RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NMRAL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153406, ENSG00000274684

Ensembl transcript IDs: ENST00000283429.11, ENST00000404295.7, ENST00000571291.5, ENST00000571448.5, ENST00000572110.1, ENST00000572232.5, ENST00000572391.1, ENST00000572559.1, ENST00000573520.5, ENST00000573533.1, ENST00000573571.1, ENST00000574425.5, ENST00000574733.5, ENST00000575002.5, ENST00000575557.5, ENST00000575995.1, ENST00000576176.1, ENST00000576935.5, ENST00000616587.2, ENST00000621810.4, ENST00000631694.1, ENST00000631867.1, ENST00000631933.1, ENST00000632013.1, ENST00000632014.1, ENST00000632129.1, ENST00000632220.1, ENST00000632279.1, ENST00000632312.1, ENST00000632825.1, ENST00000633085.1, ENST00000633322.1, ENST00000633784.1, ENST00000633905.1, ENST00000634127.1, ENST00000634144.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTaGCCAGGTCCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCT +
Preference number: 1 (lower is better)
Translates to: ARCHGRVSGHRNGTC*PGPGHRESQAFRSP
Trigger: AGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR CCA 90 bp CTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LPFAVKVRGGQSPCRQLLGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...AAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
3UTR-3UTR GCA 90 bp ACCTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCCCCTGCTTGACCTCCTaGTCCTGGCTGCAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: TSPLPSKCAAANLPAVSFPCLTS*SWLQLS
Trigger: GGAGAGCTGCAGCCAGGAGCAGGAGGTCAAGCAGGG...GAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
3UTR-3UTR GCA 90 bp GACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 2 (lower is better)
Translates to: DPGQTRTCHPWERHLWASPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...GCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR CCA 90 bp GCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCAGAAACGGAACATGTTaGCCAGGTCCCGGGCACCGG +
Preference number: 2 (lower is better)
Translates to: AARRAGHSRLKSPLCCSSRNGTC*PGPGHR
Trigger: CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCT...GCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR GCA 90 bp GGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACGCCCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 2 (lower is better)
Translates to: GEEVLKIAGQPHTGHGNAPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...GGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
3UTR-3UTR CCA 90 bp GGCATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCAGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: GIFKRLSTTGPRSDTDMPGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...TGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR GCA 90 bp TTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCCATCTTCCAGGAGTGTaGGGGCCACGGAGCCACCCT +
Preference number: 2 (lower is better)
Translates to: LPSKCAAANLPAVSFLMFHLPGV*GPRSHP
Trigger: AGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATG...GAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGCCTCAGGAGTCATCTTaGCTCCTATGGCCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLPQESS*LLWPSP
Trigger: AGGAGAGGGCCATAGGAGCCAAGATGACTCCTGAGG...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR CAA 90 bp TCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: SFAAFFLGFRVTTRT*NVPSSRSVRATEPP
Trigger: GGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR GCA 90 bp CAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGAGATGTTGGTGCCTCTaGCCCTCTGGTGCCCCCGAT +
Preference number: 2 (lower is better)
Translates to: QLDVTVGSQGIETEHVGQRCWCL*PSGAPD
Trigger: ATCGGGGGCACCAGAGGGGCAGAGGCACCAACATCT...CTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR GCA 90 bp GACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 2 (lower is better)
Translates to: DPGQTRTCHPWERHLWASGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...GCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR GCA 90 bp GGCATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCACCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 2 (lower is better)
Translates to: GIFKRLSTTGPRSDTDMPPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...TGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR GCA 90 bp CAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTCCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 2 (lower is better)
Translates to: QTRTCHPWERHLWASSASPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...ACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR CCA 90 bp GGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGGAAATCATCTTGGCTCCTATaGCCCTCTCCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: GSQGIETEHVGQVPGTGKSSWLL*PSPPGS
Trigger: GCTTCCAGGAGGAGAGGGCCATAGGAGCCAAGATGA...TTTCCCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR GCA 90 bp CGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCTTATTCAGATGTTGGTaGCTCTGCCCCTCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: RAGHSRLKSPLCCSSHWSLFRCW*LCPSGA
Trigger: GGCACCAGAGGGGCAGAGGCACCAACATCTGAATAA...GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR GCA 90 bp GGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACGCCGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 2 (lower is better)
Translates to: GEEVLKIAGQPHTGHGNAGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...GGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
3UTR-3UTR GCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGCCTCAGCTCCTTTGCTaGCTTCTTCCTAGGGTTTCG +
Preference number: 2 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMPQLLC*LLPRVS
Trigger: CGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTGAGG...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR GCA 90 bp GGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACGCCTCCCTGCACTACTTCTaGACCTTGCAGCCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GEEVLKIAGQPHTGHGNASLHYF*TLQPQL
Trigger: GAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGA...GGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp GGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCCTCAGGAGTCATCTTaGCTCCTATGGCCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: GRSQQVEVPFVLFQPLVQPQESS*LLWPSP
Trigger: AGGAGAGGGCCATAGGAGCCAAGATGACTCCTGAGG...CTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR GCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAAAACCCCGAAGGGAGTaGTCCACCACAGCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEKPRRE*STTARS
Trigger: GCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTT...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR GCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTCATCTTGGTCTCCCTaGACTACTTCTGCACCTTGC +
Preference number: 2 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMSSWSP*TTSAPC
Trigger: GCAAGGTGCAGAAGTAGTGCAGGGAGACCAAGATGA...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp CATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCATCAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 2 (lower is better)
Translates to: HLQKAEHHRTQVRHGHAIRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...GATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR CCA 90 bp CTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCTCATCTTGGCTCCTATaGCCCTCTCCTCCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: LDVTVGSQGIETEHVGQVSSWLL*PSPPGS
Trigger: GCTTCCAGGAGGAGAGGGCCATAGGAGCCAAGATGA...GACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR GCA 90 bp GCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGCCTCAGCTCCTTTGCTaGCTTCTTCCTAGGGTTTCG +
Preference number: 2 (lower is better)
Translates to: ALPVIGHDEGGVSPIQGQPQLLC*LLPRVS
Trigger: CGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTGAGG...CTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAAGCTCCATGATGACCTaGTCATCTTGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWESSMMT*SSWSPC
Trigger: GCAGGGAGACCAAGATGACCAGGTCATCATGGAGCT...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp GCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGATGACCTGGTCATCTTaGTCTCCCTGCACTACTTCT +
Preference number: 2 (lower is better)
Translates to: ALPVIGHDEGGVSPIQGQMTWSS*SPCTTS
Trigger: AGAAGTAGTGCAGGGAGACCAAGATGACCAGGTCAT...CTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CCA 90 bp CATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCATCTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 2 (lower is better)
Translates to: HLQKAEHHRTQVRHGHAIFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...GATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR CAA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTCCAGCGTCAGGGCCTaGGGGTTGAGTCTCAGGGTC +
Preference number: 3 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLSSVRA*GLSLRV
Trigger: GACCCTGAGACTCAACCCCAAGGCCCTGACGCTGGA...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR TCA 72 bp CACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTaGAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCA +
Preference number: 3 (lower is better)
Translates to: HKGPRGGQVTAG*SPLCAVPATGP
Trigger: TGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR GCA 72 bp AGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTaGTGTTCCAGCCACTGGTCCAGCGTCAGGGCCTTG +
Preference number: 3 (lower is better)
Translates to: RRAGHSRLKSPL*CSSHWSSVRAL
Trigger: CAAGGCCCTGACGCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR CAA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGGGCTTTATTCAGATGTaGGTGCCTCTGCCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRGFIQM*VPLPLW
Trigger: CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCC...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR TCA 72 bp GCTCCTGGCTGCAGCTCTCCCAGTAATTGGTCACGATaGAGGTGGCGTAAGCCCCATTCAGGGCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: APGCSSPSNWSR*RWRKPHSGPAP
Trigger: TGGAGCTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGCTGCAGCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR CCA 72 bp CCACAGGACCCAGGTCAGACACGGACATGCCATCCATaGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGC +
Preference number: 3 (lower is better)
Translates to: PQDPGQTRTCHP*ERHLWASSASS
Trigger: GCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR CAA 90 bp CGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCGGCTTTATTCAGATGTaGGTGCCTCTGCCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: RAGHSRLKSPLCCSSHWSGFIQM*VPLPLW
Trigger: CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCC...GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR CAA 90 bp GATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGTCCTCAGGAGTCATCTaGGCTCCTATGGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: DVTVGSQGIETEHVGQVPSSGVI*APMALS
Trigger: GGAGAGGGCCATAGGAGCCAAGATGACTCCTGAGGA...CGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR-3UTR CAA 90 bp GGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGTCCTCAGGAGTCATCTaGGCTCCTATGGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: GRSQQVEVPFVLFQPLVQSSGVI*APMALS
Trigger: GGAGAGGGCCATAGGAGCCAAGATGACTCCTGAGGA...CTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
3UTR CCA 72 bp ACCTGTGGGCAAGCTCAGCAAGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAAGTGGGAGAGGAGGTT +
Preference number: 3 (lower is better)
Translates to: TCGQAQQVALSV*GFLGQEVGEEV
Trigger: AACCTCCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTACTTGCTGAGCTTGCCCACAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
3UTR-3UTR CAA 90 bp CTCCCTGCACTACTTCTGCACCTTGCAGCCTCAGCTCCTTTGCTGCCTTCTTCCGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: LPALLLHLAASAPLLPSSVTTRT*NVPSSR
Trigger: CCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGAC...GGAAGAAGGCAGCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR-3UTR CAA 90 bp GCTGCAGCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGCACTACTTCTGCACCTaGCAGCCTCAGCTCCTTTGC +
Preference number: 3 (lower is better)
Translates to: AAALPVIGHDEGGVSPIQHYFCT*QPQLLC
Trigger: GCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTG...CTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR GCA 72 bp CACTACTTCTGCACCTTGCAGCCTCAGCTCCTTTGCTaGCTTCTTCCTAGGGTTTCGGGTCACCACTCGAAC +
Preference number: 3 (lower is better)
Translates to: HYFCTLQPQLLC*LLPRVSGHHSN
Trigger: GTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
3UTR CCA 72 bp AGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGTCCCGGAAATATTCCT +
Preference number: 3 (lower is better)
Translates to: RGGSQNSRAAAH*SWERQCPGNIP
Trigger: AGGAATATTTCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp CCGATCCCCACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PIPTRGREAGRSQQVEVPGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...GGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGTGGGGATCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ACCTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCG +
Preference number: 4 (lower is better)
Translates to: TSPLPSKCAAANLPAVSFASEDP*LQPPIP
Trigger: CGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGC...GAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
3UTR CAA 72 bp CCACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTaGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: PQGAARRAGHSR*KSPLCCSSHWS
Trigger: GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp CACCACTCGAACCTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCCGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGT +
Preference number: 4 (lower is better)
Translates to: HHSNLECPIFQECAGHGARRTPG*SRQSRR
Trigger: ACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCG...GGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp CAGCGAGCAGCTTCCCCTGAAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTCGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGT +
Preference number: 4 (lower is better)
Translates to: QRAASPESPTEGRNPEGSRRTPG*SRQSRR
Trigger: ACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCG...ACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTTCAGGGGAAGCTGCTCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCCTGGGCACCCATCTTCCAGGAGTGTaGGGGCCACGGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LECPIFQECAGHGATLGTHLPGV*GPRSHP
Trigger: AGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATG...GGTGCCCAGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp GCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCCTCGGCCGTGTGCCTaGAAGTGCTCAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: AARRAGHSRLKSPLCCSSPRPCA*KCSARC
Trigger: ACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGG...GCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCAGGAGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LKGETPKGVLHHSKEHPGGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...TCCTGGATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp GTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: VPLKGETPKGVLHHSKEHPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...ATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGGAACCTCGGCCGTGTGCCTaGAAGTGCTCAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: RVSGHRNGTCWPGPGHREPRPCA*KCSARC
Trigger: ACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGG...TTCCCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp GGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGAGATGTTGGTGCCTCTaGCCCTCTGGTGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: GREAGRSQQVEVPFVLFQRCWCL*PSGAPD
Trigger: ATCGGGGGCACCAGAGGGGCAGAGGCACCAACATCT...CTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ACCACAGGACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TTGPRSDTDMPSMGTSPVGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...CACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACGCCGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GEEVLKIAGQPHTGHGNAGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...GGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp GCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGHSRLKSPLCCSSHWSSGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...GCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCCTGGGCACCGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LECPIFQECAGHGATLGTAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...GGTGCCCAGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGCCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGAGAAACGGAACATGTTaGCCAGGTCCCGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLRNGTC*PGPGHR
Trigger: CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCT...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp CAGCGAGCAGCTTCCCCTGAAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTCCGCTGAGCAGAGCCTaGGCCTGCAACCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QRAASPESPTEGRNPEGSPLSRA*ACNLQR
Trigger: TCTCTGGAGGTTGCAGGCTCAGGCTCTGCTCAGCGG...ACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTTCAGGGGAAGCTGCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp GACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCCCGCTGAGCAGAGCCTaGGCCTGCAACCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DPGQTRTCHPWERHLWASPLSRA*ACNLQR
Trigger: TCTCTGGAGGTTGCAGGCTCAGGCTCTGCTCAGCGG...GCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp GGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACGCCCGGGTGATGACCCGCTaGGCAGAGCCTGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GEEVLKIAGQPHTGHGNARVMTR*AEPEPA
Trigger: TGCAGGCTCAGGCTCTGCTCAGCGGGTCATCACCCG...GGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp GGCATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCACGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGT +
Preference number: 4 (lower is better)
Translates to: GIFKRLSTTGPRSDTDMPRRTPG*SRQSRR
Trigger: ACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCG...TGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CACCACTCGAACCTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCCCCTGCTTGACCTCCTaGTCCTGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HHSNLECPIFQECAGHGAPCLTS*SWLQLS
Trigger: GGAGAGCTGCAGCCAGGAGCAGGAGGTCAAGCAGGG...GGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp AAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KVPLKGETPKGVLHHSKEPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...CTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp GAAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGACGTCGTTTCCGGGTTTaGCCGCCCCAGGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: ESPTEGRNPEGSAPPQQGRRFRV*PPQARA
Trigger: TGCACGTGCCTGGGGCGGGCAAACCCGGAAACGACG...TCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCG +
Preference number: 4 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEASEDP*LQPPIP
Trigger: CGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGC...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp GTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATTCCGGTCCAGAGATCTaGCAGAGCGCCGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: VPLKGETPKGVLHHSKEHSGPEI*QSAAHG
Trigger: TCCGTGAGCGGCGCTCTGCCAGATCTCTGGACCGGA...ATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp TTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FRVTTRTLNVPSSRSVRAGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...GGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp GCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: AARRAGHSRLKSPLCCSSRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...GCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCCTGGGCACCAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: LECPIFQECAGHGATLGTRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...GGTGCCCAGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGCGGACATGCCATCCATaGGAACGTCACCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLRTCHP*ERHLWA
Trigger: TGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCCTGGGCACCGCCACGGAGCCACCCTaGGCACCCTTAAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: LECPIFQECAGHGATLGTATEPP*APLRFC
Trigger: GCAAAATCTTAAGGGTGCCCAGGGTGGCTCCGTGGC...GGTGCCCAGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp ACCTGTGGGCAAGCTCAGCAAGTAGCTCTTTCCGTCTGGGGCTTTCTGGGGCAAGCAGTTGGCTCCTCCTaGATCCCGCGGGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: TCGQAQQVALSVWGFLGQAVGSS*IPRDSA
Trigger: CGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGC...TTGCCCCAGAAAGCCCCAGACGGAAAGAGCTACTTGCTGAGCTTGCCCACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GGGCAAGCTCAGCAAGTAGCTCTTTCCGTCTGGGGCTTTCTGGGGCAAGAAGTGGCAGTTGGCTCCTCCTaGATCCCGCGGGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: GQAQQVALSVWGFLGQEVAVGSS*IPRDSA
Trigger: CGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGC...CACTTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTACTTGCTGAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGGGCCAGTTAGCTCCTTaGCATCGTGCACGACCTTGC +
Preference number: 4 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRGQLAP*HRARPC
Trigger: GCAAGGTCGTGCACGATGCCAAGGAGCTAACTGGCC...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp GGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGGCATCTTCAAAAGGCTaGGCACCACAGGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: GREAGRSQQVEVPFVLFQASSKG*APQDPG
Trigger: ACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGC...CTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp GGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GRSQQVEVPFVLFQPLVQCGCAW*AGQRTP
Trigger: AGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCA...CTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp CGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTCGGGTGATGACCCGCTaGGCAGAGCCTGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RTCHPWERHLWASSASSSRVMTR*AEPEPA
Trigger: TGCAGGCTCAGGCTCTGCTCAGCGGGTCATCACCCG...AGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTCCCACCGGCTGGAGTaGCCTCCTCGCCGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSHRLE*PPRRGL
Trigger: CAGGCCGCGGCGAGGAGGTCACTCCAGCCGGTGGGA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR GCA 90 bp CAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QLDVTVGSQGIETEHVGQPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...CTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp ACCTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCGGTCAGACACGGACATaGCATCCATGGGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: TSPLPSKCAAANLPAVSFGQTRT*HPWERH
Trigger: GTGACGTTCCCATGGATGGCATGTCCGTGTCTGACC...GAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCTACTCCTCGGCCGTGTaGCTGCAAGTGCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PGHRESQAFRSPQESSWLYSSAV*LQVLSP
Trigger: CGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTA...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp GATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGTACTCCTCGGCCGTGTaGCTGCAAGTGCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: DVTVGSQGIETEHVGQVPYSSAV*LQVLSP
Trigger: CGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTA...CGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp CAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTCGTCGTTTCCGGGTTTaGCCGCCCCAGGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: QTRTCHPWERHLWASSASRRFRV*PPQARA
Trigger: TGCACGTGCCTGGGGCGGGCAAACCCGGAAACGACG...ACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp ACCACAGGACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGTCCGGTCCAGAGATCTaGCAGAGCGCCGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: TTGPRSDTDMPSMGTSPVSGPEI*QSAAHG
Trigger: TCCGTGAGCGGCGCTCTGCCAGATCTCTGGACCGGA...CACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCTCCAGTCCGGTCCAGAGATCTaGCAGAGCGCCGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: VKVRGGQSPCRQLLDVLQSGPEI*QSAAHG
Trigger: TCCGTGAGCGGCGCTCTGCCAGATCTCTGGACCGGA...CTGGAGAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp CAGCGAGCAGCTTCCCCTGAAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: QRAASPESPTEGRNPEGSAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...ACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTTCAGGGGAAGCTGCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGCCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp GGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGTGGGAACGTCACCTGTaGGCAAGCTCAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GREAGRSQQVEVPFVLFQWERHL*ASSASS
Trigger: GCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCA...CTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTCATCTTGGCTCCTATaGCCCTCTCCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLSSWLL*PSPPGS
Trigger: GCTTCCAGGAGGAGAGGGCCATAGGAGCCAAGATGA...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGCCTCAGGAGTCATCTTaGCTCCTATGGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRPQESS*LLWPSP
Trigger: AGGAGAGGGCCATAGGAGCCAAGATGACTCCTGAGG...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCGGGTCCCACCGGCTaGAGTGACCTCCTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPGPTG*SDLLAA
Trigger: CGCGGCGAGGAGGTCACTCCAGCCGGTGGGACCCGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGTCGAAGGGGGCGGCTaGGCCCGGAGCGGCAAGACG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCVEGGG*ARSGKT
Trigger: CGTCTTGCCGCTCCGGGCCCAGCCGCCCCCTTCGAC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR TCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCTCAGGGCCTTGGGGTTaGGTCTCAGGGTCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSSGPWG*VSGSAR
Trigger: TCGAGCTGACCCTGAGACTCAACCCCAAGGCCCTGA...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCTCAGGGCCTTGGGGTTaGGTCTCAGGGTCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PGHRESQAFRSPQESSWLSGPWG*VSGSAR
Trigger: TCGAGCTGACCCTGAGACTCAACCCCAAGGCCCTGA...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp CTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCAGGAACGATCTTGGCTTGGTaGAACCCCGCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LKGETPKGVLHHSKEHPGTILAW*NPASVP
Trigger: AGGCACAGAGGCGGGGTTTCACCAAGCCAAGATCGT...TCCTGGATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CTCCCTGCACTACTTCTGCACCTTGCAGCCTCAGCTCCTTTGCTGCCTTCTTCCGCGAGCAGCTTCCCCTaGTTGACCTCCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPALLLHLAASAPLLPSSASSFP*LTSCSW
Trigger: CCAGGAGCAGGAGGTCAAGCAGGGGAAGCTGCTCGC...GGAAGAAGGCAGCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp CTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LPFAVKVRGGQSPCRQLLGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...AAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR GCA 90 bp TTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCCCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPSKCAAANLPAVSFLMFPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...GAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR GCA 90 bp GCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCAGATGTTGGTGCCTCTaGCCCTCTGGTGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: AGHSRLKSPLCCSSHWSSRCWCL*PSGAPD
Trigger: ATCGGGGGCACCAGAGGGGCAGAGGCACCAACATCT...GCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp ACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTATTCAGATGTTGGTaGCTCTGCCCCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TRGREAGRSQQVEVPFVLLFRCW*LCPSGA
Trigger: GGCACCAGAGGGGCAGAGGCACCAACATCTGAATAA...CAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp GCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCAGCTCCTTGGCATCGTaGACGACCTTGCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: AGHSRLKSPLCCSSHWSSSSLAS*TTLRVC
Trigger: GCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCT...GCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCG +
Preference number: 4 (lower is better)
Translates to: LLPRVSGHHSNLECPIFQASEDP*LQPPIP
Trigger: CGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGC...CTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCASEDP*LQPPIP
Trigger: CGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCG +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGASEDP*LQPPIP
Trigger: CGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGC...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp ACCACAGGACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TTGPRSDTDMPSMGTSPVAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...CACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PGHRESQAFRSPQESSWLAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSTTGPRSDTDMPSMGTSPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...TGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GREAGRSQQVEVPFVLFQVALSV*GFLGQE
Trigger: TTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTAC...CTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCCGGACATGCCATCCATaGGAACGTCACCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RAGHSRLKSPLCCSSHWSRTCHP*ERHLWA
Trigger: TGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG...GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCAGGACGGACATGCCATCCATaGGAACGTCACCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LKGETPKGVLHHSKEHPGRTCHP*ERHLWA
Trigger: TGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG...TCCTGGATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGCTCAGCCCGATGTTCTaGCCGACGTATTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRLSPMF*PTYFSG
Trigger: GCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAG...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCTGCTGTTCCAGCCACTaGTCCAGCGTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AGHSRLKSPLCCSSHWSSCCSSH*SSVRAL
Trigger: CAAGGCCCTGACGCTGGACCAGTGGCTGGAACAGCA...GCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGCTCCGGCCCCACCTaGCAGAGCGCCGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSSGPT*QSAAHG
Trigger: TCCGTGAGCGGCGCTCTGCCAGGTGGGGCCGGAGCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR TCA 90 bp ACCTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAA +
Preference number: 4 (lower is better)
Translates to: TSPLPSKCAAANLPAVSFVSCPP*GREWDE
Trigger: TTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAAC...GAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR TCA 90 bp GGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GRSQQVEVPFVLFQPLVQLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...CTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp GATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGCTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: DVTVGSQGIETEHVGQVPLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...CGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp CGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCGCATCTTCAAAAGGCTaGGCACCACAGGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RAGHSRLKSPLCCSSHWSASSKG*APQDPG
Trigger: ACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGC...GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp TCAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCATGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCT +
Preference number: 4 (lower is better)
Translates to: SARCHGRVSGHRNGTCWPCGCAW*AGQRTP
Trigger: AGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCA...TGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRRTPG*SRQSRR
Trigger: ACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGCGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGT +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLRRTPG*SRQSRR
Trigger: ACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCG...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTCCCTGCACTACTTCTaGACCTTGCAGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMSLHYF*TLQPQL
Trigger: GAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGA...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACCCTGCTTGACCTCCTaGTCCTGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEPCLTS*SWLQLS
Trigger: GGAGAGCTGCAGCCAGGAGCAGGAGGTCAAGCAGGG...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp ACCTGTGGGCAAGCTCAGCAAGTAGCTCTTTCCGTCTGGGGCTTTCTGGGGCAACCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: TCGQAQQVALSVWGFLGQPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...TTGCCCCAGAAAGCCCCAGACGGAAAGAGCTACTTGCTGAGCTTGCCCACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LCCLLPRVSGHHSNLECPPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...GGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp CAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGCCGTGTGCCTGCAAGTaGTCAGCCCGATGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QLDVTVGSQGIETEHVGQPCACK*SARCSG
Trigger: GCCAGAACATCGGGCTGAGCACTTGCAGGCACACGG...CTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGGCGGGGATGGAGCTaGGCGCTAGGCGCCAACTCC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRRGWS*ALGANS
Trigger: GGAGTTGGCGCCTAGCGCGCAGCTCCATCCCCGCCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLGGPGA*PDQRAA
Trigger: AGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCC...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CAGGTCCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTCCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QVPGTGKAKLFVVLRSHLPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...AAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCAGAAACGGAACATGTTaGCCAGGTCCCGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: LDVTVGSQGIETEHVGQVRNGTC*PGPGHR
Trigger: CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCT...GACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CAGGTCCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTTGCTGTTCCAGCCACTaGTCCAGCGTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QVPGTGKAKLFVVLRSHLCCSSH*SSVRAL
Trigger: CAAGGCCCTGACGCTGGACCAGTGGCTGGAACAGCA...AAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCTCCTCGCCGCGGCCTaGGCGGGACAAGTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCLLAAA*AGQVPG
Trigger: TCCTGGAACTTGTCCCGCCCAGGCCGCGGCGAGGAG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCAGTTGGCTCCTCCTaGATCCCGCGGGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCAVGSS*IPRDSA
Trigger: CGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCAGTTGGCTCCTCCTaGATCCCGCGGGACTCGGCG +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLAVGSS*IPRDSA
Trigger: CGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGC...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCGGCCAGTTAGCTCCTTaGCATCGTGCACGACCTTGC +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSGQLAP*HRARPC
Trigger: GCAAGGTCGTGCACGATGCCAAGGAGCTAACTGGCC...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp TTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCGGCACGCAGATCTCTTaGGCTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LPSKCAAANLPAVSFLMFGTQIS*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAAGAGATCTGCGTGCC...GAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCGGGTGATGACCCGCTaGGCAGAGCCTGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRVMTR*AEPEPA
Trigger: TGCAGGCTCAGGCTCTGCTCAGCGGGTCATCACCCG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR TCA 90 bp CTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCAGGACCAGTTAGACCAAAATaGGCGAGGTGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LKGETPKGVLHHSKEHPGPVRPK*ARWRAS
Trigger: AGAGGCTCTCCACCTCGCTCATTTTGGTCTAACTGG...TCCTGGATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp GTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCTCCAGTCCCTGCACTACTTCTaGACCTTGCAGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VKVRGGQSPCRQLLDVLQSLHYF*TLQPQL
Trigger: GAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGA...CTGGAGAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp CTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCGCGAGCAGCTTCCCCTaGTTGACCTCCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LCCLLPRVSGHHSNLECPASSFP*LTSCSW
Trigger: CCAGGAGCAGGAGGTCAAGCAGGGGAAGCTGCTCGC...GGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp GGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: GRSQQVEVPFVLFQPLVQGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...CTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp TCAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCACCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: SARCHGRVSGHRNGTCWPPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...TGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp GCTGCAGCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGCCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: AAALPVIGHDEGGVSPIQPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...CTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp CTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGCCTCCACCTCCCCTTTaGCGTCAAAGTGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLPRVSGHHSNLECPIFQPPPPL*RQSARR
Trigger: CCGCCGCGCACTTTGACGGCAAAGGGGAGGTGGAGG...CTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp GCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCGGTCAGACACGGACATaGCATCCATGGGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: AGHSRLKSPLCCSSHWSSGQTRT*HPWERH
Trigger: GTGACGTTCCCATGGATGGCATGTCCGTGTCTGACC...GCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp TCAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCACCGTGTGCCTGCAAGTaGTCAGCCCGATGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SARCHGRVSGHRNGTCWPPCACK*SARCSG
Trigger: GCCAGAACATCGGGCTGAGCACTTGCAGGCACACGG...TGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp CGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCTTGAAGTCCCCTTTGTaGTGTTCCAGCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: RAGHSRLKSPLCCSSHWSLKSPL*CSSHWS
Trigger: GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAA...GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTGCGGCCGAGTCCACTaGAGAGGCGGGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCCGRVH*RGGDGA
Trigger: AGCTCCATCCCCGCCTCTGCAGTGGACTCGGCCGCA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCGGGACCCCGATTCTaGGGCCGAGTCCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPGPRF*GRVHCR
Trigger: TCTGCAGTGGACTCGGCCGCAGAATCGGGGTCCCGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR GCA 90 bp CGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTAAACCCCGAAGGGAGTaGTCCACCACAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: RTCHPWERHLWASSASSSKPRRE*STTARS
Trigger: GCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTT...AGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCGTCGTTTCCGGGTTTaGCCGCCCCAGGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRRFRV*PPQARA
Trigger: TGCACGTGCCTGGGGCGGGCAAACCCGGAAACGACG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCGTCGTTTCCGGGTTTaGCCGCCCCAGGCACGTGCA +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPRRFRV*PPQARA
Trigger: TGCACGTGCCTGGGGCGGGCAAACCCGGAAACGACG...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp CGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTGAAACCCCGCCTCTGTaGCTCCGAAAACCACCACCA +
Preference number: 4 (lower is better)
Translates to: RTCHPWERHLWASSASSSETPPL*LRKPPP
Trigger: TGGTGGTGGTTTTCGGAGGCACAGAGGCGGGGTTTC...AGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp TCAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAAGCTCCTTGGCATCGTaGACGACCTTGCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SARCHGRVSGHRNGTCWPSSLAS*TTLRVC
Trigger: GCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCT...TGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTCCGGTCCAGAGATCTaGCAGAGCGCCGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWSGPEI*QSAAHG
Trigger: TCCGTGAGCGGCGCTCTGCCAGATCTCTGGACCGGA...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCCACGGAGCCACCCTaGGCACCTGTGCCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCATEPP*APVPPK
Trigger: TTTCGGAGGCACAGGTGCCCAGGGTGGCTCCGTGGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTGCCACGGAGCCACCCTaGGCACCTGTGCCTCCGAAA +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPATEPP*APVPPK
Trigger: TTTCGGAGGCACAGGTGCCCAGGGTGGCTCCGTGGC...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGAGCTCCATGATGACCTaGTCATCTTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMSSMMT*SSWSPC
Trigger: GCAGGGAGACCAAGATGACCAGGTCATCATGGAGCT...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp GCTGCAGCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AAALPVIGHDEGGVSPIQAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...CTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp CGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: RTCHPWERHLWASSASSSRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...AGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp ACCTCCCCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TSPLPSKCAAANLPAVSFFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...GAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp AGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCAGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPTEGRNPEGSAPPQQGAVALSV*GFLGQE
Trigger: TTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTAC...TGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: RAGHSRLKSPLCCSSHWSVALSV*GFLGQE
Trigger: TTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTAC...GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GGCATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCACGGACATGCCATCCATaGGAACGTCACCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GIFKRLSTTGPRSDTDMPRTCHP*ERHLWA
Trigger: TGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG...TGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGGTAATCCAGACACTTTaGGAGGCTGAGGCACGCAGA +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMVIQTL*EAEARR
Trigger: TCTGCGTGCCTCAGCCTCCCAAAGTGTCTGGATTAC...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp AAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCAACCTCCAGAGACCTaGGGAAAGCCACATACTCCG +
Preference number: 4 (lower is better)
Translates to: KVPLKGETPKGVLHHSKEQPPET*GKPHTP
Trigger: CGGAGTATGTGGCTTTCCCCAGGTCTCTGGAGGTTG...CTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGTCATCTTGGCTCCTATaGCCCTCTCCTCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DVTVGSQGIETEHVGQVPSSWLL*PSPPGS
Trigger: GCTTCCAGGAGGAGAGGGCCATAGGAGCCAAGATGA...CGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGCCTCAGGAGTCATCTTaGCTCCTATGGCCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DVTVGSQGIETEHVGQVPPQESS*LLWPSP
Trigger: AGGAGAGGGCCATAGGAGCCAAGATGACTCCTGAGG...CGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCACCTCGTGTCCCTTaGGCCCGATCCCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPPRVP*ARSPPP
Trigger: AGGAGGAGGGGATCGGGCCCAAGGGACACGAGGTGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
3UTR CAA 72 bp GCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACG +
Preference number: 4 (lower is better)
Translates to: AFFLGFRVTTRT*NVPSSRSVRAT
Trigger: CGTGGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAA +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMVSCPP*GREWDE
Trigger: TTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAAC...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR TCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGAGTAATTGGTCACGATaGAGGTGGCGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMSNWSR*RWRKPH
Trigger: ATGGGGCTTACGCCACCTTCATCGTGACCAATTACT...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp GGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTTCTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GHAIHGNVTCGQAQQVALLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...AAGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp GCAAGAAGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCACTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ARSGRGGSQNSRAAAHWSLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...TGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACTTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR TCA 90 bp CGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTGCATCTTCAAAAGGCTaGGCACCACAGGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RTCHPWERHLWASSASSSASSKG*APQDPG
Trigger: ACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGC...AGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCCGCAW*AGQRTP
Trigger: AGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCGCTGAGCAGAGCCTaGGCCTGCAACCTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPLSRA*ACNLQR
Trigger: TCTCTGGAGGTTGCAGGCTCAGGCTCTGCTCAGCGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCATCTTCCAGGAGTGTaGGGGCCACGGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCHLPGV*GPRSHP
Trigger: AGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCATCTTCCAGGAGTGTaGGGGCCACGGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPHLPGV*GPRSHP
Trigger: AGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATG...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp GGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAACGCCCCTCAGCTCCTTTGCTaGCTTCTTCCTAGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: GEEVLKIAGQPHTGHGNAPQLLC*LLPRVS
Trigger: CGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTGAGG...GGCGTTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCCTGCTTGACCTCCTaGTCCTGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPCLTS*SWLQLS
Trigger: GGAGAGCTGCAGCCAGGAGCAGGAGGTCAAGCAGGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCCCCTGCTTGACCTCCTaGTCCTGGCTGCAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EAIWENNGFIQMLVPLPLPCLTS*SWLQLS
Trigger: GGAGAGCTGCAGCCAGGAGCAGGAGGTCAAGCAGGG...GAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCGAGCAGCTTCCCCTaGTTGACCTCCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCASSFP*LTSCSW
Trigger: CCAGGAGCAGGAGGTCAAGCAGGGGAAGCTGCTCGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCGAGCAGCTTCCCCTaGTTGACCTCCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLASSFP*LTSCSW
Trigger: CCAGGAGCAGGAGGTCAAGCAGGGGAAGCTGCTCGC...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp GAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCAGGAAACCTTCTCGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: ETPKGVLHHSKEHPGNLLGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...GAGAAGGTTTCCTGGATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CTCCCTGCACTACTTCTGCACCTTGCAGCCTCAGCTCCTTTGCTGCCTTCTTCCGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: LPALLLHLAASAPLLPSSGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...GGAAGAAGGCAGCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp GCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: ALPVIGHDEGGVSPIQGQGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...CTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp GAGTGCTCCACCACAGCAAGGAGCATCCAGGAAACCTTCTCAACGACGATTCTCCCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: ECSTTARSIQETFSTTILPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...GAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTCCTTGCTGTGGTGGAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGGTCAGACACGGACATaGCATCCATGGGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: QLDVTVGSQGIETEHVGQGQTRT*HPWERH
Trigger: GTGACGTTCCCATGGATGGCATGTCCGTGTCTGACC...CTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCTCGGCCGTGTGCCTaGAAGTGCTCAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPRPCA*KCSARC
Trigger: ACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGCCTCGGCCGTGTGCCTaGAAGTGCTCAGCCCGATGT +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLPRPCA*KCSARC
Trigger: ACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGG...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTACTCCTCGGCCGTGTaGCTGCAAGTGCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCYSSAV*LQVLSP
Trigger: CGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGCTTGAAGTCCCCTTTGTaGTGTTCCAGCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: AGHSRLKSPLCCSSHWSSLKSPL*CSSHWS
Trigger: GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAA...GCTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCTTATTCAGATGTTGGTaGCTCTGCCCCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSLFRCW*LCPSGA
Trigger: GGCACCAGAGGGGCAGAGGCACCAACATCTGAATAA...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR GCA 90 bp GCAAGAAGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCAAAACCCCGAAGGGAGTaGTCCACCACAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ARSGRGGSQNSRAAAHWSKPRRE*STTARS
Trigger: GCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTT...TGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACTTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp CATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCATCGAAACCCCGCCTCTGTaGCTCCGAAAACCACCACCA +
Preference number: 4 (lower is better)
Translates to: HLQKAEHHRTQVRHGHAIETPPL*LRKPPP
Trigger: TGGTGGTGGTTTTCGGAGGCACAGAGGCGGGGTTTC...GATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp AGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATTCCGGTCCAGAGATCTaGCAGAGCGCCGCTCACGGA +
Preference number: 4 (lower is better)
Translates to: SSFAAFFLGFRVTTRTLNSGPEI*QSAAHG
Trigger: TCCGTGAGCGGCGCTCTGCCAGATCTCTGGACCGGA...ATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp TCAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SARCHGRVSGHRNGTCWPRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...TGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTTTCCGTCTGGGGCTTTTGGGAACGTCACCTGTaGGCAAGCTCAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GNVTCGQAQQVALSVWGFWERHL*ASSASS
Trigger: GCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCA...AAAGCCCCAGACGGAAAGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCTGGGAACGTCACCTGTaGGCAAGCTCAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LDVTVGSQGIETEHVGQVWERHL*ASSASS
Trigger: GCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCA...GACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCTCAGCCCGATGTTCTaGCCGACGTATTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGHRESQAFRSPQESSWLLSPMF*PTYFSG
Trigger: GCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAG...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGAGAAACGGAACATGTTaGCCAGGTCCCGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWRNGTC*PGPGHR
Trigger: CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCT...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp GGCATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCACAGGCTGAAGTGCAGTaGCACGATCTTGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GIFKRLSTTGPRSDTDMPQAEVQ*HDLGLV
Trigger: CACCAAGCCAAGATCGTGCCACTGCACTTCAGCCTG...TGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp GTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGCTCCATGATCTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VIGHDEGGVSPIQGQLHDLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...ATCATGGAGCTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp CATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACACGGACATGCCATCGCATCTTCAAAAGGCTaGGCACCACAGGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: HLQKAEHHRTQVRHGHAIASSKG*APQDPG
Trigger: ACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGC...GATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCT +
Preference number: 4 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSCGCAW*AGQRTP
Trigger: AGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCA...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTCAGGGCCTTGGGGTTaGGTCTCAGGGTCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSGPWG*VSGSAR
Trigger: TCGAGCTGACCCTGAGACTCAACCCCAAGGCCCTGA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTTCAGGGCCTTGGGGTTaGGTCTCAGGGTCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGSGPWG*VSGSAR
Trigger: TCGAGCTGACCCTGAGACTCAACCCCAAGGCCCTGA...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR TCA 90 bp CTCCCTGCACTACTTCTGCACCTTGCAGCCTCAGCTCCTTTGCTGCCTTCTTCCGCCTGGGCAACATGGTaGAACCATATCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPALLLHLAASAPLLPSSAWATW*NHISVP
Trigger: AGGCACAGAGATATGGTTTCACCATGTTGCCCAGGC...GGAAGAAGGCAGCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCACCCTGGGCACCTGTaGCTCCGAAAACCACCACCA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCHPGHL*LRKPPP
Trigger: TGGTGGTGGTTTTCGGAGGCACAGGTGCCCAGGGTG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCTTTGCCGTCAAAGTaGGCGGCGGCCAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPLPSK*AAANLP
Trigger: AGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAGGTCAGACACGGACATaGCATCCATGGGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEGQTRT*HPWERH
Trigger: GTGACGTTCCCATGGATGGCATGTCCGTGTCTGACC...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCGTGTGCCTGCAAGTaGTCAGCCCGATGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPCACK*SARCSG
Trigger: GCCAGAACATCGGGCTGAGCACTTGCAGGCACACGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTTACTCCTCGGCCGTGTaGCTGCAAGTGCTCAGCCCG +
Preference number: 4 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSYSSAV*LQVLSP
Trigger: CGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTA...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGATGTTGGTGCCTCTaGCCCTCTGGTGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRCWCL*PSGAPD
Trigger: ATCGGGGGCACCAGAGGGGCAGAGGCACCAACATCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTTCCCGCCCCAGGCACGTaGACAGTGAGTTTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: GHAIHGNVTCGQAQQVALPAPGT*TVSLCK
Trigger: TTTACACAAACTCACTGTGCACGTGCCTGGGGCGGG...AAGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp GCAAGAAGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCACCCGCCCCAGGCACGTaGACAGTGAGTTTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: ARSGRGGSQNSRAAAHWSPAPGT*TVSLCK
Trigger: TTTACACAAACTCACTGTGCACGTGCCTGGGGCGGG...TGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCGCACACTGGTCATaGGAACGCCAATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGAAHWS*ERQCPG
Trigger: TCCGGGACATTGGCGTTCCCATGACCAGTGTGCGGC...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCATCCAGGATTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LKGETPKGVLHHSKEHPGFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...TCCTGGATGCTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGCCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp AGTGCTCCACCACAGCAAGGAGCATCCAGGAAACCTTCTCAACGACGATTCTCACCGTCTGGGGCTTTCTaGGGCAAGAAGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SAPPQQGASRKPSQRRFSPSGAF*GKKWER
Trigger: CCTCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGG...TGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTCCTTGCTGTGGTGGAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTTTGGGAACGTCACCTGTaGGCAAGCTCAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GHAIHGNVTCGQAQQVALWERHL*ASSASS
Trigger: GCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCA...AAGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGAAACGGAACATGTTaGCCAGGTCCCGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRNGTC*PGPGHR
Trigger: CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTGCTGTTCCAGCCACTaGTCCAGCGTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCCCSSH*SSVRAL
Trigger: CAAGGCCCTGACGCTGGACCAGTGGCTGGAACAGCA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp GAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGCTGTTCCAGCCACTaGTCCAGCGTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: EAIWENNGFIQMLVPLPLCCSSH*SSVRAL
Trigger: CAAGGCCCTGACGCTGGACCAGTGGCTGGAACAGCA...GAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CCCATTCAGGGCCAGCTCCATGATGACCTGGTCATCTTGGTCTCCCTGCACTACGTAATCCAGACACTTTaGGAGGCTGAGGCACGCAGA +
Preference number: 4 (lower is better)
Translates to: PIQGQLHDDLVILVSLHYVIQTL*EAEARR
Trigger: TCTGCGTGCCTCAGCCTCCCAAAGTGTCTGGATTAC...GTAGTGCAGGGAGACCAAGATGACCAGGTCATCATGGAGCTGGCCCTGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp AGCTCAGCAAGTAGCTCTTTCCGTCTGGGGCTTTCTGGGGCAAGAAGTGGGAGACAGGCTGAAGTGCAGTaGCACGATCTTGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: SSASSSFRLGLSGARSGRQAEVQ*HDLGLV
Trigger: CACCAAGCCAAGATCGTGCCACTGCACTTCAGCCTG...TCTCCCACTTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTACTTGCTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp CAGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAAGCCACGGAGCCACCCTaGGCACCCTTAAGATTTTGC +
Preference number: 4 (lower is better)
Translates to: QLLCCLLPRVSGHHSNLEATEPP*APLRFC
Trigger: GCAAAATCTTAAGGGTGCCCAGGGTGGCTCCGTGGC...TTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp GCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGAGTAATTGGTCACGATaGAGGTGGCGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: ALPVIGHDEGGVSPIQGQSNWSR*RWRKPH
Trigger: ATGGGGCTTACGCCACCTTCATCGTGACCAATTACT...CTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAGCCTGGGCAACATGGTaGAACCATATCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEAWATW*NHISVP
Trigger: AGGCACAGAGATATGGTTTCACCATGTTGCCCAGGC...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp GTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGCTCCATGATGGCACGCAGATCTCTTaGGCTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VIGHDEGGVSPIQGQLHDGTQIS*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAAGAGATCTGCGTGCC...ATCATGGAGCTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp AAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTGCTCCACCACAGCAAGGAGCAGGCACGTGCACAGTaGGTTTGTGTAAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: KVPLKGETPKGVLHHSKEQARAQ*VCVNPV
Trigger: AACTGGATTTACACAAACTCACTGTGCACGTGCCTG...CTCCTTGCTGTGGTGGAGCACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp ACCACAGGACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTGCAGGCACGTGCACAGTaGGTTTGTGTAAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: TTGPRSDTDMPSMGTSPVQARAQ*VCVNPV
Trigger: AACTGGATTTACACAAACTCACTGTGCACGTGCCTG...CACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR GCA 90 bp TTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCTCATCTTGGTCTCCCTaGACTACTTCTGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: FRVTTRTLNVPSSRSVRASSWSP*TTSAPC
Trigger: GCAAGGTGCAGAAGTAGTGCAGGGAGACCAAGATGA...GGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTCCGTGTGCCTGCAAGTaGTCAGCCCGATGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSPCACK*SARCSG
Trigger: GCCAGAACATCGGGCTGAGCACTTGCAGGCACACGG...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGTCATCTTGGCATCGTaGACGACCTTGCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCVILAS*TTLRVC
Trigger: GCACACCCGCAAGGTCGTGCACGATGCCAAGATGAC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp GCAAGAAGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCAAGCTCCATGATGACCTaGTCATCTTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ARSGRGGSQNSRAAAHWSSSMMT*SSWSPC
Trigger: GCAGGGAGACCAAGATGACCAGGTCATCATGGAGCT...TGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp AGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: SSFAAFFLGFRVTTRTLNRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...ATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp GGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCCACTGGTCCAGTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GRSQQVEVPFVLFQPLVQFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...CTGGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CCA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEVALSV*GFLGQE
Trigger: TTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTAC...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCGGACATGCCATCCATaGGAACGTCACCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRTCHP*ERHLWA
Trigger: TGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCGGACATGCCATCCATaGGAACGTCACCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPRTCHP*ERHLWA
Trigger: TGCCCACAGGTGACGTTCCCATGGATGGCATGTCCG...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR TCA 90 bp CACCACAGCAAGGAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTCTGCCGTCAGCTTCTTaGTGTTCTCCAGGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: HHSKEHPGNLLNDDSHSGLPSAS*CSPGRC
Trigger: ACAGCGGCCTGGAGAACATCAAGAAGCTGACGGCAG...ACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTCCTTGCTGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCATCTTCAAAAGGCTaGGCACCACAGGACCCAGGT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCASSKG*APQDPG
Trigger: ACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTCCCTGCACTACTTCTaGACCTTGCAGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSLHYF*TLQPQL
Trigger: GAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTTCCCTGCACTACTTCTaGACCTTGCAGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPSLHYF*TLQPQL
Trigger: GAGCTGAGGCTGCAAGGTGCAGAAGTAGTGCAGGGA...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGGTCAGACACGGACATaGCATCCATGGGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCGQTRT*HPWERH
Trigger: GTGACGTTCCCATGGATGGCATGTCCGTGTCTGACC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTGGTCAGACACGGACATaGCATCCATGGGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPGQTRT*HPWERH
Trigger: GTGACGTTCCCATGGATGGCATGTCCGTGTCTGACC...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGTCATCTTGGCATCGTaGACGACCTTGCGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSVILAS*TTLRVC
Trigger: GCACACCCGCAAGGTCGTGCACGATGCCAAGATGAC...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp GCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGGAAACCATATCTCTGTaGCTCCGAAAACCACCACCA +
Preference number: 4 (lower is better)
Translates to: ALPVIGHDEGGVSPIQGQETISL*LRKPPP
Trigger: TGGTGGTGGTTTTCGGAGGCACAGAGATATGGTTTC...CTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCCGCCCCAGGCACGTaGACAGTGAGTTTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPAPGT*TVSLCK
Trigger: TTTACACAAACTCACTGTGCACGTGCCTGGGGCGGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCCCCGCCCCAGGCACGTaGACAGTGAGTTTGTGTAAA +
Preference number: 4 (lower is better)
Translates to: EAIWENNGFIQMLVPLPLPAPGT*TVSLCK
Trigger: TTTACACAAACTCACTGTGCACGTGCCTGGGGCGGG...GAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTGGGAACGTCACCTGTaGGCAAGCTCAGCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCWERHL*ASSASS
Trigger: GCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCTCAGGAGTCATCTTaGCATCGTGCACGACCTTGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPQESS*HRARPC
Trigger: GCAAGGTCGTGCACGATGCCAAGATGACTCCTGAGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCAACCTCCAGAGACCTaGGGAAAGCCACATACTCCG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCQPPET*GKPHTP
Trigger: CGGAGTATGTGGCTTTCCCCAGGTCTCTGGAGGTTG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR CCA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCAGAAATTTCACTCTGTaGCCAGTTAGCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSRNFTL*PVSSLA
Trigger: TGCCAAGGAGCTAACTGGCCACAGAGTGAAATTTCT...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp CAGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAA +
Preference number: 4 (lower is better)
Translates to: QLLCCLLPRVSGHHSNLEVSCPP*GREWDE
Trigger: TTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAAC...TTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCAGTTAGACCAAAATaGGCGAGGTGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPVRPK*ARWRAS
Trigger: AGAGGCTCTCCACCTCGCTCATTTTGGTCTAACTGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp CATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCAGTTAGACCAAAATaGGCGAGGTGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: HLGEQWLYSDVGASAPLVPVRPK*ARWRAS
Trigger: AGAGGCTCTCCACCTCGCTCATTTTGGTCTAACTGG...CACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCTCAGCTCCTTTGCTaGCTTCTTCCTAGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPQLLC*LLPRVS
Trigger: CGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTGAGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp CTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGCCTCAGCTCCTTTGCTaGCTTCTTCCTAGGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LLPRVSGHHSNLECPIFQPQLLC*LLPRVS
Trigger: CGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTGAGG...CTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR GCA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCGGCCAATCTCCCTaGCGTCAGCTTCTTGATGTT +
Preference number: 4 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSGGQSP*RQLLDV
Trigger: AACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCC...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTTGAAGTCCCCTTTGTaGTGTTCCAGCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCLKSPL*CSSHWS
Trigger: GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGTTGAAGTCCCCTTTGTaGTGTTCCAGCCACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLLKSPL*CSSHWS
Trigger: GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAA...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTTATTCAGATGTTGGTaGCTCTGCCCCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCLFRCW*LCPSGA
Trigger: GGCACCAGAGGGGCAGAGGCACCAACATCTGAATAA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp GAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTTATTCAGATGTTGGTaGCTCTGCCCCTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: EAIWENNGFIQMLVPLPLLFRCW*LCPSGA
Trigger: GGCACCAGAGGGGCAGAGGCACCAACATCTGAATAA...GAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGCTCCATGATGACCTaGTCATCTTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSSMMT*SSWSPC
Trigger: GCAGGGAGACCAAGATGACCAGGTCATCATGGAGCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTAGCTCCATGATGACCTaGTCATCTTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGSSMMT*SSWSPC
Trigger: GCAGGGAGACCAAGATGACCAGGTCATCATGGAGCT...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCVALSV*GFLGQE
Trigger: TTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTAC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGTAGCTCTTTCCGTCTaGGGCTTTCTGGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGVALSV*GFLGQE
Trigger: TTCTTGCCCCAGAAAGCCCCAGACGGAAAGAGCTAC...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCTCAGCCCGATGTTCTaGCCGACGTATTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCLSPMF*PTYFSG
Trigger: GCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTCAGCCCGATGTTCTaGCCGACGTATTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPLSPMF*PTYFSG
Trigger: GCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAG...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CACCACAGCAAGGAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTCAACCTCCAGAGACCTaGGGAAAGCCACATACTCCG +
Preference number: 4 (lower is better)
Translates to: HHSKEHPGNLLNDDSHSGQPPET*GKPHTP
Trigger: CGGAGTATGTGGCTTTCCCCAGGTCTCTGGAGGTTG...ACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTCCTTGCTGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCVSCPP*GREWDE
Trigger: TTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAAC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAA +
Preference number: 4 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPVSCPP*GREWDE
Trigger: TTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAAC...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGTAATTGGTCACGATaGAGGTGGCGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSNWSR*RWRKPH
Trigger: ATGGGGCTTACGCCACCTTCATCGTGACCAATTACT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTAGTAATTGGTCACGATaGAGGTGGCGTAAGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGSNWSR*RWRKPH
Trigger: ATGGGGCTTACGCCACCTTCATCGTGACCAATTACT...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTCATCTTGGTCTCCCTaGACTACTTCTGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSSWSP*TTSAPC
Trigger: GCAAGGTGCAGAAGTAGTGCAGGGAGACCAAGATGA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR GCA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTTCATCTTGGTCTCCCTaGACTACTTCTGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGSSWSP*TTSAPC
Trigger: GCAAGGTGCAGAAGTAGTGCAGGGAGACCAAGATGA...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp GTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGCTCCATGATGAAACCATATCTCTGTaGCTCCGAAAACCACCACCA +
Preference number: 4 (lower is better)
Translates to: VIGHDEGGVSPIQGQLHDETISL*LRKPPP
Trigger: TGGTGGTGGTTTTCGGAGGCACAGAGATATGGTTTC...ATCATGGAGCTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp GTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGCTCCATGATATGACCTGGTCATCTTaGTCTCCCTGCACTACTTCT +
Preference number: 4 (lower is better)
Translates to: VIGHDEGGVSPIQGQLHDMTWSS*SPCTTS
Trigger: AGAAGTAGTGCAGGGAGACCAAGATGACCAGGTCAT...ATCATGGAGCTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGATGACCTGGTCATCTTaGTCTCCCTGCACTACTTCT +
Preference number: 4 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWMTWSS*SPCTTS
Trigger: AGAAGTAGTGCAGGGAGACCAAGATGACCAGGTCAT...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp CAGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAAATGACCTGGTCATCTTaGTCTCCCTGCACTACTTCT +
Preference number: 4 (lower is better)
Translates to: QLLCCLLPRVSGHHSNLEMTWSS*SPCTTS
Trigger: AGAAGTAGTGCAGGGAGACCAAGATGACCAGGTCAT...TTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CCA 90 bp TCAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAAGAAATTTCACTCTGTaGCCAGTTAGCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SARCHGRVSGHRNGTCWPRNFTL*PVSSLA
Trigger: TGCCAAGGAGCTAACTGGCCACAGAGTGAAATTTCT...TGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR TCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCAGGCACGTGCACAGTaGGTTTGTGTAAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCQARAQ*VCVNPV
Trigger: AACTGGATTTACACAAACTCACTGTGCACGTGCCTG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR TCA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGCAGGCACGTGCACAGTaGGTTTGTGTAAATCCAGTT +
Preference number: 4 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLQARAQ*VCVNPV
Trigger: AACTGGATTTACACAAACTCACTGTGCACGTGCCTG...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR GCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCACCCCCATTGTCTATaGATCGAGTATGTGTCGAAG +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCHPHCL*IEYVSK
Trigger: CTTCGACACATACTCGATGCATAGACAATGGGGGTG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCATGACCTGGTCATCTTaGTCTCCCTGCACTACTTCT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCMTWSS*SPCTTS
Trigger: AGAAGTAGTGCAGGGAGACCAAGATGACCAGGTCAT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CCA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR TCA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCACGATCTTGGCTTGGTaGAACCCCGCCTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFTILAW*NPASVP
Trigger: AGGCACAGAGGCGGGGTTTCACCAAGCCAAGATCGT...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCAGGGCAGCCGCACACTaGTCATGGGAACGCCAATGT +
Preference number: 4 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFRAAAH*SWERQC
Trigger: ACATTGGCGTTCCCATGACCAGTGTGCGGCTGCCCT...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCATCTGGGAGAACAATaGCTTTATTCAGATGTTGGT +
Preference number: 4 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCHLGEQ*LYSDVG
Trigger: ACCAACATCTGAATAAAGCCATTGTTCTCCCAGATG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CCA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTTAATTTTCAGGTATTaGGCGTCAGGCAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWLIFRY*ASGKDN
Trigger: ATTATCTTTGCCTGACGCCCAATACCTGAAAATTAA...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR TCA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCCCAGTTAGACCAAAATaGGCGAGGTGGAGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFPVRPK*ARWRAS
Trigger: AGAGGCTCTCCACCTCGCTCATTTTGGTCTAACTGG...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CCA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCTTCTGGGGCAAGAAGTaGGAGAGGAGGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFFWGKK*ERRFSK
Trigger: TTTTGAGAACCTCCTCTCCCACTTCTTGCCCCAGAA...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS CCA 90 bp CCCGGCCCGGGTCCCACCGGCTGGAGTGACCTCCTCGCCGCGGCCTaGGCGGGACAAGTTCCAGGAGCCCGGGACCCCGATTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: PGPGPTGWSDLLAAA*AGQVPGARDPDSAA
Trigger: GGCCGCAGAATCGGGGTCCCGGGCTCCTGGAACTTGTCCCGCCCAGGCCGCGGCGAGGAGGTCACTCCAGCCGGTGGGACCCGGGCCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS GCA 90 bp GGCAGAGCGCCGCTCACGGAAGCCCAGCGTCGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGTGTCGGCCGAAACCCCTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GRAPLTEAQRRRTPG*SRQSRRVGRNPSSG
Trigger: GCCGGAGGAGGGGTTTCGGCCGACACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGCTGGGCTTCCGTGAGCGGCGCTCTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
ENST00000633905.1
CDS CCA 90 bp CGACGTGTCGGCCGAAACCCCTCCTCCGGCGCAGTTGGCTCCTCCTaGATCCCGCGGGACTCGGCGTCGTTTCCGGGTTTGCCCGCCCCA +
Preference number: 5 (lower is better)
Translates to: RRVGRNPSSGAVGSS*IPRDSASFPGLPAP
Trigger: TGGGGCGGGCAAACCCGGAAACGACGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGGGGTTTCGGCCGACACGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000571291.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
CDS CCA 90 bp ACCTGGCAGAGCGCCGCTCACGGAAGCCCAGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCGACGTGTCGGCCGAAACCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TWQSAAHGSPASEDP*LQPPIPTCRPKPLL
Trigger: GAGGAGGGGTTTCGGCCGACACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGCTGGGCTTCCGTGAGCGGCGCTCTGCCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000574425.5
ENST00000574733.5
ENST00000632013.1
ENST00000633085.1
CDS CCA 90 bp GAATCCGGTCCAGAGATCGGCTGGAGTGACCTCCTCGCCGCGGCCTaGGCGGGACAAGTTCCAGGAGCCCGGGACCCCGATTCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: ESGPEIGWSDLLAAA*AGQVPGARDPDSAA
Trigger: GGCCGCAGAATCGGGGTCCCGGGCTCCTGGAACTTGTCCCGCCCAGGCCGCGGCGAGGAGGTCACTCCAGCCGATCTCTGGACCGGATTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404295.7
ENST00000573571.1
ENST00000575557.5
ENST00000616587.2
ENST00000633784.1
ENST00000634144.1
CDS CCA 90 bp ATCTGGCAGAGCGCCGCTCACGGAAGCCCAGCGTCGGAGGACCCCTaGCTGCAGCCGCCAATCCCGACGTGTCGGCCGAAACCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: IWQSAAHGSPASEDP*LQPPIPTCRPKPLL
Trigger: GAGGAGGGGTTTCGGCCGACACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGCTGGGCTTCCGTGAGCGGCGCTCTGCCAGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000621810.4
ENST00000632279.1
ENST00000633905.1
CDS CCA 90 bp CCGCCAATCCCGACGTGTCGGCCGAAACCCCTCCTCCGGCGCAGTTaGCTCCTCCTGGATCCCGCGGGACTCGGCGTCGTTTCCGGGTTT +
Preference number: 5 (lower is better)
Translates to: PPIPTCRPKPLLRRS*LLLDPAGLGVVSGF
Trigger: AAACCCGGAAACGACGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGGGGTTTCGGCCGACACGTCGGGATTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571291.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
CDS GCA 90 bp TGGGGCGGGAGGCCCACCTTGGCATCGTGCACGACCTTGCGGGTGTaGTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: WGGRPTLASCTTLRV*LVSRAAYSSAVCLQ
Trigger: TTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGGCCTCCCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000632312.1
CDS-3UTR CAA 90 bp CCGATCCCCACAAGGGGCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PIPTRGREAGRSQQVEVPASCTT*RVCLVS
Trigger: GCTCACCAAGCACACCCGCAAGGTCGTGCACGATGC...GGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGCCCCTTGTGGGGATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS TCA 90 bp GTGGGCAGCCCTGGACACACCCTCCCTACGGGAGCTAGAAAGCCCTaGCAAGGATGCCTGAGTCACCTGGGGCGGGAGGCCCACCTTGGC +
Preference number: 5 (lower is better)
Translates to: VGSPGHTLPTGARKP*QGCLSHLGREAHLG
Trigger: GCCAAGGTGGGCCTCCCGCCCCAGGTGACTCAGGCATCCTTGTCAGGGCTTTCTAGCTCCCGTAGGGAGGGTGTGTCCAGGGCTGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000576176.1
ENST00000631694.1
CDS TCA 90 bp GGAGGCCCACCTTGGCATCGTGCACGACCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GGPPWHRARPCGCAW*AGQRTPRPCACKCS
Trigger: TGAGCACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000632312.1
CDS-3UTR CAA 90 bp GCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: AARRAGHSRLKSPLCCSSASCTT*RVCLVS
Trigger: GCTCACCAAGCACACCCGCAAGGTCGTGCACGATGC...GCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGTCCAGCGTCAGGGCCTaGGGGTTGAGTCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRSSVRA*GLSLRV
Trigger: GACCCTGAGACTCAACCCCAAGGCCCTGACGCTGGA...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS GCA 90 bp CTGTGGCCAGTTAGCTCCTTGGCATCGTGCACGACCTTGCGGGTGTaGTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LWPVSSLASCTTLRV*LVSRAAYSSAVCLQ
Trigger: TTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCTAACTGGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS TCA 90 bp CAGGAGTCATCTTGGCATCGTGCACGACCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: QESSWHRARPCGCAW*AGQRTPRPCACKCS
Trigger: TGAGCACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGATGACTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000632825.1
ENST00000633085.1
CDS TCA 90 bp CAGTTAGCTCCTTGGCATCGTGCACGACCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTGCTCA +
Preference number: 5 (lower is better)
Translates to: QLAPWHRARPCGCAW*AGQRTPRPCACKCS
Trigger: TGAGCACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCTAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS TCA 90 bp ATCCATGGGAACGTCACCTGTGGGCAAGCCTGTGGGGCAGAGACGTaGGCTGGTATATGTCCCGAGGGCAGACAGGGGCAGGGACAGAGC +
Preference number: 5 (lower is better)
Translates to: IHGNVTCGQACGAET*AGICPEGRQGQGQS
Trigger: GCTCTGTCCCTGCCCCTGTCTGCCCTCGGGACATATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTGACGTTCCCATGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CCA 90 bp TTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCCTaGGCACCCTTAAGATTTTGCGCGTTGCAGCTGGGCCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LNVPSSRSVRATEPP*APLRFCALQLGPGA
Trigger: AGCCCCTGGGCCCAGCTGCAACGCGCAAAATCTTAAGGGTGCCCAGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGGGACATTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000573520.5
ENST00000575557.5
ENST00000633905.1
ENST00000634144.1
CDS-3UTR CAA 90 bp AGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCATGGGAAGCGTCGTTTCCGGGTTaGCCCGCCCCAGGCACGTGC +
Preference number: 5 (lower is better)
Translates to: SGRGGSQNSRAAAHWSWEASFPG*PAPGTC
Trigger: GCACGTGCCTGGGGCGGGCAAACCCGGAAACGACGC...TTCCCATGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CAA 90 bp GGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGTGGCCAGTTAGCTCCTaGGCATCGTGCACGACCTTG +
Preference number: 5 (lower is better)
Translates to: GRVSGHRNGTCWPGPGHRWPVSS*ASCTTL
Trigger: CAAGGTCGTGCACGATGCCAAGGAGCTAACTGGCCA...CCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS CCA 90 bp ACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCCTGTaGGGCAGAGACGTGAGCTGGTATATGTCCCGAGGGCAGACAGGG +
Preference number: 5 (lower is better)
Translates to: TRTCHPWERHLWASL*GRDVSWYMSRGQTG
Trigger: CCCTGTCTGCCCTCGGGACATATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS-3UTR CAA 90 bp CCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCCACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: PGTGKAKLFVVLRSHLGSTLRVC*VSRAAY
Trigger: GTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGT...GGAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCTCCAGCGTCAGGGCCTaGGGGTTGAGTCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PGHRESQAFRSPQESSWLSSVRA*GLSLRV
Trigger: GACCCTGAGACTCAACCCCAAGGCCCTGACGCTGGA...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp GCCGCGAGGCGGGCAGGTCACAGCAGGTTGAAGTCCCCTTTGTGCTGTTCCAGCAGGTTGAAGTCCCCTTaGTGCTGTTCCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: AARRAGHSRLKSPLCCSSRLKSP*CCSSHW
Trigger: CCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCT...GCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGCCCGCCTCGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS GCA 90 bp TTGCGGGTGTGCTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTaGCTGCAAGTGCTCAGCCCGATGTTCTGGCCGACGTATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LRVCLVSRAAYSSAV*LQVLSPMFWPTYFS
Trigger: AGAAAAATACGTCGGCCAGAACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571448.5
ENST00000572110.1
ENST00000572232.5
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000576176.1
ENST00000616587.2
ENST00000621810.4
ENST00000631694.1
ENST00000631867.1
ENST00000631933.1
ENST00000632013.1
ENST00000632312.1
ENST00000632825.1
ENST00000633085.1
CDS CCA 90 bp GACCCAGGTCAGACACGGACATGCCATCCATGGGAACGTCACCTGTaGGCAAGCCTGTGGGGCAGAGACGTGAGCTGGTATATGTCCCGA +
Preference number: 5 (lower is better)
Translates to: DPGQTRTCHPWERHL*ASLWGRDVSWYMSR
Trigger: TCGGGACATATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS-3UTR CAA 90 bp CAGGTCCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: QVPGTGKAKLFVVLRSHLTLRVC*VSRAAY
Trigger: GTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGT...AAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCGTCGTTTCCGGGTTaGCCCGCCCCAGGCACGTGC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCASFPG*PAPGTC
Trigger: GCACGTGCCTGGGGCGGGCAAACCCGGAAACGACGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTGCGTCGTTTCCGGGTTaGCCCGCCCCAGGCACGTGC +
Preference number: 5 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPASFPG*PAPGTC
Trigger: GCACGTGCCTGGGGCGGGCAAACCCGGAAACGACGC...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCTCCTCCGGCGCAGTaGGCTCCTCCTGGATCCCGC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPPPAQ*APPGSR
Trigger: GCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTCCTCCTCCGGCGCAGTaGGCTCCTCCTGGATCCCGC +
Preference number: 5 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGPPPAQ*APPGSR
Trigger: GCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGG...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCCCACCTCGTGTCCCTaGGGCCCGATCCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCPTSCP*GPIPSS
Trigger: GGAGGAGGGGATCGGGCCCAAGGGACACGAGGTGGG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS TCA 90 bp GGGCACCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCTCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: GHLCLRKPPPVSCPP*GREWDESGPEISSP
Trigger: CGGCGAGGAGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574425.5
ENST00000633085.1
CDS-3UTR CAA 90 bp GGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGTCCCGGGCACCGGGAAAAGGTTGAAGTCCCCTTaGTGCTGTTCCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: GSQGIETEHVGQVPGTGKRLKSP*CCSSHW
Trigger: CCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCT...TTTCCCGGTGCCCGGGACCTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp CACCACAGCAAGGAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTCCTCCTCCGGCGCAGTaGGCTCCTCCTGGATCCCGC +
Preference number: 5 (lower is better)
Translates to: HHSKEHPGNLLNDDSHSGPPPAQ*APPGSR
Trigger: GCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGG...ACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTCCTTGCTGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS TCA 90 bp GGGCACCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GHLCLRKPPPVSCPP*GREWDESGPEIWQS
Trigger: GCTCTGCCAGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283429.11
ENST00000575002.5
ENST00000621810.4
ENST00000633322.1
CDS TCA 90 bp GGGCACCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: GHLCLRKPPPVSCPP*GREWDESGPEIGWS
Trigger: ACTCCAGCCGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404295.7
ENST00000616587.2
CDS TCA 90 bp CCGCCTCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PPLCLRKPPPVSCPP*GREWDESGPEIWQS
Trigger: GCTCTGCCAGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CAA 90 bp CAGCGAGCAGCTTCCCCTGAAAGTCCCACTGAAGGGCGAAACCCCGAAGGGAGTACCACCACCAGTTTCTaGTCCACCATGAGGACGAGA +
Preference number: 5 (lower is better)
Translates to: QRAASPESPTEGRNPEGSTTTSF*STMRTR
Trigger: TCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGT...ACTCCCTTCGGGGTTTCGCCCTTCAGTGGGACTTTCAGGGGAAGCTGCTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CAA 90 bp CCTTTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGACCACCACCAGTTTCTaGTCCACCATGAGGACGAGA +
Preference number: 5 (lower is better)
Translates to: PLPSKCAAANLPAVSFLMTTTSF*STMRTR
Trigger: TCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGT...CATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000632279.1
ENST00000633905.1
CDS-3UTR CAA 90 bp TTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCCACTACTTCTGCACCTaGCAGCCTCAGCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: LPSKCAAANLPAVSFLMFHYFCT*QPQLLC
Trigger: GCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTG...GAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCGCAGGTCACAGCAGGTaGAAGTCCCCTTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PGHRESQAFRSPQESSWLAGHSR*KSPLCC
Trigger: ACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp CCCGGGCACCGGGAAAGCCAAGCTTTTCGTAGTCCTCAGGAGTCATCTTGGCTCGGCTTTATTCAGATGTaGGTGCCTCTGCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PGHRESQAFRSPQESSWLGFIQM*VPLPLW
Trigger: CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCC...GAGCCAAGATGACTCCTGAGGACTACGAAAAGCTTGGCTTTCCCGGTGCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS CCA 90 bp GCGTACTCCTCGGCCGTGTGCCTGCAAGTGCTCAGCCCGATGTTCTaGCCGACGTATTTTTCTGGCATCTTCAAAAGGCTGAGCACCACA +
Preference number: 5 (lower is better)
Translates to: AYSSAVCLQVLSPMF*PTYFSGIFKRLSTT
Trigger: TGTGGTGCTCAGCCTTTTGAAGATGCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571448.5
ENST00000572110.1
ENST00000572232.5
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000576176.1
ENST00000616587.2
ENST00000621810.4
ENST00000631694.1
ENST00000631867.1
ENST00000631933.1
ENST00000632013.1
ENST00000632312.1
ENST00000632825.1
ENST00000633085.1
CDS-3UTR CAA 90 bp TTGCCGTCAAAGTGCGCGGCGGCCAATCTCCCTGCCGTCAGCTTCTTGATGTTCGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPSKCAAANLPAVSFLMFVTTRT*NVPSSR
Trigger: CCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGAC...GAACATCAAGAAGCTGACGGCAGGGAGATTGGCCGCCGCGCACTTTGACGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCTLRVC*VSRAAY
Trigger: GTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPTLRVC*VSRAAY
Trigger: GTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGT...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCASCTT*RVCLVS
Trigger: GCTCACCAAGCACACCCGCAAGGTCGTGCACGATGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp CCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PSGRTMALFRCWCLCPSGASCTT*RVCLVS
Trigger: GCTCACCAAGCACACCCGCAAGGTCGTGCACGATGC...ACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTCCAGCGTCAGGGCCTaGGGGTTGAGTCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSSVRA*GLSLRV
Trigger: GACCCTGAGACTCAACCCCAAGGCCCTGACGCTGGA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp CAGCTCGATGTCACGGTCGGGTCTCAGGGCATAGAAACGGAACATGTTGGCCAGGCAGGTCACAGCAGGTaGAAGTCCCCTTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QLDVTVGSQGIETEHVGQAGHSR*KSPLCC
Trigger: ACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC...CTGGCCAACATGTTCCGTTTCTATGCCCTGAGACCCGACCGTGACATCGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS-3UTR CAA 90 bp GGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTAGCTCTTTGGCACGATCTTGGCTaGGTGAAACCCCGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GHAIHGNVTCGQAQQVALWHDLG*VKPRLC
Trigger: ACAGAGGCGGGGTTTCACCAAGCCAAGATCGTGCCA...AAGAGCTACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS CCA 90 bp GTGCCTGCAAGTGCTCAGCCCGATGTTCTGGCCGACGTATTTTTCTaGCATCTTCAAAAGGCTGAGCACCACAGGACCCAGGTCAGACAC +
Preference number: 5 (lower is better)
Translates to: VPASAQPDVLADVFF*HLQKAEHHRTQVRH
Trigger: GTGTCTGACCTGGGTCCTGTGGTGCTCAGCCTTTTGAAGATGCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAGCACTTGCAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571448.5
ENST00000572110.1
ENST00000572232.5
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000576176.1
ENST00000616587.2
ENST00000621810.4
ENST00000631694.1
ENST00000631867.1
ENST00000631933.1
ENST00000632013.1
ENST00000632312.1
ENST00000632825.1
ENST00000633085.1
CDS-3UTR CAA 90 bp CAGACACGGACATGCCATCCATGGGAACGTCACCTGTGGGCAAGCTCAGCAAGTACCACCACCAGTTTCTaGTCCACCATGAGGACGAGA +
Preference number: 5 (lower is better)
Translates to: QTRTCHPWERHLWASSASTTTSF*STMRTR
Trigger: TCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGT...ACTTGCTGAGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CAA 90 bp TTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGGAGTGTGCGGGCCACCACCACCAGTTTCTaGTCCACCATGAGGACGAGA +
Preference number: 5 (lower is better)
Translates to: FRVTTRTLNVPSSRSVRATTTSF*STMRTR
Trigger: TCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGT...GGCCCGCACACTCCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp GCAAGAAGTGGGAGAGGAGGTTCTCAAAATAGCAGGGCAGCCGCACACTGGTCACACTACTTCTGCACCTaGCAGCCTCAGCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: ARSGRGGSQNSRAAAHWSHYFCT*QPQLLC
Trigger: GCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTG...TGACCAGTGTGCGGCTGCCCTGCTATTTTGAGAACCTCCTCTCCCACTTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp GCTCTCCCAGTAATTGGTCACGATGAAGGTGGCGTAAGCCCCATTCAGGGCCAGGATGACCTGGTCATCTaGGTCTCCCTGCACTACTTC +
Preference number: 5 (lower is better)
Translates to: ALPVIGHDEGGVSPIQGQDDLVI*VSLHYF
Trigger: GAAGTAGTGCAGGGAGACCAAGATGACCAGGTCATC...CTGGCCCTGAATGGGGCTTACGCCACCTTCATCGTGACCAATTACTGGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTTCCAGCGTCAGGGCCTaGGGGTTGAGTCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSSSVRA*GLSLRV
Trigger: GACCCTGAGACTCAACCCCAAGGCCCTGACGCTGGA...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS TCA 90 bp ATATCTCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCTCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: ISLCLRKPPPVSCPP*GREWDESGPEISSP
Trigger: CGGCGAGGAGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000575995.1
ENST00000632220.1
CDS GCA 90 bp AGCCCCTCTCCAAAGGGTCCAAGCTGGTTCTTCCCAGCAGTCAGCTaGACACTCCAGCACTCGGGCATAGCTAAGACAAGTCTTGCTATT +
Preference number: 5 (lower is better)
Translates to: SPSPKGPSWFFPAVS*TLQHSGIAKTSLAI
Trigger: AATAGCAAGACTTGTCTTAGCTATGCCCGAGTGCTGGAGTGTGCAGCTGACTGCTGGGAAGAACCAGCTTGGACCCTTTGGAGAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS-3UTR CAA 90 bp AGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATTTAAGATTTTGCGCGTaGCAGCTGGGCCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: SSFAAFFLGFRVTTRTLNLRFCA*QLGPGA
Trigger: AGCCCCTGGGCCCAGCTGCAACGCGCAAAATCTTAA...ATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp CTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCATCTTCCAGTTAAGATTTTGCGCGTaGCAGCTGGGCCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LLPRVSGHHSNLECPIFQLRFCA*QLGPGA
Trigger: AGCCCCTGGGCCCAGCTGCAACGCGCAAAATCTTAA...CTGGAAGATGGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS TCA 90 bp ATATCTCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCTGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ISLCLRKPPPVSCPP*GREWDESGPEIWQS
Trigger: GCTCTGCCAGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS TCA 90 bp ATATCTCTGTGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATCGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: ISLCLRKPPPVSCPP*GREWDESGPEIGWS
Trigger: ACTCCAGCCGATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000573571.1
ENST00000575557.5
ENST00000576935.5
ENST00000632129.1
ENST00000633784.1
ENST00000634144.1
CDS-3UTR CAA 90 bp CTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAATGTCCCGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LCCLLPRVSGHHSNLECPVTTRT*NVPSSR
Trigger: CCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGAC...GGGACATTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCACTACTTCTGCACCTaGCAGCCTCAGCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCHYFCT*QPQLLC
Trigger: GCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGCACTACTTCTGCACCTaGCAGCCTCAGCTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLHYFCT*QPQLLC
Trigger: GCAAAGGAGCTGAGGCTGCAAGGTGCAGAAGTAGTG...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp GCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGGATGACCTGGTCATCTaGGTCTCCCTGCACTACTTC +
Preference number: 5 (lower is better)
Translates to: AIWENNGFIQMLVPLPLWDDLVI*VSLHYF
Trigger: GAAGTAGTGCAGGGAGACCAAGATGACCAGGTCATC...CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp CAGCTCCTTTGCTGCCTTCTTCCTAGGGTTTCGGGTCACCACTCGAACCTTGAAGATGACCTGGTCATCTaGGTCTCCCTGCACTACTTC +
Preference number: 5 (lower is better)
Translates to: QLLCCLLPRVSGHHSNLEDDLVI*VSLHYF
Trigger: GAAGTAGTGCAGGGAGACCAAGATGACCAGGTCATC...TTCAAGGTTCGAGTGGTGACCCGAAACCCTAGGAAGAAGGCAGCAAAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573520.5
ENST00000633905.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCTCCTCAGGAGTCATCTaGGCATCGTGCACGACCTTG +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCSSGVI*ASCTTL
Trigger: CAAGGTCGTGCACGATGCCAAGATGACTCCTGAGGA...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp GGAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTTCCTCAGGAGTCATCTaGGCATCGTGCACGACCTTG +
Preference number: 5 (lower is better)
Translates to: GSHLGEQWLYSDVGASAPSSGVI*ASCTTL
Trigger: CAAGGTCGTGCACGATGCCAAGATGACTCCTGAGGA...AGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCAGGTTGAAGTCCCCTTaGTGCTGTTCCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCRLKSP*CCSSHW
Trigger: CCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp GAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCAGGTTGAAGTCCCCTTaGTGCTGTTCCAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: EAIWENNGFIQMLVPLPLRLKSP*CCSSHW
Trigger: CCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCT...GAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGCAGGTCACAGCAGGTaGAAGTCCCCTTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCAGHSR*KSPLCC
Trigger: ACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp AGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCAGGTCACAGCAGGTaGAAGTCCCCTTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: SHLGEQWLYSDVGASAPLAGHSR*KSPLCC
Trigger: ACAGCACAAAGGGGACTTCAACCTGCTGTGACCTGC...CAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGGCTTTATTCAGATGTaGGTGCCTCTGCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCGFIQM*VPLPLW
Trigger: CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS TCA 90 bp AGACAAGTCTTGCTATTTGTGGTAGCACAGAGGCAGCAGTGGAATTaGGTCAGGAAACGGGATGGAATCCGGGTACTGCCACCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: RQVLLFVVAQRQQWN*VRKRDGIRVLPPRA
Trigger: TGCCCTAGGTGGCAGTACCCGGATTCCATCCCGTTTCCTGACTCAATTCCACTGCTGCCTCTGTGCTACCACAAATAGCAAGACTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCACCACCACCAGTTTCTaGTCCACCATGAGGACGAGA +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCTTTSF*STMRTR
Trigger: TCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGT...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCVTTRT*NVPSSR
Trigger: CCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGAC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp GAAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCGTCACCACTCGAACCTaGAATGTCCCATCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: EAIWENNGFIQMLVPLPLVTTRT*NVPSSR
Trigger: CCTGGAAGATGGGACATTCAAGGTTCGAGTGGTGAC...GAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCGATGACCTGGTCATCTaGGTCTCCCTGCACTACTTC +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCDDLVI*VSLHYF
Trigger: GAAGTAGTGCAGGGAGACCAAGATGACCAGGTCATC...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
CDS-3UTR CAA 90 bp AAGCCATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGCTTTATTCAGATGTaGGTGCCTCTGCCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: KPSGRTMALFRCWCLCPSGFIQM*VPLPLW
Trigger: CCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCC...AGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS-3UTR CAA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCGCGTCGTTTCCGGGTTaGCCCGCCCCAGGCACGTGC +
Preference number: 5 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFASFPG*PAPGTC
Trigger: GCACGTGCCTGGGGCGGGCAAACCCGGAAACGACGC...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS-3UTR CAA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCCCTCCTCCGGCGCAGTaGGCTCCTCCTGGATCCCGC +
Preference number: 5 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFPPPAQ*APPGSR
Trigger: GCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGG...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS GCA 90 bp CTCAGCTGTCCAAGTGTAGCCATCATCTTCAGTAGTTACTTGATCTaGTGTTGTGTCTGGCAAGACTGCTATGTGCTGCTGCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LSCPSVAIIFSSYLI*CCVWQDCYVLLQRS
Trigger: GCTCCTCTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGATGGCTACACTTGGACAGCTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS-3UTR CAA 90 bp ATCTGGGAGAACAATGGCTTTATTCAGATGTTGGTGCCTCTGCCCCTCTGGTGCCAAAGGACACCCCCATaGTCTATGCATCGAGTATGT +
Preference number: 5 (lower is better)
Translates to: IWENNGFIQMLVPLPLWCQRTPP*SMHRVC
Trigger: ACATACTCGATGCATAGACAATGGGGGTGTCCTTTG...GCACCAGAGGGGCAGAGGCACCAACATCTGAATAAAGCCATTGTTCTCCCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS TCA 90 bp GTGATGACTGGGGAAAGGGACGCCAGAAGAGTGATTGTTGTCTGGTaGACTGTGCTGTCAGTGTGTATGTCAGAAGCCAACAAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: VMTGERDARRVIVVW*TVLSVCMSEANKVD
Trigger: ATCCACTTTGTTGGCTTCTGACATACACACTGACAGCACAGTTCACCAGACAACAATCACTCTTCTGGCGTCCCTTTCCCCAGTCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS GCA 90 bp TGGCAGTCTTACTCTATAGGCCTGTGGAAACGTGTAAAGATACCTTaGAGGCCCAGAGTGAGAAATTGGAGCCACCTTGTTCGATTGACC +
Preference number: 5 (lower is better)
Translates to: WQSYSIGLWKRVKIP*RPRVRNWSHLVRLT
Trigger: GGTCAATCGAACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTATCTTTACACGTTTCCACAGGCCTATAGAGTAAGACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CCA 90 bp AGTGTAGCCATCATCTTCAGTAGTTACTTGATCTGCTGTTGTGTCTaGCAAGACTGCTATGTGCTGCTGCAGAGGAGCCATTGTCACCTT +
Preference number: 5 (lower is better)
Translates to: SVAIIFSSYLICCCV*QDCYVLLQRSHCHL
Trigger: AAGGTGACAATGGCTCCTCTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGATGGCTACACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS-3UTR CAA 90 bp GAGCATCCAGGAAACCTTCTCAACGACGATTCTCATTCAGGTATTTTTATTTTCTGGCACGATCTTGGCTaGGTGAAACCCCGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: EHPGNLLNDDSHSGIFIFWHDLG*VKPRLC
Trigger: ACAGAGGCGGGGTTTCACCAAGCCAAGATCGTGCCA...GAAAATAAAAATACCTGAATGAGAATCGTCGTTGAGAAGGTTTCCTGGATGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS GCA 90 bp ATCATCTTCAGTAGTTACTTGATCTGCTGTTGTGTCTGGCAAGACTaGTATGTGCTGCTGCAGAGGAGCCATTGTCACCTTGAACTATCT +
Preference number: 5 (lower is better)
Translates to: IIFSSYLICCCVWQD*YVLLQRSHCHLELS
Trigger: AGATAGTTCAAGGTGACAATGGCTCCTCTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS GCA 90 bp CTACGGGTGATGACTGGGAGGAGGAGAAAAATTACCTCTTTATCTTaGATGAACATCTTAATTTTCAGGTATTGGGCGTCAGGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: LRVMTGRRRKITSLS*MNILIFRYWASGKD
Trigger: ATCTTTGCCTGACGCCCAATACCTGAAAATTAAGATGTTCATGCAAGATAAAGAGGTAATTTTTCTCCTCCTCCCAGTCATCACCCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621810.4
CDS GCA 72 bp CTGCGGCCGAGTCCACTGCAGAGGCGGGGATGGAGCTaGGCGCTAGGCGCCAACTCCCTCCCCGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: LRPSPLQRRGWS*ALGANSLPAAP
Trigger: CGGAGCTGCGGGGAGGGAGTTGGCGCCTAGCGCGCAGCTCCATCCCCGCCTCTGCAGTGGACTCGGCCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000404295.7
ENST00000574425.5
ENST00000574733.5
ENST00000575557.5
ENST00000575995.1
ENST00000616587.2
ENST00000632013.1
ENST00000632220.1
ENST00000633085.1
ENST00000634144.1
CDS CCA 72 bp GGTCCCACCGGCTGGAGTGACCTCCTCGCCGCGGCCTaGGCGGGACAAGTTCCAGGAGCCCGGGACCCCGAT +
Preference number: 6 (lower is better)
Translates to: GPTGWSDLLAAA*AGQVPGARDPD
Trigger: ATCGGGGTCCCGGGCTCCTGGAACTTGTCCCGCCCAGGCCGCGGCGAGGAGGTCACTCCAGCCGGTGGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS GCA 72 bp CCGCTCACGGAAGCCCAGCGTCGGAGGACCCCTGGCTaGAGCCGCCAATCCCGACGTGTCGGCCGAAACCCC +
Preference number: 6 (lower is better)
Translates to: PLTEAQRRRTPG*SRQSRRVGRNP
Trigger: GGGGTTTCGGCCGACACGTCGGGATTGGCGGCTGCAGCCAGGGGTCCTCCGACGCTGGGCTTCCGTGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000571291.5
ENST00000573520.5
ENST00000574425.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
ENST00000633085.1
ENST00000633905.1
CDS CCA 72 bp CCAGAGATCGGCTGGAGTGACCTCCTCGCCGCGGCCTaGGCGGGACAAGTTCCAGGAGCCCGGGACCCCGAT +
Preference number: 6 (lower is better)
Translates to: PEIGWSDLLAAA*AGQVPGARDPD
Trigger: ATCGGGGTCCCGGGCTCCTGGAACTTGTCCCGCCCAGGCCGCGGCGAGGAGGTCACTCCAGCCGATCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000404295.7
ENST00000573571.1
ENST00000575557.5
ENST00000616587.2
ENST00000633784.1
ENST00000634144.1
CDS GCA 72 bp GGCGGGACAAGTTCCAGGAGCCCGGGACCCCGATTCTaGGGCCGAGTCCACTGCAGAGGCGGGGATGGAGCT +
Preference number: 6 (lower is better)
Translates to: GGTSSRSPGPRF*GRVHCRGGDGA
Trigger: AGCTCCATCCCCGCCTCTGCAGTGGACTCGGCCGCAGAATCGGGGTCCCGGGCTCCTGGAACTTGTCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000404295.7
ENST00000573571.1
ENST00000574425.5
ENST00000574733.5
ENST00000575557.5
ENST00000575995.1
ENST00000616587.2
ENST00000632013.1
ENST00000632220.1
ENST00000633085.1
ENST00000633784.1
ENST00000634144.1
CDS CCA 72 bp GGACGAATCCGGTCCAGAGATCTCCTCGCCGCGGCCTaGGCGGGACAAGTTCCAGGAGCCCGGGACCCCGAT +
Preference number: 6 (lower is better)
Translates to: GRIRSRDLLAAA*AGQVPGARDPD
Trigger: ATCGGGGTCCCGGGCTCCTGGAACTTGTCCCGCCCAGGCCGCGGCGAGGAGATCTCTGGACCGGATTCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000574425.5
ENST00000575995.1
ENST00000632220.1
ENST00000633085.1
CDS CCA 72 bp GGCCGAAACCCCTCCTCCGGCGCAGTTGGCTCCTCCTaGATCCCGCGGGACTCGGCGTCGTTTCCGGGTTTG +
Preference number: 6 (lower is better)
Translates to: GRNPSSGAVGSS*IPRDSASFPGL
Trigger: CAAACCCGGAAACGACGCCGAGTCCCGCGGGATCCAGGAGGAGCCAACTGCGCCGGAGGAGGGGTTTCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571291.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
CDS CAA 90 bp GGCGGGAGGCCCACCTTGGCATCGTGCACGACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: GGRPTLASCTTLRVC*VSRAAYSSAVCLQV
Trigger: CACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGGCCTCCCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000632312.1
CDS CAA 90 bp GGAGTCATCTGGGGCGGGAGGCCCACCTTGGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: GVIWGGRPTLASCTT*RVCLVSRAAYSSAV
Trigger: CACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGGCCTCCCGCCCCAGATGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572232.5
ENST00000632312.1
CDS CAA 72 bp TGGGGCGGGAGGCCCACCTTGGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGCAGGGCAGCGTACTCC +
Preference number: 6 (lower is better)
Translates to: WGGRPTLASCTT*RVCLVSRAAYS
Trigger: GGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGGCCTCCCGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000632312.1
CDS CAA 72 bp GCGGGCCACGGAGCCACCCTGGGCACCCTTAAGATTTaGCGCGTTGCAGCTGGGCCCAGGGGCTCATGCCTG +
Preference number: 6 (lower is better)
Translates to: AGHGATLGTLKI*RVAAGPRGSCL
Trigger: CAGGCATGAGCCCCTGGGCCCAGCTGCAACGCGCAAAATCTTAAGGGTGCCCAGGGTGGCTCCGTGGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000573520.5
ENST00000575557.5
ENST00000633905.1
ENST00000634144.1
CDS TCA 72 bp CCTTGGCATCGTGCACGACCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: PWHRARPCGCAW*AGQRTPRPCAC
Trigger: GCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000571448.5
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000631867.1
ENST00000632312.1
CDS GCA 72 bp AGGCCCACCTTGGCATCGTGCACGACCTTGCGGGTGTaGTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: RPTLASCTTLRV*LVSRAAYSSAV
Trigger: CACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000632312.1
CDS CCA 72 bp GGCCGCTGTAGACCACATAGTGGAGGCCCAGGCGCCTaGCCAGATCAGCGAGCAGCTTCCCCCTTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GRCRPHSGGPGA*PDQRAASPLRR
Trigger: CCTCCTCAAGGGGGAAGCTGCTCGCTGATCTGGCCAGGCGCCTGGGCCTCCACTATGTGGTCTACAGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572391.1
ENST00000632014.1
CDS CAA 72 bp CCCACCTTGGCATCGTGCACGACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGC +
Preference number: 6 (lower is better)
Translates to: PTLASCTTLRVC*VSRAAYSSAVC
Trigger: GCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572232.5
ENST00000576176.1
ENST00000631694.1
ENST00000632312.1
CDS TCA 72 bp TCTTGGCATCGTGCACGACCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SWHRARPCGCAW*AGQRTPRPCAC
Trigger: GCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000632825.1
ENST00000633085.1
CDS GCA 72 bp TGCTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTaGCTGCAAGTGCTCAGCCCGATGTTCTGGCCGACG +
Preference number: 6 (lower is better)
Translates to: CLVSRAAYSSAV*LQVLSPMFWPT
Trigger: CGTCGGCCAGAACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571448.5
ENST00000572110.1
ENST00000572232.5
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000576176.1
ENST00000616587.2
ENST00000621810.4
ENST00000631694.1
ENST00000631867.1
ENST00000631933.1
ENST00000632013.1
ENST00000632312.1
ENST00000632825.1
ENST00000633085.1
CDS CAA 72 bp TCCTGGATCCCGCGGGACTCGGCGTCGTTTCCGGGTTaGCCCGCCCCAGGCACGTGCACAGTGAGTTTGTGT +
Preference number: 6 (lower is better)
Translates to: SWIPRDSASFPG*PAPGTCTVSLC
Trigger: ACACAAACTCACTGTGCACGTGCCTGGGGCGGGCAAACCCGGAAACGACGCCGAGTCCCGCGGGATCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571291.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
CDS CAA 72 bp AGCTCCTTGGCATCGTGCACGACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGC +
Preference number: 6 (lower is better)
Translates to: SSLASCTTLRVC*VSRAAYSSAVC
Trigger: GCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS TCA 72 bp CCGGATGCTACGGGTGATGACCCGCTGAGCAGAGCCTaGGCCTGCAACCTCCAGAGACCTGGGGAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: PDATGDDPLSRA*ACNLQRPGESH
Trigger: GTGGCTTTCCCCAGGTCTCTGGAGGTTGCAGGCTCAGGCTCTGCTCAGCGGGTCATCACCCGTAGCATCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000571291.5
ENST00000574733.5
ENST00000632013.1
ENST00000632279.1
CDS TCA 72 bp CGTAGTCCTCAGGAGTCATCTTGCGGGTGTGCTTGGTaGGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: RSPQESSCGCAW*AGQRTPRPCAC
Trigger: GCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGATGACTCCTGAGGACTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572110.1
ENST00000631933.1
CDS GCA 72 bp GGAGTCATCTTGGCATCGTGCACGACCTTGCGGGTGTaGTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: GVILASCTTLRV*LVSRAAYSSAV
Trigger: CACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGATGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000632825.1
ENST00000633085.1
CDS GCA 72 bp GTTAGCTCCTTGGCATCGTGCACGACCTTGCGGGTGTaGTTGGTGAGCAGGGCAGCGTACTCCTCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: VSSLASCTTLRV*LVSRAAYSSAV
Trigger: CACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS GCA 72 bp CCCGCCAGGAGCGACAAAGGACACCCCCATTGTCTATaGATCGAGTATGTGTCGAAGGGGGCGGCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: PARSDKGHPHCL*IEYVSKGAAGP
Trigger: GGGCCCAGCCGCCCCCTTCGACACATACTCGATGCATAGACAATGGGGGTGTCCTTTGTCGCTCCTGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS CCA 72 bp CCATCTTCCAGGAGTGTGCGGGCCACGGAGCCACCCTaGGCACCCTTAAGATTTTGCGCGTTGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: PSSRSVRATEPP*APLRFCALQLG
Trigger: GCCCAGCTGCAACGCGCAAAATCTTAAGGGTGCCCAGGGTGGCTCCGTGGCCCGCACACTCCTGGAAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000573520.5
ENST00000575557.5
ENST00000633905.1
ENST00000634144.1
CDS CCA 72 bp CACCTGTGGGCAAGCCTGTGGGGCAGAGACGTGAGCTaGTATATGTCCCGAGGGCAGACAGGGGCAGGGACA +
Preference number: 6 (lower is better)
Translates to: HLWASLWGRDVS*YMSRGQTGAGT
Trigger: TGTCCCTGCCCCTGTCTGCCCTCGGGACATATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CAA 72 bp GTCATCTTGGCATCGTGCACGACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGC +
Preference number: 6 (lower is better)
Translates to: VILASCTTLRVC*VSRAAYSSAVC
Trigger: GCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000632825.1
ENST00000633085.1
CDS CAA 90 bp TGGCCAGTTAGCTCCTTGGCATCGTGCACGACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: WPVSSLASCTTLRVC*VSRAAYSSAVCLQV
Trigger: CACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCTAACTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS CAA 90 bp TCCTCAGGAGTCATCTTGGCATCGTGCACGACCTTGCGGGTGTGCTaGGTGAGCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTG +
Preference number: 6 (lower is better)
Translates to: SSGVILASCTTLRVC*VSRAAYSSAVCLQV
Trigger: CACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGATGACTCCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000632825.1
ENST00000633085.1
CDS CAA 90 bp GTTGGCTCCTCCTGGATCCCGCGGGACTCGGCGTCGTTTCCGGGTTaGCCCGCCCCAGGCACGTGCACAGTGAGTTTGTGTAAATCCAGT +
Preference number: 6 (lower is better)
Translates to: VGSSWIPRDSASFPG*PAPGTCTVSLCKSS
Trigger: ACTGGATTTACACAAACTCACTGTGCACGTGCCTGGGGCGGGCAAACCCGGAAACGACGCCGAGTCCCGCGGGATCCAGGAGGAGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000571291.5
ENST00000574733.5
ENST00000621810.4
ENST00000632013.1
ENST00000632279.1
CDS TCA 72 bp AACGTCACCTGTGGGCAAGCCTGTGGGGCAGAGACGTaGGCTGGTATATGTCCCGAGGGCAGACAGGGGCAG +
Preference number: 6 (lower is better)
Translates to: NVTCGQACGAET*AGICPEGRQGQ
Trigger: CTGCCCCTGTCTGCCCTCGGGACATATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTGACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CCA 72 bp CCACAGGACCCAGGTCAGACACGGACATGCCATCCATaGGAACGTCACCTGTGGGCAAGCCTGTGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: PQDPGQTRTCHP*ERHLWASLWGR
Trigger: TCTGCCCCACAGGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTGACCTGGGTCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CAA 72 bp CTGTGGCCAGTTAGCTCCTTGGCATCGTGCACGACCTaGCGGGTGTGCTTGGTGAGCAGGGCAGCGTACTCC +
Preference number: 6 (lower is better)
Translates to: LWPVSSLASCTT*RVCLVSRAAYS
Trigger: GGAGTACGCTGCCCTGCTCACCAAGCACACCCGCAAGGTCGTGCACGATGCCAAGGAGCTAACTGGCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571448.5
ENST00000631867.1
CDS GCA 72 bp GCAGGGCAGCGTACTCCTCGGCCGTGTGCCTGCAAGTaGTCAGCCCGATGTTCTGGCCGACGTATTTTTCTG +
Preference number: 6 (lower is better)
Translates to: AGQRTPRPCACK*SARCSGRRIFL
Trigger: CAGAAAAATACGTCGGCCAGAACATCGGGCTGAGCACTTGCAGGCACACGGCCGAGGAGTACGCTGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571448.5
ENST00000572110.1
ENST00000572232.5
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000576176.1
ENST00000616587.2
ENST00000621810.4
ENST00000631694.1
ENST00000631867.1
ENST00000631933.1
ENST00000632013.1
ENST00000632312.1
ENST00000632825.1
ENST00000633085.1
CDS CCA 72 bp TTGTCTATGCATCGAGTATGTGTCGAAGGGGGCGGCTaGGCCCGGAGCGGCAAGACGCCTGTCCCGAGATAT +
Preference number: 6 (lower is better)
Translates to: LSMHRVCVEGGG*ARSGKTPVPRY
Trigger: ATATCTCGGGACAGGCGTCTTGCCGCTCCGGGCCCAGCCGCCCCCTTCGACACATACTCGATGCATAGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574733.5
ENST00000632013.1
CDS CCA 72 bp TGCCATCCATGGGAACGTCACCTGTGGGCAAGCCTGTaGGGCAGAGACGTGAGCTGGTATATGTCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: CHPWERHLWASL*GRDVSWYMSRG
Trigger: CCCTCGGGACATATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTGACGTTCCCATGGATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CCA 72 bp CAGACACGGACATGCCATCCATGGGAACGTCACCTGTaGGCAAGCCTGTGGGGCAGAGACGTGAGCTGGTAT +
Preference number: 6 (lower is better)
Translates to: QTRTCHPWERHL*ASLWGRDVSWY
Trigger: ATACCAGCTCACGTCTCTGCCCCACAGGCTTGCCCACAGGTGACGTTCCCATGGATGGCATGTCCGTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CAA 72 bp GATCTTGGCTTGGTGAAACCCCGCCTCCTTAAGATTTaGCGCGTTGCAGCTGGGCCCAGGGGCTCATGCCTG +
Preference number: 6 (lower is better)
Translates to: DLGLVKPRLLKI*RVAAGPRGSCL
Trigger: CAGGCATGAGCCCCTGGGCCCAGCTGCAACGCGCAAAATCTTAAGGAGGCGGGGTTTCACCAAGCCAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575995.1
ENST00000632220.1
CDS CAA 90 bp GAGCCACCCTGGGCACCTGTGCCTCCGAAAACCACCACCAGTTTCTaGTCCACCATGAGGACGAGAATGGGACGAATCCGGTCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: EPPWAPVPPKTTTSF*STMRTRMGRIRSRD
Trigger: ATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGGTGCCCAGGGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000574425.5
ENST00000574733.5
ENST00000575002.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000633085.1
ENST00000633322.1
CDS TCA 72 bp GATGGAATCCGGGTACTGCCACCTAGGGCAGGCTGTTaGGGCTCTCTGAGCCTGGGTTGCTGCATTCCTAGA +
Preference number: 6 (lower is better)
Translates to: DGIRVLPPRAGC*GSLSLGCCIPR
Trigger: TCTAGGAATGCAGCAACCCAGGCTCAGAGAGCCTCAACAGCCTGCCCTAGGTGGCAGTACCCGGATTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CAA 72 bp CCCGCCTCTGTGCCTCCGAAAACCACCACCAGTTTCTaGTCCACCATGAGGACGAGAATGGGACGAATCCGG +
Preference number: 6 (lower is better)
Translates to: PASVPPKTTTSF*STMRTRMGRIR
Trigger: CCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS GCA 72 bp GTGGCACGATCTTGGCTTGGTGAAACCCCGCCTCTGTaGCTCCGAAAACCACCACCAGTTTCTTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: VARSWLGETPPL*LRKPPPVSCPP
Trigger: TGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGGCGGGGTTTCACCAAGCCAAGATCGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571291.5
ENST00000632279.1
CDS GCA 72 bp AGAGACGGGAGAAGAGACAACACCTGGAGAAGGCCATaGGAAGAGGGAAGCGGAGATTGGAGCTTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: RDGRRDNTWRRP*EEGSGDWSFVA
Trigger: GGCCACAAAGCTCCAATCTCCGCTTCCCTCTTCGCATGGCCTTCTCCAGGTGTTGTCTCTTCTCCCGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575002.5
ENST00000633322.1
CDS CAA 72 bp TGGGCACCTGTGCCTCCGAAAACCACCACCAGTTTCTaGTCCACCATGAGGACGAGAATGGGACGAATCCGG +
Preference number: 6 (lower is better)
Translates to: WAPVPPKTTTSF*STMRTRMGRIR
Trigger: CCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000574425.5
ENST00000574733.5
ENST00000575002.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000633085.1
ENST00000633322.1
CDS GCA 72 bp CCAAAGGGTCCAAGCTGGTTCTTCCCAGCAGTCAGCTaGACACTCCAGCACTCGGGCATAGCTAAGACAAGT +
Preference number: 6 (lower is better)
Translates to: PKGPSWFFPAVS*TLQHSGIAKTS
Trigger: ACTTGTCTTAGCTATGCCCGAGTGCTGGAGTGTGCAGCTGACTGCTGGGAAGAACCAGCTTGGACCCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS CCA 72 bp TCGGCCGTGTGCCTGCAAGTGCTCAGCCCGATGTTCTaGCCGACGTATTTTTCTGGCATCTTCAAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: SAVCLQVLSPMF*PTYFSGIFKRL
Trigger: CAGCCTTTTGAAGATGCCAGAAAAATACGTCGGCCAGAACATCGGGCTGAGCACTTGCAGGCACACGGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571448.5
ENST00000572110.1
ENST00000572232.5
ENST00000573533.1
ENST00000574425.5
ENST00000574733.5
ENST00000576176.1
ENST00000616587.2
ENST00000621810.4
ENST00000631694.1
ENST00000631867.1
ENST00000631933.1
ENST00000632013.1
ENST00000632312.1
ENST00000632825.1
ENST00000633085.1
CDS TCA 72 bp TGCCTCCGAAAACCACCACCAGTTTCTTGTCCACCATaGGGACGAGAATGGGACGAATCCGGTCCAGAGATC +
Preference number: 6 (lower is better)
Translates to: CLRKPPPVSCPP*GREWDESGPEI
Trigger: GATCTCTGGACCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000283429.11
ENST00000404295.7
ENST00000571291.5
ENST00000573520.5
ENST00000573571.1
ENST00000574425.5
ENST00000574733.5
ENST00000575002.5
ENST00000575557.5
ENST00000575995.1
ENST00000576935.5
ENST00000616587.2
ENST00000621810.4
ENST00000632013.1
ENST00000632129.1
ENST00000632220.1
ENST00000632279.1
ENST00000633085.1
ENST00000633322.1
ENST00000633784.1
ENST00000633905.1
ENST00000634144.1
CDS CAA 72 bp CATATCTCTGTGCCTCCGAAAACCACCACCAGTTTCTaGTCCACCATGAGGACGAGAATGGGACGAATCCGG +
Preference number: 6 (lower is better)
Translates to: HISVPPKTTTSF*STMRTRMGRIR
Trigger: CCGGATTCGTCCCATTCTCGTCCTCATGGTGGACAAGAAACTGGTGGTGGTTTTCGGAGGCACAGAGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000573520.5
ENST00000573571.1
ENST00000575557.5
ENST00000575995.1
ENST00000576935.5
ENST00000632129.1
ENST00000632220.1
ENST00000633784.1
ENST00000633905.1
ENST00000634144.1
CDS CAA 72 bp CTTGCTATTTGTGGTAGCACAGAGGCAGCAGTGGAATaGAGTCAGGAAACGGGATGGAATCCGGGTACTGCC +
Preference number: 6 (lower is better)
Translates to: LAICGSTEAAVE*SQETGWNPGTA
Trigger: GGCAGTACCCGGATTCCATCCCGTTTCCTGACTCAATTCCACTGCTGCCTCTGTGCTACCACAAATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS TCA 72 bp GGGGAAAGGGACGCCAGAAGAGTGATTGTTGTCTGGTaGACTGTGCTGTCAGTGTGTATGTCAGAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: GERDARRVIVVW*TVLSVCMSEAN
Trigger: GTTGGCTTCTGACATACACACTGACAGCACAGTTCACCAGACAACAATCACTCTTCTGGCGTCCCTTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS TCA 72 bp TTGCTATTTGTGGTAGCACAGAGGCAGCAGTGGAATTaGGTCAGGAAACGGGATGGAATCCGGGTACTGCCA +
Preference number: 6 (lower is better)
Translates to: LLFVVAQRQQWN*VRKRDGIRVLP
Trigger: TGGCAGTACCCGGATTCCATCCCGTTTCCTGACTCAATTCCACTGCTGCCTCTGTGCTACCACAAATAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573533.1
ENST00000632825.1
CDS TCA 72 bp CTGCTATGTGCTGCTGCAGAGGAGCCATTGTCACCTTaGACTATCTCTGTGGCAGTCTTACTCTATAGGCCT +
Preference number: 6 (lower is better)
Translates to: LLCAAAEEPLSP*TISVAVLLYRP
Trigger: AGGCCTATAGAGTAAGACTGCCACAGAGATAGTTCAAGGTGACAATGGCTCCTCTGCAGCAGCACATAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS GCA 72 bp TCTGCTGTTGTGTCTGGCAAGACTGCTATGTGCTGCTaGAGAGGAGCCATTGTCACCTTGAACTATCTCTGT +
Preference number: 6 (lower is better)
Translates to: SAVVSGKTAMCC*RGAIVTLNYLC
Trigger: ACAGAGATAGTTCAAGGTGACAATGGCTCCTCTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 90 bp CCTGTGGAAACGTGTAAAGATACCTTGCAGGCCCAGAGTGAGAAATaGGAGCCACCTTGTTCGATTGACCAAAGGCTTGTCCTATGGAGT +
Preference number: 6 (lower is better)
Translates to: PVETCKDTLQAQSEK*EPPCSIDQRLVLWS
Trigger: ACTCCATAGGACAAGCCTTTGGTCAATCGAACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTATCTTTACACGTTTCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 90 bp GTGGCAGTCTTACTCTATAGGCCTGTGGAAACGTGTAAAGATACCTaGCAGGCCCAGAGTGAGAAATTGGAGCCACCTTGTTCGATTGAC +
Preference number: 6 (lower is better)
Translates to: VAVLLYRPVETCKDT*QAQSEKLEPPCSID
Trigger: GTCAATCGAACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTATCTTTACACGTTTCCACAGGCCTATAGAGTAAGACTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS GCA 72 bp AGTAGTTACTTGATCTGCTGTTGTGTCTGGCAAGACTaGTATGTGCTGCTGCAGAGGAGCCATTGTCACCTT +
Preference number: 6 (lower is better)
Translates to: SSYLICCCVWQD*YVLLQRSHCHL
Trigger: AAGGTGACAATGGCTCCTCTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CCA 72 bp GAACTATCTCTGTGGCAGTCTTACTCTATAGGCCTGTaGAAACGTGTAAAGATACCTTGCAGGCCCAGAGTG +
Preference number: 6 (lower is better)
Translates to: ELSLWQSYSIGL*KRVKIPCRPRV
Trigger: CACTCTGGGCCTGCAAGGTATCTTTACACGTTTCCACAGGCCTATAGAGTAAGACTGCCACAGAGATAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 72 bp ACGTGTAAAGATACCTTGCAGGCCCAGAGTGAGAAATaGGAGCCACCTTGTTCGATTGACCAAAGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: TCKDTLQAQSEK*EPPCSIDQRLV
Trigger: GACAAGCCTTTGGTCAATCGAACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTATCTTTACACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 90 bp TCTTCACTCAGCTGTCCAAGTGTAGCCATCATCTTCAGTAGTTACTaGATCTGCTGTTGTGTCTGGCAAGACTGCTATGTGCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSLSCPSVAIIFSSY*ICCCVWQDCYVLLQ
Trigger: CTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGATGGCTACACTTGGACAGCTGAGTGAAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS GCA 72 bp TACTCTATAGGCCTGTGGAAACGTGTAAAGATACCTTaGAGGCCCAGAGTGAGAAATTGGAGCCACCTTGTT +
Preference number: 6 (lower is better)
Translates to: YSIGLWKRVKIP*RPRVRNWSHLV
Trigger: AACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTATCTTTACACGTTTCCACAGGCCTATAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS GCA 72 bp CCAAGTGTAGCCATCATCTTCAGTAGTTACTTGATCTaGTGTTGTGTCTGGCAAGACTGCTATGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: PSVAIIFSSYLI*CCVWQDCYVLL
Trigger: CAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGATGGCTACACTTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CCA 72 bp ATCATCTTCAGTAGTTACTTGATCTGCTGTTGTGTCTaGCAAGACTGCTATGTGCTGCTGCAGAGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: IIFSSYLICCCV*QDCYVLLQRSH
Trigger: ATGGCTCCTCTGCAGCAGCACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 72 bp TTACTCTATAGGCCTGTGGAAACGTGTAAAGATACCTaGCAGGCCCAGAGTGAGAAATTGGAGCCACCTTGT +
Preference number: 6 (lower is better)
Translates to: LLYRPVETCKDT*QAQSEKLEPPC
Trigger: ACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTATCTTTACACGTTTCCACAGGCCTATAGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 72 bp AGCTGTCCAAGTGTAGCCATCATCTTCAGTAGTTACTaGATCTGCTGTTGTGTCTGGCAAGACTGCTATGTG +
Preference number: 6 (lower is better)
Translates to: SCPSVAIIFSSY*ICCCVWQDCYV
Trigger: CACATAGCAGTCTTGCCAGACACAACAGCAGATCAAGTAACTACTGAAGATGATGGCTACACTTGGACAGCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 90 bp ATACCTTGCAGGCCCAGAGTGAGAAATTGGAGCCACCTTGTTCGATaGACCAAAGGCTTGTCCTATGGAGTTACTAATTTTACAGGAAGT +
Preference number: 6 (lower is better)
Translates to: IPCRPRVRNWSHLVR*TKGLSYGVTNFTGS
Trigger: ACTTCCTGTAAAATTAGTAACTCCATAGGACAAGCCTTTGGTCAATCGAACAAGGTGGCTCCAATTTCTCACTCTGGGCCTGCAAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 72 bp AGGCCCAGAGTGAGAAATTGGAGCCACCTTGTTCGATaGACCAAAGGCTTGTCCTATGGAGTTACTAATTTT +
Preference number: 6 (lower is better)
Translates to: RPRVRNWSHLVR*TKGLSYGVTNF
Trigger: AAAATTAGTAACTCCATAGGACAAGCCTTTGGTCAATCGAACAAGGTGGCTCCAATTTCTCACTCTGGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572559.1
ENST00000634127.1
CDS CAA 90 bp GCTACGGGTGATGACTGGGAGGAGGAGAAAAATTACCTCTTTATCTaGCATGAACATCTTAATTTTCAGGTATTGGGCGTCAGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: ATGDDWEEEKNYLFI*HEHLNFQVLGVRQR
Trigger: TCTTTGCCTGACGCCCAATACCTGAAAATTAAGATGTTCATGCAAGATAAAGAGGTAATTTTTCTCCTCCTCCCAGTCATCACCCGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621810.4