Pregenerated sensors for NMS (Homo sapiens)
Ensembl gene IDs: ENSG00000204640Ensembl transcript IDs: ENST00000376865.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCAGTCCCCGAGCCTCGCTGCAGAATTCTCTTCATCCGCCTGTTaGCGAGCTTGGCAGCCAGGTGCATTAGAGGATGCACTGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: QQSPSLAAEFSSSAC*RAWQPGALEDALEE Trigger: TTCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCGAGGCTCGGGGACTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS CCA 90 bp | CCGAGCCTCGCTGCAGAATTCTCTTCATCCGCCTGTTGGCGAGCTTaGCAGCCAGGTGCATTAGAGGATGCACTGGAGGAAACCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: PSLAAEFSSSACWRA*QPGALEDALEETQF Trigger: AAACTGGGTTTCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCGAGGCTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS GCA 90 bp | TGCAGAATTCTCTTCATCCGCCTGTTGGCGAGCTTGGCAGCCAGGTaGATTAGAGGATGCACTGGAGGAAACCCAGTTTTAACTGGATGT | + |
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Preference number: 5 (lower is better) Translates to: CRILFIRLLASLAAR*IRGCTGGNPVLTGC Trigger: ACATCCAGTTAAAACTGGGTTTCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS CAA 90 bp | GCAGCAGTCCCCGAGCCTCGCTGCAGAATTCTCTTCATCCGCCTGTaGGCGAGCTTGGCAGCCAGGTGCATTAGAGGATGCACTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAVPEPRCRILFIRL*ASLAARCIRGCTGG Trigger: TCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCGAGGCTCGGGGACTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS CAA 90 bp | CCCGAGCCTCGCTGCAGAATTCTCTTCATCCGCCTGTTGGCGAGCTaGGCAGCCAGGTGCATTAGAGGATGCACTGGAGGAAACCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PEPRCRILFIRLLAS*AARCIRGCTGGNPV Trigger: AACTGGGTTTCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCGAGGCTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS CCA 72 bp | CCGAGCCTCGCTGCAGAATTCTCTTCATCCGCCTGTTaGCGAGCTTGGCAGCCAGGTGCATTAGAGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: PSLAAEFSSSAC*RAWQPGALEDA Trigger: TGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCGAGGCTCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS CAA 72 bp | CGCTGCAGAATTCTCTTCATCCGCCTGTTGGCGAGCTaGGCAGCCAGGTGCATTAGAGGATGCACTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RCRILFIRLLAS*AARCIRGCTGG Trigger: TCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS CCA 72 bp | GCTGCAGAATTCTCTTCATCCGCCTGTTGGCGAGCTTaGCAGCCAGGTGCATTAGAGGATGCACTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: AAEFSSSACWRA*QPGALEDALEE Trigger: TTCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAGAATTCTGCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS GCA 72 bp | CTCTTCATCCGCCTGTTGGCGAGCTTGGCAGCCAGGTaGATTAGAGGATGCACTGGAGGAAACCCAGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LFIRLLASLAAR*IRGCTGGNPVL Trigger: TAAAACTGGGTTTCCTCCAGTGCATCCTCTAATGCACCTGGCTGCCAAGCTCGCCAACAGGCGGATGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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| CDS GCA 72 bp | TATGTCTTGATTATCCTTAGGTTGGCGAGAAAGAGGTaGCCACTGACTCAGACAATATGCCAGCTGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: YVLIILRLARKR*PLTQTICQLLK Trigger: CTTGAGCAGCTGGCATATTGTCTGAGTCAGTGGGCACCTCTTTCTCGCCAACCTAAGGATAATCAAGACATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376865.1 |
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