RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NMRK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000077009

Ensembl transcript IDs: ENST00000168977.6, ENST00000593949.1, ENST00000597889.1, ENST00000599576.5, ENST00000616156.4

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTaGCCGCATCCGCGTCCGGGTCCCTGTGTCCTGGCTGGGCGAGCC +
Preference number: 1 (lower is better)
Translates to: AHMLSCWDAAGLAVL*PHPRPGPCVLAGRA
Trigger: GGCTCGCCCAGCCAGGACACAGGGACCCGGACGCGGATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
3UTR GCA 90 bp GACACCCCCATAGGGAAACGCTCACATGCTGTCCTGCTGGGACGCTaGAGGCCTGGCCGTTCTGTGGCCGCATCCGCGTCCGGGTCCCTG +
Preference number: 1 (lower is better)
Translates to: DTPIGKRSHAVLLGR*RPGRSVAASASGSL
Trigger: CAGGGACCCGGACGCGGATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCTATGGGGGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599576.5
3UTR TCA 90 bp CTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTaGGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTA +
Preference number: 1 (lower is better)
Translates to: LKLQRGYRGVLGLSP*APGRPTGSGASTLL
Trigger: TAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
3UTR CCA 90 bp CGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACG +
Preference number: 1 (lower is better)
Translates to: RLGAQSLSSGTPNWE*GLHSPTYRHPHRET
Trigger: CGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
3UTR GCA 90 bp CTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCTCACATaGTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTGGCCGC +
Preference number: 1 (lower is better)
Translates to: LHSPTYRHPHRETLT*CPAGTLQAWPFCGR
Trigger: GCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599576.5
3UTR-3UTR CCA 90 bp GAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACG +
Preference number: 2 (lower is better)
Translates to: EAAARLQRRLGAQSLSSGTPNWE*GLHSPT
Trigger: CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT...CCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
3UTR-3UTR CCA 90 bp ACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACG +
Preference number: 2 (lower is better)
Translates to: TTEAAARLQRRLGAQSLSTPNWE*GLHSPT
Trigger: CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT...GCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
3UTR-3UTR CCA 90 bp TGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTACATGGGCCACACGTaGCCATCGAAGAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: CRPGRPLPHRWPPSPAYTYMGHT*PSKRPG
Trigger: CCCCGGCCTCTTCGATGGCCACGTGTGGCCCATGTA...AGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
3UTR-3UTR TCA 90 bp ACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCGACCCAGTTTACTACTaGAGCTGCAGCGAGGTTACA +
Preference number: 2 (lower is better)
Translates to: TTEAAARLQRRLGAQSLSDPVYY*SCSEVT
Trigger: TGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTC...GCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
3UTR-3UTR GCA 90 bp CACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCCACACTACTTCTCCTCCACTTaGACTCTTCATACGGGACGG +
Preference number: 2 (lower is better)
Translates to: HGRAPLGTSCRPGRPLPHYFSST*TLHTGR
Trigger: CCGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTA...GTGTGGAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
3UTR-3UTR GCA 90 bp TCATGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATCAGGGACTGTGTAGTTaGGGGTACTTCTCCTCCACT +
Preference number: 2 (lower is better)
Translates to: SCRPGRPLPHRWPPSPAYQGLCS*GYFSST
Trigger: AGTGGAGGAGAAGTACCCGCAACTACACAGTCCCTG...ATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
3UTR-3UTR CCA 90 bp TTCACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCCACTCCTGCCTATACTTCTaGTACATGGGCCACACGTGG +
Preference number: 2 (lower is better)
Translates to: FTEELLSGLHAVQVDHFHSCLYF*YMGHTW
Trigger: CCACGTGTGGCCCATGTACCAGAAGTATAGGCAGGA...GTGGAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
3UTR-3UTR GCA 90 bp CCTGGGAGCGGTTCAGCAGCGAGTTCTGAATGTCTTCCAGGACTTCACGGAAGATTGGCCTCCATCTCCTaGCTATACTTCTGGTACATG +
Preference number: 2 (lower is better)
Translates to: PGSGSAASSECLPGLHGRLASIS*LYFWYM
Trigger: CATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAA...TCTTCCGTGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAACCGCTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
3UTR CCA 72 bp CTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTaGCCGCATCCGCGTCCGGGTCCCTGTGTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: LSCWDAAGLAVL*PHPRPGPCVLA
Trigger: AGCCAGGACACAGGGACCCGGACGCGGATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
3UTR GCA 72 bp ATAGGGAAACGCTCACATGCTGTCCTGCTGGGACGCTaGAGGCCTGGCCGTTCTGTGGCCGCATCCGCGTCC +
Preference number: 3 (lower is better)
Translates to: IGKRSHAVLLGR*RPGRSVAASAS
Trigger: GGACGCGGATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCTAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
3UTR CCA 72 bp GCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACGTACAGACACCCCCAT +
Preference number: 3 (lower is better)
Translates to: AQSLSSGTPNWE*GLHSPTYRHPH
Trigger: ATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
3UTR CCA 72 bp CTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTaGGAGTGGGGCCTCCACTCTCCTACGTACAGACAC +
Preference number: 3 (lower is better)
Translates to: LGAQSLSSGTPN*EWGLHSPTYRH
Trigger: GTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
3UTR-3UTR CAA 90 bp TTCACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCCACGTACTTCTCCTCCACTaGCACTCTTCATACGGGACG +
Preference number: 3 (lower is better)
Translates to: FTEELLSGLHAVQVDHFHVLLLH*HSSYGT
Trigger: CGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTAC...GTGGAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp CTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCCCTGTGTCCTGGCTaGGCGAGCCGGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGAQSLSSGTPNWEWGLHSLCPG*ASRGGG
Trigger: GCCCCCTCCCCGGCTCGCCCAGCCAGGACACAGGGA...GTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTGGTGCGACCACGCAGTaGGCTCCGGAGTGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: ASWGSVPELRDAQLGVGPGATTQ*APECVP
Trigger: CGGGACGCACTCCGGAGCGCACTGCGTGGTCGCACC...AGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR GCA 90 bp CTGTGGCCGCATCCGCGTCCGGGTCCCTGTGTCCTGGCTGGGCGAGCCGGGGAGGCTCACATGCTGTCCTaGTGGGACGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LWPHPRPGPCVLAGRAGEAHMLS*WDAAGL
Trigger: CAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGC...CTCCCCGGCTCGCCCAGCCAGGACACAGGGACCCGGACGCGGATGCGGCCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCTCCCTGTGTCCTGGCTaGGCGAGCCGGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPSLCPG*ASRGGG
Trigger: GCCCCCTCCCCGGCTCGCCCAGCCAGGACACAGGGA...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGGGCCTGGCCGTTCTGTaGCCGCATCCGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: EASWGSVPELRDAQLGVGGLAVL*PHPRPG
Trigger: ACCCGGACGCGGATGCGGCCACAGAACGGCCAGGCC...CCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp ACGCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTGGCCGCCCTCTGGCTGGACGCTaGCCCCGTGGGCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: TLTCCPAGTLQAWPFCGRPLAGR*PRGHGQ
Trigger: TTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGG...GCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp GCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTTCCGAGGCCTCTGGCTaGACGCTGACCCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ASWGSVPELRDAQLGVGPSEASG*TLTPWA
Trigger: TGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGA...AGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCACCTCTGGCTGGACGCTaGCCCCGTGGGCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: RDAQLGVGPPLSYVQTPPPLAGR*PRGHGQ
Trigger: TTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGG...TGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCTCTGGCTGGACGCTaGCCCCGTGGGCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: APGRPTGSGASTLLRTDTPLAGR*PRGHGQ
Trigger: TTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGG...GGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCGGTGCGACCACGCAGTaGGCTCCGGAGTGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPGATTQ*APECVP
Trigger: CGGGACGCACTCCGGAGCGCACTGCGTGGTCGCACC...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR GCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGGCAGCCCGGGTAGGGTaGGACCACGCAGTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQAARVG*DHAVRS
Trigger: GGAGCGCACTGCGTGGTCGCACCCTACCCGGGCTGC...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR GCA 90 bp GCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCTGCTCAGCCAGGCCTaGACGGTGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: ASWGSVPELRDAQLGVGPLLSQA*TVSSMA
Trigger: GGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAG...AGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp TGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCGTCCTGCTGGGACGCTaGAGGCCTGGCCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WGSVPELRDAQLGVGPPLVLLGR*RPGRSV
Trigger: CACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGAC...GAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGTCCCTGTGTCCTGGCTaGGCGAGCCGGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RPTGSGASTLLRTDTPIGSLCPG*ASRGGG
Trigger: GCCCCCTCCCCGGCTCGCCCAGCCAGGACACAGGGA...CCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp TGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCCACATGCTGTCCTGCTaGGACGCTGCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: WGSVPELRDAQLGVGPPLHMLSC*DAAGLA
Trigger: GGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTG...GAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGCCTCTGGCTGGACGCTaGCCCCGTGGGCACGGGCAA +
Preference number: 4 (lower is better)
Translates to: EVTEASWGSVPELRDAQLPLAGR*PRGHGQ
Trigger: TTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGG...CAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCTTGGGGCTCAGTCCCTaGGCTCCGGGACGCCCAACT +
Preference number: 4 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPLGLSP*APGRPT
Trigger: AGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAA...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCAAACTTCTGCGGGCTaGTCAGCCAGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ASWGSVPELRDAQLGVGPQTSAG*SARPAR
Trigger: CCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTG...AGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCAAACTTCTGCGGGCTaGTCAGCCAGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: EASWGSVPELRDAQLGVGQTSAG*SARPAR
Trigger: CCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTG...CCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTGCTCACATGCTGTCCTaGTGGGACGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSAHMLS*WDAAGL
Trigger: CAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGC...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CGTTCTGTGGCCGCATCCGCGTCCGGGTCCCTGTGTCCTGGCTGGGCGAGCCGGAGGGAAACGCTCACATaGTGTCCTGCTGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: RSVAASASGSLCPGWASRRETLT*CPAGTL
Trigger: CAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCT...CCGGCTCGCCCAGCCAGGACACAGGGACCCGGACGCGGATGCGGCCACAGAACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGTCCGAGGCCTCTGGCTaGACGCTGACCCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQSEASG*TLTPWA
Trigger: TGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGA...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCTCCGAGGCCTCTGGCTaGACGCTGACCCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPSEASG*TLTPWA
Trigger: TGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGA...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTTACATGGGCCACACGTaGCCATCGAAGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSYMGHT*PSKRPG
Trigger: CCCCGGCCTCTTCGATGGCCACGTGTGGCCCATGTA...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp GAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGGGCCTGGCCGTTCTGTaGCCGCATCCGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: EAAARLQRRLGAQSLSSGGLAVL*PHPRPG
Trigger: ACCCGGACGCGGATGCGGCCACAGAACGGCCAGGCC...CCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGGCCTGGCCGTTCTGTaGCCGCATCCGCGTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VTEASWGSVPELRDAQLGGLAVL*PHPRPG
Trigger: ACCCGGACGCGGATGCGGCCACAGAACGGCCAGGCC...TCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp AACGCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTGGCCGGGGACGCTGCAGGCCTaGCCGTTCTGTGGCCGCATC +
Preference number: 4 (lower is better)
Translates to: NAHMLSCWDAAGLAVLWPGTLQA*PFCGRI
Trigger: GATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCC...CGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGGGGACGCTGCAGGCCTaGCCGTTCTGTGGCCGCATC +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQGTLQA*PFCGRI
Trigger: GATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCC...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp TCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACACATGCTGTCCTGCTaGGACGCTGCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SWGSVPELRDAQLGVGPPHMLSC*DAAGLA
Trigger: GGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTG...TGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTTGGTCAGCGTGGTCTTaGCGCCGTTGGTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSWSAWS*RRWSCL
Trigger: GAGGCATGACCAACGGCGGCAAGACCACGCTGACCA...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp TCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACGCACGGGCAAACTTCTaGGGGCTGCTCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLSSGTPNWEWGLHSPTYARANF*GLLSQA
Trigger: GGCCTGGCTGAGCAGCCCGCAGAAGTTTGCCCGTGC...GTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACGGCTGTTGGTCAGCGTaGTCTTGCCGCCGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGAQSLSSGTPNWEWGLHGCWSA*SCRRWS
Trigger: TGACCAACGGCGGCAAGACCACGCTGACCAACAGCC...GTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTTGGACGCTGACCCCGTaGGCACGGGCAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: AQSLSSGTPNWEWGLHSPWTLTP*ARANFC
Trigger: GCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCA...AGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGGGGACGCTGCAGGCCTaGCCGTTCTGTGGCCGCATC +
Preference number: 4 (lower is better)
Translates to: RPTGSGASTLLRTDTPIGGTLQA*PFCGRI
Trigger: GATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCC...CCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp ACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGCACATGCTGTCCTGCTaGGACGCTGCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TEASWGSVPELRDAQLGVHMLSC*DAAGLA
Trigger: GGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTG...CACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACACATGCTGTCCTGCTaGGACGCTGCAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: VPELRDAQLGVGPPLSYVHMLSC*DAAGLA
Trigger: GGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTG...TACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACG +
Preference number: 4 (lower is better)
Translates to: QRRLGAQSLSSGTPNWEWTPNWE*GLHSPT
Trigger: CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT...CCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCTCCGGGACGCCCAACTaGGAGTGGGGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: APGRPTGSGASTLLRTDTSGTPN*EWGLHS
Trigger: AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA...GGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp ACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGTCCGGGACGCCCAACTaGGAGTGGGGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: TEASWGSVPELRDAQLGVSGTPN*EWGLHS
Trigger: AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA...CACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCTCCGATGCCCACGATaGGCTTCATGCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPLRCPR*ASCRCG
Trigger: TCCGCACCGGCATGAAGCTCATCGTGGGCATCGGAG...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR TCA 90 bp GTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTAAGTTGGGCAGGGCTCTaGGCAGGCTGTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: VPELRDAQLGVGPPLSYVSWAGL*AGCWSA
Trigger: CGCTGACCAACAGCCTGCTCAGAGCCCTGCCCAACT...TACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCAAGTTGGGCAGGGCTCTaGGCAGGCTGTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: RDAQLGVGPPLSYVQTPPSWAGL*AGCWSA
Trigger: CGCTGACCAACAGCCTGCTCAGAGCCCTGCCCAACT...TGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTGCACGTCCCACTGTTTaGAGCCGTCTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSARPTV*SRLPQL
Trigger: CAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGC...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATTTGGGGCTCAGTCCCTaGGCTCCGGGACGCCCAACT +
Preference number: 4 (lower is better)
Translates to: GTPNWEWGLHSPTYRHPHLGLSP*APGRPT
Trigger: AGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAA...ATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGTTGGGGCTCAGTCCCTaGGCTCCGGGACGCCCAACT +
Preference number: 4 (lower is better)
Translates to: RPTGSGASTLLRTDTPIGLGLSP*APGRPT
Trigger: AGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAA...CCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACTGCTCAGCCAGGCCTaGACGGTGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: ELRDAQLGVGPPLSYVQTLLSQA*TVSSMA
Trigger: GGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAG...TGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCACAAACTTCTGCGGGCTaGTCAGCCAGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: RDAQLGVGPPLSYVQTPPQTSAG*SARPAR
Trigger: CCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTG...TGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCAAACTTCTGCGGGCTaGTCAGCCAGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LRDAQLGVGPPLSYVQTPQTSAG*SARPAR
Trigger: CCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTG...GGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGCACGGGCAAACTTCTaGGGGCTGCTCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VTEASWGSVPELRDAQLGARANF*GLLSQA
Trigger: GGCCTGGCTGAGCAGCCCGCAGAAGTTTGCCCGTGC...TCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGCACGGGCAAACTTCTaGGGGCTGCTCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EVTEASWGSVPELRDAQLARANF*GLLSQA
Trigger: GGCCTGGCTGAGCAGCCCGCAGAAGTTTGCCCGTGC...CAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGGCTCACATGCTGTCCTaGTGGGACGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAARLQRRLGAQSLSSGTAHMLS*WDAAGL
Trigger: CAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGC...CGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCAGGGAAACGCTCACATaGTGTCCTGCTGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: GSVPELRDAQLGVGPPLSRETLT*CPAGTL
Trigger: CAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCT...GGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTTGGTCTTGCCGCCGTTaGTCATGCCTCCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: AQSLSSGTPNWEWGLHSPWSCRR*SCLRCP
Trigger: TGGGCATCGGAGGCATGACCAACGGCGGCAAGACCA...AGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp GCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTGGCTGTTGGTCAGCGTaGTCTTGCCGCCGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AQSLSSGTPNWEWGLHSPGCWSA*SCRRWS
Trigger: TGACCAACGGCGGCAAGACCACGCTGACCAACAGCC...AGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp TGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCGCACGGTGTCCAGCATaGCCTCCATGTCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: WGSVPELRDAQLGVGPPLARCPA*PPCPET
Trigger: AGTCTCTGGACATGGAGGCCATGCTGGACACCGTGC...GAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCTCCAGGAGGAGGATGTaGGTGTCCGAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPSRRRM*VSEASG
Trigger: GCCAGAGGCCTCGGACACCCACATCCTCCTCCTGGA...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTCCAGGAGGAGGATGTaGGTGTCCGAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: ARLQRRLGAQSLSSGTPNSRRRM*VSEASG
Trigger: GCCAGAGGCCTCGGACACCCACATCCTCCTCCTGGA...GTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGGAGGGGGCTGATTCCTaGGAGCGGTTCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQEGADS*ERFSSE
Trigger: CTCGCTGCTGAACCGCTCCCAGGAATCAGCCCCCTC...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCGAGGGGGCTGATTCCTaGGAGCGGTTCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LRDAQLGVGPPLSYVQTPEGADS*ERFSSE
Trigger: CTCGCTGCTGAACCGCTCCCAGGAATCAGCCCCCTC...GGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp ACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGGGACGCTGCAGGCCTaGCCGTTCTGTGGCCGCATC +
Preference number: 4 (lower is better)
Translates to: TPNWEWGLHSPTYRHPHRGTLQA*PFCGRI
Trigger: GATGCGGCCACAGAACGGCCAGGCCTGCAGCGTCCC...CCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACG +
Preference number: 4 (lower is better)
Translates to: LRDAQLGVGPPLSYVQTPTPNWE*GLHSPT
Trigger: CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT...GGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTAACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACG +
Preference number: 4 (lower is better)
Translates to: VPELRDAQLGVGPPLSYVTPNWE*GLHSPT
Trigger: CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT...TACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp AGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGTCCGGGACGCCCAACTaGGAGTGGGGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: RLQRRLGAQSLSSGTPNWSGTPN*EWGLHS
Trigger: AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA...CCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCGCGTCCCGGCTTCATTaGGAAAACCTGGCGCCTTTA +
Preference number: 4 (lower is better)
Translates to: RLGAQSLSSGTPNWEWGLASRLH*ENLAPL
Trigger: TAAAGGCGCCAGGTTTTCTCAATGAAGCCGGGACGC...GAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR TCA 90 bp CTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGAAGTTGGGCAGGGCTCTaGGCAGGCTGTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LSSGTPNWEWGLHSPTYRSWAGL*AGCWSA
Trigger: CGCTGACCAACAGCCTGCTCAGAGCCCTGCCCAACT...TCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp AGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACAGTTGGGCAGGGCTCTaGGCAGGCTGTTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: SCSEVTEASWGSVPELRDSWAGL*AGCWSA
Trigger: CGCTGACCAACAGCCTGCTCAGAGCCCTGCCCAACT...GTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp ACGCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTGGCCGCGCACGTCCCACTGTTTaGAGCCGTCTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: TLTCCPAGTLQAWPFCGRARPTV*SRLPQL
Trigger: CAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGC...GCGGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR TCA 90 bp GGCCGTTCTGTGGCCGCATCCGCGTCCGGGTCCCTGTGTCCTGGCTGGGCGAGCGACCCAGTTTACTACTaGAGCTGCAGCGAGGTTACA +
Preference number: 4 (lower is better)
Translates to: GRSVAASASGSLCPGWASDPVYY*SCSEVT
Trigger: TGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTC...GCTCGCCCAGCCAGGACACAGGGACCCGGACGCGGATGCGGCCACAGAACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR GCA 90 bp CTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCAGTGCGCTCCGGAGTaGGTCCCGGCTTCATTGAGA +
Preference number: 4 (lower is better)
Translates to: LRDAQLGVGPPLSYVQTPQCAPE*VPASLR
Trigger: TCTCAATGAAGCCGGGACGCACTCCGGAGCGCACTG...GGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR GCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCAGTGCGCTCCGGAGTaGGTCCCGGCTTCATTGAGA +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPQCAPE*VPASLR
Trigger: TCTCAATGAAGCCGGGACGCACTCCGGAGCGCACTG...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR GCA 90 bp AGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCCTCTCGGGACTTCATaGCGTCCAGGTAGACCACTT +
Preference number: 4 (lower is better)
Translates to: RRLGAQSLSSGTPNWEWGPLGTS*RPGRPL
Trigger: AAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGG...GCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp CTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGAGCTCACATGCTGTCCTaGTGGGACGCTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSSGTPNWEWGLHSPTYRAHMLS*WDAAGL
Trigger: CAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGC...TCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCTGGTCTTGCCGCCGTTaGTCATGCCTCCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPWSCRR*SCLRCP
Trigger: TGGGCATCGGAGGCATGACCAACGGCGGCAAGACCA...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp GTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTATGGTCTTGCCGCCGTTaGTCATGCCTCCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: VPELRDAQLGVGPPLSYVWSCRR*SCLRCP
Trigger: TGGGCATCGGAGGCATGACCAACGGCGGCAAGACCA...TACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp AGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACTGGACGCTGACCCCGTaGGCACGGGCAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SCSEVTEASWGSVPELRDWTLTP*ARANFC
Trigger: GCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCA...GTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp AAACGCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTGGCCTGGACGCTGACCCCGTaGGCACGGGCAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: KRSHAVLLGRCRPGRSVAWTLTP*ARANFC
Trigger: GCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCA...GGCCACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp GAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGTACATGGGCCACACGTaGCCATCGAAGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EVTEASWGSVPELRDAQLYMGHT*PSKRPG
Trigger: CCCCGGCCTCTTCGATGGCCACGTGTGGCCCATGTA...CAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR CCA 90 bp GTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGAGGGGGCTGATTCCTaGGAGCGGTTCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: VTEASWGSVPELRDAQLGEGADS*ERFSSE
Trigger: CTCGCTGCTGAACCGCTCCCAGGAATCAGCCCCCTC...TCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp ATAGGGAAACGCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTTGGTCTTGCCGCCGTTaGTCATGCCACCCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: IGKRSHAVLLGRCRPGRSWSCRR*SCHPRP
Trigger: CGGGCGGGGGTGGCATGACCAACGGCGGCAAGACCA...AGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR TCA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCGCGTCCCGGCTTCATTaGGAAAACCTGGCGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPASRLH*ENLAPL
Trigger: TAAAGGCGCCAGGTTTTCTCAATGAAGCCGGGACGC...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR TCA 90 bp GCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGGCACGTCCCACTGTTTaGAGCCGTCTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: AAARLQRRLGAQSLSSGTARPTV*SRLPQL
Trigger: CAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGC...CGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GGCCGTTCTGTGGCCGCATCCGCGTCCGGGTCCCTGTGTCCTGGCTGGGCGAGCTTCAGCAGCGAGTTCTaGATGTCTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: GRSVAASASGSLCPGWASFSSEF*MSSRTS
Trigger: TGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAA...GCTCGCCCAGCCAGGACACAGGGACCCGGACGCGGATGCGGCCACAGAACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR GCA 90 bp ACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCCTGCTCAGCCAGGCCTaGACGGTGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TGSGASTLLRTDTPIGKRLLSQA*TVSSMA
Trigger: GGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAG...GCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp ACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCGCACGGGCAAACTTCTaGGGGCTGCTCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGSGASTLLRTDTPIGKRARANF*GLLSQA
Trigger: GGCCTGGCTGAGCAGCCCGCAGAAGTTTGCCCGTGC...GCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAGTCCTGCTGGGACGCTaGAGGCCTGGCCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PNWEWGLHSPTYRHPHREVLLGR*RPGRSV
Trigger: CACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGAC...TTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp ATAGGGAAACGCTCACATGCTGTCCTGCTGGGACGCTGCAGGCCTGGCCGTTCTGTCCTGCTGGGACGCTaGAGGCCTGGCCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: IGKRSHAVLLGRCRPGRSVLLGR*RPGRSV
Trigger: CACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGAC...AGAACGGCCAGGCCTGCAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR GCA 90 bp CTTCATGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTGAGGCTTCTGCGGGCTaGTCAGCCAGGCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LHAVQVDHFHTVGLHLLPEASAG*SARPAR
Trigger: CCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGCCTC...AGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCATGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR GCA 90 bp GGACTTCATGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGGGTGTCCGAGGCTTCTaGGGGCTGCTCAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLHAVQVDHFHTVGLHLLGVRGF*GLLSQA
Trigger: GGCCTGGCTGAGCAGCCCGCAGAAGCCTCGGACACC...CAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCATGAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp GTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTAGCACGGTGTCCAGCATaGCCTCCATGTCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: VPELRDAQLGVGPPLSYVARCPA*PPCPET
Trigger: AGTCTCTGGACATGGAGGCCATGCTGGACACCGTGC...TACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGGCACGGTGTCCAGCATaGCCTCCATGTCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: AAARLQRRLGAQSLSSGTARCPA*PPCPET
Trigger: AGTCTCTGGACATGGAGGCCATGCTGGACACCGTGC...CGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATATACATGGGCCACACGTaGCCATCGAAGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRPTGSGASTLLRTDTPIYMGHT*PSKRPG
Trigger: CCCCGGCCTCTTCGATGGCCACGTGTGGCCCATGTA...TATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp GCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTTCCTGCCTATACTTCTaGTACATGGGCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: ASWGSVPELRDAQLGVGPSCLYF*YMGHTW
Trigger: CCACGTGTGGCCCATGTACCAGAAGTATAGGCAGGA...AGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp ACAGGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGTCCCTGTGTCCTGGCTaGGCGAGCCGGGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TGPSLLLKLQRGYRGVLGSLCPG*ASRGGG
Trigger: GCCCCCTCCCCGGCTCGCCCAGCCAGGACACAGGGA...CCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAATCCGGGACGCCCAACTaGGAGTGGGGCCTCCACTCT +
Preference number: 4 (lower is better)
Translates to: PNWEWGLHSPTYRHPHRESGTPN*EWGLHS
Trigger: AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA...TTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAACTCCGATGCCCACGATaGGCTTCATGCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PNWEWGLHSPTYRHPHRELRCPR*ASCRCG
Trigger: TCCGCACCGGCATGAAGCTCATCGTGGGCATCGGAG...TTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR TCA 90 bp CTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGAGCACGTCCCACTGTTTaGAGCCGTCTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: LSSGTPNWEWGLHSPTYRARPTV*SRLPQL
Trigger: CAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGC...TCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CTTCATGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTCTGCTCAGCCAGGCCTaGACGGTGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LHAVQVDHFHTVGLHLLPLLSQA*TVSSMA
Trigger: GGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAG...AGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCATGAAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR GCA 90 bp GGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACTTCTCCTCCACTTaGACTCTTCATACGGGACGG +
Preference number: 4 (lower is better)
Translates to: GSVPELRDAQLGVGPPLSYFSST*TLHTGR
Trigger: CCGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTA...GGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp GCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTCAGGGACTGTGTAGTTaGGGGTACTTCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: AQSLSSGTPNWEWGLHSPQGLCS*GYFSST
Trigger: AGTGGAGGAGAAGTACCCGCAACTACACAGTCCCTG...AGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp AACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGGTCCTGCTGGGACGCTaGAGGCCTGGCCGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NWEWGLHSPTYRHPHRETVLLGR*RPGRSV
Trigger: CACAGAACGGCCAGGCCTGCAGCGTCCCAGCAGGAC...CGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp GAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGAGGGAAACGCTCACATaGTGTCCTGCTGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: EVTEASWGSVPELRDAQLRETLT*CPAGTL
Trigger: CAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCT...CAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQAVFPN*YLVLGL
Trigger: CAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGC...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp AGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCACGGTGTCCAGCATaGCCTCCATGTCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SCSEVTEASWGSVPELRDARCPA*PPCPET
Trigger: AGTCTCTGGACATGGAGGCCATGCTGGACACCGTGC...GTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAATGGACGCTGACCCCGTaGGCACGGGCAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: PNWEWGLHSPTYRHPHREWTLTP*ARANFC
Trigger: GCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCA...TTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp ACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCTCCAGGAGGAGGATGTaGGTGTCCGAGGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TGSGASTLLRTDTPIGKRSRRRM*VSEASG
Trigger: GCCAGAGGCCTCGGACACCCACATCCTCCTCCTGGA...GCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAGAGGGGGCTGATTCCTaGGAGCGGTTCAGCAGCGAG +
Preference number: 4 (lower is better)
Translates to: PNWEWGLHSPTYRHPHREEGADS*ERFSSE
Trigger: CTCGCTGCTGAACCGCTCCCAGGAATCAGCCCCCTC...TTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGAGTTACAGAGGCGTCTTaGGGCTCAGTCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSGTPNWEWGLHSPTYRVTEAS*GSVPEL
Trigger: GAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAAC...TCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTTTCAGCAGCGAGTTCTaGATGTCTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSFSSEF*MSSRTS
Trigger: TGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAA...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp AGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCGAAACAGAGGAGCCTTaGAGAAGTCATCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: RRLGAQSLSSGTPNWEWGETEEP*RSHPDG
Trigger: TCCATCAGGATGACTTCTTCAAGGCTCCTCTGTTTC...GCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp ACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCTGGTCAGCGTGGTCTTaGCGCCGTTGGTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: TGSGASTLLRTDTPIGKRWSAWS*RRWSCL
Trigger: GAGGCATGACCAACGGCGGCAAGACCACGCTGACCA...GCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQAVFPN*YLVLGL
Trigger: AAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGC...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR GCA 90 bp GGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCCTGCTCAGCCAGGCCTaGACGGTGTCCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GPSLLLKLQRGYRGVLGLLLSQA*TVSSMA
Trigger: GGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAG...GAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp TCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACCAGGGACTGTGTAGTTaGGGGTACTTCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SVPELRDAQLGVGPPLSYQGLCS*GYFSST
Trigger: AGTGGAGGAGAAGTACCCGCAACTACACAGTCCCTG...GTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTTTGGCCTCCATCTCCTaGCTATACTTCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSLASIS*LYFWYM
Trigger: CATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAA...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp GAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGCCTCTCGGGACTTCATaGCGTCCAGGTAGACCACTT +
Preference number: 4 (lower is better)
Translates to: EAAARLQRRLGAQSLSSGPLGTS*RPGRPL
Trigger: AAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGG...CCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR CCA 90 bp TGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCCCAACTGCTATTTaGTCTTGGGGCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: WGSVPELRDAQLGVGPPLSPTAI*SWGLKK
Trigger: CTTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGA...GAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR CCA 90 bp GCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTTCCCCAACTGCTATTTaGTCTTGGGGCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ASWGSVPELRDAQLGVGPSPTAI*SWGLKK
Trigger: CTTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGA...AGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR CCA 90 bp CTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCTCACATGCTGTCCTTCCGAGGCCTCTGGCTaGACGCTGACCCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LHSPTYRHPHRETLTCCPSEASG*TLTPWA
Trigger: TGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGA...AGGACAGCATGTGAGCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp GCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTCCTGCCTATACTTCTaGTACATGGGCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: ARLQRRLGAQSLSSGTPNSCLYF*YMGHTW
Trigger: CCACGTGTGGCCCATGTACCAGAAGTATAGGCAGGA...GTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR CCA 90 bp CCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGTCCTGCCTATACTTCTaGTACATGGGCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: PELRDAQLGVGPPLSYVQSCLYF*YMGHTW
Trigger: CCACGTGTGGCCCATGTACCAGAAGTATAGGCAGGA...CTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAAACGCCCAACTGGGAGTaGGGCCTCCACTCTCCTACG +
Preference number: 4 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKTPNWE*GLHSPT
Trigger: CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPLKKSS*WITQQL
Trigger: CAACTGCTGCGTGATCCATCAGGATGACTTCTTCAA...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGTTTGGTCTTGGGGCTTaGAGAAGTCATCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QRRLGAQSLSSGTPNWEWFGLGA*RSHPDG
Trigger: TCCATCAGGATGACTTCTTCAAGCCCCAAGACCAAA...CCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR TCA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCTTCAGCAGCGAGTTCTaGATGTCTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPFSSEF*MSSRTS
Trigger: TGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAA...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp ACTCTCCTACGTACAGACACCCCCATAGGGAAACGCTCACATGCTGTCCTGCTGTTGGGGCTCAGTCCCTaGGCTCCGGGACGCCCAACT +
Preference number: 4 (lower is better)
Translates to: TLLRTDTPIGKRSHAVLLLGLSP*APGRPT
Trigger: AGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAA...CAGCAGGACAGCATGTGAGCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR GCA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAATGGTCAGCGTGGTCTTaGCGCCGTTGGTCATGCCTC +
Preference number: 4 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKWSAWS*RRWSCL
Trigger: GAGGCATGACCAACGGCGGCAAGACCACGCTGACCA...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp GGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GTPNWEWGLHSPTYRHPHAVFPN*YLVLGL
Trigger: AAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGC...ATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR GCA 90 bp AGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCAGGGACTGTGTAGTTaGGGGTACTTCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SSGTPNWEWGLHSPTYRHQGLCS*GYFSST
Trigger: AGTGGAGGAGAAGTACCCGCAACTACACAGTCCCTG...GTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp AACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGTGGTCAGCGTGGTCTTaGCGCCGTTGGTCATGCCAC +
Preference number: 4 (lower is better)
Translates to: NWEWGLHSPTYRHPHRETWSAWS*RRWSCH
Trigger: GTGGCATGACCAACGGCGGCAAGACCACGCTGACCA...CGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CCA 90 bp TCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACTATACTTCTGGTACATaGGCCACACGTGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: SLSSGTPNWEWGLHSPTYYTSGT*ATRGHR
Trigger: TCGATGGCCACGTGTGGCCCATGTACCAGAAGTATA...GTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp CCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAGTTACAGAGGCGTCTTaGGGCTCAGTCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PNWEWGLHSPTYRHPHREVTEAS*GSVPEL
Trigger: GAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAAC...TTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp AGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCCTCCGATGCCCACGATaGGCTTCATGCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: SLLLKLQRGYRGVLGLSPLRCPR*ASCRCG
Trigger: TCCGCACCGGCATGAAGCTCATCGTGGGCATCGGAG...GGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR TCA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPLKKSS*WITQQL
Trigger: CAACTGCTGCGTGATCCATCAGGATGACTTCTTCAA...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RDAQLGVGPPLSYVQTPPLKKSS*WITQQL
Trigger: CAACTGCTGCGTGATCCATCAGGATGACTTCTTCAA...TGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp GCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ARLQRRLGAQSLSSGTPNLKKSS*WITQQL
Trigger: CAACTGCTGCGTGATCCATCAGGATGACTTCTTCAA...GTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp AGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACGACCCAGTTTACTACTaGAGCTGCAGCGAGGTTACA +
Preference number: 4 (lower is better)
Translates to: SSGTPNWEWGLHSPTYRHDPVYY*SCSEVT
Trigger: TGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTC...GTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR TCA 90 bp CGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGGACCCAGTTTACTACTaGAGCTGCAGCGAGGTTACA +
Preference number: 4 (lower is better)
Translates to: RPTGSGASTLLRTDTPIGDPVYY*SCSEVT
Trigger: TGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTC...CCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp AGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAATACTTCTCCTCCACTTaGACTCTTCATACGGGACGG +
Preference number: 4 (lower is better)
Translates to: SEVTEASWGSVPELRDAQYFSST*TLHTGR
Trigger: CCGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTA...TTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR GCA 90 bp GGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATTACTTCTCCTCCACTTaGACTCTTCATACGGGACGG +
Preference number: 4 (lower is better)
Translates to: GTPNWEWGLHSPTYRHPHYFSST*TLHTGR
Trigger: CCGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTA...ATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAAAGGGAAACGCTCACATaGTGTCCTGCTGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKRETLT*CPAGTL
Trigger: CAGCGTCCCAGCAGGACAGCATGTGAGCGTTTCCCT...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp GACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATGGGTACATGGGCCACACGTaGCCATCGAAGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: DHFHTVGLHLLPILLVHGYMGHT*PSKRPG
Trigger: CCCCGGCCTCTTCGATGGCCACGTGTGGCCCATGTA...CCCATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp GAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACATATACTTCTGGTACATaGGCCACACGTGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: ELRDAQLGVGPPLSYVQTYTSGT*ATRGHR
Trigger: TCGATGGCCACGTGTGGCCCATGTACCAGAAGTATA...TGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp GACTTCACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCTCCAGGAGGAGGATGTaGGTGTCCGAGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: DFTEELLSGLHAVQVDHFSRRRM*VSEASA
Trigger: CGCAGAAGCCTCGGACACCCACATCCTCCTCCTGGA...GAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTGAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR TCA 90 bp GAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACATTCAGCAGCGAGTTCTaGATGTCTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: ELRDAQLGVGPPLSYVQTFSSEF*MSSRTS
Trigger: TGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAA...TGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACCTCTCGGGACTTCATaGCGTCCAGGTAGACCACTT +
Preference number: 4 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKPLGTS*RPGRPL
Trigger: AAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGG...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp GTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTAACTGCTATTTGGTCTTaGGGCTTGAAGAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: VPELRDAQLGVGPPLSYVTAIWS*GLKKSS
Trigger: GGATGACTTCTTCAAGCCCCAAGACCAAATAGCAGT...TACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR TCA 90 bp CGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGCACGTCCCACTGTTTaGAGCCGTCTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: RPGRPLPHRWPPSPAYTSARPTV*SRLPQL
Trigger: CAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGC...AGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR GCA 90 bp CTTCATGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LHAVQVDHFHTVGLHLLPAVFPN*YLVLGL
Trigger: AAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGC...AGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR GCA 90 bp ACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGTTGGCCTCCATCTCCTaGCTATACTTCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: TPNWEWGLHSPTYRHPHRLASIS*LYFWYM
Trigger: CATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAA...CCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp GACTTCACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCCCTCTCGGGACTTCATaGCGTCCAGGTAGACCACTT +
Preference number: 4 (lower is better)
Translates to: DFTEELLSGLHAVQVDHFPLGTS*RPGRPL
Trigger: AAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGG...GAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp AACAGGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGGCTGTTGGTCAGCGTaGTCTTGCCGCCGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NRTQFTTEAAARLQRRLGGCWSA*SCRRWS
Trigger: TGACCAACGGCGGCAAGACCACGCTGACCAACAGCC...CCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CCA 90 bp CGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGACTGCTATTTGGTCTTaGGGCTTGAAGAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: RPTGSGASTLLRTDTPIGTAIWS*GLKKSS
Trigger: GGATGACTTCTTCAAGCCCCAAGACCAAATAGCAGT...CCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR CCA 90 bp ACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATGGGCGCACGGTGTCCAGCATaGCCTCCATGTCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: TTSTPLASISCLYFWYMGARCPA*PPCPET
Trigger: AGTCTCTGGACATGGAGGCCATGCTGGACACCGTGC...GCCCATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR TCA 90 bp ACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGCGAAACAGAGGAGCCTTaGAGAAGTCATCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: TGSGASTLLRTDTPIGKRETEEP*RSHPDG
Trigger: TCCATCAGGATGACTTCTTCAAGGCTCCTCTGTTTC...GCGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS-3UTR GCA 90 bp ACAGGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGPSLLLKLQRGYRGVLGAVFPN*YLVLGL
Trigger: CAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGC...CCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616156.4
CDS-3UTR CCA 90 bp AACAGGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGTTACAGAGGCGTCTTaGGGCTCAGTCCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NRTQFTTEAAARLQRRLGVTEAS*GSVPEL
Trigger: GAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAAC...CCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR GCA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAATTGGCCTCCATCTCCTaGCTATACTTCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKLASIS*LYFWYM
Trigger: CATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAA...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CCA 90 bp ACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCTTCATTGAGAAAACCTaGCGCCTTTATAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: TEAAARLQRRLGAQSLSSFIEKT*RLYRSR
Trigger: CCGAGACCTATAAAGGCGCCAGGTTTTCTCAATGAA...GGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR CCA 90 bp GACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATGGGTCCTGCCTATACTTCTaGTACATGGGCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: DHFHTVGLHLLPILLVHGSCLYF*YMGHTW
Trigger: CCACGTGTGGCCCATGTACCAGAAGTATAGGCAGGA...CCCATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR TCA 90 bp TGCCGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CRPGRPLPHRWPPSPAYTLKKSS*WITQQL
Trigger: CAACTGCTGCGTGATCCATCAGGATGACTTCTTCAA...AGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR GCA 90 bp GACTTCACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCTTGGCCTCCATCTCCTaGCTATACTTCTGGTACATG +
Preference number: 4 (lower is better)
Translates to: DFTEELLSGLHAVQVDHFLASIS*LYFWYM
Trigger: CATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAA...GAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAATTCATTGAGAAAACCTaGCGCCTTTATAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKFIEKT*RLYRSR
Trigger: CCGAGACCTATAAAGGCGCCAGGTTTTCTCAATGAA...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR TCA 90 bp AGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTTTGGTCTTGGGGCTTaGAGAAGTCATCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: SLLLKLQRGYRGVLGLSPFGLGA*RSHPDG
Trigger: TCCATCAGGATGACTTCTTCAAGCCCCAAGACCAAA...GGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR TCA 90 bp ACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATGGGCTTTGGTCTTGGGGCTTaGAGAAGTCATCCTGATGGA +
Preference number: 4 (lower is better)
Translates to: TTSTPLASISCLYFWYMGFGLGA*RSHPDG
Trigger: TCCATCAGGATGACTTCTTCAAGCCCCAAGACCAAA...GCCCATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR TCA 90 bp CGTCCAGGTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTTTCAGCAGCGAGTTCTaGATGTCTTCCAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: RPGRPLPHRWPPSPAYTSFSSEF*MSSRTS
Trigger: TGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAA...AGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp GACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATGGGTCCCCAACTGCTATTTaGTCTTGGGGCTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: DHFHTVGLHLLPILLVHGSPTAI*SWGLKK
Trigger: CTTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGA...CCCATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR GCA 90 bp GTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATTACTTCTCCTCCACTTaGACTCTTCATACGGGACGG +
Preference number: 4 (lower is better)
Translates to: VDHFHTVGLHLLPILLVHYFSST*TLHTGR
Trigger: CCGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTA...ATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp GTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATTATACTTCTGGTACATaGGCCACACGTGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: VDHFHTVGLHLLPILLVHYTSGT*ATRGHR
Trigger: TCGATGGCCACGTGTGGCCCATGTACCAGAAGTATA...ATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CCA 90 bp GTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATACTGCTATTTGGTCTTaGGGCTTGAAGAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: VDHFHTVGLHLLPILLVHTAIWS*GLKKSS
Trigger: GGATGACTTCTTCAAGCCCCAAGACCAAATAGCAGT...ATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS GCA 90 bp TGCGGAGGGGCGGCGGGGACGACTTCCAAGGCAGCCCGGGTAGGGTaGGACCACGCAGTGCGCTCCGGAGTGCGTCCCGGCTTCATTGAG +
Preference number: 5 (lower is better)
Translates to: CGGAAGTTSKAARVG*DHAVRSGVRPGFIE
Trigger: CTCAATGAAGCCGGGACGCACTCCGGAGCGCACTGCGTGGTCGCACCCTACCCGGGCTGCCTTGGAAGTCGTCCCCGCCGCCCCTCCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS GCA 90 bp GAGGCCTCTGGCTGGACGCTGACCCCGTGGGCACGGGCAAACTTCTaGGGGCTGCTCAGCCAGGCCTGCACGGTGTCCAGCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EASGWTLTPWARANF*GLLSQACTVSSMAS
Trigger: GGAGGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp GGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCGTGGTCTTGCCGCCGTaGGTCATGCCTCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: GSVPELRDAQLGVGPPLSVVLPP*VMPPMP
Trigger: GGGCATCGGAGGCATGACCAACGGCGGCAAGACCAC...GGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp TGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCGTGGTCTTGCCGCCGTaGGTCATGCCTCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: WGSVPELRDAQLGVGPPLVVLPP*VMPPMP
Trigger: GGGCATCGGAGGCATGACCAACGGCGGCAAGACCAC...GAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp AGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCGCTCTGAGCAGGCTGTaGGTCAGCGTGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: RRLGAQSLSSGTPNWEWGALSRL*VSVVLP
Trigger: CGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGC...GCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp CTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACGCTCTGAGCAGGCTGTaGGTCAGCGTGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: LGAQSLSSGTPNWEWGLHALSRL*VSVVLP
Trigger: CGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGC...GTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp GAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGGCTCTGAGCAGGCTGTaGGTCAGCGTGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: EASWGSVPELRDAQLGVGALSRL*VSVVLP
Trigger: CGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGC...CCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp GAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGTGGATCACGCAGCAGTaGGGCAGGGCTCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: EASWGSVPELRDAQLGVGWITQQ*GRALSR
Trigger: CCTGCTCAGAGCCCTGCCCAACTGCTGCGTGATCCA...CCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS GCA 90 bp GAGCAGGAAGCCTTCCAGGAGGAGGATGTGGGTGTCCGAGGCTTCTaGGGGCTGCTCAGCCAGGCCTGCACGGTGTCCAGCATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EQEAFQEEDVGVRGF*GLLSQACTVSSMAS
Trigger: GGAGGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGCCTCGGACACCCACATCCTCCTCCTGGAAGGCTTCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS CCA 90 bp AGGAAGCCTTCCAGGAGGAGGATGTGGGTGTCCGAGGCCTCTGGCTaGACGCTGACCCCGTGGGCACGGGCAAACTTCTGCGGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RKPSRRRMWVSEASG*TLTPWARANFCGLL
Trigger: GAGCAGCCCGCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGACACCCACATCCTCCTCCTGGAAGGCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS CCA 90 bp GAGCAGGAAGCCTTCCAGGAGGAGGATGTGGGTGTCCGAGGCCTCTaGCTGGACGCTGACCCCGTGGGCACGGGCAAACTTCTGCGGGCT +
Preference number: 5 (lower is better)
Translates to: EQEAFQEEDVGVRGL*LDADPVGTGKLLRA
Trigger: AGCCCGCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGACACCCACATCCTCCTCCTGGAAGGCTTCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp CTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCGTGGTCTTGCCGCCGTaGGTCATGCCTCCGATGCCC +
Preference number: 5 (lower is better)
Translates to: LRDAQLGVGPPLSYVQTPVVLPP*VMPPMP
Trigger: GGGCATCGGAGGCATGACCAACGGCGGCAAGACCAC...GGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp CGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCTTGGTCAGCGTGGTCTaGCCGCCGTTGGTCATGCCT +
Preference number: 5 (lower is better)
Translates to: RLGAQSLSSGTPNWEWGLLVSVV*PPLVMP
Trigger: AGGCATGACCAACGGCGGCAAGACCACGCTGACCAA...GAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCTTGGTCAGCGTGGTCTaGCCGCCGTTGGTCATGCCT +
Preference number: 5 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPLVSVV*PPLVMP
Trigger: AGGCATGACCAACGGCGGCAAGACCACGCTGACCAA...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp TCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACTGGATCACGCAGCAGTaGGGCAGGGCTCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLSSGTPNWEWGLHSPTYWITQQ*GRALSR
Trigger: CCTGCTCAGAGCCCTGCCCAACTGCTGCGTGATCCA...GTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp CAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGTTGGTCAGCGTGGTCTaGCCGCCGTTGGTCATGCCA +
Preference number: 5 (lower is better)
Translates to: QRRLGAQSLSSGTPNWEWLVSVV*PPLVMP
Trigger: TGGCATGACCAACGGCGGCAAGACCACGCTGACCAA...CCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CAA 90 bp GAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGTGCGTCCCGGCTTCATaGAGAAAACCTGGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: EASWGSVPELRDAQLGVGCVPAS*RKPGAF
Trigger: AAAGGCGCCAGGTTTTCTCAATGAAGCCGGGACGCA...CCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR CAA 90 bp GGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTGTACTTCTCCTCCACTaGCACTCTTCATACGGGACG +
Preference number: 5 (lower is better)
Translates to: GAQSLSSGTPNWEWGLHSVLLLH*HSSYGT
Trigger: CGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTAC...AGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp TCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCTGCGTCCCGGCTTCATaGAGAAAACCTGGCGCCTTT +
Preference number: 5 (lower is better)
Translates to: SGTPNWEWGLHSPTYRHPCVPAS*RKPGAF
Trigger: AAAGGCGCCAGGTTTTCTCAATGAAGCCGGGACGCA...GGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS-3UTR CAA 90 bp TGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCAACTGCTATTTGGTCTaGGGGCTGAAACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: WGSVPELRDAQLGVGPPLNCYLV*GLKQRS
Trigger: GCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTT...GAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp CCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAAGCTCTGAGCAGGCTGTaGGTCAGCGTGGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: PTGSGASTLLRTDTPIGKALSRL*VSVVLP
Trigger: CGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGC...TTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp GAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGAGCACGTCCCACTGTTaGAAGCCGTCTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: EVTEASWGSVPELRDAQLSTSHC*KPSSPT
Trigger: AGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCT...CAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp GGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGCACGTCCCACTGTTaGAAGCCGTCTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: GTPNWEWGLHSPTYRHPHSTSHC*KPSSPT
Trigger: AGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCT...ATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp GAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGAGCACGTCCCACTGTTaGAAGCCGTCTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: EAAARLQRRLGAQSLSSGSTSHC*KPSSPT
Trigger: AGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCT...CCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp TCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACTTCTCCTCCACTaGCACTCTTCATACGGGACG +
Preference number: 5 (lower is better)
Translates to: SVPELRDAQLGVGPPLSYVLLLH*HSSYGT
Trigger: CGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTAC...GTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp TCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACGTACTTCTCCTCCACTaGCACTCTTCATACGGGACG +
Preference number: 5 (lower is better)
Translates to: SLSSGTPNWEWGLHSPTYVLLLH*HSSYGT
Trigger: CGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTAC...GTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp AACAGGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGTGGTCTTGCCGCCGTaGGTCATGCCACCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: NRTQFTTEAAARLQRRLGVVLPP*VMPPPP
Trigger: GGGCGGGGGTGGCATGACCAACGGCGGCAAGACCAC...CCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS-3UTR CAA 90 bp AACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCATAGGGAAACGTTGGTCAGCGTGGTCTaGCCGCCGTTGGTCATGCCT +
Preference number: 5 (lower is better)
Translates to: NWEWGLHSPTYRHPHRETLVSVV*PPLVMP
Trigger: AGGCATGACCAACGGCGGCAAGACCACGCTGACCAA...CGTTTCCCTATGGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp TCTTGGGGCTCAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCATTCCCCAACTGCTATTaGGTCTTGGGGCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SWGSVPELRDAQLGVGPPFPNCY*VLGLEE
Trigger: TTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGAA...TGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTGAGCCCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR CAA 90 bp AGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGGATCACGCAGCAGTaGGGCAGGGCTCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SLLLKLQRGYRGVLGLSPWITQQ*GRALSR
Trigger: CCTGCTCAGAGCCCTGCCCAACTGCTGCGTGATCCA...GGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp CAGTCCCTGAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGAACTGCTATTTGGTCTaGGGGCTTGAAGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: QSLSSGTPNWEWGLHSPTNCYLV*GLEEVI
Trigger: GATGACTTCTTCAAGCCCCAAGACCAAATAGCAGTT...CGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTCAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR CAA 90 bp CCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACACCCCCAACTGCTATTTGGTCTaGGGGCTTGAAGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: PGRPTGSGASTLLRTDTPNCYLV*GLEEVI
Trigger: GATGACTTCTTCAAGCCCCAAGACCAAATAGCAGTT...GGGGGTGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS-3UTR CAA 90 bp GAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCTCCGGGAACTGCTATTTGGTCTaGGGGCTGAAACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: EAAARLQRRLGAQSLSSGNCYLV*GLKQRS
Trigger: GCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTT...CCCGGAGCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616156.4
CDS-3UTR CAA 90 bp GAGCTCCGGGACGCCCAACTGGGAGTGGGGCCTCCACTCTCCTACGTACAGACATTCCCCAACTGCTATTaGGTCTTGGGGCTGAAACAG +
Preference number: 5 (lower is better)
Translates to: ELRDAQLGVGPPLSYVQTFPNCY*VLGLKQ
Trigger: CTGTTTCAGCCCCAAGACCAAATAGCAGTTGGGGAA...TGTCTGTACGTAGGAGAGTGGAGGCCCCACTCCCAGTTGGGCGTCCCGGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp AACAGGACCCAGTTTACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGTGGATCACGCAGCAGTaGGGCAGGGCTCTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NRTQFTTEAAARLQRRLGWITQQ*GRALSR
Trigger: CCTGCTCAGAGCCCTGCCCAACTGCTGCGTGATCCA...CCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGTAAACTGGGTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp ACTACTGAAGCTGCAGCGAGGTTACAGAGGCGTCTTGGGGCTCAGTCCCTGAGCAGCACGTCCCACTGTTaGAAGCCGTCTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: TTEAAARLQRRLGAQSLSSTSHC*KPSSPT
Trigger: AGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCT...GCTCAGGGACTGAGCCCCAAGACGCCTCTGTAACCTCGCTGCAGCTTCAGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000599576.5
ENST00000616156.4
CDS-3UTR CAA 90 bp ACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATGGGCGTACTTCTCCTCCACTaGCACTCTTCATACGGGACG +
Preference number: 5 (lower is better)
Translates to: TTSTPLASISCLYFWYMGVLLLH*HSSYGT
Trigger: CGTCCCGTATGAAGAGTGCAAGTGGAGGAGAAGTAC...GCCCATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS GCA 90 bp CAGAGACTCCAGCACGTCCCACTGTTTGAAGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTGAAACAGAGGAGCCTTGAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: QRLQHVPLFEAVFPN*YLVLGLKQRSLEEV
Trigger: GACTTCTTCAAGGCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCTGGAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS-3UTR CAA 90 bp CACGGAAGAGCTCCTCTCGGGACTTCATGCCGTCCAGGTAGACCACTTCCACACAACTGCTATTTGGTCTaGGGGCTTGAAGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: HGRAPLGTSCRPGRPLPHNCYLV*GLEEVI
Trigger: GATGACTTCTTCAAGCCCCAAGACCAAATAGCAGTT...GTGTGGAAGTGGTCTACCTGGACGGCATGAAGTCCCGAGAGGAGCTCTTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CAA 90 bp GTAGACCACTTCCACACCGTTGGCCTCCATCTCCTGCCTATACTTCTGGTACATAGCACGTCCCACTGTTaGAAGCCGTCTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: VDHFHTVGLHLLPILLVHSTSHC*KPSSPT
Trigger: AGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCT...ATGTACCAGAAGTATAGGCAGGAGATGGAGGCCAACGGTGTGGAAGTGGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS-3UTR CAA 90 bp CCTGGGAGCGGTTCAGCAGCGAGTTCTGAATGTCTTCCAGGACTTCACGGAAGATTCCCCAACTGCTATTaGGTCTTGGGGCTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PGSGSAASSECLPGLHGRFPNCY*VLGLEE
Trigger: TTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGAA...TCTTCCGTGAAGTCCTGGAAGACATTCAGAACTCGCTGCTGAACCGCTCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597889.1
CDS GCA 72 bp GCGGCGGGGACGACTTCCAAGGCAGCCCGGGTAGGGTaGGACCACGCAGTGCGCTCCGGAGTGCGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: AAGTTSKAARVG*DHAVRSGVRPG
Trigger: GCCGGGACGCACTCCGGAGCGCACTGCGTGGTCGCACCCTACCCGGGCTGCCTTGGAAGTCGTCCCCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS GCA 72 bp GGCTGGACGCTGACCCCGTGGGCACGGGCAAACTTCTaGGGGCTGCTCAGCCAGGCCTGCACGGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GWTLTPWARANF*GLLSQACTVSS
Trigger: GCTGGACACCGTGCAGGCCTGGCTGAGCAGCCCGCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS TCA 72 bp TCTTGCCGCCGTTGGTCATGCCTCCGATGCCCACGATaGGCTTCATGCCGGTGCGGAGGGGCGGCGGGGACG +
Preference number: 6 (lower is better)
Translates to: SCRRWSCLRCPR*ASCRCGGAAGT
Trigger: CGTCCCCGCCGCCCCTCCGCACCGGCATGAAGCTCATCGTGGGCATCGGAGGCATGACCAACGGCGGCAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS CAA 72 bp GGCAGGGCTCTGAGCAGGCTGTTGGTCAGCGTGGTCTaGCCGCCGTTGGTCATGCCACCCCCGCCCGCACAG +
Preference number: 6 (lower is better)
Translates to: GRALSRLLVSVV*PPLVMPPPPAQ
Trigger: CTGTGCGGGCGGGGGTGGCATGACCAACGGCGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGCCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS CCA 72 bp GCGGGCTGCTCAGCCAGGCCTGCACGGTGTCCAGCATaGCCTCCATGTCCAGAGACTCCAGCACGTCCCACT +
Preference number: 6 (lower is better)
Translates to: AGCSARPARCPA*PPCPETPARPT
Trigger: AGTGGGACGTGCTGGAGTCTCTGGACATGGAGGCCATGCTGGACACCGTGCAGGCCTGGCTGAGCAGCCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000597889.1
ENST00000599576.5
ENST00000616156.4
CDS CCA 72 bp TCCAGGAGGAGGATGTGGGTGTCCGAGGCCTCTGGCTaGACGCTGACCCCGTGGGCACGGGCAAACTTCTGC +
Preference number: 6 (lower is better)
Translates to: SRRRMWVSEASG*TLTPWARANFC
Trigger: GCAGAAGTTTGCCCGTGCCCACGGGGTCAGCGTCCAGCCAGAGGCCTCGGACACCCACATCCTCCTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000599576.5
ENST00000616156.4
CDS CAA 72 bp GGCAGGGCTCTGAGCAGGCTGTTGGTCAGCGTGGTCTaGCCGCCGTTGGTCATGCCTCCGATGCCCACGATG +
Preference number: 6 (lower is better)
Translates to: GRALSRLLVSVV*PPLVMPPMPTM
Trigger: CATCGTGGGCATCGGAGGCATGACCAACGGCGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGCCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS CCA 72 bp CGCTCCGGAGTGCGTCCCGGCTTCATTGAGAAAACCTaGCGCCTTTATAGGTCTCGGCAGCCTGGAGGCCGC +
Preference number: 6 (lower is better)
Translates to: RSGVRPGFIEKT*RLYRSRQPGGR
Trigger: GCGGCCTCCAGGCTGCCGAGACCTATAAAGGCGCCAGGTTTTCTCAATGAAGCCGGGACGCACTCCGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS CAA 72 bp ATCACGCAGCAGTTGGGCAGGGCTCTGAGCAGGCTGTaGGTCAGCGTGGTCTTGCCGCCGTTGGTCATGCCT +
Preference number: 6 (lower is better)
Translates to: ITQQLGRALSRL*VSVVLPPLVMP
Trigger: AGGCATGACCAACGGCGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGCCCTGCCCAACTGCTGCGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000593949.1
ENST00000616156.4
CDS CAA 72 bp ATCACGCAGCAGTTGGGCAGGGCTCTGAGCAGGCTGTaGGTCAGCGTGGTCTTGCCGCCGTTGGTCATGCCA +
Preference number: 6 (lower is better)
Translates to: ITQQLGRALSRL*VSVVLPPLVMP
Trigger: TGGCATGACCAACGGCGGCAAGACCACGCTGACCAACAGCCTGCTCAGAGCCCTGCCCAACTGCTGCGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599576.5
CDS CAA 72 bp ACCACGCAGTGCGCTCCGGAGTGCGTCCCGGCTTCATaGAGAAAACCTGGCGCCTTTATAGGTCTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: TTQCAPECVPAS*RKPGAFIGLGS
Trigger: GCTGCCGAGACCTATAAAGGCGCCAGGTTTTCTCAATGAAGCCGGGACGCACTCCGGAGCGCACTGCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000616156.4
CDS TCA 72 bp ACTGCTATTTGGTCTTGGGGCTTGAAGAAGTCATCCTaGTGGATCACGCAGCAGTTGGGCAGGGCTCTGAGC +
Preference number: 6 (lower is better)
Translates to: TAIWSWGLKKSS*WITQQLGRALS
Trigger: GCTCAGAGCCCTGCCCAACTGCTGCGTGATCCATCAGGATGACTTCTTCAAGCCCCAAGACCAAATAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000168977.6
ENST00000599576.5
CDS GCA 72 bp CAGCACGTCCCACTGTTTGAAGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTGAAACAGAGGAGCCTT +
Preference number: 6 (lower is better)
Translates to: QHVPLFEAVFPN*YLVLGLKQRSL
Trigger: AAGGCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS CAA 90 bp CTCCAGCACGTCCCACTGTTTGAAGCCGTCTTCCCCAACTGCTATTaGGTCTTGGGGCTGAAACAGAGGAGCCTTGAAGAAGTCATCCTG +
Preference number: 6 (lower is better)
Translates to: LQHVPLFEAVFPNCY*VLGLKQRSLEEVIL
Trigger: CAGGATGACTTCTTCAAGGCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS GCA 72 bp CAGCACGTCCCACTGTTTGAAGCCGTCTTCCCCAACTaGTATTTGGTCTTGGGGCTTGAAGAAGTCATCCTG +
Preference number: 6 (lower is better)
Translates to: QHVPLFEAVFPN*YLVLGLEEVIL
Trigger: CAGGATGACTTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAGTGGGACGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000597889.1
ENST00000599576.5
CDS CAA 72 bp GTCCCACTGTTTGAAGCCGTCTTCCCCAACTGCTATTaGGTCTTGGGGCTGAAACAGAGGAGCCTTGAAGAA +
Preference number: 6 (lower is better)
Translates to: VPLFEAVFPNCY*VLGLKQRSLEE
Trigger: TTCTTCAAGGCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4
CDS CAA 72 bp GTCCCACTGTTTGAAGCCGTCTTCCCCAACTGCTATTaGGTCTTGGGGCTTGAAGAAGTCATCCTGATGGAT +
Preference number: 6 (lower is better)
Translates to: VPLFEAVFPNCY*VLGLEEVILMD
Trigger: ATCCATCAGGATGACTTCTTCAAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAGTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000168977.6
ENST00000597889.1
ENST00000599576.5
CDS CAA 72 bp CTGTTTGAAGCCGTCTTCCCCAACTGCTATTTGGTCTaGGGGCTGAAACAGAGGAGCCTTGAAGAAGTCATC +
Preference number: 6 (lower is better)
Translates to: LFEAVFPNCYLV*GLKQRSLEEVI
Trigger: GATGACTTCTTCAAGGCTCCTCTGTTTCAGCCCCAAGACCAAATAGCAGTTGGGGAAGACGGCTTCAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593949.1
ENST00000616156.4