RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NMT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136448

Ensembl transcript IDs: ENST00000258960.7, ENST00000543908.5, ENST00000585561.5, ENST00000587014.2, ENST00000587670.2, ENST00000588455.5, ENST00000590114.6, ENST00000590310.2, ENST00000591931.2, ENST00000592654.3, ENST00000592782.5, ENST00000676753.1, ENST00000676828.1, ENST00000677949.1, ENST00000678332.1, ENST00000678576.1, ENST00000678606.1, ENST00000678938.1

Found 2846 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTaGGCCCGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCC +
Preference number: 1 (lower is better)
Translates to: PKDSPTPPIPEVPSG*ARVHRLCCGSRLTP
Trigger: GGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 90 bp ACTCGAGGTAACAAGGACCCAGACTGCGGCTGTCTCCTCAACCCATaGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGC +
Preference number: 1 (lower is better)
Translates to: TRGNKDPDCGCLLNP*PGFCWRHGHPGPGS
Trigger: GCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 90 bp GCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGCCAGAGGTaGGATGCTAAGGGCGGAGCTGTGACTCACAGTGGCACATGCTCC +
Preference number: 1 (lower is better)
Translates to: APAGTKCPPYQIRQR*DAKGGAVTHSGTCS
Trigger: GGAGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR GCA 90 bp AGCAGACACCAAGAGCCCTCCAGACAAGGCAGGGACTTGCCAATCTaGCATCCCTACAACCCTCCCGCCCTCTCCATGCTCCCCATCTGG +
Preference number: 1 (lower is better)
Translates to: SRHQEPSRQGRDLPI*HPYNPPALSMLPIW
Trigger: CCAGATGGGGAGCATGGAGAGGGCGGGAGGGTTGTAGGGATGGCAGATTGGCAAGTCCCTGCCTTGTCTGGAGGGCTCTTGGTGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CCA 90 bp CTTCTGCGGACCGTCCATTGCTTTGTCTCAGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCTGCCCAGGGTCAGCCCCAGCCAAGA +
Preference number: 1 (lower is better)
Translates to: LLRTVHCFVSECRQV*PCRKVPAQGQPQPR
Trigger: TCTTGGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp GCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGA +
Preference number: 1 (lower is better)
Translates to: AGSSSSLQSGQHSHG*HGPHPKHTMSSGFG
Trigger: TCCAAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp CTCAGGAGAGGAAACCTCCTCAGAGTTCCCCCAGCCCTACCCTCCTaGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTCACGTGGG +
Preference number: 1 (lower is better)
Translates to: LRRGNLLRVPPALPS*QTVGNSTSTVPSRG
Trigger: CCCACGTGAGGGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGAACTCTGAGGAGGTTTCCTCTCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR TCA 90 bp AGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACCACACTGCAGGGCTCCTGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: RTVSVKASGSFLCLV*DSHGATTLQGSCGE
Trigger: CTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTG +
Preference number: 1 (lower is better)
Translates to: EALCNCCLWGCKASP*LSDSSHLWNAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp GAAACCTCCTCAGAGTTCCCCCAGCCCTACCCTCCTGGCAAACCGTaGGCAACTCAACTTCCACGGTTCCCTCACGTGGGAAGGCCTCAT +
Preference number: 1 (lower is better)
Translates to: ETSSEFPQPYPPGKP*ATQLPRFPHVGRPH
Trigger: ATGAGGCCTTCCCACGTGAGGGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGAACTCTGAGGAGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR TCA 90 bp GCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCCTTTGCTTGGTTTGAGACAGCCATG +
Preference number: 1 (lower is better)
Translates to: AQGGLPTAVARGRLA*RPQGPSFAWFETAM
Trigger: CATGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CGCCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTaGCTCACAGTGGCACATGCTCCTCAACTACAGTGCAGACACCCG +
Preference number: 1 (lower is better)
Translates to: RLTRYARGGMLRAEL*LTVAHAPQLQCRHP
Trigger: CGGGTGTCTGCACTGTAGTTGAGGAGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR TCA 90 bp GTTCTTTTAGCACACCACGATCGCCCAGGTCCAAAGCATCCCAGGTaGAGCCCTGGGGCAGGGTGTAGGGCTCCTGGCGGATATTGTCCT +
Preference number: 1 (lower is better)
Translates to: VLLAHHDRPGPKHPR*SPGAGCRAPGGYCP
Trigger: AGGACAATATCCGCCAGGAGCCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGTGGTGTGCTAAAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CCA 90 bp AGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTC +
Preference number: 1 (lower is better)
Translates to: RHVWGNEPYTGLDPE*RPPTQLSPYTQTGV
Trigger: GACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTTTGCCAGGAGATCTGTTTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: PQHKAESEEPATWFQ*GRCWGLCQEICFFQ
Trigger: CTGGAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp CCCTCTGCCATCCTCACACCAGTTGCTGAGAGGGGAACGCTGACCTaGTGGTCTGGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACT +
Preference number: 1 (lower is better)
Translates to: PSAILTPVAERGTLT*WSGQQREGIFKGST
Trigger: AGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCCAGACCAGCAGGTCAGCGTTCCCCTCTCAGCAACTGGTGTGAGGATGGCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 90 bp TCTGACAAACCACACCAAAACCCACAGCCTGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTCGGTGAGTGGCACAGGGCTGAGCCT +
Preference number: 1 (lower is better)
Translates to: SDKPHQNPQPATSPC*PVESGFGEWHRAEP
Trigger: AGGCTCAGCCCTGTGCCACTCACCGAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGGCTGTGGGTTTTGGTGTGGTTTGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp CTTCCAGAACAGCCACTGGGGCCTCACCGTTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCA +
Preference number: 1 (lower is better)
Translates to: LPEQPLGPHRFHSMT*VNRNRAHSRDPHSP
Trigger: TGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp CAGAGGTGGGATGCTAAGGGCGGAGCTGTGACTCACAGTGGCACATaGTCCTCAACTACAGTGCAGACACCCGCATTTTTGGGGCCTTAC +
Preference number: 1 (lower is better)
Translates to: QRWDAKGGAVTHSGT*SSTTVQTPAFLGPY
Trigger: GTAAGGCCCCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CCA 90 bp AATCAGATGAGCAGCAAGCAGCCCACAAGCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCG +
Preference number: 1 (lower is better)
Translates to: NQMSSKQPTSQTLHT*AEFSPQHKAESEEP
Trigger: CGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTGGCTTGTGGGCTGCTTGCTGCTCATCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp CTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTCACGTaGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTC +
Preference number: 1 (lower is better)
Translates to: LLANRGQLNFHGSLT*EGLIGDDLRATVWL
Trigger: GAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR TCA 90 bp TTTGATATCCTCAAAGGTCTGGACAGGGTGAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCC +
Preference number: 1 (lower is better)
Translates to: FDILKGLDRVSHSGA*GTVQLLSVGLQSKP
Trigger: GGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCTCACCCTGTCCAGACCTTTGAGGATATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTGGAGCAACCCTCTTGGAACGCAGCT +
Preference number: 1 (lower is better)
Translates to: QCKLLGRCPPGEPAW*SLGSELEQPSWNAA
Trigger: AGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR CCA 90 bp GCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCACAGGCCAGGGGCTGGTGGCTGAAG +
Preference number: 1 (lower is better)
Translates to: ATTCRLYLGKGHNKK*LMGWKAQARGWWLK
Trigger: CTTCAGCCACCAGCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp TCCGGAGTGGAGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTA +
Preference number: 1 (lower is better)
Translates to: SGVEASYSALSLHTD*SPWSNAESIQRQEV
Trigger: TACCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCTCCACTCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp TGTTTCTTCCAGAACAGCCACTGGGGCCTCACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACAGAGCTCACTCCAGAGATCCGCACA +
Preference number: 1 (lower is better)
Translates to: CFFQNSHWGLTVSIP*PGSTETELTPEIRT
Trigger: TGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp TCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTTCTGTATTTCCTGGATCCTCTCTGC +
Preference number: 1 (lower is better)
Translates to: SLASLLHGFGRSLTH*EQLNGLLYFLDPLC
Trigger: GCAGAGAGGATCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR GCA 90 bp GAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTaGGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACAT +
Preference number: 1 (lower is better)
Translates to: EGIFKGSTRGNKDPD*GCLLNPWPGFCWRH
Trigger: ATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 90 bp ACAGTGGCACATGCTCCTCAACTACAGTGCAGACACCCGCATTTTTaGGGCCTTACAGGAAGACAGTTTTACCTGCAGGTGCCAACGGGC +
Preference number: 1 (lower is better)
Translates to: TVAHAPQLQCRHPHF*GLTGRQFYLQVPTG
Trigger: GCCCGTTGGCACCTGCAGGTAAAACTGTCTTCCTGTAAGGCCCCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGCATGTGCCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR TCA 90 bp CTCTTTTTCCCCATGATAAGCCAATGTCTCCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTGTCTGCCACTGTCCTCGGGTCCTCA +
Preference number: 1 (lower is better)
Translates to: LFFPMISQCLLWRKP*TVPTRLSATVLGSS
Trigger: TGAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACATTGGCTTATCATGGGGAAAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACCGTCCATTGCTTTGTCTCAGAATGC +
Preference number: 1 (lower is better)
Translates to: PTGSRPRGWKKGLNQ*GLLLRTVHCFVSEC
Trigger: GCATTCTGAGACAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp AGCGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATaGTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTA +
Preference number: 1 (lower is better)
Translates to: SGEVTAARKPAHHTS*YLLPTTCFSLEQKL
Trigger: TAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp CTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCC +
Preference number: 1 (lower is better)
Translates to: LHAVVQGLWALRLVK*WSSLGKEFRTTGTP
Trigger: GGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp GTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGG +
Preference number: 1 (lower is better)
Translates to: VSVSWSQGANVSHDC*GLQFAAQEQWEKGG
Trigger: CCCTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CATGCTTGGGAGTCAGTGTCTGACCTGCTGTGTCTTTTAGGGTACTaGGAGCAGTTTCATCACCTAGGTCTAGGGCAGCAGAGGACAGCA +
Preference number: 1 (lower is better)
Translates to: HAWESVSDLLCLLGY*EQFHHLGLGQQRTA
Trigger: TGCTGTCCTCTGCTGCCCTAGACCTAGGTGATGAAACTGCTCTCAGTACCCTAAAAGACACAGCAGGTCAGACACTGACTCCCAAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR GCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTCATTCTGAGGAATGATCTGGATTCA +
Preference number: 1 (lower is better)
Translates to: MSPLEETMNCANASV*HCPRVLILRNDLDS
Trigger: TGAATCCAGATCATTCCTCAGAATGAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp GAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAG +
Preference number: 1 (lower is better)
Translates to: ECSSMQLSKAFGPLG*LNAGRLWGKNSGPQ
Trigger: CTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp CCTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: PPSPRVQLHAVVQGL*ALRLVKCWSSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGA +
Preference number: 1 (lower is better)
Translates to: PGSTISQPNFARSLG*TPLQNAYIDSHVTR
Trigger: TCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp ACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACTCCAGAATaGCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTG +
Preference number: 1 (lower is better)
Translates to: TAQFCPVTWLNTTPE*LHRQPCDQRLDYVL
Trigger: CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp TTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGA +
Preference number: 1 (lower is better)
Translates to: LVSVSWSQGANVSHD*WGLQFAAQEQWEKG
Trigger: TCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp CAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGAC +
Preference number: 1 (lower is better)
Translates to: QAWKYNFTAQFCPVT*LNTTPECLHRQPCD
Trigger: GTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp AAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGG +
Preference number: 1 (lower is better)
Translates to: KVKLLQVPGEELVHY*NVLCFHWSQPSCLG
Trigger: CCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR TCA 90 bp ACTGTGCCAACGCGTCTGTCTGCCACTGTCCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAGCTTTTCATTAAAGACCAAACATCC +
Preference number: 1 (lower is better)
Translates to: TVPTRLSATVLGSSF*GMIWIQLFIKDQTS
Trigger: GGATGTTTGGTCTTTAATGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp AGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTaGTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGGAAGTACAA +
Preference number: 1 (lower is better)
Translates to: RKPAHHTSCYLLPTT*FSLEQKLHPSLEVQ
Trigger: TTGTACTTCCAGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACA +
Preference number: 1 (lower is better)
Translates to: DLPLITSCYHLQAVS*KGAQQEMANGLEGT
Trigger: TGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp CAACGCGTCTGTCTGCCACTGTCCTCGGGTCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCATTAAAGACCAAACATCCTTGTACA +
Preference number: 1 (lower is better)
Translates to: QRVCLPLSSGPHSEE*SGFSFSLKTKHPCT
Trigger: TGTACAAGGATGTTTGGTCTTTAATGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGGACCCGAGGACAGTGGCAGACAGACGCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 90 bp AAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAA +
Preference number: 1 (lower is better)
Translates to: KPLLLPSPDLPLITS*YHLQAVSWKGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 90 bp AATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTaGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCA +
Preference number: 1 (lower is better)
Translates to: NAYIDSHVTRGLITF*ETGSTDNHHYHKNP
Trigger: TGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 90 bp ATTTATGCTTTACTTAGGCTAAAATTACAGAGAATAGGTGTTCTCTaGGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACT +
Preference number: 1 (lower is better)
Translates to: IYALLRLKLQRIGVL*AFQQMAEKLVQAQT
Trigger: AGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTTAGCCTAAGTAAAGCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
3UTR-3UTR CCA 90 bp GGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTCGAGACATGGACACCCTaGGCCGGGCAGCCTGGACTC +
Preference number: 2 (lower is better)
Translates to: GSTACAVGADSHPAGPTLETWTP*AGQPGL
Trigger: GAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTC...GAGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR GCA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GGGCAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 2 (lower is better)
Translates to: GQGVGLLADIVLVRLHGAPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...GGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGCCAGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: APHLAPAGTKCPPYQIRQTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CTGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR GCA 90 bp GGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTCCCATGGCCCGGTTTCTaGTGGAGACATGGACACCCT +
Preference number: 2 (lower is better)
Translates to: GSTACAVGADSHPAGPTLPWPGF*WRHGHP
Trigger: AGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGG...GAGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR CCA 90 bp ATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGCTCGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 2 (lower is better)
Translates to: IAQVQSIPGEALGQGVGLGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...GAGCCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 2 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGAGGGGAACGCTGACCTaGTGGTCTGGCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARRGTLT*WSGQQR
Trigger: CCTCTGCTGGCCAGACCAGCAGGTCAGCGTTCCCCT...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CCCACACTCAACCTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAAAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: PTLNLHTRVHTSIRPPRERHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...TTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAGGTTGAGTGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR TCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGCCAGAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 2 (lower is better)
Translates to: APHLAPAGTKCPPYQIRQKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...CTGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR GCA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 2 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATCTCCCGCCCTCTCCATaGTCCCCATCTGGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDLPPSP*SPSGSC
Trigger: GCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAG...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 2 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 2 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCACGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: LASWLRLHSCMSGEVTAARGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 2 (lower is better)
Translates to: GSWRILSLSGSTGPWVFTKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...GGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 2 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGCTTCGTGCTACTGTGTaGCTCTGTCCCCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARLRATV*LCPLCH
Trigger: ATGGCAGAGGGGACAGAGCCACACAGTAGCACGAAG...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CAA 90 bp GGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGGAAAAGGGAGGGCCCTGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: GVKEQTSVTIAGACN*QRRNNGKREGPAGP
Trigger: GGGGCCTGCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 2 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCTTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 2 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678332.1
3UTR-3UTR GCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSERLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 2 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCCACACTCAACCTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAATGGCCCGGTTTCTGCTaGAGACATGGACACCCTGGG +
Preference number: 2 (lower is better)
Translates to: PTLNLHTRVHTSIRPPREWPGFC*RHGHPG
Trigger: CCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCA...TTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAGGTTGAGTGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 2 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATCTAAGGGCGGAGCTGTaGCTCACAGTGGCACATGCT +
Preference number: 2 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDLRAEL*LTVAHA
Trigger: AGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAG...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR TCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGACAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 2 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 2 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: RTGATLLERSFLWTHRKLGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 2 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AACCCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 2 (lower is better)
Translates to: NPPALSMLPIWLLQAPSADMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR CCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 2 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 2 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 2 (lower is better)
Translates to: LHHESVDDILLGVEPVLHGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...GTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCCACACTCAACCTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAACCTCCTGGCAAACCGTaGGCAACTCAACTTCCACGG +
Preference number: 2 (lower is better)
Translates to: PTLNLHTRVHTSIRPPREPPGKP*ATQLPR
Trigger: CCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGG...TTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAGGTTGAGTGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CAA 90 bp GTGGGCAACTCAACTTCCACGGTTCCCTCACGTGGGAAGGCCTCATaGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTCCCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: VGNSTSTVPSRGKAS*EMIFVLLCGSVPSA
Trigger: GGCAGAGGGGACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAAGTTGAGTTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR TCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: SSTASVGVVGLQARLHFAASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 2 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: LVASLASLLHGFGRSLTHVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTCCTCACACCAGTTGCTaGGAGGGGAACGCTGACCTG +
Preference number: 2 (lower is better)
Translates to: PSRGKASLEMIFVLLCGSPHTSC*EGNADL
Trigger: CAGGTCAGCGTTCCCCTCTCAGCAACTGGTGTGAGG...AGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR GCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: LASWLRLHSCMSGEVTAATIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 2 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 2 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 2 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAACAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 2 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCCACACTCAACCTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAATGTCTCCTCAACCCATaGCCCGGTTTCTGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: PTLNLHTRVHTSIRPPRECLLNP*PGFCWR
Trigger: TCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACA...TTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAGGTTGAGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR TCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 2 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 2 (lower is better)
Translates to: ASSEIGMCGETSPIQASIARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: LASWLRLHSCMSGEVTAASPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 2 (lower is better)
Translates to: SPCSPSGSCRHQVPALPDNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...ATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPANQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CTCACAGTGGCACATGCTCCTCAACTACAGTGCAGACACCCGCATTTTTGGGGCGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 2 (lower is better)
Translates to: LTVAHAPQLQCRHPHFWGGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...GCCCCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGCATGTGCCACTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR TCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 2 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGACCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 2 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 2 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAGTGCCCGCCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTGGAAGACAGTTTTACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: KCPPYQIRQRWDAKGGAVEDSFT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTAAAACTGTCTTC...CACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR GCA 90 bp AGACAAGGCAGGGACTTGCCAATCTGCCATCCCTACAACCCTCCCGCCCTCTCCGCTCCTCAACTACAGTaGAGACACCCGCATTTTTGG +
Preference number: 2 (lower is better)
Translates to: RQGRDLPICHPYNPPALSAPQLQ*RHPHFW
Trigger: CCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGC...GGAGAGGGCGGGAGGGTTGTAGGGATGGCAGATTGGCAAGTCCCTGCCTTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR GCA 90 bp TCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACACTCACAGTGGCACATaGTCCTCAACTACAGTGCAG +
Preference number: 2 (lower is better)
Translates to: SMLPIWLLQAPSARLTRYTHSGT*SSTTVQ
Trigger: CTGCACTGTAGTTGAGGAGCATGTGCCACTGTGAGT...GTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR GCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 2 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR GCA 90 bp GTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCGCTAAGAAAGTGTCATaGCAGAAGAGGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VHTSIRPPRENWPTLQLTAKKVS*QKRAAA
Trigger: AGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGC...GGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR CCA 90 bp TCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SLSGSTGPWVFTTSPSLGWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...CCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 2 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 2 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPACLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 2 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCATTTCTGCTGGAGACATaGACACCCTGGGCCGGGCAG +
Preference number: 2 (lower is better)
Translates to: GQQREGIFKGSTRGNKDPFLLET*TPWAGQ
Trigger: CTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAA...TGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR TCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 2 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEAASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 2 (lower is better)
Translates to: ASSEIGMCGETSPIQASISHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 2 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 2 (lower is better)
Translates to: TSPFAFSTTKVSMIFSWGGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGGT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTTGAGCCCAGGAGGTTaGGGCTGCGGTCAGCCATGT +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINLSPGG*GCGQPC
Trigger: ACATGGCTGACCGCAGCCTCAACCTCCTGGGCTCAA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR-3UTR GCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPASINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: SSTASVGVVGLQARLHFARASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LASWLRLHSCMSGEVTAARCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPASRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCATTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: LASWLRLHSCMSGEVTAAFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 2 (lower is better)
Translates to: VTIAGACNLQRRNNGKREAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 2 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GACAGTTTTACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: DSFTCRCQRALVVPPRQCLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...ACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTAAAACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR CCA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 2 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CAA 90 bp AAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGGTCTGGCCCTGCAGGAAAGTCCCTG +
Preference number: 2 (lower is better)
Translates to: KDSINEVCFCGPSIA*SQNAGRSGPAGKSL
Trigger: CAGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSELSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 2 (lower is better)
Translates to: VTIAGACNLQRRNNGKREPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTATTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp GTGTACAGTTCTTTTAGCACACCACGATCGCCCAGGTCCAAAGCATCCCAGGTGAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: VYSSFSTPRSPRSKASQVRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...CACCTGGGATGCTTTGGACCTGGGCGATCGTGGTGTGCTAAAAGAACTGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 2 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEAGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 2 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 2 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAATGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWECFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGATCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 2 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCATGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 2 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 2 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEATDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCACTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 2 (lower is better)
Translates to: SSTASVGVVGLQARLHFALVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 2 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 2 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 2 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 2 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 2 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGTGTCTTTTAGGGTACTaGGAGCAGTTTCATCACCTA +
Preference number: 2 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLCLLGY*EQFHHL
Trigger: TAGGTGATGAAACTGCTCTCAGTACCCTAAAAGACA...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: LHHESVDDILLGVEPVLHRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...GTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 2 (lower is better)
Translates to: LHHESVDDILLGVEPVLHPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...GTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 2 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 2 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 2 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 2 (lower is better)
Translates to: VTIAGACNLQRRNNGKRENVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 2 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCACTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEALLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 2 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGATTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 2 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 2 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 2 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 2 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 2 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 2 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMAAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 2 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTATCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 2 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR CAA 90 bp GAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAGGCAGGTCTGGCCCTGCAGGAAAGT +
Preference number: 2 (lower is better)
Translates to: EERTQSMRSASADRP*LCLRMQAGLALQES
Trigger: ACTTTCCTGCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 90 bp CAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACAGGGTG +
Preference number: 2 (lower is better)
Translates to: QGAFPSSRFPQGRKD*GTLSFDILKGLDRV
Trigger: CACCCTGTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: HPSLEVQFHSPILPGHLALWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 2 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEAGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTATGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 2 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 2 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR TCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGCTGATCCTGGGCTaGATCTGTCTCACTGCCTTT +
Preference number: 2 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGRLILG*ICLTAF
Trigger: AAAGGCAGTGAGACAGATTCAGCCCAGGATCAGCCT...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678332.1
3UTR-3UTR GCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAACAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEAGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 2 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGATTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 2 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAACTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAAAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 2 (lower is better)
Translates to: SVCVLHHESVDDILLGVEKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 2 (lower is better)
Translates to: SALSLHTDWSPWSNAESIANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAAGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: SVCVLHHESVDDILLGVEGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 2 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 2 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMAECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCACATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: SSTASVGVVGLQARLHFAHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTATTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 2 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 2 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 2 (lower is better)
Translates to: EALCNCCLWGCKASPCLSKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 2 (lower is better)
Translates to: CGETSPIQASIRSGGLLLKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSERNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSENAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 2 (lower is better)
Translates to: SELEQPSWNAASCGHTGSLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: HESVDDILLGVEPVLHLLVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 2 (lower is better)
Translates to: PKHTMSSGFGNSAELASDCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 2 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CAA 90 bp TTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGG +
Preference number: 2 (lower is better)
Translates to: FGLSFLESRSKRQSR*LGPAICSAGTMGKG
Trigger: CCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTaGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACA +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALR*VKCWSSLGKEFRTT
Trigger: TGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: SALSLHTDWSPWSNAESILGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTACTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 2 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQEASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 2 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: ASSEIGMCGETSPIQASIGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR TCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR GCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCATCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEASINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 2 (lower is better)
Translates to: EIGMCGETSPIQASIRSGPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 2 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 2 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTG +
Preference number: 2 (lower is better)
Translates to: HDGRKVKLLQVPGEELVHFLDPL*WQRVHL
Trigger: CAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...GTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR-3UTR CCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: ASSEIGMCGETSPIQASISRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 2 (lower is better)
Translates to: LASWLRLHSCMSGEVTAAKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: ASSEIGMCGETSPIQASIFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 2 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 2 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 2 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCAGCAGAGGACAGCACTaGGATCCAACTCTTCCATCT +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSSRGQH*DPTLPS
Trigger: AGATGGAAGAGTTGGATCCCAGTGCTGTCCTCTGCT...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR CAA 90 bp ACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTAC +
Preference number: 2 (lower is better)
Translates to: TPLQNAYIDSHVTRG*ITFWETGSTDNHHY
Trigger: GTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 90 bp TTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAAGGTCTGGACAGGGTGAGCCACTCT +
Preference number: 2 (lower is better)
Translates to: FPSSRFPQGRKDLGT*SFDILKGLDRVSHS
Trigger: AGAGTGGCTCACCCTGTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 2 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 2 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR TCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 2 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR GCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAAAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: SVCVLHHESVDDILLGVENEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 2 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 2 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCACTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: STETELTPEIRTAQISEALLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 2 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 2 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 2 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAATGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: KRGLGVNVVERISSFETLECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 2 (lower is better)
Translates to: ASSEIGMCGETSPIQASILQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 2 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 2 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 2 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 2 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 2 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CAA 90 bp CACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTaGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGAT +
Preference number: 2 (lower is better)
Translates to: HLWNAVRILLRTAAS*VSVSWSQGANVSHD
Trigger: ATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMALSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 2 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 2 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 2 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 2 (lower is better)
Translates to: HFLLPLAGCILERGTTRNAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAACTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQELRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 2 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 2 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678332.1
3UTR-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 2 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 2 (lower is better)
Translates to: VGRMTSYREQAKGMEERTDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 2 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CAA 90 bp GAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGA +
Preference number: 2 (lower is better)
Translates to: ETTSVAKSRSASNHF*LPLAGCILERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: PKHTMSSGFGNSAELASDLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAACTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 2 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQELGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 2 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 2 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMALFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 2 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 2 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 2 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 2 (lower is better)
Translates to: PHPKHTMSSGFGNSAELASFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 2 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 2 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: FLESRSKRQSRLLGPAICRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 2 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 2 (lower is better)
Translates to: ITSKPGSTISQPNFARSLLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: KSSGNLSPLRLRSPPRKCSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...ACACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 2 (lower is better)
Translates to: PKHTMSSGFGNSAELASDVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 2 (lower is better)
Translates to: KRGLGVNVVERISSFETLNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR TCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGAACGTCAATCCAAGTTaGTCCTATACATTCACCTCA +
Preference number: 2 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRNVNPS*SYTFTS
Trigger: TGAGGTGAATGTATAGGATCAACTTGGATTGACGTT...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR-3UTR TCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTCCAACTCTTCCATCTTaGAGTAATACCAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPPTLPS*SNTSGE
Trigger: TTCTCCACTGGTATTACTTCAAGATGGAAGAGTTGG...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR-3UTR GCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAATCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 2 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 2 (lower is better)
Translates to: ITSKPGSTISQPNFARSLGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 2 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR GCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 2 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 2 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 2 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 2 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 2 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 2 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 2 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678332.1
3UTR-3UTR TCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAACATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQEHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 2 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 2 (lower is better)
Translates to: ITSKPGSTISQPNFARSLLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 2 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 2 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR GCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 2 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 2 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR TCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 2 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: PKHTMSSGFGNSAELASDNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: LITFWETGSTDNHHYHKNSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 2 (lower is better)
Translates to: ITSKPGSTISQPNFARSLIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 2 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp GAAGTTCCGAGTGGCTGGGCCCGGGTCCACCGCCTGTaGTGTGGGAGCAGACTCACACCCAGCCGGCCCCAC +
Preference number: 3 (lower is better)
Translates to: EVPSGWARVHRL*CGSRLTPSRPH
Trigger: GTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCGGGCCCAGCCACTCGGAACTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR GCA 72 bp TGGGGGCCAGGCCCAGGGAGGCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: WGPGPGRPSNSS*SRTVSVKASGS
Trigger: GGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp GACTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTaGTGGAGACATGGACACCCTGGGCCGGGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: DCGCLLNPWPGF*WRHGHPGPGSL
Trigger: CAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 72 bp TGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTaGAGACATGGACACCCTGGGCCGGGCAGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: CGCLLNPWPGFC*RHGHPGPGSLD
Trigger: GTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 72 bp TCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTaGGCCCGGGTCCACCGCCTGTGCTGTGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: SPTPPIPEVPSG*ARVHRLCCGSR
Trigger: TCTGCTCCCACAGCACAGGCGGTGGACCCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR GCA 72 bp ACCAATTTCCGACTTGAGACCACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: TNFRLETTRTPQ*HWGSQPGGRRA
Trigger: GGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CCA 72 bp AAGGTGGGCCAGGCCATCAGAAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGGGACACTCCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: KVGQAIRRLPHR*VGTDGRDTPAP
Trigger: GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTGGCCCACCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp TGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGC +
Preference number: 3 (lower is better)
Translates to: WRILSLSGSTGP*VFTTSPSLGTG
Trigger: GCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 3 (lower is better)
Translates to: EALCNCCLWGCKASPCLSRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 3 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 3 (lower is better)
Translates to: GSWRILSLSGSTGPWVFTGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...GGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR GCA 72 bp CTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTaGCCGCCTTACCAGATACGCCAGAGGTGGGATGCT +
Preference number: 3 (lower is better)
Translates to: LHAPHLAPAGTK*PPYQIRQRWDA
Trigger: AGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CCA 72 bp AGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAGCATACGATGTCTTCT +
Preference number: 3 (lower is better)
Translates to: SSSLQSGQHSHG*HGPHPKHTMSS
Trigger: AGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp GGCACCAAGTGCCCGCCTTACCAGATACGCCAGAGGTaGGATGCTAAGGGCGGAGCTGTGACTCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: GTKCPPYQIRQR*DAKGGAVTHSG
Trigger: GCCACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTTGGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR CAA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 3 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: EALCNCCLWGCKASPCLSCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp CAAGAGCCCTCCAGACAAGGCAGGGACTTGCCAATCTaGCATCCCTACAACCCTCCCGCCCTCTCCATGCTC +
Preference number: 3 (lower is better)
Translates to: QEPSRQGRDLPI*HPYNPPALSML
Trigger: GAGCATGGAGAGGGCGGGAGGGTTGTAGGGATGGCAGATTGGCAAGTCCCTGCCTTGTCTGGAGGGCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CCA 72 bp ACTCTGGGGCTTGAGGCACTGTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCCTGCCTCTCCGACTCC +
Preference number: 3 (lower is better)
Translates to: TLGLEALCNCCL*GCKASPCLSDS
Trigger: GGAGTCGGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp CTCAGGGTCCTTCCTTTGCTTGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGGCTCCTGTGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: LRVLPLLGLRQP*RYHTAGLLWGG
Trigger: GCCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp AACAAGGACCCAGACTGCGGCTGTCTCCTCAACCCATaGCCCGGTTTCTGCTGGAGACATGGACACCCTGGG +
Preference number: 3 (lower is better)
Translates to: NKDPDCGCLLNP*PGFCWRHGHPG
Trigger: CCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR CAA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 3 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR GCA 72 bp TGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCACCTGTGGAATGCAGTG +
Preference number: 3 (lower is better)
Translates to: CNCCLWGCKASP*LSDSSHLWNAV
Trigger: CACTGCATTCCACAGGTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp CCACACCAAAACCCACAGCCTGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTCGGTGAGTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: PHQNPQPATSPC*PVESGFGEWHR
Trigger: CCTGTGCCACTCACCGAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGGCTGTGGGTTTTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: SPSPTLLANRGQLNFHGSKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...GGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR CAA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 3 (lower is better)
Translates to: TWLNTTPECLHRQPCDQREGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 3 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 3 (lower is better)
Translates to: EALCNCCLWGCKASPCLSVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 3 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 3 (lower is better)
Translates to: HTWAEFSPQHKAESEEPASADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 3 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: CGETSPIQASIRSGGLLLEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: CGETSPIQASIRSGGLLLLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGACAAGGCAGGGACTTGCCAATCTGCCATCCCTACAACCCTCCCGCCCTCTCCCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 3 (lower is better)
Translates to: RQGRDLPICHPYNPPALSQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...GGAGAGGGCGGGAGGGTTGTAGGGATGGCAGATTGGCAAGTCCCTGCCTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR-3UTR CAA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: LASWLRLHSCMSGEVTAAGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAACGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp CCTCAGAGTTCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCGTGGGAAGGCCTCATaGGAGATGATCTTCGTGCTA +
Preference number: 3 (lower is better)
Translates to: PQSSPSPTLLANRGQLNFRGKAS*EMIFVL
Trigger: TAGCACGAAGATCATCTCCAATGAGGCCTTCCCACG...GAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGAACTCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR TCA 72 bp CTCAAAGGTCTGGACAGGGTGAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAA +
Preference number: 3 (lower is better)
Translates to: LKGLDRVSHSGA*GTVQLLSVGLQ
Trigger: TTGCAGCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCTCACCCTGTCCAGACCTTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 72 bp CTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTGGAGCAACCCTCTTGG +
Preference number: 3 (lower is better)
Translates to: LLGRCPPGEPAW*SLGSELEQPSW
Trigger: CCAAGAGGGTTGCTCCAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp CCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATaGTCTTCGTGCTACTGTGTGGCTCTGTCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: PRFPHVGRPHWR*SSCYCVALSPL
Trigger: CAGAGGGGACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 72 bp CAGCCACTGGGGCCTCACCGTTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCTCACTCCAGAGATCCG +
Preference number: 3 (lower is better)
Translates to: QPLGPHRFHSMT*VNRNRAHSRDP
Trigger: CGGATCTCTGGAGTGAGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGTGAGGCCCCAGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATaGCAGCTGGGAGGACTGGGTGGCAGAGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: IQRQEVKVVFET*QLGGLGGRGWG
Trigger: CCCCCACCCTCTGCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGATCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 3 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 3 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 3 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: SSTASVGVVGLQARLHFAGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 3 (lower is better)
Translates to: SELEQPSWNAASCGHTGSRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 3 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 3 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 3 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp CAGAACAGCCACTGGGGCCTCACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACAGAGCTCACTCCAGAG +
Preference number: 3 (lower is better)
Translates to: QNSHWGLTVSIP*PGSTETELTPE
Trigger: CTCTGGAGTGAGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGTGAGGCCCCAGTGGCTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 72 bp GGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCCTTTGCTTGGTTTGAG +
Preference number: 3 (lower is better)
Translates to: GLPTAVARGRLA*RPQGPSFAWFE
Trigger: CTCAAACCAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 72 bp AGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTaGCTCACAGTGGCACATGCTCCTCAACTACAGTGC +
Preference number: 3 (lower is better)
Translates to: RYARGGMLRAEL*LTVAHAPQLQC
Trigger: GCACTGTAGTTGAGGAGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR TCA 72 bp TGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: CSTSSWLMTGVR*NCFKYLVRSWC
Trigger: GCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR GCA 72 bp GTGACGGCAGCAAGGAAACCCGCACACCACACGTCATaGTACCTCCTTCCCACCACTTGCTTCTCTCTAGAG +
Preference number: 3 (lower is better)
Translates to: VTAARKPAHHTS*YLLPTTCFSLE
Trigger: CTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp AGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGAAAAGGGAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: SKRQSRLLGPAI*SAGTMGKGRAL
Trigger: CAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp AGCAGCAAGCAGCCCACAAGCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: SSKQPTSQTLHT*AEFSPQHKAES
Trigger: GGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTGGCTTGTGGGCTGCTTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCATCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 3 (lower is better)
Translates to: SSTASVGVVGLQARLHFASVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 3 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 3 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 3 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: ASSEIGMCGETSPIQASIEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 3 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 3 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 3 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 3 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 3 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 3 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 3 (lower is better)
Translates to: VTIAGACNLQRRNNGKRELSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR GCA 72 bp TTCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTaGGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGC +
Preference number: 3 (lower is better)
Translates to: FKGSTRGNKDPD*GCLLNPWPGFC
Trigger: GCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CCA 72 bp TGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCACAGGCCAGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: CRLYLGKGHNKK*LMGWKAQARGW
Trigger: CCAGCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 3 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 3 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGATGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: VTIAGACNLQRRNNGKREEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 3 (lower is better)
Translates to: VTIAGACNLQRRNNGKRELPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAATGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 3 (lower is better)
Translates to: SVCVLHHESVDDILLGVEWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 3 (lower is better)
Translates to: VTIAGACNLQRRNNGKRECPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAACTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 3 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWELSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp CCCATGATAAGCCAATGTCTCCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTGTCTGCCACTGTCCTC +
Preference number: 3 (lower is better)
Translates to: PMISQCLLWRKP*TVPTRLSATVL
Trigger: GAGGACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACATTGGCTTATCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 72 bp CGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCAATGGCCTTCTGTATT +
Preference number: 3 (lower is better)
Translates to: RLLASSMVLAGP*PTENSSMAFCI
Trigger: AATACAGAAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp CCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGAACCAGTGCTCCACCT +
Preference number: 3 (lower is better)
Translates to: PLRLRSPPRKCR*YSPGGRTSAPP
Trigger: AGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR GCA 72 bp CTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTCATTCTGAGGAATGAT +
Preference number: 3 (lower is better)
Translates to: LEETMNCANASV*HCPRVLILRND
Trigger: ATCATTCCTCAGAATGAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp GTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAACAATGGGAAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: VKEQTSVTIAGA*NLQRRNNGKRE
Trigger: CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp GATGCTAAGGGCGGAGCTGTGACTCACAGTGGCACATaGTCCTCAACTACAGTGCAGACACCCGCATTTTTG +
Preference number: 3 (lower is better)
Translates to: DAKGGAVTHSGT*SSTTVQTPAFL
Trigger: CAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CCA 72 bp GAGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGG +
Preference number: 3 (lower is better)
Translates to: EASYSALSLHTD*SPWSNAESIQR
Trigger: CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp GCACTCCAACCTGTCCATTCTGATGGGCACCATGCTTaGGAGTCAGTGTCTGACCTGCTGTGTCTTTTAGGG +
Preference number: 3 (lower is better)
Translates to: ALQPVHSDGHHA*ESVSDLLCLLG
Trigger: CCCTAAAAGACACAGCAGGTCAGACACTGACTCCCAAGCATGGTGCCCATCAGAATGGACAGGTTGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR CCA 72 bp AACCGTGGGCAACTCAACTTCCACGGTTCCCTCACGTaGGAAGGCCTCATTGGAGATGATCTTCGTGCTACT +
Preference number: 3 (lower is better)
Translates to: NRGQLNFHGSLT*EGLIGDDLRAT
Trigger: AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAAGTTGAGTTGCCCACGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR-3UTR CAA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 3 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: SALSLHTDWSPWSNAESIGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CAA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 3 (lower is better)
Translates to: EIGMCGETSPIQASIRSGLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: ASSEIGMCGETSPIQASIKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 3 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: STETELTPEIRTAQISEAEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 3 (lower is better)
Translates to: ASSEIGMCGETSPIQASIAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 3 (lower is better)
Translates to: IKAQEICHLSVCVLHHESRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 3 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp AGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTTCTGTATTTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: SLLHGFGRSLTH*EQLNGLLYFLD
Trigger: ATCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR GCA 72 bp TTTTGCCCGGTCACTTGGCTGAACACCACTCCAGAATaGCTACATCGACAGCCATGTGACCAGAGGCTTGAT +
Preference number: 3 (lower is better)
Translates to: FCPVTWLNTTPE*LHRQPCDQRLD
Trigger: ATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp GTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCAGCGCAGGAACAATGG +
Preference number: 3 (lower is better)
Translates to: VSWSQGANVSHD*WGLQFAAQEQW
Trigger: CCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp TCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAA +
Preference number: 3 (lower is better)
Translates to: SWSQGANVSHDC*GLQFAAQEQWE
Trigger: TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp CCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTG +
Preference number: 3 (lower is better)
Translates to: PRVQLHAVVQGL*ALRLVKCWSSL
Trigger: CAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp TTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGC +
Preference number: 3 (lower is better)
Translates to: LLQVPGEELVHY*NVLCFHWSQPS
Trigger: GCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 3 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 3 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAACTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 3 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWELAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSETSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 3 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 3 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 3 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 3 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 3 (lower is better)
Translates to: FLESRSKRQSRLLGPAICAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCATTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 3 (lower is better)
Translates to: STETELTPEIRTAQISEALERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 3 (lower is better)
Translates to: LRFGKLAALTTITTTKIHRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 3 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 3 (lower is better)
Translates to: HPSLEVQFHSPILPGHLASADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 3 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 3 (lower is better)
Translates to: TSKPGSTISQPNFARSLGILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 3 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: TSKPGSTISQPNFARSLGKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 3 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 3 (lower is better)
Translates to: ASSEIGMCGETSPIQASIKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 3 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 3 (lower is better)
Translates to: FLESRSKRQSRLLGPAICAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 3 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CCA 72 bp CATGCTCCTCAACTACAGTGCAGACACCCGCATTTTTaGGGCCTTACAGGAAGACAGTTTTACCTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: HAPQLQCRHPHF*GLTGRQFYLQV
Trigger: CACCTGCAGGTAAAACTGTCTTCCTGTAAGGCCCCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CCA 72 bp CTCAATGGCCTTCTGTATTTCCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCACAGGCTGATCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LNGLLYFLDPLC*QRVHLHRLILG
Trigger: GCCCAGGATCAGCCTGTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGCCATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678332.1
3UTR-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: TSKPGSTISQPNFARSLGPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 3 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 3 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 3 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 3 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR TCA 72 bp ACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCCTACATCGACAGCCAT +
Preference number: 3 (lower is better)
Translates to: TISQPNFARSLG*TPLQNAYIDSH
Trigger: ATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp CTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTATCTTGGAAAGGGGCA +
Preference number: 3 (lower is better)
Translates to: LLPSPDLPLITS*YHLQAVSWKGA
Trigger: TGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATCTGGACTTGGCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp GTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAAGAATTCAGGACCACA +
Preference number: 3 (lower is better)
Translates to: VVQGLWALRLVK*WSSLGKEFRTT
Trigger: TGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp ATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTaGGAAACTGGCAGCACTGACAACCATCACTACCAC +
Preference number: 3 (lower is better)
Translates to: IDSHVTRGLITF*ETGSTDNHHYH
Trigger: GTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 3 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 3 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 3 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 3 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 3 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 3 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAACAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 3 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 3 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 3 (lower is better)
Translates to: HFLLPLAGCILERGTTRNQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp ACGCGTCTGTCTGCCACTGTCCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAGCTTTTCATTAAAGAC +
Preference number: 3 (lower is better)
Translates to: TRLSATVLGSSF*GMIWIQLFIKD
Trigger: GTCTTTAATGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGGACCCGAGGACAGTGGCAGACAGACGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR GCA 72 bp CTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGAAAAGCAAAATCTCAC +
Preference number: 3 (lower is better)
Translates to: LMLQGGPRASSN*IIPGSGKAKSH
Trigger: GTGAGATTTTGCTTTTCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp AAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAATGCCTACATCGACAG +
Preference number: 3 (lower is better)
Translates to: KYNFTAQFCPVT*LNTTPECLHRQ
Trigger: CTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp TTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: FQVPGSPKVGKT*ALCPLISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp TCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCA +
Preference number: 3 (lower is better)
Translates to: SMQLSKAFGPLG*LNAGRLWGKNS
Trigger: TGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CCA 72 bp ATTGTAGCACCAGTCCAACCTTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAAGGTAATACTGCAGGT +
Preference number: 3 (lower is better)
Translates to: IVAPVQPSLPPC*GISNCKGNTAG
Trigger: ACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTGCTACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
3UTR-3UTR CAA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: HPSLEVQFHSPILPGHLATSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 3 (lower is better)
Translates to: ITSKPGSTISQPNFARSLGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCATTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 3 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 3 (lower is better)
Translates to: TSKPGSTISQPNFARSLGQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 3 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 3 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: VNVVERISSFETLVGWMVTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR-3UTR CAA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 3 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp AGCAGAGGACAGCACTGGGATCCAACTCTTCCATCTTaGAGTAATACCAGTGGAGAACGTCAATCCAAGTTG +
Preference number: 3 (lower is better)
Translates to: SRGQHWDPTLPS*SNTSGERQSKL
Trigger: CAACTTGGATTGACGTTCTCCACTGGTATTACTTCAAGATGGAAGAGTTGGATCCCAGTGCTGTCCTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR CCA 72 bp CTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAAATGGCTAATGGGTTG +
Preference number: 3 (lower is better)
Translates to: LITSCYHLQAVS*KGAQQEMANGL
Trigger: CAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 3 (lower is better)
Translates to: ITSKPGSTISQPNFARSLTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 3 (lower is better)
Translates to: ITSKPGSTISQPNFARSLHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR-3UTR CAA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGAACGTCAATCCAAGTaGATCCTATACATTCACCTC +
Preference number: 3 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPERQSK*ILYIHL
Trigger: GAGGTGAATGTATAGGATCAACTTGGATTGACGTTC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR GCA 72 bp TACCATCTTCTTCTCTGTGTCATAGATATGGATGTTTaGTGGGATGGCGCTAATGAACCCAACCAATTTCCG +
Preference number: 3 (lower is better)
Translates to: YHLLLCVIDMDV*WDGANEPNQFP
Trigger: CGGAAATTGGTTGGGTTCATTAGCGCCATCCCAGCAAACATCCATATCTATGACACAGAGAAGAAGATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
3UTR CCA 72 bp GTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGAGGGCAGCGTATAAAA +
Preference number: 3 (lower is better)
Translates to: VERISSFETLVG*MVHDGGGQRIK
Trigger: TTTTATACGCTGCCCTCCACCATCATGAACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
3UTR TCA 72 bp TTACTTAGGCTAAAATTACAGAGAATAGGTGTTCTCTaGGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAG +
Preference number: 3 (lower is better)
Translates to: LLRLKLQRIGVL*AFQQMAEKLVQ
Trigger: CTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTTAGCCTAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp CTGGGCCCGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCTCTCGTCCGCCATCTTaGGTTGCGAGAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPGPPPVLWEQTHTQPASRPPS*VARAGL
Trigger: GAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGA...GGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCGGGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp TCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: SSTHGPVSAGDMDTLGRAGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...TGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTCTTTCTGCTGGAGACATaGACACCCTGGGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GSTACAVGADSHPAGPTLFLLET*TPWAGQ
Trigger: CTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAA...GAGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGGAAGTTCCGAGTGGCTaGGCCCGGGTCCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWAREVPSG*ARVHRL
Trigger: CAGGCGGTGGACCCGGGCCCAGCCACTCGGAACTTC...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RVHRLCCGSRLTPSRPHTGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...AGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTCCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: GSTACAVGADSHPAGPTLPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...GAGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: RVHRLCCGSRLTPSRPHTRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...AGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LVRLHGAMGVHHFAQLGDRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...GTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RLSPQPMARFLLETWTPWTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CAGGCACCAAGTGCCCGCCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGCTCCCGCCCTCTCCATaGTCCCCATCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QAPSARLTRYARGGMLRALPPSP*SPSGSC
Trigger: GCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAG...CGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp CTGGGCCCGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCGCTAAGAAAGTGTCATaGCAGAAGAGGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGPGPPPVLWEQTHTQPAAKKVS*QKRAAA
Trigger: AGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGC...GGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: GCLLNPWPGFCWRHGHPGGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...CCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTCCACGGTTCCCTCACGTaGGAAGGCCTCATTGGAGAT +
Preference number: 4 (lower is better)
Translates to: GSTACAVGADSHPAGPTLHGSLT*EGLIGD
Trigger: ATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTG...GAGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GTCCCCTGTGGCACTGGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VPCGTGGGRAKKVSCQKRLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...CCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCCAGTGCCACAGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTGGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GPVSAGDMDTLGRAAWTLGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...CAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCGACAAGGCAGGGACTTaGCAATCTGCCATCCCTACA +
Preference number: 4 (lower is better)
Translates to: PPALSMLPIWLLQAPSARDKAGT*QSAIPT
Trigger: TGTAGGGATGGCAGATTGGCAAGTCCCTGCCTTGTC...GCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp TCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCGGGTCCACCGCCTGTaGTGTGGGAGCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: SPSPTLLANRGQLNFHGSRVHRL*CGSRLT
Trigger: TGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCG...GGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTGTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: GPVSAGDMDTLGRAAWTLWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...CAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTGCTTCGTGCTACTGTGTaGCTCTGTCCCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPVSAGDMDTLGRAAWTLLRATV*LCPLCH
Trigger: ATGGCAGAGGGGACAGAGCCACACAGTAGCACGAAG...CAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTCCTCACACCAGTTGCTaGGAGGGGAACGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: PQPYPPGKPWATQLPRFPPHTSC*EGNADL
Trigger: CAGGTCAGCGTTCCCCTCTCAGCAACTGGTGTGAGG...AGGGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTACTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: WRILSLSGSTGPWVFTTSTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RPLHAPHLAPAGTKCPPYPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...GTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGCAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: GQGVGLLADIVLVRLHGAPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...GGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTCCGCCATCTTGAGTTaGGAGAGCAGGGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPASAILS*ESRAPR
Trigger: GCGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592782.5
ENST00000676828.1
CDS-3UTR CCA 90 bp CCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGTCGCTGCAGTGCTCATaGCCGTTCCCGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PCSPSGSCRHQVPALPDTSLQCS*PFPFPS
Trigger: GGAAGGGAACGGGAACGGCCATGAGCACTGCAGCGA...CGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CAACCCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: QPSRPLHAPHLAPAGTKCWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...GCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCTGGCCCGGTTTCTGCTaGAGACATGGACACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SHVHQTSQGKLAHAPAHPWPGFC*RHGHPG
Trigger: CCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCA...GGGGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp TCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLSGSTGPWVFTTSPSLGRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...CCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGAGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PCQAPRGHGCSPLRPAWGVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...TCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTGGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LGVEPVLHLLLAHDGRKVGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...CACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PQPYPPGKPWATQLPRFPQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...AGGGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGCCAACCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGPTFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGGTTGG...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585561.5
CDS-3UTR GCA 90 bp TGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: WRILSLSGSTGPWVFTTSFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...CGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp CCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PCQAPRGHGCSPLRPAWGHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...TCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTAACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGCAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: GQGVGLLADIVLVRLHGALPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...GGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGGAAGACAGTTTTACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGEDSFT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTAAAACTGTCTTC...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp AAGTGCCCGCCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTGCCTGCAGGCACCAAGTaGCCGCCTTACCAGATACGC +
Preference number: 4 (lower is better)
Translates to: KCPPYQIRQRWDAKGGAVPAGTK*PPYQIR
Trigger: GCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGG...CACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp GTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTCGCTGCAGTGCTCATaGCCGTTCCCGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPPRQCKLLGRCPPGEPASLQCS*PFPFPS
Trigger: GGAAGGGAACGGGAACGGCCATGAGCACTGCAGCGA...GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PPALSMLPIWLLQAPSARAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACCCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: NPPALSMLPIWLLQAPSALSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...GGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp ACCGATGCCAATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: TDANTCRCQRALVVPPRQAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAASGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: SLSGSTGPWVFTTSPSLGAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...CCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGCCACAGATACGCCAGAGGTaGGATGCTAAGGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: CSPSGSCRHQVPALPDTPQIRQR*DAKGGA
Trigger: AGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTG...TGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGTCCATGCTCCCCATCTaGCTCCTGCAGGCACCAAGT +
Preference number: 4 (lower is better)
Translates to: PCSPSGSCRHQVPALPDTSMLPI*LLQAPS
Trigger: ACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA...CGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGCCCACCATCTCCAAATaGCAGCAGCCAGCAGACACC +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWPTISK*QQPADT
Trigger: GGTGTCTGCTGGCTGCTGCCATTTGGAGATGGTGGG...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp GTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCAGCCCTACCCTCCTaGCAAACCGTGGGCAACTCA +
Preference number: 4 (lower is better)
Translates to: VHTSIRPPRENWPTLQLTPALPS*QTVGNS
Trigger: TGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGG...GGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: LHTRVHTSIRPPRENWPTKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...CGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: HESVDDILLGVEPVLHLLRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPASCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTTTGAGCCCAGGAGGTTaGGGCTGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLLSPGG*GCGQPC
Trigger: ACATGGCTGACCGCAGCCTCAACCTCCTGGGCTCAA...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585561.5
ENST00000676753.1
CDS-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCCRRLH*CLTLVR
Trigger: GCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCA...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp CTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRWENFTSISFRGFRDRCLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...GCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGCTCGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: IAQVQSIPGEALGQGVGLANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...GAGCCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGATCGCTGCAGTGCTCATaGCCGTTCCCGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGSLQCS*PFPFPS
Trigger: GGAAGGGAACGGGAACGGCCATGAGCACTGCAGCGA...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCTCGCTGCAGTGCTCATaGCCGTTCCCGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCSLQCS*PFPFPS
Trigger: GGAAGGGAACGGGAACGGCCATGAGCACTGCAGCGA...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: QRALVVPPRQCKLLGRCPQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...AGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASIASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCTCAGAGTTCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCCTCCTGGCAAACCGTaGGCAACTCAACTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PQSSPSPTLLANRGQLNFPPGKP*ATQLPR
Trigger: CCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGG...GAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGAACTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp TCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SMLPIWLLQAPSARLTRYRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR TCA 90 bp TCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: SMLPIWLLQAPSARLTRYVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...GTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR TCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACCGATGCCAATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: TDANTCRCQRALVVPPRQGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLRHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVASLASLLHGFGRSLTHASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSTASVGVVGLQARLHFAATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SSTASVGVVGLQARLHFATPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTACGCTGGGAAAGCTGTaGGGAGAAGCCCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFTLGKL*GEALSS
Trigger: GGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGCGT...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR TCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTCTGAGAGGGGAACGCTaGCCTGCTGGTCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATLRGER*PAGLAS
Trigger: GCTGGCCAGACCAGCAGGTCAGCGTTCCCCTCTCAG...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp GTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCGAGGCAGAGCTGAGTTaGCAGTGGCCCAAAGACTCT +
Preference number: 4 (lower is better)
Translates to: VHTSIRPPRENWPTLQLTEAELS*QWPKDS
Trigger: AGAGTCTTTGGGCCACTGTCAACTCAGCTCTGCCTC...GGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACTTGGGAGTCAGTGTCTaGCCTGCTGTGTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LVRLHGAMGVHHFAQLGDLGVSV*PAVSFR
Trigger: CCTAAAAGACACAGCAGGTCAGACACTGACTCCCAA...GTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAACTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQELRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ACCGATGCCAATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TDANTCRCQRALVVPPRQHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CCTCAGAGTTCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PQSSPSPTLLANRGQLNFHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...GAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGAACTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWETRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCTCAGAGTTCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: PQSSPSPTLLANRGQLNFKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...GAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGAACTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPATDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACCGATGCCAATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TDANTCRCQRALVVPPRQTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: SHVHQTSQGKLAHAPAHPPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...GGGGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVRLHGAMGVHHFAQLGDGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...GTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LVASLASLLHGFGRSLTHPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGGTCGCCTACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: GGGRAKKVSCQKRAAAQEVAYLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTAGGCGAC...CTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp GGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGCCATGGCCCGGTTTCTaGTGGAGACATGGACACCCT +
Preference number: 4 (lower is better)
Translates to: GGGRAKKVSCQKRAAAQEPWPGF*WRHGHP
Trigger: AGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGG...CTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTTCTCCCGGCCCCGCCTaGTGGCCGGACGTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFSPGPA*WPDVRS
Trigger: AGACCGGACGTCCGGCCAGCAGGCGGGGCCGGGAGA...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592782.5
CDS-3UTR CCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGTCGCTGCAGTGCTCATaGCCGTTCCCGTTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLSLQCS*PFPFPS
Trigger: GGAAGGGAACGGGAACGGCCATGAGCACTGCAGCGA...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGACCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGAGGAAACCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: EGLRKCHARRGQQLRRGNPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...GTTTCCTCTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAACCCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: QPSRPLHAPHLAPAGTKCDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RLSPQPMARFLLETWTPWLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...CCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTGTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LGVEPVLHLLLAHDGRKVYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...CACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAACAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: EALCNCCLWGCKASPCLSVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCACAGGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: MALMNPTNFRLETTRTPQASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...CTGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGAGGAAACCTGGGCCGGGCAGCCTaGACTCTGGCTATGTGTCGC +
Preference number: 4 (lower is better)
Translates to: EGLRKCHARRGQQLRRGNLGRAA*TLAMCR
Trigger: GCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAG...GTTTCCTCTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGAGGAAACGAGACATGGACACCCTaGGCCGGGCAGCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: EGLRKCHARRGQQLRRGNETWTP*AGQPGL
Trigger: GAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTC...GTTTCCTCTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACCCGCGCCCCACTACATaGGGGGTTCCTCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHPRPTT*GVPLPA
Trigger: GGCCGGGAGAGGAACCCCCCATGTAGTGGGGCGCGG...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592782.5
CDS-3UTR CCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCCCCACAGCTTCCATCTaGCCGGGCCTCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSPTASI*PGLSVP
Trigger: GGGCACTGAGAGGCCCGGCCAGATGGAAGCTGTGGG...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS-3UTR TCA 90 bp TCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACAGGCTGATCCTGGGCTaGATCTGTCTCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SMLPIWLLQAPSARLTRYRLILG*ICLTAF
Trigger: AAAGGCAGTGAGACAGATTCAGCCCAGGATCAGCCT...GTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR TCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGAGGCTGATCCTGGGCTaGATCTGTCTCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLRLILG*ICLTAF
Trigger: AAAGGCAGTGAGACAGATTCAGCCCAGGATCAGCCT...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585561.5
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGTTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: RLSPQPMARFLLETWTPWFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...CCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: GSWRILSLSGSTGPWVFTNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: GPVSAGDMDTLGRAAWTLKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp CTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTGCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LGVEPVLHLLLAHDGRKVPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...CACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTAGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTCTCGTCCGCCATCTTaGGTTGCGAGAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTSRPPS*VARAGL
Trigger: GAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587670.2
ENST00000592782.5
CDS-3UTR GCA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCATTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GMALMNPTNFRLETTRTPFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGAGGAAACTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: EGLRKCHARRGQQLRRGNFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...GTTTCCTCTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp CCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTGACTCACAGTTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: PYQIRQRWDAKGGAVTHSSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...ACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: LHTRVHTSIRPPRENWPTANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...CGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp GGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GGGRAKKVSCQKRAAAQETDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp TCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPSPTLLANRGQLNFHGSLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...GGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESILQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCTGGCTCATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLAHDGRKVKLLQVPGEEMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...CTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATGAGCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCTGTCTCCTCAACCAGGGGAACGCTGACCTaGTGGTCTGGCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SKVQLEVTRTQTAAVSSTRGTLT*WSGQQR
Trigger: CCTCTGCTGGCCAGACCAGCAGGTCAGCGTTCCCCT...GGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPASSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678576.1
CDS-3UTR CCA 90 bp AACCCTCCCGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NPPALSMLPIWLLQAPSALRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...GGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCGGGAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCACAGGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: MALMNPTNFRLETTRTPQGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...CTGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTIGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCACTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAALSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVRLHGAMGVHHFAQLGDFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...GTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: EALCNCCLWGCKASPCLSGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCACCACCGCCTGTGCTGTaGGAGCAGACTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: GQQREGIFKGSTRGNKDPPPPVL*EQTHTQ
Trigger: CTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGG...TGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCTGGATCCTCTCTGCTaGCAAAGAGTTCATCCCCGG +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGLDPLC*QRVHPR
Trigger: CCGGGGATGAACTCTTTGCCAGCAGAGAGGATCCAG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587670.2
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGATGGGCACCATGCTTaGGAGTCAGTGTCTGACCTG +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFDGHHA*ESVSDL
Trigger: CAGGTCAGACACTGACTCCCAAGCATGGTGCCCATC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR CAA 72 bp GGGACCGATGCCAATACCTGCAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GTDANTCRCQRA*VVPPRQCKLLG
Trigger: TCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AGACAAGGCAGGGACTTGCCAATCTGCCATCCCTACAACCCTCCCGCCCTCTCCTTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: RQGRDLPICHPYNPPALSFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...GGAGAGGGCGGGAGGGTTGTAGGGATGGCAGATTGGCAAGTCCCTGCCTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR TCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCAGACACGACCGGAGGTaGCGTCACGCAGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELARHDRR*RHAAHA
Trigger: GGCGTGGGCTGCGTGACGTCACCTCCGGTCGTGTCT...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WRILSLSGSTGPWVFTTSNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...CGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LVASLASLLHGFGRSLTHSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCTAAGGGCGGAGCTGTaGCTCACAGTGGCACATGCT +
Preference number: 4 (lower is better)
Translates to: QRALVVPPRQCKLLGRCPLRAEL*LTVAHA
Trigger: AGCATGTGCCACTGTGAGTCACAGCTCCGCCCTTAG...AGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR TCA 90 bp GTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCAGGCCTCATTGGAGATaGTCTTCGTGCTACTGTGTG +
Preference number: 4 (lower is better)
Translates to: VHTSIRPPRENWPTLQLTRPHWR*SSCYCV
Trigger: CACACAGTAGCACGAAGATCATCTCCAATGAGGCCT...GGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGCCAACCTGTCCATTCTaGTGGGCACCATGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLPTCPF*WAPCLG
Trigger: TCCCAAGCATGGTGCCCATCAGAATGGACAGGTTGG...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR TCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTCTCCAAAGCAGATCTaGGGATGGCACCGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPSPKQI*GWHRGS
Trigger: GCTGCCCCGGTGCCATCCTCAGATCTGCTTTGGAGA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS-3UTR GCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACACTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGAGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: PCQAPRGHGCSPLRPAWGAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...TCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPALVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPARCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACTCACAGTGGCACATaGTCCTCAACTACAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPCSPSGSCRHQVPALPDTHSGT*SSTTVQ
Trigger: CTGCACTGTAGTTGAGGAGCATGTGCCACTGTGAGT...ATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLSPQPMARFLLETWTPWAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...CCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTIGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCACACTCAACCTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAACTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: PTLNLHTRVHTSIRPPRELSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...TTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAGGTTGAGTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSWRILSLSGSTGPWVFTSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...GGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: EALCNCCLWGCKASPCLSVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCTGTCTCCTCAACCGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SKVQLEVTRTQTAAVSSTAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...GGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASICSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTGGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LGVEPVLHLLLAHDGRKVETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...CACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: RTGATLLERSFLWTHRKLVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGATGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAATGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCAGACACCCGCATTTTTaGGGCCTTACAGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: VPPRQCKLLGRCPPGEPARHPHF*GLTGRQ
Trigger: CTGTCTTCCTGTAAGGCCCCAAAAATGCGGGTGTCT...GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTGGGCAGCCTGGACTCTaGCTATGTGTCGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: PSRGKASLEMIFVLLCGSGQPGL*LCVAYL
Trigger: AAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCC...AGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCGCGCCCCACTACATaGGGGGTTCCTATTGGACAA +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMPRPTT*GVPIGQ
Trigger: TTGTCCAATAGGAACCCCCCATGTAGTGGGGCGCGG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676828.1
3UTR CAA 72 bp GAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGGAAAAGGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: EQTSVTIAGACN*QRRNNGKREGP
Trigger: AGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAANQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTCCCCTGTGGCACTGGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VPCGTGGGRAKKVSCQKRPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...CCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCCAGTGCCACAGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAACAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVASLASLLHGFGRSLTHVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: HESVDDILLGVEPVLHLLSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTCTCGTCCGCCATCTTaGGTTGCGAGAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINSRPPS*VARAGL
Trigger: GAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000592782.5
ENST00000676828.1
CDS-3UTR TCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTCTCGTCCGCCATCTTaGGTTGCGAGAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPSRPPS*VARAGL
Trigger: GAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGA...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000592782.5
ENST00000676828.1
CDS-3UTR TCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTGCCTCTCAGTGCCCCTaGTGCAGAAAGACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCASQCP*CRKTPV
Trigger: AACCGGGGTCTTTCTGCATCAGGGGCACTGAGAGGC...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS-3UTR GCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCTGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGC +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTICRRLH*CLTLVR
Trigger: GCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCA...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAATGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SVCVLHHESVDDILLGVECRRLH*CLTLVR
Trigger: GCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCA...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCATCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEASQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp TCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCTGTCTCCTCAACCTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SKVQLEVTRTQTAAVSSTSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...GGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AGGACCCAGACTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RTQTAAVSSTHGPVSAGDFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...GTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp GTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: VKLLQVPGEELVHYWNVLTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...AAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGACTCGAACCCCACAGTaGCACTGGGGGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLTRTPQ*HWGSQP
Trigger: CGGCTGGCTCCCCCAGTGGCACTGTGGGGTTCGAGT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: QRALVVPPRQCKLLGRCPKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...AGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTAGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCACTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAALVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: SHVHQTSQGKLAHAPAHPLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...GGGGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LVASLASLLHGFGRSLTHFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAANVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LVRLHGAMGVHHFAQLGDLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...GTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCAGTTTTACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: VPPRQCKLLGRCPPGEPASFTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTAAAACT...GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGATCCGCCATCTTGAGTTaGGAGAGCAGGGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRSAILS*ESRAPR
Trigger: GCGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGA...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCTCCGCCATCTTGAGTTaGGAGAGCAGGGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLSAILS*ESRAPR
Trigger: GCGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGA...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592782.5
ENST00000676828.1
CDS-3UTR CCA 90 bp CCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTGACTCACAGTTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PYQIRQRWDAKGGAVTHSSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...ACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585561.5
ENST00000676753.1
CDS-3UTR CCA 90 bp GGGCAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQGVGLLADIVLVRLHGASFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...GGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000585561.5
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: VPPRQCKLLGRCPPGEPALDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543908.5
ENST00000590114.6
ENST00000678332.1
CDS-3UTR CCA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543908.5
ENST00000590114.6
ENST00000678332.1
CDS-3UTR CCA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SPSPTLLANRGQLNFHGSLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...GGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMGSTGP*VFTTSP
Trigger: GGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGGAGCTGTGACTCACAGTCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PYQIRQRWDAKGGAVTHSLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...ACTGTGAGTCACAGCTCCGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: WRILSLSGSTGPWVFTTSVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...CGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQEAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SHVHQTSQGKLAHAPAHPELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...GGGGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTATACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: EALCNCCLWGCKASPCLSETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCTAGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: TRPSDLPGKTGPRSSSPLETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...TAGGGGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp TCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: SLSGSTGPWVFTTSPSLGGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...CCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: LVRLHGAMGVHHFAQLGDIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...GTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCAGCATTCCCACGGGTaGCACGGCCCCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQQHSHG*HGPHPK
Trigger: CTTGGGATGGGGGCCGTGCCACCCGTGGGAATGCTG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTGTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LGVEPVLHLLLAHDGRKVFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...CACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGTGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGCCTCAGGCCTCCCCTaGTTCTGGGGAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDASGLP*FWGRWA
Trigger: GGCCCACCTTCCCCAGAACCAGGGGAGGCCTGAGGC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp ATCAATGAGGTCTGCTTCTGCGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGGTCTGGCCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: INEVCFCGPSIA*SQNAGRSGPAG
Trigger: TCCTGCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp GGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAGALLECPLFP*VAAQLSWESLA
Trigger: TGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTATTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAACAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPNQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCACTCCCCTAGGCTTCTaGGAGCCAGCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLTPLGF*EPASRG
Trigger: CCCCCTACTTGCTGGCTCTCAGAAGCCTAGGGGAGT...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTGTACAGTTCTTTTAGCACACCACGATCGCCCAGGTCCAAAGCATCCCAGGTGGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: VYSSFSTPRSPRSKASQVAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...CACCTGGGATGCTTTGGACCTGGGCGATCGTGGTGTGCTAAAAGAACTGTACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGATCTCGTCCGCCATCTTaGGTTGCGAGAGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRSRPPS*VARAGL
Trigger: GAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGA...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGC +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNCRRLH*CLTLVR
Trigger: GCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCA...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACATGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGC +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTCRRLH*CLTLVR
Trigger: GCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCA...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp TCATATTTCTGCTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTACTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: SYFCSGGRTSLQSASVGLLRQRR*RRLHCC
Trigger: ACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAG...TAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACATTCCCTTCCATCATCTaGGGCAGCGGAGGTGCCGGC +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTFPSII*GSGGAG
Trigger: GCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAA...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ACCGATGCCAATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TDANTCRCQRALVVPPRQFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590114.6
ENST00000678332.1
CDS-3UTR GCA 90 bp CCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGAATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: PCQAPRGHGCSPLRPAWGIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...TCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCACCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GQQREGIFKGSTRGNKDPPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...TGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: HDGRKVKLLQVPGEELVHGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...GTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: LRWENFTSISFRGFRDRCQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...GCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASIQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGCCAACGCGTCTGTCTaGCACTGTCCTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMANASV*HCPRVL
Trigger: GAGGACCCGAGGACAGTGGCAGACAGACGCGTTGGC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTCTGCAGGAAAGTCCCTaGCCAGGGTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITLQESP*PGSAPA
Trigger: GGCTGGGGCTGACCCTGGGCAGGGACTTTCCTGCAG...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCTGGCTCATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLAHDGRKVKLLQVPGEECFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...CTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATGAGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSENEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: VPPRQCKLLGRCPPGEPALLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: HTWAEFSPQHKAESEEPALLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAANTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTACCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGCTCTAGCAGCAGTCTaGAGAGCGGGCAGCATTCCC +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAALAAV*RAGSIP
Trigger: GGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGC...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAELGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: LRWENFTSISFRGFRDRCLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...GCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTACCCAGACATGGCACCTaGCTGCCAGCCAGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVPRHGT*LPASQY
Trigger: ATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGG...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PSRGKASLEMIFVLLCGSSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...AGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000543908.5
ENST00000590114.6
ENST00000678332.1
CDS-3UTR CCA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAACCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCCACTTCGCCCAGCTTaGGGACGGGCTGCGTATCCC +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNPLRPA*GRAAYP
Trigger: GGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAADMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: GGGRAKKVSCQKRAAAQESLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...CTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: QGVGLLADIVLVRLHGAMIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...CATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAELSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCAGTGGCTTCGGTGAGTaGCACAGGGCTGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCSGFGE*HRAEPG
Trigger: GCCAGGCTCAGCCCTGTGCCACTCACCGAAGCCACT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCATGTCTCCTCAACCCATaGCCCGGTTTCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GQQREGIFKGSTRGNKDPCLLNP*PGFCWR
Trigger: TCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACA...TGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
3UTR CAA 72 bp ACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAGGCAGGTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: TQSMRSASADRP*LCLRMQAGLAL
Trigger: CAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATTGATTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp CAGGAAGACAGTTTTACCTGCAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QEDSFTCRCQRA*VVPPRQCKLLG
Trigger: TCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTAAAACTGTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
3UTR CAA 72 bp TCAACTTCCACGGTTCCCTCACGTGGGAAGGCCTCATaGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: STSTVPSRGKAS*EMIFVLLCGSV
Trigger: GACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCAGGCTGATCCTGGGCTaGATCTGTCTCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASIRLILG*ICLTAF
Trigger: AAAGGCAGTGAGACAGATTCAGCCCAGGATCAGCCT...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTIKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTACCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TSPFAFSTTKVSMIFSWGPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATGCCCGGTCACTTGGCTaGACACCACTCCAGAATGCC +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNARSLG*TPLQNA
Trigger: GGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGC...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGGCCACCTGGTTTCAGTaGGGGAGATGCTGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQATWFQ*GRCWGL
Trigger: AAGGCCCCAGCATCTCCCTCACTGAAACCAGGTGGC...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAESPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCCATGTTCGTACTTCTGCACTCCAACCTGTCCATTCTGATGGGCACCATGCTTGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: AMFVLLHSNLSILMGTMLAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...AAGCATGGTGCCCATCAGAATGGACAGGTTGGAGTGCAGAAGTACGAACATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: QGVGLLADIVLVRLHGAMIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...CATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQEKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: FTSISFRGFRDRCQYLQVTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGACTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCACCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEAPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: FTSISFRGFRDRCQYLQVQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...CACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCACAGCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: MALMNPTNFRLETTRTPQQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...CTGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: HESVDDILLGVEPVLHLLGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCACTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEALRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: RTSLQSASVGLGTDANTCPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...GCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESILGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GCCATGTTCGTACTTCTGCACTCCAACCTGTCCATTCTGATGGGCACCATGCTTACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AMFVLLHSNLSILMGTMLTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...AAGCATGGTGCCCATCAGAATGGACAGGTTGGAGTGCAGAAGTACGAACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASILPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATATGGCGCTACCACACTaGAGGGCTCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNMALPH*RAPVGR
Trigger: CCTCCCCACAGGAGCCCTGCAGTGTGGTAGCGCCAT...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTCCTTCCAACAGCAGTTaGTCGAGGACGGTTAGCGTG +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGPSNSS*SRTVSV
Trigger: CACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGG...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCCAGCTGTCCACTCTTaGCTCCCACAGCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRPAVHS*LPQLPS
Trigger: AGATGGAAGCTGTGGGAGGCAAGAGTGGACAGCTGG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS-3UTR CCA 90 bp CAGGCACCAAGTGCCCGCCTTACCAGATACGCCAGAGGTGGGATGCTAAGGGCGTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: QAPSARLTRYARGGMLRASFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...CGCCCTTAGCATCCCACCTCTGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTAGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: SVCVLHHESVDDILLGVEPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGGACCCAGACTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: RTQTAAVSSTHGPVSAGDIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCAGCCCAGCTGTCTTaGGAGTCTCTGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCAAQLS*ESLAVG
Trigger: ACCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGTACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMACSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LTWEGLIGDDLRATVWLCQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...ACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: CGETSPIQASIRSGGLLLGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CFKYLVRSWCTTGMSFVSECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...GGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGTGGCTGAAGGGGTCTaGGTATTGGCCCCACGCCAC +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDVAEGV*VLAPRH
Trigger: GTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCAC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAAAATGGCTAATGGGTTaGAAGGCACAGGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQKWLMG*KAQARG
Trigger: GCCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTT...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTAGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGACCCACTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: LVASLASLLHGFGRSLTHLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...GTGGGTCAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAACAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASIGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAGGCCTCGATCCGGAGTaGAGGCCTCCTACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQEGLDPE*RPPTQL
Trigger: GAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCC...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGATTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SSTASVGVVGLQARLHFAVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTCTCCCAGGGAAGGCCTaGCTATTCAGGCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPLPGKA*LFRLLG
Trigger: ACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAG...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCACCCCTTTCCCACGCTaGGAAAGCTGTGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSTPFPR*ESCEEK
Trigger: CTTCTCCTCACAGCTTTCCCAGCGTGGGAAAGGGGT...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR CCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGGCAGCACTGGCCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRGSTGL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGGCCAGTGCTGCC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGCTATTCAGGCTCCTTaGTGGCGCCTCCATTTTGGC +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQAIQAP*WRLHFG
Trigger: GCCAAAATGGAGGCGCCACCAAGGAGCCTGAATAGC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR TCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTAGGCTGATCCTGGGCTaGATCTGTCTCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVRLILG*ICLTAF
Trigger: AAAGGCAGTGAGACAGATTCAGCCCAGGATCAGCCT...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCATTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEAFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASINQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: LTWEGLIGDDLRATVWLCNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...ACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp GTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: VKLLQVPGEELVHYWNVLGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...AAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCACCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEAPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: REGIFKGSTRGNKDPDCGPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...GCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR TCA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR TCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTAGAAGGGGAGCTGGATaGGGTTCTCCAGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGRRGAG*GSPDPL
Trigger: AAGAGGATCTGGAGAACCTCATCCAGCTCCCCTTCT...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCCAGTCATCCCAGCTaGTTCAGAAGGGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCASHPS*FRRGAG
Trigger: TCCAGCTCCCCTTCTGAATCAGCTGGGATGACTGGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAACCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: RTGATLLERSFLWTHRKLFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTCGAGGACGGTTAGCGTaGAGGCCTCAGGGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KRGLGVNVVERISSFETLRGRLA*RPQGPS
Trigger: GGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCG...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACATCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp TCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: SMLPIWLLQAPSARLTRYIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...GTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: EALCNCCLWGCKASPCLSIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTIGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKRESFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCTGGCTCATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLAHDGRKVKLLQVPGEELVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...CTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATGAGCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSELHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHCFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWENEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTTCACAGCCCAATTTTaGCCGGTCACTTGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPFTAQF*PVTWLN
Trigger: GTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACACGATTGCTGGGGCCTaGAATTTGCAGCGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHTIAGA*NLQRRN
Trigger: GTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGT...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LRWENFTSISFRGFRDRCNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...GCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: TSPFAFSTTKVSMIFSWGNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCAGCTCCTCAACTACAGTaGAGACACCCGCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: GMALMNPTNFRLETTRTPAPQLQ*RHPHFW
Trigger: CCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGC...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590114.6
ENST00000676753.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGATGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTCATGATGGGGAGCCAGCCGGGTaGCCGGAGAGCCCACAAAAG +
Preference number: 4 (lower is better)
Translates to: VVERISSFETLVGWMVHDGEPAG*PESPQK
Trigger: CTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCC...ATCATGAACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTACTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAACTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQELSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKRESWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: LTWEGLIGDDLRATVWLCVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...ACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCATGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEACLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTTGCTCCACCTCCTCCTaGCTCATGACGGGCGTAAGG +
Preference number: 4 (lower is better)
Translates to: IKAQEICHLSVCVLHHESCSTSS*LMTGVR
Trigger: CCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCA...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: VPPRQCKLLGRCPPGEPAKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGAACTGGTAGCTTCGCTTGCTAGCCTCCTCCATGGTTTTGGCAGGTCCCTGTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: PELVASLASLLHGFGRSLLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...CAGGGACCTGCCAAAACCATGGAGGAGGCTAGCAAGCGAAGCTACCAGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAAGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: SVCVLHHESVDDILLGVEAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: SLQSASVGLGTDANTCRCSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...GCACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: KRGLGVNVVERISSFETLRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCTGGTTCTGGGGAAGGTaGGCCAGGCCATCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSWFWGR*ARPSEG
Trigger: GCCTTCTGATGGCCTGGCCCACCTTCCCCAGAACCA...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGTGGCGCCTCCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKVAPPF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGGAGGCGCCAC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR CCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAATCCAGTGTCATTGGCTaGACTCAAACCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWESSVIG*TQTSCP
Trigger: TGGACAGCTGGTTTGAGTCCAGCCAATGACACTGGA...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCAATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: GQQREGIFKGSTRGNKDPMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...TGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR TCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAACCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQEPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELALWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: ESVDDILLGVEPVLHLLLLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...CAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: TSPFAFSTTKVSMIFSWGCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQESHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: SVCVLHHESVDDILLGVEPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPSPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACTCCTGCTCCCTCCCCTaGTCTAACATCTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDSCSLP*SNIWFP
Trigger: GGGGAACCAGATGTTAGATCAGGGGAGGGAGCAGGA...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCAGGTGGGTAGGCACTaGCGGGAGGGACACTCCTGC +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNQVGRH*REGHSC
Trigger: GCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCCAAGACAAAAAGGTaGAGCTCCCCCGTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCAKTKR*SSPVPV
Trigger: AACAGGGACGGGGGAGCTTCACCTTTTTGTCTTGGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGTTGAGCCCAGGAGGTTaGGGCTGCGGTCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKLSPGG*GCGQPC
Trigger: ACATGGCTGACCGCAGCCTCAACCTCCTGGGCTCAA...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATTCGCAATCGCTGCAGTaGTCATGGCCGTTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNSQSLQ*SWPFPF
Trigger: GAACGGGAACGGCCATGAGCACTGCAGCGATTGCGA...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACACATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACAGGAAGACAGTTTTACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TGRQFYLQVPTGFGSTTPFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...CGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTAAAACTGTCTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR GCA 90 bp CCCACACTCAACCTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAAATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: PTLNLHTRVHTSIRPPREIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...TTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAGGTTGAGTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp TGTATTTCCTGGATCCTCTCTGCTGGCAAAGAGTTCATCTGTAGTCCTGGCTACAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: CISWILSAGKEFICSPGYKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...GTAGCCAGGACTACAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGTDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: REGIFKGSTRGNKDPDCGSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...GCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR GCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESILVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTTGCTTTGTCTCAGAATaGAGGCAGGTCTGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMACFVSE*RQVWPC
Trigger: GCAGGGCCAGACCTGCCTGCATTCTGAGACAAAGCA...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCTGCGGACCGTCCATTaGTTTGTCTCAGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLLRTVH*FVSECR
Trigger: CCTGCATTCTGAGACAAAGCAATGGACGGTCCGCAG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGATCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAESINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGTATTTCCTGGATCCTCTCTGCTGGCAAAGAGTTCATCTGTAGTCCTGGCTACGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: CISWILSAGKEFICSPGYAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...GTAGCCAGGACTACAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGCCTGCAACAAGCCCCTaGTGGCCTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLPATSP*WPVESG
Trigger: GCCACTTTCTACAGGCCAGCAGGGGCTTGTTGCAGG...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELALGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCTGGGGCCTGCAATTTaGAGCGCAGGAACAATGGGA +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQLGPAI*SAGTMG
Trigger: TCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAGGGCTTGAGGCACTGTaGAACTGTTGTCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKGLEAL*NCCLWG
Trigger: GCCCCACAGACAACAGTTGCACAGTGCCTCAAGCCC...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAGATGCTGGGGCCTTTaGCAGGAGATCTGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQRCWGL*QEICFF
Trigger: GAAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAGCAGAGTACTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLRRCSRLAGPPSFCSRVLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...TACTCTGCTGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCATTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: GMALMNPTNFRLETTRTPFLDPL*WQRVHL
Trigger: CAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585561.5
ENST00000676753.1
CDS-3UTR GCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGATTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRFLDPL*WQRVHL
Trigger: CAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR CCA 90 bp TGTATTTCCTGGATCCTCTCTGCTGGCAAAGAGTTCATCTGTAGTCCTGGCTACTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: CISWILSAGKEFICSPGYWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...GTAGCCAGGACTACAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585561.5
ENST00000676753.1
CDS-3UTR CCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590114.6
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCCCCTGTGGCACTGGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VPCGTGGGRAKKVSCQKRSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...CCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCCAGTGCCACAGGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASIAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCAGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: GMALMNPTNFRLETTRTPDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTAACAAGGACCCAGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: GQQREGIFKGSTRGNKDPDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...TGGGTCCTTGTTACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTCTCGGATCAGAACTaGAGCAACCCTCTTGGAACG +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLSDQN*SNPLGT
Trigger: CGTTCCAAGAGGGTTGCTCCAGTTCTGATCCGAGAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: TSPFAFSTTKVSMIFSWGSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LTWEGLIGDDLRATVWLCSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...ACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTGTCTTGGGAGTCTCTaGCAGTCGGTAGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRCLGSL*QSVELH
Trigger: ATGAAGCTCTACCGACTGCCAGAGACTCCCAAGACA...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QRALVVPPRQCKLLGRCPELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...AGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCATACCTGGTGAGGAGCTaGTGCACTACTGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPYLVRS*CTTGMS
Trigger: GGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTA...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ESVDDILLGVEPVLHLLLETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...CAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: LHHESVDDILLGVEPVLHSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...GTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGATGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: EIGMCGETSPIQASIRSGWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PSRGKASLEMIFVLLCGSWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...AGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: HRNIKQSPRSRPPGFSEGKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...TCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HESVDDILLGVEPVLHLLGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELALSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACTGAGCCTGGCCTCCTaGCTAAGGCTTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLLSLAS*LRLHSC
Trigger: ACAGGAATGAAGCCTTAGCCAGGAGGCCAGGCTCAG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGCAACAAGCCCCTGCTaGCCTGTAGAAAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSATSPC*PVESGF
Trigger: GAAGCCACTTTCTACAGGCCAGCAGGGGCTTGTTGC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KRGLGVNVVERISSFETLAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGCAGCGCAGGAACAATaGGAAAAGGGAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKAAQEQ*EKGGPC
Trigger: GCAGGGCCCTCCCTTTTCCCATTGTTCCTGCGCTGC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VKLLQVPGEELVHYWNVLCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...AAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCTGCAACTGTTGTCTGTaGGGCTGCAAAGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSCNCCL*GCKASP
Trigger: GGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCA...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCTTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: RTSLQSASVGLGTDANTCFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...GCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGCAAACCCTGCACACCTaGGCAGAGTTCTCACCGCAA +
Preference number: 4 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQQTLHT*AEFSPQ
Trigger: TTGCGGTGAGAACTCTGCCCAGGTGTGCAGGGTTTG...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEAVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTCACCCGGGGCAGCACTaGCCTCTGGCAGTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREAHPGQH*PLAVGR
Trigger: TCTACCGACTGCCAGAGGCCAGTGCTGCCCCGGGTG...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTATTCAGGCTCCTTGGTaGCGCCTCCATTTTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVIQAPW*RLHFGE
Trigger: CTCGCCAAAATGGAGGCGCCACCAAGGAGCCTGAAT...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000678576.1
3UTR CAA 72 bp AGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATG +
Preference number: 4 (lower is better)
Translates to: SFLESRSKRQSR*LGPAICSAGTM
Trigger: CATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp TCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAAGGTCTGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SRFPQGRKDLGT*SFDILKGLDRV
Trigger: CACCCTGTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp CTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACCACAGGGACTCCCCTA +
Preference number: 4 (lower is better)
Translates to: LWALRLVKCWSS*GKEFRTTGTPL
Trigger: TAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGATTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAAACCAATTTCCGACTTaGGACCACTCGAACCCCACA +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRNQFPT*DHSNPT
Trigger: TGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTT...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CFKYLVRSWCTTGMSFVSPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...GGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGGGTTGGATGGTTCATaGTGGTGGAGGGCAGCGTAT +
Preference number: 4 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPGLDGS*WWRAAY
Trigger: ATACGCTGCCCTCCACCATCATGAACCATCCAACCC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCAAGGGCGTCGCTCATaGGGTCTAGAAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKQGRRS*GLEEGS
Trigger: AGACCCCTCTTCTAGACCTCATGAGCGACGCCCTTG...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTCTCTGGAGGAAACCATaGACTGTGCCAACGCGTCTG +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITLWRKP*TVPTRL
Trigger: CAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAG...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESILFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTIGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAGCCACTCTGGGGCTTaGGGCACTGTGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKSHSGA*GTVQLL
Trigger: CAACAGTTGCACAGTGCCTCAAGCCCCAGAGTGGCT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: LASWLRLHSCMSGEVTAATSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAGTTACCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLVTFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGGTAAC...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCATTCTCGCAATCGCTaGAGTGCTCATGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSHSRNR*SAHGRS
Trigger: GGAACGGCCATGAGCACTGCAGCGATTGCGAGAATG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGGTTTAGGGACCGATaGCAATACCTGCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNGFRDR*QYLQVP
Trigger: TGGCACCTGCAGGTATTGGCATCGGTCCCTAAACCC...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RTGATLLERSFLWTHRKLSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTGGTGAGGAGCTGGTaGACTACTGGAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPLVRSW*TTGMSF
Trigger: AAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAG...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGCCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGT +
Preference number: 4 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQPSLPP*WGISNC
Trigger: ACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGG...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCAGTCCAACCTTCTCTaGCCCCATGCTGGGGCATTT +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSQSNLL*PHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGCAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTCAATCAATGAGGTCTaGTTCTGCGGACCGTCCATT +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRSINEV*FCGPSI
Trigger: AATGGACGGTCCGCAGAAGCAGACCTCATTGATTGA...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGGGCCTCTTCAAACTaGATCATCCCAGGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMRASSN*IIPGSG
Trigger: TCCACTGCCTGGGATGATGCAGTTTGAAGAGGCCCT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMAPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGACCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTTGCAAAGCAAGCCCCTaGCTCTCCGACTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VNVVERISSFETLVGWMVCKASP*LSDSSH
Trigger: GTGGGAGGAGTCGGAGAGGCAGGGGCTTGCTTTGCA...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: FTSISFRGFRDRCQYLQVESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...CACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKRELRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTGGCTCCAGTGTCATTaGCTGGACTCAAACCACCCC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITWLQCH*LDSNHP
Trigger: GGGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESILDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ESVDDILLGVEPVLHLLLLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...CAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACACTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LHHESVDDILLGVEPVLHELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...GTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: SELEQPSWNAASCGHTGSETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTCCACGGTTCCCTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: FHGSLTWEGLIGDDLRATALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...AGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAGGGAACCGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCATGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GMALMNPTNFRLETTRTPWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGATGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACGAATGCAGGCAGGTCTaGCCCTGCAGGAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHECRQV*PCRKVP
Trigger: AGGGACTTTCCTGCAGGGCCAGACCTGCCTGCATTC...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTCATGATAAGGGGTCTGGGTATTaGCCCCACGCCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VVERISSFETLVGWMVHDKGSGY*PHATPA
Trigger: GGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTT...ATCATGAACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGTCAGTCACGATTGCTaGGGCCTGCAATTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDVSHDC*GLQFAA
Trigger: CGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGAC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: HDGRKVKLLQVPGEELVHLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...GTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTGACTCCTCCCACCTGTaGAATGCAGTGCGCATCTTG +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITDSSHL*NAVRIL
Trigger: CAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTC...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATTCCAGAACAGCCACTaGGGCCTCACCGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLFQNSH*GLTVSI
Trigger: AATGGAAACGGTGAGGCCCCAGTGGCTGTTCTGGAA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGGTTTGAGACAGCCATaGCGCTACCACACTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KRGLGVNVVERISSFETLGLRQP*RYHTAG
Trigger: CCCTGCAGTGTGGTAGCGCCATGGCTGTCTCAAACC...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: FTSISFRGFRDRCQYLQVTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...CACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGTTAGACAGGAGTTGTaGGGAAGGCCTGACATTTTC +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIVRQEL*GRPDIF
Trigger: GAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAAC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LRWENFTSISFRGFRDRCNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...GCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: WNVLCFHWSQPSCLGSLWNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...CCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: ASSEIGMCGETSPIQASIFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: RTGATLLERSFLWTHRKLVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATAGGCTGCCTCACAGGTaGGTAGGCACTGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNRLPHR*VGTDGR
Trigger: CCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCT...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGCTGAAGACTATGGGCTaGTTCGCTTTTCCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELLKTMG*FAFPVG
Trigger: TCCTACTGGAAAAGCGAACCAGCCCATAGTCTTCAG...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGCAGAGGACAGCACTaGGATCCAACTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFSRGQH*DPTLPS
Trigger: AGATGGAAGAGTTGGATCCCAGTGCTGTCCTCTGCT...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
3UTR CAA 72 bp TCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVAKSRSASNHF*LPLAGCILERG
Trigger: GCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATCTGGACTTGGCAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp CAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACTGGCAGCACTGACAAC +
Preference number: 4 (lower is better)
Translates to: QNAYIDSHVTRG*ITFWETGSTDN
Trigger: GTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp CTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTaGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTC +
Preference number: 4 (lower is better)
Translates to: LHAVVQGLWALR*VKCWSSLGKEF
Trigger: GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKRSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VKLLQVPGEELVHYWNVLPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...AAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: WNVLCFHWSQPSCLGSLWPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...CCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCCACGTGCTATCCCATaGGATCTGAGCCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSPRAIP*DLSLFH
Trigger: ATGGAACAGGCTCAGATCTCATGGGATAGCACGTGG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGAAAGGACTCAATCAATaGGGTCTGCTTCTGCGGACC +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLKGLNQ*GLLLRT
Trigger: GGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAAATCAGTTGGCAGGATaGCTTCCTACAGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQENQLAG*LPTGSR
Trigger: CCTGCTCCCTGTAGGAAGTCATCCTGCCAACTGATT...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLALFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATGGAAACTGGCAGCACTaGCAACCATCACTACCACAA +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNGNWQH*QPSLPQ
Trigger: TTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCC...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAAGTCCCAGAAGGGGTTaGATGAAGAACGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQESPRRG*MKNAGT
Trigger: AGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACT...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTTCCTTTGCTTGGTTTaGGACAGCCATGGCGCTACC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITFLCLV*DSHGAT
Trigger: GGTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAA...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGGTAAAGGTCGTCTTTaGAACATGGCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLGKGRL*NMAAGR
Trigger: CCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACC...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: IHLSGVAGSSSSLQSGQHTSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...ATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAATAGGTGTTCTCTaGGCCTTTCAACAGATGGCA +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELRIGVL*AFQQMA
Trigger: TGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCT...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp CTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCTGTCTTTTAGGGTACTaGGAGCAGTTTCATCACCTA +
Preference number: 4 (lower is better)
Translates to: LRWENFTSISFRGFRDRCCLLGY*EQFHHL
Trigger: TAGGTGATGAAACTGCTCTCAGTACCCTAAAAGACA...GCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SLSTDGREASPGTDSEELFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAAACTGCTTGGAAGATaGCCTCCAGGTGAACCCGCC +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKKLLGR*PPGEPA
Trigger: GGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGCCAATACCTGCAGGTaGCAACGGGCTTTGGTAGTA +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNANTCR*QRALVV
Trigger: TACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGC...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAACAGTTCTGCTCCCTTTaGCAGGGATTCTCACGTGTG +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKQFCSL*QGFSRV
Trigger: CACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTG...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGCCAGGGACATCAGGGTaGTGGCTCTTTGCTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLPGTSG*WLFALR
Trigger: TCTTAGAGCAAAGAGCCAGCACCCTGATGTCCCTGG...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESILLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAACCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGCACACCACACGTCATaGTACCTCCTTCCCACCACT +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLAHHTS*YLLPTT
Trigger: AGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGC...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCACTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: STETELTPEIRTAQISEALRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSLLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAACTCCTTCTCCTAGAGTaGAGCTCCATGCAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQELLLLE*SSMQLS
Trigger: GGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCCC +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVFLDPL*WQRVHP
Trigger: GGGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587670.2
CDS-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACTCCAGTGTCATTGGCTaGACTCAAACCACCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDSSVIG*TQTTPV
Trigger: AACCGGGGTGGTTTGAGTCCAGCCAATGACACTGGA...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CCA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VGRMTSYREQAKGMEERTSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAACTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQELRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: RTSLQSASVGLGTDANTCDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCTGGAGCAACCCTCTTaGAACGCAGCTTCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNLEQPS*NAASCG
Trigger: TCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGTCCTTTGTTTCCATTaGTCGCAGCCCAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSVLCFH*SQPSCL
Trigger: AAGACAGCTGGGCTGCGACCAATGGAAACAAAGGAC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQEALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGCAAACCCTTTCATTTTaGCGAGGACAAGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLQTLSF*RGQGRR
Trigger: GCGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTG...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: CFKYLVRSWCTTGMSFVSSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...GGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCTGTCTCCTCAACCGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: SKVQLEVTRTQTAAVSSTGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...GGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CCA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: VTIAGACNLQRRNNGKREKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HESVDDILLGVEPVLHLLAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGCTCAAGCTGGGACCTaGCCCAGAACAGATCAAGAC +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLAQAGT*PRTDQD
Trigger: GTCTTGATCTGTTCTGGGCCAGGTCCCAGCTTGAGC...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGGTCCTTCCTTTGCTTaGTTTGAGACAGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDGPSFA*FETAMA
Trigger: CGCCATGGCTGTCTCAAACCAAGCAAAGGAAGGACC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp GAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGAATGCCTACATCGACA +
Preference number: 4 (lower is better)
Translates to: EVQFHSPILPGH*AEHHSRMPTST
Trigger: TGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAATTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATGGTGAACCCGCCTGGTaGTCTCTCGGATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNGEPAW*SLGSEL
Trigger: CAGTTCTGATCCGAGAGATCACCAGGCGGGTTCACC...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAAGATGCCCTCCAGGTaGACCCGCCTGGTGATCTCT +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREAKMPSR*TRLVIS
Trigger: AGAGATCACCAGGCGGGTTCACCTGGAGGGCATCTT...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR TCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCATGACGGGCGTAAGGTaGAATTGCTTCAAGTACCTG +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCMTGVR*NCFKYL
Trigger: CAGGTACTTGAAGCAATTTCACCTTACGCCCGTCAT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTCCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: IKAQEICHLSVCVLHHESPRKCR*YSPGGR
Trigger: TCTACCCCCAGGAGAATATCATCGACACTTTCGTGG...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAACCCCTATGCCAAACTTaGGCTTCTCCAGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQEPLCQT*ASPGRF
Trigger: AAACCTTCCTGGAGAAGCTCAAGTTTGGCATAGGGG...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTCCAGAATCGCACTGGTaGCTGGTTATTGTAGCACCA +
Preference number: 4 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSPESHW*LVIVAP
Trigger: TGGTGCTACAATAACCAGTCACCAGTGCGATTCTGG...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR TCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTCTCGGGTCCTCATTCTaGGGAATGATCTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: IKAQEICHLSVCVLHHESLGSSF*GMIWIQ
Trigger: CTGAATCCAGATCATTCCTCAGAATGAGGACCCGAG...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAACTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAAAAGTCCAGGAAATCTaGAGACTATGGGCTGGTTCG +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTKVQEI*RLWAGS
Trigger: CGAACCAGCCCATAGTCTTCAGATTTCCTGGACTTT...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: RTSLQSASVGLGTDANTCAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...GCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMASFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGAAACCATGAACTGTaGCAACGCGTCTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLGNHEL*QRVCLP
Trigger: TGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCC...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCATATTTCTGCTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGCCAAGAGCTCCACGTaGTATCCCATGAGATCTGAG +
Preference number: 4 (lower is better)
Translates to: SYFCSGGRTSLQSASVGLAKSST*YPMRSE
Trigger: CTCAGATCTCATGGGATAGCACGTGGAGCTCTTGGC...TAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACAATGAGGTCTGCTTCTaGGGACCGTCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDNEVCF*GPSIAL
Trigger: CAAAGCAATGGACGGTCCGCAGAAGCAGACCTCATT...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR GCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACCTCCCACCTGTGGAATaGAGTGCGCATCTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHLPPVE*SAHLAK
Trigger: CTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: FLESRSKRQSRLLGPAICLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGACATGGCACCTGCCTaGCAGCCAGTCAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSDMAPA*QPVSIF
Trigger: AAAAATACTGACTGGCTGGCAGGCAGGTGCCATGTC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGCCTTCTGTATTTCCTaGATCCTCTCTGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSAFCIS*ILSAGK
Trigger: TTTGCCAGCAGAGAGGATCCAGGAAATACAGAAGGC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCCTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGACTGAGAACAGCTCAATaGCCTTCTGTATTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRLRTAQ*PSVFPG
Trigger: TCCAGGAAATACAGAAGGCCATTGAGCTGTTCTCAG...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTCCTCCTCCATGGTTTTaGCAGGTCCCTGACCCACTG +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREAPPPWF*QVPDPL
Trigger: CAGTGGGTCAGGGACCTGCCAAAACCATGGAGGAGG...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACATCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NRCSLSLSTDGREASPGTSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: IKAQEICHLSVCVLHHESVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGTCGGTAGAGCTTCATaGTGCGCTGCATGGTCATAT +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDVGRAS*CAAWSY
Trigger: ATATGACCATGCAGCGCACCATGAAGCTCTACCGAC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATTTTTGCCCGGTCACTTaGCTGAACACCACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNFCPVT*LNTTPE
Trigger: TTCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAA...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: MSPLEETMNCANASVCHCDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SALSLHTDWSPWSNAESIAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGTTCCATTCCATGACCTaGGTCAACCGAAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMFHSMT*VNRNRA
Trigger: AGCTCTGTTTCGGTTGACCCAGGTCATGGAATGGAA...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMAERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAATCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAATGCTGGTCGTCTTTaGGGAAAGAATTCAGGACCA +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGNAGRL*GKNSGP
Trigger: TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGTTGTCCAAGGCCTTTaGGCCCTTAGGTTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMVVQGL*ALRLVK
Trigger: TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAAC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGTGGCTCCAGTGTCATTaGCTGGACTCAAACCAGCTG +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKWLQCH*LDSNQL
Trigger: CAGCTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTCTGGACTCAAACCACTaGTACACCATATTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGLDSNH*YTIFQS
Trigger: ACTCTGAAATATGGTGTACCAGTGGTTTGAGTCCAG...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTTGGCTCCAGTGTCATTaGCTGGACTCAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLWLQCH*LDSNHW
Trigger: CCAGTGGTTTGAGTCCAGCCAATGACACTGGAGCCA...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS-3UTR TCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTTTCATCTTCACAGGCTaGTCCTGGGCTGAATCTGTC +
Preference number: 4 (lower is better)
Translates to: KRGLGVNVVERISSFETLFIFTG*SWAESV
Trigger: GACAGATTCAGCCCAGGATCAGCCTGTGAAGATGAA...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590114.6
ENST00000678332.1
CDS-3UTR TCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGGTCCCTGACCCACTaGGAACAGCTCAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREARSLTH*EQLNGL
Trigger: AAGGCCATTGAGCTGTTCTCAGTGGGTCAGGGACCT...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTGTTTTGGCAGGTCCCTaGCCCACTGAGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREAVLAGP*PTENSS
Trigger: TGAGCTGTTCTCAGTGGGTCAGGGACCTGCCAAAAC...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACGTCTCCAAAGGTCCCTaGTGTTACAAGGAGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHVSKGP*CYKEVQ
Trigger: TTGGACCTCCTTGTAACATCAGGGACCTTTGGAGAC...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAGGGCACTTTGTCCTTTaGTATCCTCAAAGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKGHFVL*YPQRSG
Trigger: TCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCC...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTACCGTTTCCATTCCATaGCCTGGGTCAACCGAAACA +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLTVSIP*PGSTET
Trigger: TGTTTCGGTTGACCCAGGTCATGGAATGGAAACGGT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTCCAGAAGGGGTTGAATaGAGAACGCAGGGACTACTG +
Preference number: 4 (lower is better)
Translates to: VNVVERISSFETLVGWMVPEGVE*RTQGLL
Trigger: CAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGG...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR TCA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGTSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGTTCCTGGATCCTCTCTaGTGGCAAAGAGTTCATCTT +
Preference number: 4 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGFLDPL*WQRVHL
Trigger: AAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAA...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTCCCGGCAGTGTAAACTaGTTGGAAGATGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREAPGSVN*LEDALQ
Trigger: CTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTACCGATGCCAATACCTaGAGGTGCCAACGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREATDANT*RCQRAL
Trigger: CAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LHPSLEVQFHSPILPGHLSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...CAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: KSSGNLSPLRLRSPPRKCLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...ACACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTAACACCACTCCAGAATaGCTACATCGACAGCCATGT +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITNTTPE*LHRQPC
Trigger: ACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTT...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACAACGTCAGTCACGATTaGTGGGGCCTGCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHNVSHD*WGLQFA
Trigger: TGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTCTGGATCCTCTCTGCTaGCAAAGAGTTCATCTTCAC +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITLDPLC*QRVHLH
Trigger: GTGAAGATGAACTCTTTGCCAGCAGAGAGGATCCAG...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGATATGGATGTTTGCTaGGATGGCGCTAATGAACCC +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSDMDVC*DGANEP
Trigger: GGGTTCATTAGCGCCATCCCAGCAAACATCCATATC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAATCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQESWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTGAGACTCTTGTGGGTTaGATGGTTCATGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITETLVG*MVHDGG
Trigger: TCCACCATCATGAACCATCCAACCCACAAGAGTCTC...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCAGCAGGCCAAGGGGATaGAAGAAAGGACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSSRPRG*KKGLNQ
Trigger: TTGATTGAGTCCTTTCTTCCATCCCCTTGGCCTGCT...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGGGCACAACAAGAAATaGCTAATGGGTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSGHNKK*LMGWKA
Trigger: TGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGTCCCTACACACAGACTaGAGTCCGTGGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKSLHTD*SPWSNA
Trigger: TGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGAGAAATAGGCATGTGTaGGGAAACGAGCCCTATACA +
Preference number: 4 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQRNRHV*GNEPYT
Trigger: TGTATAGGGCTCGTTTCCCCACACATGCCTATTTCT...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAAAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SVCVLHHESVDDILLGVERLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTTTGGGCCCTTAGGTTaGTTAAATGCTGGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNFGPLG*LNAGRL
Trigger: AAGACGACCAGCATTTAACCAACCTAAGGGCCCAAA...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
3UTR CAA 72 bp TCAGACTCAGACAATGGAGATGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCTCTAATCACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SDSDNGDGKPLL*PSPDLPLITSC
Trigger: GCAAGAAGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGGCTGATCCTGGGCTaGATCTGTCTCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREARLILG*ICLTAF
Trigger: AAAGGCAGTGAGACAGATTCAGCCCAGGATCAGCCT...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKTSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGCCAACTCTTCCATCTTaGAGTAATACCAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NLLCPHAGAFPIVKVILQPTLPS*SNTSGE
Trigger: TTCTCCACTGGTATTACTTCAAGATGGAAGAGTTGG...CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLAIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGCATGGTCATATTTCTaGTCAGGTGGGAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDAWSYF*SGGRTS
Trigger: TGAAGTTCTCCCACCTGAGCAGAAATATGACCATGC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLSFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: IKAQEICHLSVCVLHHESLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: HFLLPLAGCILERGTTRNPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAACCTCTAATCACTTCTTaGTACCACTTGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQEPLITS*YHLQAV
Trigger: TACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGG...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTGGAAACCACTTCTGTTaGCAAGTCCAGATCTGCCTC +
Preference number: 4 (lower is better)
Translates to: VNVVERISSFETLVGWMVGNHFC*QVQICL
Trigger: GAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCC...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: TSKPGSTISQPNFARSLGIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: LSTDGREASPGTDSEELRIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: TLLERSFLWTHRKLISTIIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTTCATGGTGCGCTGCATaGTCATATTTCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLSWCAA*SYFCSG
Trigger: ACCTGAGCAGAAATATGACCATGCAGCGCACCATGA...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACGAGCTGGTGCACTACTaGAATGTCCTTTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDELVHY*NVLCFH
Trigger: ATGGAAACAAAGGACATTCCAGTAGTGCACCAGCTC...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGCTTTGAGACTCTTGTaGGTTGGATGGTTCATGATG +
Preference number: 4 (lower is better)
Translates to: PKHTMSSGFGNSAELASDALRLL*VGWFMM
Trigger: CATCATGAACCATCCAACCCACAAGAGTCTCAAAGC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCTGGGGTTCCATTTCCTaGTTCGAATTTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSWGSIS*FEFSVA
Trigger: AGCCACTGAAAATTCGAACCAGGAAATGGAACCCCA...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACCTCAGACAATGGAGATaGGAAACCACTTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHLRQWR*ETTSVA
Trigger: GGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAG...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCATCAGACTCAGACAATaGAGATGGGAAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCIRLRQ*RWETTS
Trigger: AGAAGTGGTTTCCCATCTCCATTGTCTGAGTCTGAT...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: HPSLEVQFHSPILPGHLANYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCGCATACGATGTCTTCTaGTTTTGGAAACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAAYDVF*FWKLCR
Trigger: TCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGC...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCTTGGTCTCAGTTTCTTaGAGTCAAGGAGCAAACGTC +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSLVSVS*SQGANV
Trigger: GACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAA...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGACAGACTGGAGTCCGTaGTCAAATGCAGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKTDWSP*SNAESI
Trigger: GATTGACTCTGCATTTGACCACGGACTCCAGTCTGT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCCTCATTCTGAGGAATaGTCTGGATTCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSPHSEE*SGFSFS
Trigger: TGAAAAGCTGAATCCAGATCATTCCTCAGAATGAGG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCTATCCCATGAGATCTaGGCCTGTTCCATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNLSHEI*ACSIFP
Trigger: AGGGAAGATGGAACAGGCTCAGATCTCATGGGATAG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp AAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTAACGTCAATCCAAGTTaGTCCTATACATTCACCTCA +
Preference number: 4 (lower is better)
Translates to: KSSGNLSPLRLRSPPRKCNVNPS*SYTFTS
Trigger: TGAGGTGAATGTATAGGATCAACTTGGATTGACGTT...ACACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTCTCCATGAGATCCAGTaGATTGAACACATCAAACCC +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLLHEIQ*IEHIKP
Trigger: GGGTTTGATGTGTTCAATGCACTGGATCTCATGGAG...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp TCATATTTCTGCTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTACTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SYFCSGGRTSLQSASVGLLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...TAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCTTCTTGCTACCACTTaGAGGCTGTATCTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKLLATT*RLYLGK
Trigger: CTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAG...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VNVVERISSFETLVGWMVESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTTCTCTGCCCCCATGCTaGGGCATTTCCAATTGTAAA +
Preference number: 4 (lower is better)
Translates to: VNVVERISSFETLVGWMVSLPPC*GISNCK
Trigger: TTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGA...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTGGTTCGAATTTTCAGTaGCTTTATCCAGAATCGCAC +
Preference number: 4 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSGSNFQ*LYPESH
Trigger: GTGCGATTCTGGATAAAGCCACTGAAAATTCGAACC...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTCATCATCCCAGGCAGTaGAAAAGCAAAATCTCACAG +
Preference number: 4 (lower is better)
Translates to: KRGLGVNVVERISSFETLHHPRQ*KSKISQ
Trigger: CTGTGAGATTTTGCTTTTCCACTGCCTGGGATGATG...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGTTGCAGGCTGTATCTTaGAAAGGGGCACAACAAGAA +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKLQAVS*KGAQQE
Trigger: TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAA...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CCA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: PHPKHTMSSGFGNSAELADVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGACCATATTTCAGAGTTaGGATCTCCAAAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMTIFQS*DLQSRS
Trigger: AGATCTGCTTTGGAGATCCCAACTCTGAAATATGGT...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGAAGAATAAGCAGCTTTaGGACTCTTGTGGGTTGGAT +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKKNKQL*DSCGLD
Trigger: ATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCTCTTTGCTCTAAGATaGGCTAAGCAGGGCTTACAC +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNLFALR*AKQGLH
Trigger: GTGTAAGCCCTGCTTAGCTCATCTTAGAGCAAAGAG...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp GTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTCATGATTGCAGAATTAGCCTCTaGCAAACCACACCAAAACCC +
Preference number: 4 (lower is better)
Translates to: VVERISSFETLVGWMVHDCRISL*QTTPKP
Trigger: GGGTTTTGGTGTGGTTTGTCAGAGGCTAATTCTGCA...ATCATGAACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGCTTCATGGTGCGCTaGATGGTCATATTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREASFMVR*MVIFLL
Trigger: GAGCAGAAATATGACCATGCAGCGCACCATGAAGCT...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR GCA 90 bp GTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTCATGATGAGTCCGTGGTCAAATaGAGAGTCAATCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VVERISSFETLVGWMVHDESVVK*RVNPKA
Trigger: TGCCTTTGGATTGACTCTGCATTTGACCACGGACTC...ATCATGAACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTCTTAGGTTGGTTAAATaGTGGTCGTCTTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLLRLVK*WSSLGK
Trigger: TTTCCCCAAAGACGACCAGCATTTAACCAACCTAAG...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAAAGGTTGGCAACAACTaGCTAAAGAGCCCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKKVGNN*LKSPFK
Trigger: TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTT...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTAATTACATCCAAGCCTaGAAGTACAATTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPNYIQA*KYNFTA
Trigger: GGCTGTGAAATTGTACTTCCAGGCTTGGATGTAATT...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAGATGTCTTCTGGTTTTaGAAACTCTGCAGAATTAGC +
Preference number: 4 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKDVFWF*KLCRIS
Trigger: GCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATC...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCAAGGTAGGAAAGACTTaGGCACTTTGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSKVGKT*ALCPLI
Trigger: TATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTT...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATGAACGCAGGGACTACTaGGACAAAAATCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNERRDY*DKNQMS
Trigger: GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTC...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTAGGTTGGTTAAATGCTaGTCGTCTTTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLRLVKC*SSLGKE
Trigger: TTCTTTCCCCAAAGACGACCAGCATTTAACCAACCT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTATATTTCTGCTCAGGTaGGAGAACTTCACTTCAATC +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLIFLLR*ENFTSI
Trigger: GATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATAT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: ITSKPGSTISQPNFARSLTSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKTSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR TCA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACACAAGTGAGATGTATTaGGCAGAACAACAATGCATT +
Preference number: 4 (lower is better)
Translates to: LRFGKLAALTTITTTKIHTSEMY*AEQQCI
Trigger: AATGCATTGTTGTTCTGCTCAATACATCTCACTTGT...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR GCA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: VNVVERISSFETLVGWMVIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR GCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTATAGATATGGATGTTTaGTGGGATGGCGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREAIDMDV*WDGANE
Trigger: TTCATTAGCGCCATCCCAGCAAACATCCATATCTAT...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: KITENRCSLSLSTDGREASFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CCA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATTCTTTTTCTTCTTTTTaGCTCCAGTGTCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: LITFWETGSTDNHHYHKNSFSSF*LQCHWL
Trigger: CAGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGA...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCGTCCGCCATCTTGAGTaGCGAGAGCAGGGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATVRHLE*REQGSA
Trigger: CGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGAC...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592782.5
CDS GCA 90 bp AAGGACCCAGACTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTaGTGGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTGGC +
Preference number: 5 (lower is better)
Translates to: KDPDCGCLLNPWPGF*WRHGHPGPGSLDSG
Trigger: GCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 90 bp GGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTaGACTCTGGCTATGTGTCGCCTACCTTCTCTGCCCCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: GPVSAGDMDTLGRAA*TLAMCRLPSLPPCW
Trigger: CCAGCATGGGGGCAGAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 90 bp CTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATaGACACCCTGGGCCGGGCAGCCTGGACTCTGGCTATGTGTCGCC +
Preference number: 5 (lower is better)
Translates to: LRLSPQPMARFLLET*TPWAGQPGLWLCVA
Trigger: GGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 90 bp GACCCAGACTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTaGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: DPDCGCLLNPWPGFC*RHGHPGPGSLDSGY
Trigger: ATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS-3UTR CAA 90 bp TCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCCCCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SHVHQTSQGKLAHAPAHPRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...GGGGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CTGGGCCCGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGPGPPPVLWEQTHTQPALLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...GGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCGGGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGGGTGGCGCCTCCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGGGASI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGGAGGCGCCACC...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS TCA 90 bp GGACATTGGCTCAGGGCACTTGAGGACAGAGCCGTGATCGTGGGCTaGACCTGCCAGACCTCTTTCCCAGCATGGGCACCGCCAGGGACC +
Preference number: 5 (lower is better)
Translates to: GHWLRALEDRAVIVG*TCQTSFPAWAPPGT
Trigger: GGTCCCTGGCGGTGCCCATGCTGGGAAAGAGGTCTGGCAGGTTCAGCCCACGATCACGGCTCTGTCCTCAAGTGCCCTGAGCCAATGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS GCA 90 bp CTCATGGCCGTTCCCGTTCCCTTCCATCATCTGCGGCAGCGGAGGTaGCGGCGGCTTCACTGCTGTCTCACTCTCGTCCGCCATCTTGAG +
Preference number: 5 (lower is better)
Translates to: LMAVPVPFHHLRQRR*RRLHCCLTLVRHLE
Trigger: CTCAAGATGGCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAACGGGAACGGCCATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000258960.7
ENST00000543908.5
ENST00000587014.2
ENST00000587670.2
ENST00000590310.2
ENST00000591931.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000677949.1
ENST00000678332.1
ENST00000678576.1
ENST00000678606.1
CDS GCA 90 bp GTTCCCTTCCATCATCTGCGGCAGCGGAGGTGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGCCATCTTGAGTTGCGAGAGCAGGGC +
Preference number: 5 (lower is better)
Translates to: VPFHHLRQRRCRRLH*CLTLVRHLELREQG
Trigger: GCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAGATGATGGAAGGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000587014.2
ENST00000587670.2
ENST00000590310.2
ENST00000591931.2
ENST00000592782.5
ENST00000676828.1
ENST00000677949.1
ENST00000678606.1
CDS-3UTR CAA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CGGGTCCACCGCCTGTGCTGTGGGAGCAGACTCACACCCAGCCGGCCCCACACTTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: RVHRLCCGSRLTPSRPHTSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...AGTGTGGGGCCGGCTGGGTGTGAGTCTGCTCCCACAGCACAGGCGGTGGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS TCA 90 bp GTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCTaGAAGAAGAGCACAGCTGTGAGCCTCACCCTTTGCCCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: VLVRLHGAMGVHHFA*KKSTAVSLTLCPLG
Trigger: CCCGAGGGGGCAAAGGGTGAGGCTCACAGCTGTGCTCTTCTTTCAGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588455.5
CDS TCA 90 bp GGGAGGAGGAGGGACATTGGCTCAGGGCACTTGAGGACAGAGCCGTaGTCGTGGGCTGAACCTGCCAGACCTCTTTCCCAGCATGGGCAC +
Preference number: 5 (lower is better)
Translates to: GRRRDIGSGHLRTEP*SWAEPARPLSQHGH
Trigger: GTGCCCATGCTGGGAAAGAGGTCTGGCAGGTTCAGCCCACGATCACGGCTCTGTCCTCAAGTGCCCTGAGCCAATGTCCCTCCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS CCA 90 bp TCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTaGGCCGGGCAGCCTGGACTCTGGCTATGTGTCGCCTACCTTCTC +
Preference number: 5 (lower is better)
Translates to: SPQPMARFLLETWTP*AGQPGLWLCVAYLL
Trigger: GAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS-3UTR CAA 90 bp CGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RPLHAPHLAPAGTKCPPYTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...GTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLREMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TGCCACTGGGGGAGCCAGCCGGGTGGCCGGAGAGCCCACAAAAGAAACTCCGGGAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: CHWGSQPGGRRAHKRNSGKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...CCCGGAGTTTCTTTTGTGGGCTCTCCGGCCACCCGGCTGGCTCCCCCAGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS CCA 90 bp TTTCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTaGCTATGTGTCGCCTACCTTCTCTGCCCCCATGCTGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: FLLETWTPWAGQPGL*LCVAYLLCPHAGAF
Trigger: AAATGCCCCAGCATGGGGGCAGAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 90 bp GCTGGGAAAGCTGTGAGGAGAAGCCCTGTCCTCCCAGGGAAGGCCTaGCTATTCAGGCTCCTTGGTGGCGCCTCCATTTTGGCGAGGACA +
Preference number: 5 (lower is better)
Translates to: AGKAVRRSPVLPGKA*LFRLLGGASILART
Trigger: TGTCCTCGCCAAAATGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR CAA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGTTGGCTCCAGTGTCATaGGCTGGACTCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGLAPVS*AGLKPP
Trigger: GGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585561.5
ENST00000676753.1
CDS-3UTR CAA 90 bp TTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LSLSGSTGPWVFTTSPSLGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCCACACCAGGGTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LHTRVHTSIRPPRENWPTGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAACCCTGGTGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: ASWLRLHSCMSGEVTAARRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...CCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCTCTCCGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: PLRLLPPVECSAHLAKNSRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...GCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCGGAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: LHGAMGVHHFAQLGDGLRLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...ACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCCAGCTTGGGGATCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: PCQAPRGHGCSPLRPAWGSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...TCCCCAAGCTGGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: CGETSPIQASIRSGGLLLCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS CCA 90 bp GCTGGGAAAGCTGTGAGGAGAAGCCCTGTCCTCCCAGGGAAGGCCTaGCTATTCAGGCTCCTTGGTGGCGCCTCCTGTGAGAACGAAACT +
Preference number: 5 (lower is better)
Translates to: AGKAVRRSPVLPGKA*LFRLLGGASCENET
Trigger: AGTTTCGTTCTCACAGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp TGGACTCAAACCAGCTGTCCACTCTTGCCTCCCACAGCTTCCATCTaGCCGGGCCTCTCAGTGCCCCTGATGCAGAAAGACCCCGGTTGT +
Preference number: 5 (lower is better)
Translates to: WTQTSCPLLPPTASI*PGLSVPLMQKDPGC
Trigger: ACAACCGGGGTCTTTCTGCATCAGGGGCACTGAGAGGCCCGGCCAGATGGAAGCTGTGGGAGGCAAGAGTGGACAGCTGGTTTGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS-3UTR CAA 90 bp GGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GGGRAKKVSCQKRAAAQEWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCCTACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: PQPYPPGKPWATQLPRFPTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...AGGGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp TCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SPSPTLLANRGQLNFHGSGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...GGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCAAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: SSTASVGVVGLQARLHFARCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACGATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: TIAQVQSIPGEALGQGVGCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...CCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CCCAAAGACTCTCCCACACCCCCTATCCCTGAAGTTCCGAGTGGCTGGGCCCGGTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PKDSPTPPIPEVPSGWARCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...CCGGGCCCAGCCACTCGGAACTTCAGGGATAGGGGGTGTGGGAGAGTCTTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp ATCGCCCAGGTCCAAAGCATCCCAGGTGAAGCCCTGGGGCAGGGTGTAGGGCTCAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: IAQVQSIPGEALGQGVGLKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...GAGCCCTACACCCTGCCCCAGGGCTTCACCTGGGATGCTTTGGACCTGGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGTTCTTTTAGCCAGCTaGGGGACGGGCTGCGTATCC +
Preference number: 5 (lower is better)
Translates to: SMLPIWLLQAPSARLTRYVLLAS*GTGCVS
Trigger: GGATACGCAGCCCGTCCCCAAGCTGGCTAAAAGAAC...GTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp GGGGGAGGAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGCTCTCGTCCGCCATCTaGAGTTGCGAGAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GGGRAKKVSCQKRAAAQELSSAI*SCESRA
Trigger: AGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAG...CTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp TCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGGCCGGGCACGTGGGAAGGCCTCATaGGAGATGATCTTCGTGCTA +
Preference number: 5 (lower is better)
Translates to: SSTHGPVSAGDMDTLGRARGKAS*EMIFVL
Trigger: TAGCACGAAGATCATCTCCAATGAGGCCTTCCCACG...TGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS GCA 90 bp GTCCTGTGGGCAGCCACAAGAACAAGGTTCCCTCAGAAGCTCCGCTaGTTCCACGTTAATCCCCGCTCTCCGGGTGGTTCTCAGGACACT +
Preference number: 5 (lower is better)
Translates to: VLWAATRTRFPQKLR*FHVNPRSPGGSQDT
Trigger: AGTGTCCTGAGAACCACCCGGAGAGCGGGGATTAACGTGGAAGCAGCGGAGCTTCTGAGGGAACCTTGTTCTTGTGGCTGCCCACAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp TCCAATGACTCACCACGACAGACAGCAATCACCCCTTTCCCACGCTaGGAAAGCTGTGAGGAGAAGCCCTGTCCTCCCAGGGAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: SNDSPRQTAITPFPR*ESCEEKPCPPREGL
Trigger: CAGGCCTTCCCTGGGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGCGTGGGAAAGGGGTGATTGCTGTCTGTCGTGGTGAGTCATTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS-3UTR CAA 90 bp TCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATTTGGCTCCAGTGTCATaGGCTGGACTCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: SPCSPSGSCRHQVPALPDLAPVS*AGLKPP
Trigger: GGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...ATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACCAGATACGCCACAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: CSPSGSCRHQVPALPDTPQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...TGGCGTATCTGGTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CGETSPIQASIRSGGLLLGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...GAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATGGACACCCTGGAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: RLSPQPMARFLLETWTPWKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...CCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HTWAEFSPQHKAESEEPAGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: EALCNCCLWGCKASPCLSSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCAGCATTCCCACGGGAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: SGVAGSSSSLQSGQHSHGKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...CCCGTGGGAATGCTGCCCGCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGGTGGCTGAAGGGGTCTGGGTATTGGCCCCACGCCACTCCTGCCTAGCCACCAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: LVAEGVWVLAPRHSCLATKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...GGTGGCTAGGCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTCAGCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSECSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCTCAACAGCCTCCGTAGGTGTAGTCGGCTTGCAGGCCCGCCTTCATTTTGCACTCTCGTCCGCCATCTaGAGTTGCGAGAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SSTASVGVVGLQARLHFALSSAI*SCESRA
Trigger: AGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAG...TGCAAAATGAAGGCGGGCCTGCAAGCCGACTACACCTACGGAGGCTGTTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000592782.5
ENST00000676828.1
CDS CCA 90 bp CATCAAACCCTTTCACGACAGACAGCAATCACCCCTTTCCCACGCTaGGAAAGCTGTGAGGAGAAGCCCTGTCCTCCCAGGGAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: HQTLSRQTAITPFPR*ESCEEKPCPPREGL
Trigger: CAGGCCTTCCCTGGGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGCGTGGGAAAGGGGTGATTGCTGTCTGTCGTGAAAGGGTTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS-3UTR CAA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585561.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PPRQCKLLGRCPPGEPAWLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...CCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACTTGGCTGAACACCACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TWLNTTPECLHRQPCDQRRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...CCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGTGGTGTTCAGCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCAAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GMALMNPTNFRLETTRTPRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCACGTGGGAAGGCCTCATTGGAGATGATCTTCGTGCTACTGTGTGGCTCTGTAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: LTWEGLIGDDLRATVWLCRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...ACAGAGCCACACAGTAGCACGAAGATCATCTCCAATGAGGCCTTCCCACGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ILLGVEPVLHLLLAHDGRCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...ACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AGGACCCAGACTGCGGCTGTCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: RTQTAAVSSTHGPVSAGDGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...GTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGACAGCCGCAGTCTGGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CAGGCCATCAGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: QAIRRLPHRWVGTDGRDTAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...AGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCTGATGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCCCAGCCCTACCCTCCTGGCAAACCGTGGGCAACTCAACTTCCACGGTTCCGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: SPSPTLLANRGQLNFHGSAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...GGAACCGTGGAAGTTGAGTTGCCCACGGTTTGCCAGGAGGGTAGGGCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp GTTCACACGTCCATCAGACCTCCCAGGGAAAACTGGCCCACGCTCCAGCTCACCTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: VHTSIRPPRENWPTLQLTSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...GGTGAGCTGGAGCGTGGGCCAGTTTTCCCTGGGAGGTCTGATGGACGTGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRREGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCACAGGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: MALMNPTNFRLETTRTPQEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...CTGTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGAAGGGGTCTGGGTATaGGCCCCACGCCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLEGVWV*APRHSC
Trigger: GCAGGAGTGGCGTGGGGCCAATACCCAGACCCCTTC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAGGCACTGTGCAACTGTTGTCTGTGGGGCTGCAAAGCAAGCCCCTGCCTCTCCGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: EALCNCCLWGCKASPCLSGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...GGAGAGGCAGGGGCTTGCTTTGCAGCCCCACAGACAACAGTTGCACAGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACCGATGCCAATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: TDANTCRCQRALVVPPRQILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATTGGCATCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGGCTCATGACGGGCGTAAGGTGCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: LGVEPVLHLLLAHDGRKVPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...CACCTTACGCCCGTCATGAGCCAGGAGGAGGTGGAGCACTGGTTCTACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGAAGGCTGCCTCACAGGTGGGTAGGCACTGACGGGAGGGACACTCCTGCTCCCAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: RRLPHRWVGTDGRDTPAPRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...GGGAGCAGGAGTGTCCCTCCCGTCAGTGCCTACCCACCTGTGAGGCAGCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGTCCGCCATCTTGAGTaGCGAGAGCAGGGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWVRHLE*REQGSA
Trigger: CGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGAC...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592782.5
ENST00000676828.1
CDS TCA 90 bp GGGTGCCTCTCTGGGAACGTGTTAGAGACCTGGAACACCACTCCCTaGCTCACCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GCLSGNVLETWNTTP*LTSTTKVSMIFSWG
Trigger: CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGGTGAGTCAGGGAGTGGTGTTCCAGGTCTCTAACACGTTCCCAGAGAGGCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS GCA 90 bp CAAAGCACTGACAGACGGGCTCGCCATCCGCTACTGGCAGTTGGATaGTCCAATGACTCACCACGACAGACAGCAATCACCCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: QSTDRRARHPLLAVG*SNDSPRQTAITPFP
Trigger: TGGGAAAGGGGTGATTGCTGTCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTCAGTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 90 bp TGGGCCGGGCAGCCTGGACTCTGGCTATGTGTCGCCTACCTTCTCTaGCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAG +
Preference number: 5 (lower is better)
Translates to: WAGQPGLWLCVAYLL*PHAGAFPIVKVILQ
Trigger: CTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: ASSEIGMCGETSPIQASIWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: NVLCFHWSQPSCLGSLWQWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp ACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: TSPFAFSTTKVSMIFSWGGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGAGAGGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGAGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGGAGATGCTGGGCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: IKQSPRSRPPGFSEGDAGQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...CCCAGCATCTCCCTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCAGGTGAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: FTSISFRGFRDRCQYLQVRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...CACCTGCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: HPGSVNCLEDALQVNPPGGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...ACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCAAGGAAACCCGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: WLRLHSCMSGEVTAARKPEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...GGGTTTCCTTGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: GCRAPGGYCPCQAPRGHGHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...CCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: STETELTPEIRTAQISEAAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCAGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: GMALMNPTNFRLETTRTPAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: YHPGSVNCLEDALQVNPPKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...AGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCCTCCTACTCAGCTCTCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: ETSPIQASIRSGGLLLSSLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...AGAGCTGAGTAGGAGGCCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTTCCCACCACTTGCGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: AARKPAHHTSCYLLPTTCAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...GCAAGTGGTGGGAAGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCAGGCCCAGGGAGGCCTTCCAACAGCAGTTGCTCGAGGACGGTTAGCGTGAAGAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: PGPGRPSNSSCSRTVSVKRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...CTTCACGCTAACCGTCCTCGAGCAACTGCTGTTGGAAGGCCTCCCTGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATTTGGCTCCAGTGTCATaGGCTGGACTCAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDLAPVS*AGLKPA
Trigger: AGCTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS CCA 90 bp AGAACCCACAGCAAAGCACTGACAGACGGGCTCGCCATCCGCTACTaGCAGTTGGATGCTCCAATGACTCACCACGACAGACAGCAATCA +
Preference number: 5 (lower is better)
Translates to: RTHSKALTDGLAIRY*QLDAPMTHHDRQQS
Trigger: TGATTGCTGTCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTCAGTGCTTTGCTGTGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp ACAGCCTCCTTCCTACCCCTTTGCTGCCATTTCAAAGCTGTCCTGTaGGCAGCCACAAGAACAAGGTTCCCTCAGAAGCTCCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TASFLPLCCHFKAVL*AATRTRFPQKLRCF
Trigger: GAAGCAGCGGAGCTTCTGAGGGAACCTTGTTCTTGTGGCTGCCCACAGGACAGCTTTGAAATGGCAGCAAAGGGGTAGGAAGGAGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS-3UTR CAA 90 bp CGCCCTCTCCATGCTCCCCATCTGGCTCCTGCAGGCACCAAGTGCCCGCCTTACTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: RPLHAPHLAPAGTKCPPYFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...GTAAGGCGGGCACTTGGTGCCTGCAGGAGCCAGATGGGGAGCATGGAGAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp GGGCAGGGTGTAGGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: GQGVGLLADIVLVRLHGAFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...GGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCCTACACCCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000585561.5
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGTGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: SLSTDGREASPGTDSEELWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCTGCTGGTCTGGCCAGCAGAGGGAGGGCATTTTCAAAGGTTCAACTCGAGGTACTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: PAGLASRGRAFSKVQLEVLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...TACCTCGAGTTGAACCTTTGAAAATGCCCTCCCTCTGCTGGCCAGACCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGACTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: EIGMCGETSPIQASIRSGLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: EIGMCGETSPIQASIRSGGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTGGCTCATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LLAHDGRKVKLLQVPGEEEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...CTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATGAGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACCACTTGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PGGYCPCQAPRGHGCSPLASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...AAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTTTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCGGCAGTGTAAACTGCTTGGAAGATGCCCTCCAGGTGAACCCGCCTGGTGATCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: PGSVNCLEDALQVNPPGDPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...ATCACCAGGCGGGTTCACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CATGGGTGTTCACCACTTCGCCCAGCTTGGGGACGGGCTGCGTATCCCAGAACTTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: HGCSPLRPAWGRAAYPRTWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...AGTTCTGGGATACGCAGCCCGTCCCCAAGCTGGGCGAAGTGGTGAACACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSELPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: GLLLSSLPTHRLESVVKCAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...GCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CGGAGAGGTGACGGCAGCAAGGAAACCCGCACACCACACGTCATGCTACCTCCTAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: RRGDGSKETRTPHVMLPPKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...AGGAGGTAGCATGACGTGTGGTGTGCGGGTTTCCTTGCTGCCGTCACCTCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACCTCTCGTCCGCCATCTaGAGTTGCGAGAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINLSSAI*SCESRA
Trigger: AGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAG...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000592782.5
ENST00000676828.1
CDS GCA 90 bp ATTCCTCTGAGAAGCTGGCTCTGGTCAGCTACATGGGGTTTGTGTTaGTTCCTTACTCCATGGATGCCCCAACTCTCAGGCCCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: IPLRSWLWSATWGLC*FLTPWMPQLSGPQC
Trigger: GCACTGAGGGCCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTCAGAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS-3UTR CAA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCATGGCGGATATTGTCCTaGTCAGGCTCCACGGGGCCA +
Preference number: 5 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPWRILS*SGSTGP
Trigger: TGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: CFKYLVRSWCTTGMSFVSGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...GGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGCAGTTGCTCGAGGACGGTTAGCGTGAAGGCCTCAGGGTCCTTCCTTTGCTTGTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SSCSRTVSVKASGSFLCLLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...CAAGCAAAGGAAGGACCCTGAGGCCTTCACGCTAACCGTCCTCGAGCAACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: STETELTPEIRTAQISEAGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTGGCACATGCTCCTCAACTACAGTGCAGACACCCGCATTTTTGGGGCCTTACAGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: VAHAPQLQCRHPHFWGLTGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...TGTAAGGCCCCAAAAATGCGGGTGTCTGCACTGTAGTTGAGGAGCATGTGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp AATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: NRCSLSLSTDGREASPGTRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...TGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATCGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: HFLLPLAGCILERGTTRNRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: QRALVVPPRQCKLLGRCPSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...AGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACACCTGGGCAGAGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: HTWAEFSPQHKAESEEPATSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...GGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACTCTGCCCAGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: EIGMCGETSPIQASIRSGGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: VTIAGACNLQRRNNGKREGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: VTIAGACNLQRRNNGKREKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: VGRMTSYREQAKGMEERTKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CGACTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: RLLPPVECSAHLAKNSSFLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...GAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTTGGCAGGATGACTTCCTACAGGGAGCAGGCCAAGGGGATGGAAGAAAGGACTCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: VGRMTSYREQAKGMEERTLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...AGTCCTTTCTTCCATCCCCTTGGCCTGCTCCCTGTAGGAAGTCATCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: HPSLEVQFHSPILPGHLACSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...AGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS CCA 90 bp TGGCTCTGGTCAGCTACATGGGGTTTGTGTTGCTTCCTTACTCCATaGATGCCCCAACTCTCAGGCCCTCAGTGCACCTCATGTTGTATG +
Preference number: 5 (lower is better)
Translates to: WLWSATWGLCCFLTP*MPQLSGPQCTSCCM
Trigger: CATACAACATGAGGTGCACTGAGGGCCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACACAAACCCCATGTAGCTGACCAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp AGTCCTCTCTGGAGTCCAAACCCTGAGCCCATTCCTCTGAGAAGCTaGCTCTGGTCAGCTACATGGGGTTTGTGTTGCTTCCTTACTCCA +
Preference number: 5 (lower is better)
Translates to: SPLWSPNPEPIPLRS*LWSATWGLCCFLTP
Trigger: TGGAGTAAGGAAGCAACACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTCAGAGGAATGGGCTCAGGGTTTGGACTCCAGAGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp CTTTCTGCAAAGCAGCAGGGACAAACAAGAACAGGTGAGGACAGGTaGGGACAGCCTCCTTCCTACCCCTTTGCTGCCATTTCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LSAKQQGQTRTGEDR*GQPPSYPFAAISKL
Trigger: CAGCTTTGAAATGGCAGCAAAGGGGTAGGAAGGAGGCTGTCCCCACCTGTCCTCACCTGTTCTTGTTTGTCCCTGCTGCTTTGCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp GTTTCTCTCACTCCACCTTCAGGCAGCTCTGCCCCTCTAGATAAATaGCTGGAAACTGCAACAGGACATGTGGGGAGGAGGAGGGACATT +
Preference number: 5 (lower is better)
Translates to: VSLTPPSGSSAPLDK*LETATGHVGRRRDI
Trigger: AATGTCCCTCCTCCTCCCCACATGTCCTGTTGCAGTTTCCAGCCATTTATCTAGAGGGGCAGAGCTGCCTGAAGGTGGAGTGAGAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS-3UTR CAA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTATTGGCTCCAGTGTCATaGGCTGGACTCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVLAPVS*AGLKPP
Trigger: GGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000590114.6
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CAA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGTTGGCTCCAGTGTCATaGGCTGGACTCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: SLSTDGREASPGTDSEELLAPVS*AGLKPP
Trigger: GGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp GGGCTCCTGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATGGGTGTTCACTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: GLLADIVLVRLHGAMGVHFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...GTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000585561.5
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: LGVKEQTSVTIAGACNLQQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...CTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCCTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: ASSEIGMCGETSPIQASIQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...GATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGAGGAAACCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: EGLRKCHARRGQQLRRGNQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...GTTTCCTCTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp GAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGATTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: EIGMCGETSPIQASIRSGLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...TCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SQGANVSHDCWGLQFAAQLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...CTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: FLESRSKRQSRLLGPAICTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SELEQPSWNAASCGHTGSGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...ACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000543908.5
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCATATTTCTGCTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTACGCAGCCCAGCTGTCTaGGGAGTCTCTGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SYFCSGGRTSLQSASVGLRSPAV*GVSGSR
Trigger: CCGACTGCCAGAGACTCCCAAGACAGCTGGGCTGCG...TAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AATACCTGCAGGTGCCAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: NTCRCQRALVVPPRQCKLGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...CAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCTGCAGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAATCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWESVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGATCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: KCWSSLGKEFRTTGTPLGGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...GCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGGCCTCCTGGCTAAGGCTTCATTCCTGTATGAGCGGAGAGGTGACGGCAGCACATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: LASWLRLHSCMSGEVTAAHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...TGCTGCCGTCACCTCTCCGCTCATACAGGAATGAAGCCTTAGCCAGGAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAGGGAGCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: VTIAGACNLQRRNNGKREPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...CTCCCTTTTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCCTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: RPPTQLSPYTQTGVRGQMPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...CATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: KSSGNLSPLRLRSPPRKCAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...ACACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTAGGCTTCTGAGACTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: VVFGERIQDHRDSPRLLRLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...TCTCAGAAGCCTAGGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTGAGAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: SHRNIKQSPRSRPPGFSEKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...CTCACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SQGTHPYKVGNNWLKSPFCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...AAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGTGCAGCTCCATGCAGTaGTCCAAGGCCTTTGGGCCC +
Preference number: 5 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMCSSMQ*SKAFGP
Trigger: GGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCA...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: FLESRSKRQSRLLGPAICVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CATTCCCACGGGTGGCACGGCCCCCATCCCAAGCATACGATGTCTTCTGGTTTTAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: HSHGWHGPHPKHTMSSGFRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...AAAACCAGAAGACATCGTATGCTTGGGATGGGGGCCGTGCCACCCGTGGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS TCA 90 bp TCAGTGTCCAGGCCGGGGCTCTTGCTATTCCTGGTTATGCCTCCCTaGAACTCTAGTAATTTCCACAGTCCTCTCTGGAGTCCAAACCCT +
Preference number: 5 (lower is better)
Translates to: SVSRPGLLLFLVMPP*NSSNFHSPLWSPNP
Trigger: AGGGTTTGGACTCCAGAGAGGACTGTGGAAATTACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCTGGACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 90 bp TGTTGCTTCCTTACTCCATGGATGCCCCAACTCTCAGGCCCTCAGTaGACCTCATGTTGTATGACACCTGCTGTGTTGCTTGGAGACTGT +
Preference number: 5 (lower is better)
Translates to: CCFLTPWMPQLSGPQ*TSCCMTPAVLLGDC
Trigger: ACAGTCTCCAAGCAACACAGCAGGTGTCATACAACATGAGGTGCACTGAGGGCCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 90 bp AATTCAAGCACCAACTCCCTGTTTTTAGGGAGGACCAAACACGGATaGTCAAGGAAGTCTAAGGTGCCAACACTCGAGCCCTGGGAACCC +
Preference number: 5 (lower is better)
Translates to: NSSTNSLFLGRTKHG*SRKSKVPTLEPWEP
Trigger: GGGTTCCCAGGGCTCGAGTGTTGGCACCTTAGACTTCCTTGACCATCCGTGTTTGGTCCTCCCTAAAAACAGGGAGTTGGTGCTTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS-3UTR CAA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: SLSTDGREASPGTDSEELQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp GCCATGTTCGTACTTCTGCACTCCAACCTGTCCATTCTGATGGGCACCATGCTTCAACCAATTTCCGACTaGAGACCACTCGAACCCCAC +
Preference number: 5 (lower is better)
Translates to: AMFVLLHSNLSILMGTMLQPISD*RPLEPH
Trigger: GTGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTG...AAGCATGGTGCCCATCAGAATGGACAGGTTGGAGTGCAGAAGTACGAACATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR CAA 90 bp CATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: HDGRKVKLLQVPGEELVHLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...GTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCAAAGGTTCAACTCGAGGTAACAAGGACCCAGACTGCGGCTGTCTCCTCAACCTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SKVQLEVTRTQTAAVSSTLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...GGTTGAGGAGACAGCCGCAGTCTGGGTCCTTGTTACCTCGAGTTGAACCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: LSTDGREASPGTDSEELRTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp TCCGTTTGCGTTCTCCACCACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAAGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SVCVLHHESVDDILLGVEGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...TTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGAACGCAAACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGAGAGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LSTDGREASPGTDSEELRGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...TCTCAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp TCATATTTCTGCTCAGGTGGGAGAACTTCACTTCAATCAGCTTCCGTGGGTTTAAGGTGCCAACGGGCTTaGGTAGTACCACCCCGGCAG +
Preference number: 5 (lower is better)
Translates to: SYFCSGGRTSLQSASVGLRCQRA*VVPPRQ
Trigger: CTGCCGGGGTGGTACTACCAAAGCCCGTTGGCACCT...TAAACCCACGGAAGCTGATTGAAGTGAAGTTCTCCCACCTGAGCAGAAATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SALSLHTDWSPWSNAESICPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCCTGCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: ESVDDILLGVEPVLHLLLLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...CAGGAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp ATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGCAGTCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: MSFVSIGRSPAVLGVSGSLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...ACTGCCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTGGGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: WNVLCFHWSQPSCLGSLWAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...CCAGAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: SYSALSLHTDWSPWSNAEAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...CTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: SALSLHTDWSPWSNAESISVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTATCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CAA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGAAATGGCTAATGGGTaGGAAGGCACAGGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSEMANG*EGTGQG
Trigger: CCCCTGGCCTGTGCCTTCCAACCCATTAGCCATTTC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAACCGAAACAGAGCTCACTCCAGAGATCCGCACAGCCCAAATCTCAGAGGCAGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: STETELTPEIRTAQISEAASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...TGCCTCTGAGATTTGGGCTGTGCGGATCTCTGGAGTGAGCTCTGTTTCGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: LLECSSMQLSKAFGPLGWHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...CCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAAATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: TQLSPYTQTGVRGQMQSQILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...TTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAAGGGGATGGAAGAAAGGACTCAATCAATGAGGTCTGCTTCTGCGGACCGTCCTTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: QGDGRKDSINEVCFCGPSFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...GGACGGTCCGCAGAAGCAGACCTCATTGATTGAGTCCTTTCTTCCATCCCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAAGCTGGGGCCTGCAATTaGCAGCGCAGGAACAATGGG +
Preference number: 5 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKAGACN*QRRNNG
Trigger: CCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGC...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGGAGTGGAGGTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: NRHVWGNEPYTGLDPEWRFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...CCTCCACTCCGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAACGGGCTTTGGTAGTACCACCCCGGCAGTGTAAACTGCTTGGAAGATGCCCTTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QRALVVPPRQCKLLGRCPWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...AGGGCATCTTCCAAGCAGTTTACACTGCCGGGGTGGTACTACCAAAGCCCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: FLESRSKRQSRLLGPAICLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTCAGACACCCGCATTTTaGGGGCCTTACAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: QNWSNPLGTQLLVDTQEVQTPAF*GPYRKT
Trigger: TGTCTTCCTGTAAGGCCCCAAAAATGCGGGTGTCTG...AACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543908.5
CDS-3UTR CAA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTCTCTCGTCCGCCATCTaGAGTTGCGAGAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSLSSAI*SCESRA
Trigger: AGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAG...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587670.2
CDS GCA 90 bp CGTTTGCGTTCTGAAGGGAAGGCAATAAAGAGGCAATGTCAAGCATaGACAGTGGCACTGCGGCCCGGGAACAAAATGTTTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: RLRSEGKAIKRQCQA*TVALRPGNKMFLSL
Trigger: GAGTGAGAGAAACATTTTGTTCCCGGGCCGCAGTGCCACTGTGCATGCTTGACATTGCCTCTTTATTGCCTTCCCTTCAGAACGCAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS-3UTR CAA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTTGGCTCCAGTGTCATaGGCTGGACTCAAACCACCC +
Preference number: 5 (lower is better)
Translates to: PHPKHTMSSGFGNSAELALAPVS*AGLKPP
Trigger: GGGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678576.1
CDS-3UTR CAA 90 bp TCCCCCGTCCCTGTTCCCAGACATGGCACCTGCCTGCCAGCCAGTCAGTATTTTTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SPVPVPRHGTCLPASQYFFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...AAAATACTGACTGGCTGGCAGGCAGGTGCCATGTCTGGGAACAGGGACGGGGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: MLPPSHHLLLSRAKITSKGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...CTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMATGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGTATTTCCTGGATCCTCTCTGCTGGCAAAGAGTTCATCTGTAGTCCTGGCTACACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: CISWILSAGKEFICSPGYTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...GTAGCCAGGACTACAGATGAACTCTTTGCCAGCAGAGAGGATCCAGGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR CAA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCATGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMAGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: SALSLHTDWSPWSNAESILAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GATCAGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: DQNWSNPLGTQLLVDTQEASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...TTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SLHTDWSPWSNAESIQRQASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...CTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGCCTCTAATCACTTCTaGCTACCACTTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: QLSKAFGPLGWLNAGRLWASNHF*LPLAGC
Trigger: ACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGC...CCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TACTGGAATGTCCTTTGTTTCCATTGGTCGCAGCCCAGCTGTCTTGGGAGTCTCTTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: YWNVLCFHWSQPSCLGSLFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...GAGACTCCCAAGACAGCTGGGCTGCGACCAATGGAAACAAAGGACATTCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AACAGATCAAGACTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: NRSRLGQGAFPSSRFPQGPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...ACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAGTCTTGATCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCTGAACACCACAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LEVQFHSPILPGHLAEHHKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...GTGGTGTTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GACTCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: DSDNGDGKPLLLPSPDLPLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTGTGTAGGTGTAGTCGGCTaGCAGGCCCGCCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: KSSGNLSPLRLRSPPRKCVGVVG*QARLHF
Trigger: AAAATGAAGGCGGGCCTGCAAGCCGACTACACCTAC...ACACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CACGAAAGTGTCGATGATATTCTCCTGGGGGTAGAACCAGTGCTCCACCTCCTCAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: HESVDDILLGVEPVLHLLRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...GAGGAGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTGTCCGCCATCTTGAGTaGCGAGAGCAGGGCTCCGCG +
Preference number: 5 (lower is better)
Translates to: KITENRCSLSLSTDGREAVRHLE*REQGSA
Trigger: CGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGAC...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCGGCTATTCAGGCTCCTaGGTGGCGCCTCCATTTTGG +
Preference number: 5 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSGYSGS*VAPPFW
Trigger: CCAAAATGGAGGCGCCACCAAGGAGCCTGAATAGCC...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS TCA 90 bp GTGCACCTCATGTTGTATGACACCTGCTGTGTTGCTTGGAGACTGTaGAGATGCTTCCTAAACCTCACCAACTGGAGCAGAAGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: VHLMLYDTCCVAWRL*RCFLNLTNWSRSSH
Trigger: GTGAGAGCTTCTGCTCCAGTTGGTGAGGTTTAGGAAGCATCTTCACAGTCTCCAAGCAACACAGCAGGTGTCATACAACATGAGGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 90 bp ATATGTACTCAGTGTCCAGGCCGGGGCTCTTGCTATTCCTGGTTATaGCTCCCTGAAACTCTAGTAATTTCCACAGTCCTCTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: ICTQCPGRGSCYSWL*LPETLVISTVLSGV
Trigger: GACTCCAGAGAGGACTGTGGAAATTACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCTGGACACTGAGTACATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS-3UTR CAA 90 bp CCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PVQPSLPPCWGISNCKGNLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...ATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CAA 90 bp ATAAAAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTCCACCACGAAAGTACTGGAGCAACCCTCTaGGAACGCAGCTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: IKAQEICHLSVCVLHHESTGATL*ERSFLW
Trigger: CCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGT...ACTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCGGCAGTGTAAACTGCTaGGAAGATGCCCTCCAGGTG +
Preference number: 5 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSGSVNC*EDALQV
Trigger: CACCTGGAGGGCATCTTCCAAGCAGTTTACACTGCC...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGTCCTTTGTTTCCATaGGTCGCAGCCCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCCPLFP*VAAQLS
Trigger: AGACAGCTGGGCTGCGACCAATGGAAACAAAGGACA...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: RTSLQSASVGLGTDANTCGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...GCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGTCACCTCTCCGTTaGCGTTCTCCACCACGAAAG +
Preference number: 5 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSLSPLR*RSPPRK
Trigger: CTTTCGTGGTGGAGAACGCAAACGGAGAGGTGACAG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGAACTTCACTTCAATCAGCTTCCGTGGGTTTAGGGACCGATGCCAATACCTGCGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: RTSLQSASVGLGTDANTCAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...GCAGGTATTGGCATCGGTCCCTAAACCCACGGAAGCTGATTGAAGTGAAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCAGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: GPLGWLNAGRLWGKNSGPAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...TGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGAAGTTCGCTGGCGGTTaGGTAAAGCCGGTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLKFAGG*VKPVQF
Trigger: GAACTGAACCGGCTTTACCAAACCGCCAGCGAACTT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGACCGTCCATTGCTTaGTCTCAGAATGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HFLLPLAGCILERGTTRNGPSIA*SQNAGR
Trigger: CCTGCCTGCATTCTGAGACAAAGCAATGGACGGTCC...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCATTTTGCCCGGTCACTaGGCTGAACACCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSILPGH*AEHHSR
Trigger: TCTGGAGTGGTGTTCAGCCAAGTGACCGGGCAAAAT...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCTTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GLWALRLVKCWSSLGKEFFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...GAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCCACCTTAGTGGAGTaGCTGGCTCTAGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITSTLVE*LALAAV
Trigger: GACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGA...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CAA 90 bp CTCCTACTCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGATTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: LLLSSLPTHRLESVVKCRFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...TCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGAGTAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCTTCAGAAATAGGCATGTGTGGGGAAACGAGCCCTATACAGGCCTCGATCCGCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LFRNRHVWGNEPYTGLDPQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...CGGATCGAGGCCTGTATAGGGCTCGTTTCCCCACACATGCCTATTTCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGCTTCCTTTGCTTGGTTaGAGACAGCCATGGCGCTAC +
Preference number: 5 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMLPLLG*RQPWRY
Trigger: GTAGCGCCATGGCTGTCTCAAACCAAGCAAAGGAAG...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTGGTAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: LPPVECSAHLAKNSSFFGKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...ACCAAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGCGACAGCAGTTAGACAGGAGTTGTGGGGAAGGCCTGACATTTTCCATAAACAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: GRQQLDRSCGEGLTFSINKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...GTTTATGGAAAATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGCTGTCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGGGTGGCTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: RQEVKVVFETWQLGGLGGFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...GCCACCCAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCAGGAGGAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: YTQTGVRGQMQSQSKGRRRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...CCTCCTGCCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGAACTGGAGCAACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: RTGATLLERSFLWTHRKLRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGTTGCTCCAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGGGCACTTTGTAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: EPFQVPGSPKVGKTWALCRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...ACAAAGTGCCCAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATTGGCTCCAGTGTCATaGGCTGGACTCAAACCACTG +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLLAPVS*AGLKPL
Trigger: CAGTGGTTTGAGTCCAGCCAATGACACTGGAGCCAA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS GCA 90 bp CCTCAGAGTGTACACATATGTACTCAGTGTCCAGGCCGGGGCTCTTaGTATTCCTGGTTATGCCTCCCTGAAACTCTAGTAATTTCCACA +
Preference number: 5 (lower is better)
Translates to: PQSVHICTQCPGRGS*YSWLCLPETLVIST
Trigger: TGTGGAAATTACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCTGGACACTGAGTACATATGTGTACACTCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS-3UTR CAA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTGGCTCCTGGCGGATATaGTCCTTGTCAGGCTCCACG +
Preference number: 5 (lower is better)
Translates to: KITENRCSLSLSTDGREAGSWRI*SLSGST
Trigger: CGTGGAGCCTGACAAGGACAATATCCGCCAGGAGCC...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMLERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCCCAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: SQKGLNEERRDYWDKNQMLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...CATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAATCACTTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: NGDGKPLLLPSPDLPLITSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...AGTGATTAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTAAATCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: QGTHPYKVGNNWLKSPFKSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...TTTAAAAGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GATCTGCCTCTAATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: DLPLITSCYHLQAVSWKGLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...CCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGATTAGAGGCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTACTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTAATACTGCAGGTTCTTGCAGGCTGTATCTaGGAAAGGGGCACAACAAGA +
Preference number: 5 (lower is better)
Translates to: LLCPHAGAFPIVKVILQVLAGCI*ERGTTR
Trigger: TCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAG...AACCTGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTCCTCCCACCTGTGGAATGCAGTGCGCATCTTGCTAAGAACAGCAGCTTCTTTACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LLPPVECSAHLAKNSSFFTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...AAAGAAGCTGCTGTTCTTAGCAAGATGCGCACTGCATTCCACAGGTGGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACGGGAAACCACTTCTGTaGCCAAGTCCAGATCTGCCT +
Preference number: 5 (lower is better)
Translates to: PKHTMSSGFGNSAELASDGKPLL*PSPDLP
Trigger: AGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCC...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTCCTCCTTCCCACCACTaGCTTCTCTCTAGAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SCYHLQAVSWKGAQQEMAPPSHH*LLSRAK
Trigger: TTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGG...AGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATAAACGTCAGTCACGATaGCTGGGGCCTGCAATTTGC +
Preference number: 5 (lower is better)
Translates to: HFLLPLAGCILERGTTRNKRQSR*LGPAIC
Trigger: GCAAATTGCAGGCCCCAGCAATCGTGACTGACGTTT...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAATTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGCTCTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: SALSLHTDWSPWSNAESIFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...GATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAACAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACCAGTCCAACCTTCTCTGCCCCCATGCTGGGGCATTTCCAATTGTAAAGGTACAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: HQSNLLCPHAGAFPIVKVQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTTGGACTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CAA 90 bp CTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGCAGAGCCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LMKIHLSGVAGSSSSLQSQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...GCTCTGCAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGGTCTCCAAAGGTCCCTGATGTTACAAGGAGGTCCAAGGGCCTCTTCAAACTGCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: WSPKVPDVTRRSKGLFKLQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...CAGTTTGAAGAGGCCCTTGGACCTCCTTGTAACATCAGGGACCTTTGGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTATCCAGAATCGCACTGGTGACTGGTTATTGTAGCACCAGTCCAACCTTCTCTGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LSRIALVTGYCSTSPTFSEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...AGAGAAGGTTGGACTGGTGCTACAATAACCAGTCACCAGTGCGATTCTGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
CDS-3UTR CAA 90 bp ATCACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAAAGTCCCAGAAGGGGTaGAATGAAGAACGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: ITSCYHLQAVSWKGAQQEKSQKG*NEERRD
Trigger: GTCCCTGCGTTCTTCATTCAACCCCTTCTGGGACTT...TTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACCTCAGGGTCCTTCCTTaGCTTGGTTTGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDLRVLP*LGLRQP
Trigger: TGGCTGTCTCAAACCAAGCAAAGGAAGGACCCTGAG...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATGCAGTTAGACAGGAGTaGTGGGGAAGGCCTGACATT +
Preference number: 5 (lower is better)
Translates to: HFLLPLAGCILERGTTRNAVRQE*WGRPDI
Trigger: AATGTCAGGCCTTCCCCACAACTCCTGTCTAACTGC...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACCCTCTTGGAACGCAGCTTCTTGTGGACACACAGGAAGTTGATCTCTACCATCAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: TLLERSFLWTHRKLISTIKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...GATGGTAGAGATCAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAAGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CTCCTTCTCCTAGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTATTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: LLLLECSSMQLSKAFGPLFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...TAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCTAGGAGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGTTCTCACCGCAACATAAAGCAGAGTCCGAGGAGCCGGCCACCTGGTTTCAGTTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: SSHRNIKQSPRSRPPGFSFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...ACTGAAACCAGGTGGCCGGCTCCTCGGACTCTGCTTTATGTTGCGGTGAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTCTCTCGTCCGCCATCTaGAGTTGCGAGAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: KITENRCSLSLSTDGREALSSAI*SCESRA
Trigger: AGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAG...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp CATGACGGGCGTAAGGTGAAATTGCTTCAAGTACCTGGTGAGGAGCTGGTGCACAAAAACAGAACCTCCTaGTTACCTTCACAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: HDGRKVKLLQVPGEELVHKNRTS*LPSQAD
Trigger: ATCAGCCTGTGAAGGTAACAAGGAGGTTCTGTTTTT...GTGCACCAGCTCCTCACCAGGTACTTGAAGCAATTTCACCTTACGCCCGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR CAA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGCACCATATTTCAGAGTaGGGATCTCCAAAGCAGATC +
Preference number: 5 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRHHISE*GSPKQI
Trigger: GATCTGCTTTGGAGATCCCAACTCTGAAATATGGTG...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS-3UTR CAA 90 bp CTAGGACAGGGAGCCTTTCCAAGTTCCAGGTTCCCCCAAGGTAGGAAAGACTTGTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: LGQGAFPSSRFPQGRKDLFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...CAAGTCTTTCCTACCTTGGGGGAACCTGGAACTTGGAAAGGCTCCCTGTCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GAAGGGCTAAGAAAGTGTCATGCCAGAAGAGGGCAGCAGCTCAGGAGAGGAAACTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: EGLRKCHARRGQQLRRGNFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...GTTTCCTCTCCTGAGCTGCTGCCCTCTTCTGGCATGACACTTTCTTAGCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000677949.1
CDS-3UTR CAA 90 bp AGGCCCCTGATGAAAATCCACCTTAGTGGAGTTGCTGGCTCTAGCAGCAGTCTGTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: RPLMKIHLSGVAGSSSSLFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...CAGACTGCTGCTAGAGCCAGCAACTCCACTAAGGTGGATTTTCATCAGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTCTACTGGAATGTCCTTaGTTTCCATTGGTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPLLECP*FPLVAA
Trigger: GGCTGCGACCAATGGAAACAAAGGACATTCCAGTAG...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTGCAGCTTTGAGACTCTaGTGGGTTGGATGGTTCATG +
Preference number: 5 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPAALRL*WVGWFM
Trigger: CATGAACCATCCAACCCACAAGAGTCTCAAAGCTGC...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATTACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTTCTGCGGACCGTCCATaGCTTTGTCTCAGAATGCAG +
Preference number: 5 (lower is better)
Translates to: ITSKPGSTISQPNFARSLSADRP*LCLRMQ
Trigger: CTGCATTCTGAGACAAAGCAATGGACGGTCCGCAGA...AAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: GWLNAGRLWGKNSGPQGLTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...GAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: CFKYLVRSWCTTGMSFVSTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...GGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TGCTTCAAGTACCTGGTGAGGAGCTGGTGCACTACTGGAATGTCCTTTGTTTCCCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: CFKYLVRSWCTTGMSFVSHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...GGAAACAAAGGACATTCCAGTAGTGCACCAGCTCCTCACCAGGTACTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCTTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACTTTCACAGCCCAATTTaGCCCGGTCACTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDFHSPI*PGHLAE
Trigger: TTCAGCCAAGTGACCGGGCAAAATTGGGCTGTGAAA...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCCTTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: ISQGTHPYKVGNNWLKSPFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...AGGGCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCCATCCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PHPKHTMSSGFGNSAELAWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...GGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGGATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAGGCCTTTGGGCCCTTAGGTTGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTGGGCACTTTGTCCTTaGATATCCTCAAAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: KAFGPLGWLNAGRLWGKNWALCP*ISSKVW
Trigger: CCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCA...ATTCTTTCCCCAAAGACGACCAGCATTTAACCAACCTAAGGGCCCAAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GGGATGGCGCTAATGAACCCAACCAATTTCCGACTTGAGACCACTCGAACCCCAAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: GMALMNPTNFRLETTRTPKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...TGGGGTTCGAGTGGTCTCAAGTCGGAAATTGGTTGGGTTCATTAGCGCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp AACGTCAGTCACGATTGCTGGGGCCTGCAATTTGCAGCGCAGGAACAATGGGAAAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: NVSHDCWGLQFAAQEQWEKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...TTCCCATTGTTCCTGCGCTGCAAATTGCAGGCCCCAGCAATCGTGACTGACGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATCCACGAGATGCTGGGGCCTTaGCCAGGAGATCTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LRFGKLAALTTITTTKIHEMLGP*PGDLFL
Trigger: AAGAAACAGATCTCCTGGCAAAGGCCCCAGCATCTC...GTGGATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATGTCTCCTCTGGAGGAAACCATGAACTGTGCCAACGCGTCTGTCTGCCACTGTTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: MSPLEETMNCANASVCHCFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...ACAGTGGCAGACAGACGCGTTGGCACAGTTCATGGTTTCCTCCAGAGGAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTGGGGCCTGCAAGAACGTCAATCCAAGTaGATCCTATACATTCACCTC +
Preference number: 5 (lower is better)
Translates to: SVSWSQGANVSHDCWGLQERQSK*ILYIHL
Trigger: GAGGTGAATGTATAGGATCAACTTGGATTGACGTTC...TTGCAGGCCCCAGCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676753.1
CDS-3UTR CAA 90 bp AGCCTTTCAACAGATGGCAGAGAAGCTAGTCCAGGCACAGACTCAGAGGAACTGTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SLSTDGREASPGTDSEELFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...CAGTTCCTCTGAGTCTGTGCCTGGACTAGCTTCTCTGCCATCTGTTGAAAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp CTCTCCCTACACACAGACTGGAGTCCGTGGTCAAATGCAGAGTCAATCCAAAGGTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: LSLHTDWSPWSNAESIQRFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...CCTTTGGATTGACTCTGCATTTGACCACGGACTCCAGTCTGTGTGTAGGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAGAGGGGTCTGGGTGTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGGGCGTAAGGTGAAATaGCTTCAAGTACCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: KRGLGVNVVERISSFETLGRKVK*LQVPGE
Trigger: CTCACCAGGTACTTGAAGCAATTTCACCTTACGCCC...AAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCACACCCAGACCCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587670.2
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTTCAGTTCTGCTCCCTTaGCCAGGGATTCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: VNVVERISSFETLVGWMVSVLLP*PGILTC
Trigger: ACACGTGAGAATCCCTGGCAAAGGGAGCAGAACTGA...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587670.2
ENST00000676753.1
ENST00000678332.1
CDS-3UTR CAA 90 bp CAGAAGGGGTTGAATGAAGAACGCAGGGACTACTGGGACAAAAATCAGATGAGCCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: QKGLNEERRDYWDKNQMSHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...GCTCATCTGATTTTTGTCCCAGTAGTCCCTGCGTTCTTCATTCAACCCCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GCTTCTTTGGTCTCAGTTTCTTGGAGTCAAGGAGCAAACGTCAGTCACGATTGCTTTGGTCTCAGTTTCTaGGAGTCAAGGAGCAAACGT +
Preference number: 5 (lower is better)
Translates to: ASLVSVSWSQGANVSHDCFGLSF*ESRSKR
Trigger: ACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAA...GCAATCGTGACTGACGTTTGCTCCTTGACTCCAAGAAACTGAGACCAAAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AGAGTGCAGCTCCATGCAGTTGTCCAAGGCCTTTGGGCCCTTAGGTTGGTTAAAAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: RVQLHAVVQGLWALRLVKKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...TTTAACCAACCTAAGGGCCCAAAGGCCTTGGACAACTGCATGGAGCTGCACTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CACTTCTTGCTACCACTTGCAGGCTGTATCTTGGAAAGGGGCACAACAAGAAATAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: HFLLPLAGCILERGTTRNKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...ATTTCTTGTTGTGCCCCTTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACAAATGCTGGTCGTCTTaGGGGAAAGAATTCAGGACC +
Preference number: 5 (lower is better)
Translates to: PKHTMSSGFGNSAELASDKCWSS*GKEFRT
Trigger: GGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTT...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGGTTAAATGCTGGTCGTCTTTGGGGAAAGAATTCAGGACCACAGGGACTCCCCTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: WLNAGRLWGKNSGPQGLPFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...GGGGAGTCCCTGTGGTCCTGAATTCTTTCCCCAAAGACGACCAGCATTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ATCCAAAGGCAGGAGGTAAAGGTCGTCTTTGAAACATGGCAGCTGGGAGGACTGTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: IQRQEVKVVFETWQLGGLFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...CAGTCCTCCCAGCTGCCATGTTTCAAAGACGACCTTTACCTCCTGCCTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCTAGAACAACAATGCATTaGGTATTTCCTCCCCGACCC +
Preference number: 5 (lower is better)
Translates to: LPPSHHLLLSRAKITSKPRTTMH*VFPPRP
Trigger: GGGTCGGGGAGGAAATACCAAATGCATTGTTGTTCT...AGGCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TTGATTACGTTTTGGGAAACTGGCAGCACTGACAACCATCACTACCACAAAAATTCAAACCCTTTCATTTaGGCGAGGACAAGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: LITFWETGSTDNHHYHKNSNPFI*ARTRAS
Trigger: CGACGCCCTTGTCCTCGCCAAAATGAAAGGGTTTGA...ATTTTTGTGGTAGTGATGGTTGTCAGTGCTGCCAGTTTCCCAAAACGTAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CCCAAGCATACGATGTCTTCTGGTTTTGGAAACTCTGCAGAATTAGCCTCTGACACTTCTTGCTACCACTaGCAGGCTGTATCTTGGAAA +
Preference number: 5 (lower is better)
Translates to: PKHTMSSGFGNSAELASDTSCYH*QAVSWK
Trigger: TTTCCAAGATACAGCCTGCAAGTGGTAGCAAGAAGT...GTCAGAGGCTAATTCTGCAGAGTTTCCAAAACCAGAAGACATCGTATGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TGCTACCTCCTTCCCACCACTTGCTTCTCTCTAGAGCAAAAATTACATCCAAGCCATGTGACCAGAGGCTaGATTACGTTTTGGGAAACT +
Preference number: 5 (lower is better)
Translates to: CYLLPTTCFSLEQKLHPSHVTRG*ITFWET
Trigger: AGTTTCCCAAAACGTAATCAAGCCTCTGGTCACATG...GCTTGGATGTAATTTTTGCTCTAGAGAGAAGCAAGTGGTGGGAAGGAGGTAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACATCCAAGCCTGGAAGTACAATTTCACAGCCCAATTTTGCCCGGTCACTTGGCAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: TSKPGSTISQPNFARSLGKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...GCCAAGTGACCGGGCAAAATTGGGCTGTGAAATTGTACTTCCAGGCTTGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCCAAGGTAGGAAAGACTaGGGCACTTTGTCCTTTGAT +
Preference number: 5 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSQGRKD*GTLSFD
Trigger: ATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTATTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000258960.7
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAAATTACAGAGAATAGGTGTTCTCTGAGCCTTTCAACAGATGGCAGAGAAGCTTTGGAACGCAGCTTCTaGTGGACACACAGGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KITENRCSLSLSTDGREALERSF*WTHRKL
Trigger: CAACTTCCTGTGTGTCCACAAGAAGCTGCGTTCCAA...AGCTTCTCTGCCATCTGTTGAAAGGCTCAGAGAACACCTATTCTCTGTAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590310.2
CDS-3UTR CAA 90 bp TCAGACAATGGAGATGGGAAACCACTTCTGTTGCCAAGTCCAGATCTGCCTCTAAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SDNGDGKPLLLPSPDLPLKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...TAGAGGCAGATCTGGACTTGGCAACAGAAGTGGTTTCCCATCTCCATTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp ACTCCAGAATGCCTACATCGACAGCCATGTGACCAGAGGCTTGATTACGTTTTGAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: TPECLHRQPCDQRLDYVLKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...CAAAACGTAATCAAGCCTCTGGTCACATGGCTGTCGATGTAGGCATTCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CTGTATCTTGGAAAGGGGCACAACAAGAAATGGCTAATGGGTTGGAAGGCACAGTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: LYLGKGHNKKWLMGWKAQFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...CTGTGCCTTCCAACCCATTAGCCATTTCTTGTTGTGCCCCTTTCCAAGATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp AAAATCTCACAGGGGACTCATCCCTATAAGGTTGGCAACAACTGGCTAAAGAGCAAAGACTTGGGCACTTaGTCCTTTGATATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: KISQGTHPYKVGNNWLKSKDLGT*SFDILK
Trigger: TTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTT...GCTCTTTAGCCAGTTGTTGCCAACCTTATAGGGATGAGTCCCCTGTGAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp CAAGGTAGGAAAGACTTGGGCACTTTGTCCTTTGATATCCTCAAAGGTCTGGACTTTAATGGAATGAAATaGTCCTCAACAGCCTCCGTA +
Preference number: 5 (lower is better)
Translates to: QGRKDLGTLSFDILKGLDFNGMK*SSTASV
Trigger: TACGGAGGCTGTTGAGGACAATTTCATTCCATTAAA...GTCCAGACCTTTGAGGATATCAAAGGACAAAGTGCCCAAGTCTTTCCTACCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000258960.7
ENST00000587670.2
ENST00000592782.5
ENST00000676753.1
ENST00000678332.1
ENST00000678576.1
ENST00000678938.1
CDS-3UTR CAA 90 bp GTGAACGTTGTAGAAAGAATAAGCAGCTTTGAGACTCTTGTGGGTTGGATGGTTTTCTTTTTCTTCTTTTaGGCTCCAGTGTCATTGGCT +
Preference number: 5 (lower is better)
Translates to: VNVVERISSFETLVGWMVFFFFF*APVSLA
Trigger: AGCCAATGACACTGGAGCCAAAAAGAAGAAAAAGAA...AACCATCCAACCCACAAGAGTCTCAAAGCTGCTTATTCTTTCTACAACGTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000590114.6
ENST00000676753.1
ENST00000678332.1
CDS CCA 72 bp GCTGTGAGGAGAAGCCCTGTCCTCCCAGGGAAGGCCTaGCTATTCAGGCTCCTTGGTGGCGCCTCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: AVRRSPVLPGKA*LFRLLGGASCE
Trigger: CTCACAGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAGGGCTTCTCCTCACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 72 bp GAGACATGGACACCCTGGGCCGGGCAGCCTGGACTCTaGCTATGTGTCGCCTACCTTCTCTGCCCCCATGCT +
Preference number: 6 (lower is better)
Translates to: ETWTPWAGQPGL*LCVAYLLCPHA
Trigger: AGCATGGGGGCAGAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 72 bp TCTGCTGGAGACATGGACACCCTGGGCCGGGCAGCCTaGACTCTGGCTATGTGTCGCCTACCTTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: SAGDMDTLGRAA*TLAMCRLPSLP
Trigger: GGGCAGAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 72 bp TCTCCTCAACCCATGGCCCGGTTTCTGCTGGAGACATaGACACCCTGGGCCGGGCAGCCTGGACTCTGGCTA +
Preference number: 6 (lower is better)
Translates to: SPQPMARFLLET*TPWAGQPGLWL
Trigger: TAGCCAGAGTCCAGGCTGCCCGGCCCAGGGTGTCCATGTCTCCAGCAGAAACCGGGCCATGGGTTGAGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS TCA 72 bp CTCAGGGCACTTGAGGACAGAGCCGTGATCGTGGGCTaGACCTGCCAGACCTCTTTCCCAGCATGGGCACCG +
Preference number: 6 (lower is better)
Translates to: LRALEDRAVIVG*TCQTSFPAWAP
Trigger: CGGTGCCCATGCTGGGAAAGAGGTCTGGCAGGTTCAGCCCACGATCACGGCTCTGTCCTCAAGTGCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS GCA 72 bp CATCATCTGCGGCAGCGGAGGTGCCGGCGGCTTCACTaGTGTCTCACTCTCGTCCGCCATCTTGAGTTGCGA +
Preference number: 6 (lower is better)
Translates to: HHLRQRRCRRLH*CLTLVRHLELR
Trigger: TCGCAACTCAAGATGGCGGACGAGAGTGAGACAGCAGTGAAGCCGCCGGCACCTCCGCTGCCGCAGATGATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000258960.7
ENST00000587014.2
ENST00000587670.2
ENST00000590310.2
ENST00000591931.2
ENST00000592782.5
ENST00000676828.1
ENST00000677949.1
ENST00000678576.1
ENST00000678606.1
CDS GCA 72 bp TTCACTGCTGTCTCACTCTCGTCCGCCATCTTGAGTTaGGAGAGCAGGGCTCCGCGCCCCACTACATGGGGG +
Preference number: 6 (lower is better)
Translates to: FTAVSLSSAILS*ESRAPRPTTWG
Trigger: CCCCCATGTAGTGGGGCGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAGTGAGACAGCAGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592782.5
ENST00000676828.1
CDS CCA 72 bp CAGGGCAGGGACCAGATTGCCTACAGCAGGCTGGGCTaGGCTGGGCACAGGTTACCAGAACCCACAGCAAAG +
Preference number: 6 (lower is better)
Translates to: QGRDQIAYSRLG*AGHRLPEPTAK
Trigger: CTTTGCTGTGGGTTCTGGTAACCTGTGCCCAGCCCAGCCCAGCCTGCTGTAGGCAATCTGGTCCCTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 72 bp CTTCACTGCTGTCTCACTCTCGTCCGCCATCTTGAGTaGCGAGAGCAGGGCTCCGCGCCCCACTACATGGGG +
Preference number: 6 (lower is better)
Translates to: LHCCLTLVRHLE*REQGSAPHYMG
Trigger: CCCCATGTAGTGGGGCGCGGAGCCCTGCTCTCGCAACTCAAGATGGCGGACGAGAGTGAGACAGCAGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592782.5
ENST00000676828.1
CDS CAA 72 bp CTGTCCTCCCAGGGAAGGCCTGGCTATTCAGGCTCCTaGGTGGCGCCTCCATTTTGGCGAGGACAAGGGCGT +
Preference number: 6 (lower is better)
Translates to: LSSQGRPGYSGS*VAPPFWRGQGR
Trigger: ACGCCCTTGTCCTCGCCAAAATGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS TCA 72 bp GCTGGGCACAGGTTACCAGAACCCACAGCAAAGCACTaGCAGACGGGCTCGCCATCCGCTACTGGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: AGHRLPEPTAKH*QTGSPSATGSW
Trigger: CCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTCAGTGCTTTGCTGTGGGTTCTGGTAACCTGTGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp CCACAGCTTCCATCTGGCCGGGCCTCTCAGTGCCCCTaGTGCAGAAAGACCCCGGTTGTAGCTGTTGTCCTC +
Preference number: 6 (lower is better)
Translates to: PQLPSGRASQCP*CRKTPVVAVVL
Trigger: GAGGACAACAGCTACAACCGGGGTCTTTCTGCATCAGGGGCACTGAGAGGCCCGGCCAGATGGAAGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS CCA 72 bp GCTGTGAGGAGAAGCCCTGTCCTCCCAGGGAAGGCCTaGCTATTCAGGCTCCTTGGTGGCGCCTCCATTTTG +
Preference number: 6 (lower is better)
Translates to: AVRRSPVLPGKA*LFRLLGGASIL
Trigger: CAAAATGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAGGGCTTCTCCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS CCA 72 bp ACCAGCTGTCCACTCTTGCCTCCCACAGCTTCCATCTaGCCGGGCCTCTCAGTGCCCCTGATGCAGAAAGAC +
Preference number: 6 (lower is better)
Translates to: TSCPLLPPTASI*PGLSVPLMQKD
Trigger: GTCTTTCTGCATCAGGGGCACTGAGAGGCCCGGCCAGATGGAAGCTGTGGGAGGCAAGAGTGGACAGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678332.1
CDS TCA 72 bp AGGCTCCACGGGGCCATGGGTGTTCACCACTTCGCCTaGAAGAAGAGCACAGCTGTGAGCCTCACCCTTTGC +
Preference number: 6 (lower is better)
Translates to: RLHGAMGVHHFA*KKSTAVSLTLC
Trigger: GCAAAGGGTGAGGCTCACAGCTGTGCTCTTCTTTCAGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588455.5
CDS TCA 72 bp AGGGACATTGGCTCAGGGCACTTGAGGACAGAGCCGTaGTCGTGGGCTGAACCTGCCAGACCTCTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: RDIGSGHLRTEP*SWAEPARPLSQ
Trigger: CTGGGAAAGAGGTCTGGCAGGTTCAGCCCACGATCACGGCTCTGTCCTCAAGTGCCCTGAGCCAATGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS GCA 72 bp GGAGGACCAAACACGGATGGTCAAGGAAGTCTAAGGTaGCAACACTCGAGCCCTGGGAACCCGGCCACTCAG +
Preference number: 6 (lower is better)
Translates to: GGPNTDGQGSLR*QHSSPGNPATQ
Trigger: CTGAGTGGCCGGGTTCCCAGGGCTCGAGTGTTGGCACCTTAGACTTCCTTGACCATCCGTGTTTGGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS CCA 72 bp TCACCACGACAGACAGCAATCACCCCTTTCCCACGCTaGGAAAGCTGTGAGGAGAAGCCCTGTCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SPRQTAITPFPR*ESCEEKPCPPR
Trigger: CCTGGGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGCGTGGGAAAGGGGTGATTGCTGTCTGTCGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 72 bp GTGAGGACAGGTGGGGACAGCCTCCTTCCTACCCCTTaGCTGCCATTTCAAAGCTGTCCTGTGGGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VRTGGDSLLPTP*LPFQSCPVGSH
Trigger: GTGGCTGCCCACAGGACAGCTTTGAAATGGCAGCAAAGGGGTAGGAAGGAGGCTGTCCCCACCTGTCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp CTAAAAACTGCGGGAACCCTGCCTAAGCAGAACAGATaGGGAGGGCTCAGAGCCTCCAGCCCATGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LKTAGTLPKQNR*GGLRASSPWEA
Trigger: AGCCTCCCATGGGCTGGAGGCTCTGAGCCCTCCTCATCTGTTCTGCTTAGGCAGGGTTCCCGCAGTTTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp GGCTCGCCATCCGCTACTGGCAGTTGGATGCTCCAATaGCTCACCACGACAGACAGCAATCACCCCTTTCCC +
Preference number: 6 (lower is better)
Translates to: GSPSATGSWMLQ*LTTTDSNHPFP
Trigger: GGGAAAGGGGTGATTGCTGTCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 72 bp GACAGACGGGCTCGCCATCCGCTACTGGCAGTTGGATaGTCCAATGACTCACCACGACAGACAGCAATCACC +
Preference number: 6 (lower is better)
Translates to: DRRARHPLLAVG*SNDSPRQTAIT
Trigger: GGTGATTGCTGTCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 72 bp TTGTCCTCCTCATTCTCGCAATCGCTGCAGTGCTCATaGCCGTTCCCGTTCCCTTCCATCATCTGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: LSSSFSQSLQCS*PFPFPSIICGS
Trigger: GCTGCCGCAGATGATGGAAGGGAACGGGAACGGCCATGAGCACTGCAGCGATTGCGAGAATGAGGAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000258960.7
ENST00000543908.5
ENST00000585561.5
ENST00000587014.2
ENST00000587670.2
ENST00000590114.6
ENST00000590310.2
ENST00000591931.2
ENST00000592782.5
ENST00000676753.1
ENST00000676828.1
ENST00000677949.1
ENST00000678332.1
ENST00000678576.1
ENST00000678606.1
CDS CCA 72 bp CTTTCACGACAGACAGCAATCACCCCTTTCCCACGCTaGGAAAGCTGTGAGGAGAAGCCCTGTCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LSRQTAITPFPR*ESCEEKPCPPR
Trigger: CCTGGGAGGACAGGGCTTCTCCTCACAGCTTTCCCAGCGTGGGAAAGGGGTGATTGCTGTCTGTCGTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678576.1
CDS CAA 72 bp CTGTCCTCCCAGGGAAGGCCTGGCTATTCAGGCTCCTaGGTGGCGCCTCCTGTGAGAACGAAACTCACTGAA +
Preference number: 6 (lower is better)
Translates to: LSSQGRPGYSGS*VAPPVRTKLTE
Trigger: TTCAGTGAGTTTCGTTCTCACAGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 72 bp GCACTGACAGACGGGCTCGCCATCCGCTACTGGCAGTaGGATGCTCCAATGACTCACCACGACAGACAGCAA +
Preference number: 6 (lower is better)
Translates to: ALTDGLAIRYWQ*DAPMTHHDRQQ
Trigger: TTGCTGTCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 90 bp GGAGAAGCCCTGTCCTCCCAGGGAAGGCCTGGCTATTCAGGCTCCTaGGTGGCGCCTCCTGTGAGAACGAAACTCACTGAAATGAATCAG +
Preference number: 6 (lower is better)
Translates to: GEALSSQGRPGYSGS*VAPPVRTKLTEMNQ
Trigger: CTGATTCATTTCAGTGAGTTTCGTTCTCACAGGAGGCGCCACCAAGGAGCCTGAATAGCCAGGCCTTCCCTGGGAGGACAGGGCTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 90 bp CACAGCAAAGCACTGACAGACGGGCTCGCCATCCGCTACTGGCAGTaGGATGCTCCAATGACTCACCACGACAGACAGCAATCACCCCTT +
Preference number: 6 (lower is better)
Translates to: HSKALTDGLAIRYWQ*DAPMTHHDRQQSPL
Trigger: AAGGGGTGATTGCTGTCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTCAGTGCTTTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 72 bp AGCAAAGCACTGACAGACGGGCTCGCCATCCGCTACTaGCAGTTGGATGCTCCAATGACTCACCACGACAGA +
Preference number: 6 (lower is better)
Translates to: SKALTDGLAIRY*QLDAPMTHHDR
Trigger: TCTGTCGTGGTGAGTCATTGGAGCATCCAACTGCCAGTAGCGGATGGCGAGCCCGTCTGTCAGTGCTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 72 bp TGGCGGATATTGTCCTTGTCAGGCTCCACGGGGCCATaGGTGTTCACCACTTCGCCTGAAAGAAGAGCACAG +
Preference number: 6 (lower is better)
Translates to: WRILSLSGSTGP*VFTTSPERRAQ
Trigger: CTGTGCTCTTCTTTCAGGCGAAGTGGTGAACACCCATGGCCCCGTGGAGCCTGACAAGGACAATATCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588455.5
CDS CAA 90 bp GAGCCCATTCCTCTGAGAAGCTGGCTCTGGTCAGCTACATGGGGTTaGTGTTGCTTCCTTACTCCATGGATGCCCCAACTCTCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: EPIPLRSWLWSATWG*CCFLTPWMPQLSGP
Trigger: AGGGCCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTCAGAGGAATGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 90 bp CAAGAACAGGTGAGGACAGGTGGGGACAGCCTCCTTCCTACCCCTTaGCTGCCATTTCAAAGCTGTCCTGTGGGCAGCCACAAGAACAAG +
Preference number: 6 (lower is better)
Translates to: QEQVRTGGDSLLPTP*LPFQSCPVGSHKNK
Trigger: CTTGTTCTTGTGGCTGCCCACAGGACAGCTTTGAAATGGCAGCAAAGGGGTAGGAAGGAGGCTGTCCCCACCTGTCCTCACCTGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp GTCCTCTCTGGAGTCCAAACCCTGAGCCCATTCCTCTaGGAAGCTGGCTCTGGTCAGCTACATGGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: VLSGVQTLSPFL*EAGSGQLHGVC
Trigger: ACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTCAGAGGAATGGGCTCAGGGTTTGGACTCCAGAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp CCACTCCCTGACTCACCTCCACCACGAAAGTGTCGATaGTATTCTCCTGGGGGTAGAACCAGTGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: PLPDSPPPRKCR*YSPGGRTSAPP
Trigger: AGGTGGAGCACTGGTTCTACCCCCAGGAGAATATCATCGACACTTTCGTGGTGGAGGTGAGTCAGGGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS CAA 90 bp CATTCCTCTGAGAAGCTGGCTCTGGTCAGCTACATGGGGTTTGTGTaGCTTCCTTACTCCATGGATGCCCCAACTCTCAGGCCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: HSSEKLALVSYMGFV*LPYSMDAPTLRPSV
Trigger: CACTGAGGGCCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTCAGAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 72 bp CAGCCTGGACTCTGGCTATGTGTCGCCTACCTTCTCTaGCCCCATGCTGGGGCATTTCCAATTGTAAAGGTA +
Preference number: 6 (lower is better)
Translates to: QPGLWLCVAYLL*PHAGAFPIVKV
Trigger: TACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTAGGCGACACATAGCCAGAGTCCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS CCA 72 bp TGGAGTCCAAACCCTGAGCCCATTCCTCTGAGAAGCTaGCTCTGGTCAGCTACATGGGGTTTGTGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: WSPNPEPIPLRS*LWSATWGLCCF
Trigger: GAAGCAACACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTCAGAGGAATGGGCTCAGGGTTTGGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CAA 72 bp GAGAAGCTGGCTCTGGTCAGCTACATGGGGTTTGTGTaGCTTCCTTACTCCATGGATGCCCCAACTCTCAGG +
Preference number: 6 (lower is better)
Translates to: EKLALVSYMGFV*LPYSMDAPTLR
Trigger: CCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACACAAACCCCATGTAGCTGACCAGAGCCAGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 72 bp CTTACTCCATGGATGCCCCAACTCTCAGGCCCTCAGTaGACCTCATGTTGTATGACACCTGCTGTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: LTPWMPQLSGPQ*TSCCMTPAVLL
Trigger: AAGCAACACAGCAGGTGTCATACAACATGAGGTGCACTGAGGGCCTGAGAGTTGGGGCATCCATGGAGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 72 bp CTACATGGGGTTTGTGTTGCTTCCTTACTCCATGGATaGCCCAACTCTCAGGCCCTCAGTGCACCTCATGTT +
Preference number: 6 (lower is better)
Translates to: LHGVCVASLLHG*PNSQALSAPHV
Trigger: AACATGAGGTGCACTGAGGGCCTGAGAGTTGGGGCATCCATGGAGTAAGGAAGCAACACAAACCCCATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 72 bp CAGTGTCCAGGCCGGGGCTCTTGCTATTCCTGGTTATaGCTCCCTGAAACTCTAGTAATTTCCACAGTCCTC +
Preference number: 6 (lower is better)
Translates to: QCPGRGSCYSWL*LPETLVISTVL
Trigger: GAGGACTGTGGAAATTACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCTGGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 72 bp ACCAACTCCCTGTTTTTAGGGAGGACCAAACACGGATaGTCAAGGAAGTCTAAGGTGCCAACACTCGAGCCC +
Preference number: 6 (lower is better)
Translates to: TNSLFLGRTKHG*SRKSKVPTLEP
Trigger: GGGCTCGAGTGTTGGCACCTTAGACTTCCTTGACCATCCGTGTTTGGTCCTCCCTAAAAACAGGGAGTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS TCA 72 bp AGGCCGGGGCTCTTGCTATTCCTGGTTATGCCTCCCTaGAACTCTAGTAATTTCCACAGTCCTCTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RPGLLLFLVMPP*NSSNFHSPLWS
Trigger: ACTCCAGAGAGGACTGTGGAAATTACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS CCA 72 bp CTGGACTCAAACCACTGGTACACCATATTTCAGAGTTaGGATCTCCAAAGCAGATCTGAGGATGGCACCGGG +
Preference number: 6 (lower is better)
Translates to: LDSNHWYTIFQS*DLQSRSEDGTG
Trigger: CCCGGTGCCATCCTCAGATCTGCTTTGGAGATCCCAACTCTGAAATATGGTGTACCAGTGGTTTGAGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678938.1
CDS GCA 72 bp GTACACATATGTACTCAGTGTCCAGGCCGGGGCTCTTaGTATTCCTGGTTATGCCTCCCTGAAACTCTAGTA +
Preference number: 6 (lower is better)
Translates to: VHICTQCPGRGS*YSWLCLPETLV
Trigger: TACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCTGGACACTGAGTACATATGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS GCA 72 bp ACTCTGGCTATGTGTCGCCTACCTTCTCTGCCCCCATaGTGGGGCATTTCCAATTGTAAAGGTAATACTGCA +
Preference number: 6 (lower is better)
Translates to: TLAMCRLPSLPP*WGISNCKGNTA
Trigger: TGCAGTATTACCTTTACAATTGGAAATGCCCCAGCATGGGGGCAGAGAAGGTAGGCGACACATAGCCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000677949.1
CDS GCA 72 bp TCTGAAGGGAAGGCAATAAAGAGGCAATGTCAAGCATaGACAGTGGCACTGCGGCCCGGGAACAAAATGTTT +
Preference number: 6 (lower is better)
Translates to: SEGKAIKRQCQA*TVALRPGNKMF
Trigger: AAACATTTTGTTCCCGGGCCGCAGTGCCACTGTGCATGCTTGACATTGCCTCTTTATTGCCTTCCCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS CCA 72 bp TGTACTCAGTGTCCAGGCCGGGGCTCTTGCTATTCCTaGTTATGCCTCCCTGAAACTCTAGTAATTTCCACA +
Preference number: 6 (lower is better)
Translates to: CTQCPGRGSCYS*LCLPETLVIST
Trigger: TGTGGAAATTACTAGAGTTTCAGGGAGGCATAACCAGGAATAGCAAGAGCCCCGGCCTGGACACTGAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp ATGTTGTATGACACCTGCTGTGTTGCTTGGAGACTGTaGAGATGCTTCCTAAACCTCACCAACTGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: MLYDTCCVAWRL*RCFLNLTNWSR
Trigger: TCTGCTCCAGTTGGTGAGGTTTAGGAAGCATCTTCACAGTCTCCAAGCAACACAGCAGGTGTCATACAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2
CDS TCA 72 bp ACCATCGTCCAACATGCTCTTTTCCCAGGAATGGCCTaGAGCACACGAGTGGAACACTGCATAGAACTTTTA +
Preference number: 6 (lower is better)
Translates to: TIVQHALFPGMA*STRVEHCIELL
Trigger: TAAAAGTTCTATGCAGTGTTCCACTCGTGTGCTTCAGGCCATTCCTGGGAAAAGAGCATGTTGGACGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592654.3
CDS TCA 72 bp AAGCTCAGGAAATCTGTCACCTCTCCGTTTGCGTTCTaGAGGGAAGGCAATAAAGAGGCAATGTCAAGCATG +
Preference number: 6 (lower is better)
Translates to: KLRKSVTSPFAF*REGNKEAMSSM
Trigger: CATGCTTGACATTGCCTCTTTATTGCCTTCCCTTCAGAACGCAAACGGAGAGGTGACAGATTTCCTGAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000678606.1
CDS GCA 72 bp AATGAATCAGGAGGAGTTCAATGCCTTCACTTCGGATaGTCCTTGTTCCCTCCAAGTTTTGAGTTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: NESGGVQCLHFG*SLFPPSFEFLP
Trigger: AGGCAGAAACTCAAAACTTGGAGGGAACAAGGAGCATCCGAAGTGAAGGCATTGAACTCCTCCTGATTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587014.2
ENST00000591931.2