower is better)
Translates to: PQHLPPGPRHRV*QLLQGVPEHLR
Trigger: TCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS CCA 72 bp GTGGGTGGTCGAGAAAGAGGGTTTGCCGAGATCCGCTaGTCTCGGAGTCCGCTGTTGGGCGCACTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: VGGRERGFAEIR*SRSPLLGALPQ
Trigger: CTGCGGCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000647955.1
CDS GCA 72 bp GCCGATGATGAGCAGTTCAGCCGAGGCCGCCGCCACTaGCGCCATGGTTCCAAGAATGGTAGGTGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: ADDEQFSRGRRH*RHGSKNGRWVV
Trigger: GACCACCCACCTACCATTCTTGGAACCATGGCGGCAGTGGCGGCGGCCTCGGCTGAACTGCTCATCATCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS GCA 72 bp CCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCCAGTA +
Preference number: 6 (lower is better)
Translates to: PQHLPPGPRHRV*QLLQGVPEHPV
Trigger: TACTGGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647955.1
CDS GCA 72 bp CCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACCTCACT +
Preference number: 6 (lower is better)
Translates to: PQHLPPGPRHRV*QLLQGVPEHLT
Trigger: AGTGAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649451.1
CDS GCA 72 bp CCCCAACACCTGCCGCCCGGTCCGCGACACCGTGTATaGCAGCTTCTGCAGGGAGTACCTGAACACTTCTCG +
Preference number: 6 (lower is better)
Translates to: PQHLPPGPRHRV*QLLQGVPEHFS
Trigger: CGAGAAGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649309.1
CDS CAA 90 bp CGCCATGGTTCCAAGAATGGTAGGTGGGTGGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTCGGAGTCCGCTGTTGGGCGCACTGC +
Preference number: 6 (lower is better)
Translates to: RHGSKNGRWVVEKEG*PRSAGLGVRCWAHC
Trigger: GCAGTGCGCCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCACCTACCATTCTTGGAACCATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346199.3
ENST00000647955.1
CDS CCA 72 bp CGCCGCCACTGCCGCCATGGTTCCAAGAATGGTAGGTaGGTGGTCGAGAAAGAGGGTTTGCCGAGATCCGCT +
Preference number: 6 (lower is better)
Translates to: RRHCRHGSKNGR*VVEKEGLPRSA
Trigger: AGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCACCTACCATTCTTGGAACCATGGCGGCAGTGGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649309.1
ENST00000649451.1
ENST00000649697.1
CDS GCA 72 bp CCAAGAATGGTAGGTGGGTGGTCGAGAAAGAGGGTTTaGCGAGATCCGCTGGTCTCGGAGTCCGCTGTTGGG +
Preference number: 6 (lower is better)
Translates to: PRMVGGWSRKRV*RDPLVSESAVG
Trigger: CCCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCACCTACCATTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
ENST00000649697.1
CDS GCA 72 bp GTGTATGCCAGCTTCTGCAGGGAGTACCTGAACACCTaGGACGAGAAACCCAGGACCCACCCTGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: VYASFCREYLNT*DEKPRTHPAAA
Trigger: TGCTGCTGCAGGGTGGGTCCTGGGTTTCTCGTCGCAGGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649697.1
CDS CAA 72 bp TCCAAGAATGGTAGGTGGGTGGTCGAGAAAGAGGGTTaGCCGAGATCCGCTGGTCTCGGAGTCCGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: SKNGRWVVEKEG*PRSAGLGVRCW
Trigger: CCAACAGCGGACTCCGAGACCAGCGGATCTCGGCAAACCCTCTTTCTCGACCACCCACCTACCATTCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346199.3
ENST00000647955.1
ENST00000649451.1
ENST00000649697.1
CDS CCA 72 bp CCTGAACACCTCACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAAT +
Preference number: 6 (lower is better)
Translates to: PEHLTSRNGLCP*RISKSESYPVN
Trigger: ATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGAGGTGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649451.1
CDS CCA 72 bp GAGTACCTGAACACTTCTCGCAATGGGCTGTGTCCCTaGAGGATTTCGAAAAGCGAATCCTACCCAGTAAAT +
Preference number: 6 (lower is better)
Translates to: EYLNTSRNGLCP*RISKSESYPVN
Trigger: ATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCGAGAAGTGTTCAGGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649309.1