Pregenerated sensors for NMI (Homo sapiens)
Ensembl gene IDs: ENSG00000123609Ensembl transcript IDs: ENST00000243346.10, ENST00000414946.1, ENST00000477072.1, ENST00000491771.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACTGGGAGGGGAAGGCCCGGGTTCTCGAAACTGTCGCTGCCTCCTaGAGAAGCGCCGCGGGAGAGCTGCGGGGTCTTCCTGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: HWEGKARVLETVAAS*RSAAGELRGLPEEV Trigger: CACCTCCTCAGGAAGACCCCGCAGCTCTCCCGCGGCGCTTCTGCAGGAGGCAGCGACAGTTTCGAGAACCCGGGCCTTCCCCTCCCAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000414946.1 ENST00000477072.1 ENST00000491771.5 |
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| CDS GCA 90 bp | TTCTCGAAACTGTCGCTGCCTCCTGCAGAAGCGCCGCGGGAGAGCTaGGGGGTCTTCCTGAGGAGGTGGCCCTCGCAGGAACAGCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: FSKLSLPPAEAPRES*GVFLRRWPSQEQLG Trigger: ACCCAGCTGTTCCTGCGAGGGCCACCTCCTCAGGAAGACCCCGCAGCTCTCCCGCGGCGCTTCTGCAGGAGGCAGCGACAGTTTCGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000414946.1 ENST00000477072.1 ENST00000491771.5 |
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| CDS GCA 90 bp | TTTCAAAATCTTGTCAGCCACTCCAATCTCCACAAACGTGATGACTaGACTCCCGGACTGTCTGTCATAGTCCACGCGGTCCACCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: FQNLVSHSNLHKRDD*TPGLSVIVHAVHLS Trigger: GGAGAGGTGGACCGCGTGGACTATGACAGACAGTCCGGGAGTGCAGTCATCACGTTTGTGGAGATTGGAGTGGCTGACAAGATTTTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS CCA 90 bp | TATAAAGAACCTATCCCAAATCATGCTTCTAGGAAGGGACAAGGCTaGCACTCAAAGCCAGATCCTCCCCACTCAGGAACCCCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: YKEPIPNHASRKGQG*HSKPDPPHSGTPSS Trigger: AGAGCTGGGGGTTCCTGAGTGGGGAGGATCTGGCTTTGAGTGCCAGCCTTGTCCCTTCCTAGAAGCATGATTTGGGATAGGTTCTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CCA 90 bp | AACACACTGGCGATGCATGTCTTCTACGCACAGATACTGTCCTGCTaGAATGCCTTTCAACATTTATTTTCAGGCTACAGTGGTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: NTLAMHVFYAQILSC*NAFQHLFSGYSGAP Trigger: TGGTGCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCATTCCAGCAGGACAGTATCTGTGCGTAGAAGACATGCATCGCCAGTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS GCA 90 bp | ACTGGCGATGCATGTCTTCTACGCACAGATACTGTCCTGCTGGAATaGCTTTCAACATTTATTTTCAGGCTACAGTGGTGCACCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: TGDACLLRTDTVLLE*LSTFIFRLQWCTSF Trigger: AAAACTGGTGCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCATTCCAGCAGGACAGTATCTGTGCGTAGAAGACATGCATCGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS GCA 90 bp | GAAAACACACTGGCGATGCATGTCTTCTACGCACAGATACTGTCCTaGTGGAATGCCTTTCAACATTTATTTTCAGGCTACAGTGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: ENTLAMHVFYAQILS*WNAFQHLFSGYSGA Trigger: TGCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCATTCCAGCAGGACAGTATCTGTGCGTAGAAGACATGCATCGCCAGTGTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CCA 90 bp | ACATTTATTTTCAGGCTACAGTGGTGCACCAGTTTTGAGGAAACATaGGTTATAGACTGTCAGAATATGAGCACTGGAAGGGCTGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: TFIFRLQWCTSFEET*VIDCQNMSTGRAGN Trigger: GTTCCCAGCCCTTCCAGTGCTCATATTCTGACAGTCTATAACCCATGTTTCCTCAAAACTGGTGCACCACTGTAGCCTGAAAATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS TCA 90 bp | TCTATTCTTCAAAGTATGCTATGTGAGGTTGACCTAGAGAACACTTaGCCACATCTACTTCTCCACCTCCATTCTTTGCCCGTTGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: SILQSMLCEVDLENT*PHLLLHLHSLPVES Trigger: ACTTTCAACGGGCAAAGAATGGAGGTGGAGAAGTAGATGTGGTCAAGTGTTCTCTAGGTCAACCTCACATAGCATACTTTGAAGAATAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS GCA 90 bp | GTCCTGCTGGAATGCCTTTCAACATTTATTTTCAGGCTACAGTGGTaGACCAGTTTTGAGGAAACATGGGTTATAGACTGTCAGAATATG | + |
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Preference number: 5 (lower is better) Translates to: VLLECLSTFIFRLQW*TSFEETWVIDCQNM Trigger: CATATTCTGACAGTCTATAACCCATGTTTCCTCAAAACTGGTGCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCATTCCAGCAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CCA 90 bp | ACTGTCCTGCTGGAATGCCTTTCAACATTTATTTTCAGGCTACAGTaGTGCACCAGTTTTGAGGAAACATGGGTTATAGACTGTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: TVLLECLSTFIFRLQ*CTSFEETWVIDCQN Trigger: ATTCTGACAGTCTATAACCCATGTTTCCTCAAAACTGGTGCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCATTCCAGCAGGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS TCA 90 bp | ATGCCTTTCAACATTTATTTTCAGGCTACAGTGGTGCACCAGTTTTaGGGAAACATGGGTTATAGACTGTCAGAATATGAGCACTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MPFNIYFQATVVHQF*GNMGYRLSEYEHWK Trigger: CTTCCAGTGCTCATATTCTGACAGTCTATAACCCATGTTTCCTCAAAACTGGTGCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS GCA 90 bp | GTGCTTTTAGAGAATTCCATTTCCAACATTCCCAGGAAATTGCTGTaGAGAAATCCTGCCTCCCAAATCCTCATTTATATCTATCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: VLLENSISNIPRKLL*RNPASQILIYIYLL Trigger: TAAAAGATAGATATAAATGAGGATTTGGGAGGCAGGATTTCTGCACAGCAATTTCCTGGGAATGTTGGAAATGGAATTCTCTAAAAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS GCA 72 bp | CTGGGAGGGGAAGGCCCGGGTTCTCGAAACTGTCGCTaGCTCCTGCAGAAGCGCCGCGGGAGAGCTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LGGEGPGSRNCR*LLQKRRGRAAG Trigger: CCCCGCAGCTCTCCCGCGGCGCTTCTGCAGGAGGCAGCGACAGTTTCGAGAACCCGGGCCTTCCCCTCCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414946.1 ENST00000477072.1 ENST00000491771.5 |
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| CDS CCA 72 bp | GCGCCGCGGGAGAGCTGCGGGGTCTTCCTGAGGAGGTaGCCCTCGCAGGAACAGCTGGGTTCCCCGCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: APRESCGVFLRR*PSQEQLGSPRK Trigger: TTTTCGCGGGGAACCCAGCTGTTCCTGCGAGGGCCACCTCCTCAGGAAGACCCCGCAGCTCTCCCGCGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000414946.1 ENST00000477072.1 ENST00000491771.5 |
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| CDS GCA 72 bp | GGGAAGGCCCGGGTTCTCGAAACTGTCGCTGCCTCCTaGAGAAGCGCCGCGGGAGAGCTGCGGGGTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GKARVLETVAAS*RSAAGELRGLP Trigger: AGGAAGACCCCGCAGCTCTCCCGCGGCGCTTCTGCAGGAGGCAGCGACAGTTTCGAGAACCCGGGCCTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414946.1 ENST00000477072.1 ENST00000491771.5 |
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| CDS TCA 72 bp | GAGGTCAGGAGATCGTATCCATCCTGGTTAACACGGTaGAACCCCGTCTCTACCGCGTCCGCCCGCCGAGCG | + |
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Preference number: 6 (lower is better) Translates to: EVRRSYPSWLTR*NPVSTASARRA Trigger: CGCTCGGCGGGCGGACGCGGTAGAGACGGGGTTTCACCGTGTTAACCAGGATGGATACGATCTCCTGACCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414946.1 |
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| CDS GCA 72 bp | CTTGTCAGCCACTCCAATCTCCACAAACGTGATGACTaGACTCCCGGACTGTCTGTCATAGTCCACGCGGTC | + |
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Preference number: 6 (lower is better) Translates to: LVSHSNLHKRDD*TPGLSVIVHAV Trigger: GACCGCGTGGACTATGACAGACAGTCCGGGAGTGCAGTCATCACGTTTGTGGAGATTGGAGTGGCTGACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS CCA 72 bp | CAAAGGCCTGGGCTGGTGGCCTACCGAGAGAAATATTaGCCCAGTGGAAGTACATGGACTCTCAGGGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: QRPGLVAYREKY*PSGSTWTLRVW Trigger: CCAAACCCTGAGAGTCCATGTACTTCCACTGGGCCAATATTTCTCTCGGTAGGCCACCAGCCCAGGCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CCA 72 bp | CCTATCCCAAATCATGCTTCTAGGAAGGGACAAGGCTaGCACTCAAAGCCAGATCCTCCCCACTCAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: PIPNHASRKGQG*HSKPDPPHSGT Trigger: GGTTCCTGAGTGGGGAGGATCTGGCTTTGAGTGCCAGCCTTGTCCCTTCCTAGAAGCATGATTTGGGATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS TCA 72 bp | TGGACTCCTCTTCTACCTGTAGCAGTAGCTCCAGGGTaGAGGAAAACACACTGGCGATGCATGTCTTCTACG | + |
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Preference number: 6 (lower is better) Translates to: WTPLLPVAVAPG*RKTHWRCMSST Trigger: CGTAGAAGACATGCATCGCCAGTGTGTTTTCCTTCACCCTGGAGCTACTGCTACAGGTAGAAGAGGAGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | TGTCATAGTCCACGCGGTCCACCTCTCCGCCTCCATTTCGGGACTTaGAAAAGCTCAGCTCTAGTTTGTCTCTCATTTGATCTTCACGCA | + |
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Preference number: 6 (lower is better) Translates to: CHSPRGPPLRLHFGT*KSSALVCLSFDLHA Trigger: TGCGTGAAGATCAAATGAGAGACAAACTAGAGCTGAGCTTTTCAAAGTCCCGAAATGGAGGCGGAGAGGTGGACCGCGTGGACTATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS GCA 72 bp | AGAGCCAACTCCTACTTAATTGTGTTTCAAACCTACTaGTGTCCCAGGAGATTGGGAGCTCAGAGCCACGTC | + |
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Preference number: 6 (lower is better) Translates to: RANSYLIVFQTY*CPRRLGAQSHV Trigger: GACGTGGCTCTGAGCTCCCAATCTCCTGGGACAGCAGTAGGTTTGAAACACAATTAAGTAGGAGTTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | AACTCCTACTTAATTGTGTTTCAAACCTACTGCTGTCCCAGGAGATaGGGAGCTCAGAGCCACGTCAAGCGTAGAAGCAATGATGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: NSYLIVFQTYCCPRR*GAQSHVKRRSNDVG Trigger: ACCTACATCATTGCTTCTACGCTTGACGTGGCTCTGAGCTCCCAATCTCCTGGGACAGCAGTAGGTTTGAAACACAATTAAGTAGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | CCGAGAGAAATATTGGCCCAGTGGAAGTACATGGACTCTCAGGGTTaGGCTCTAAGCTCTGCAACTAACCGTATAGACTTTAAGCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PREILAQWKYMDSQG*ALSSATNRIDFKQV Trigger: AACTTGCTTAAAGTCTATACGGTTAGTTGCAGAGCTTAGAGCCAAACCCTGAGAGTCCATGTACTTCCACTGGGCCAATATTTCTCTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS TCA 72 bp | CAAAGTATGCTATGTGAGGTTGACCTAGAGAACACTTaGCCACATCTACTTCTCCACCTCCATTCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QSMLCEVDLENT*PHLLLHLHSLP Trigger: GGGCAAAGAATGGAGGTGGAGAAGTAGATGTGGTCAAGTGTTCTCTAGGTCAACCTCACATAGCATACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS GCA 72 bp | GCATGTCTTCTACGCACAGATACTGTCCTGCTGGAATaGCTTTCAACATTTATTTTCAGGCTACAGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: ACLLRTDTVLLE*LSTFIFRLQWC Trigger: GCACCACTGTAGCCTGAAAATAAATGTTGAAAGGCATTCCAGCAGGACAGTATCTGTGCGTAGAAGACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 72 bp | ATATTGGCCCAGTGGAAGTACATGGACTCTCAGGGTTaGGCTCTAAGCTCTGCAACTAACCGTATAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: ILAQWKYMDSQG*ALSSATNRIDF Trigger: AAAGTCTATACGGTTAGTTGCAGAGCTTAGAGCCAAACCCTGAGAGTCCATGTACTTCCACTGGGCCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | CTATCATTATTTGGAGGTAGCATGTGGAGTAGAAAGAGGCTGGTATaGGACATCATCATAGCACCTGGATTAAGTCCCACAGTCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSLFGGSMWSRKRLV*DIIIAPGLSPTVMA Trigger: AGCCATGACTGTGGGACTTAATCCAGGTGCTATGATGATGTCCAATACCAGCCTCTTTCTACTCCACATGCTACCTCCAAATAATGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | TTCATCTTTTATAAATTCATCTGGCGAATGCTCCTTAAGAATTTGTaGTGTGTCATCTTTATCAGCTTCCATGATCCCCCGCGTCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: FIFYKFIWRMLLKNL*CVIFISFHDPPRPP Trigger: GGGCGGACGCGGGGGATCATGGAAGCTGATAAAGATGACACACAACAAATTCTTAAGGAGCATTCGCCAGATGAATTTATAAAAGATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000243346.10 ENST00000477072.1 ENST00000491771.5 |
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| CDS CAA 72 bp | GAACTTTCGAGCTCACTTGAAACGAACAGGAGATATTaGACAACTGGCTGTCATTCTCAGGAGTTTCAACTG | + |
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Preference number: 6 (lower is better) Translates to: ELSSSLETNRRY*TTGCHSQEFQL Trigger: CAGTTGAAACTCCTGAGAATGACAGCCAGTTGTCAAATATCTCCTGTTCGTTTCAAGTGAGCTCGAAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000243346.10 ENST00000491771.5 |
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| CDS CAA 72 bp | ACCTGGAATCTGACTCCTGAATTTAATGGAACTGGCTaGGCCGTAACCTCCAGATTTACATCTTTTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: TWNLTPEFNGTG*AVTSRFTSFIC Trigger: ACAGATAAAAGATGTAAATCTGGAGGTTACGGCCAAGCCAGTTCCATTAAATTCAGGAGTCAGATTCCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS CAA 90 bp | TTGTTCATCTTTTATAAATTCATCTGGCGAATGCTCCTTAAGAATTaGTTGTGTGTCATCTTTATCAGCTTCCATGATCCCCCGCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LFIFYKFIWRMLLKN*LCVIFISFHDPPRP Trigger: CGGACGCGGGGGATCATGGAAGCTGATAAAGATGACACACAACAAATTCTTAAGGAGCATTCGCCAGATGAATTTATAAAAGATGAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000243346.10 ENST00000477072.1 ENST00000491771.5 |
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| CDS CAA 90 bp | TCTCATAAGGAACTTTCGAGCTCACTTGAAACGAACAGGAGATATTaGACAACTGGCTGTCATTCTCAGGAGTTTCAACTGATAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: SHKELSSSLETNRRY*TTGCHSQEFQLIRI Trigger: AATTCTTATCAGTTGAAACTCCTGAGAATGACAGCCAGTTGTCAAATATCTCCTGTTCGTTTCAAGTGAGCTCGAAAGTTCCTTATGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000243346.10 ENST00000491771.5 |
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| CDS TCA 72 bp | AACATTTATTTTCAGGCTACAGTGGTGCACCAGTTTTaGGGAAACATGGGTTATAGACTGTCAGAATATGAG | + |
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Preference number: 6 (lower is better) Translates to: NIYFQATVVHQF*GNMGYRLSEYE Trigger: CTCATATTCTGACAGTCTATAACCCATGTTTCCTCAAAACTGGTGCACCACTGTAGCCTGAAAATAAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | TTGAGCAACTTCTTCTTTTTCAAAGGTGATAAGTGCTTGTCCTTTTaGTATCTCATAAGGAACTTTCGAGCTCACTTGAAACGAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSNFFFFKGDKCLSF*YLIRNFRAHLKRTG Trigger: TCCTGTTCGTTTCAAGTGAGCTCGAAAGTTCCTTATGAGATACAAAAAGGACAAGCACTTATCACCTTTGAAAAAGAAGAAGTTGCTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS CAA 90 bp | AGTCATACCTTCTTCTTTTTCAAAGGTGATAAGTGCTTGTCCTTTTaGTATCTCATAAGGAACTTTCGAGCTCACTTGAAACGAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SHTFFFFKGDKCLSF*YLIRNFRAHLKRTG Trigger: TCCTGTTCGTTTCAAGTGAGCTCGAAAGTTCCTTATGAGATACAAAAAGGACAAGCACTTATCACCTTTGAAAAAGAAGAAGGTATGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 90 bp | TTGTTCATCTTTTATAAATTCATCTGGCGAATGCTCCTTAAGAATTaGTTGTGTGTCATCTTTATCAGCTTCCATGATCCCCAAGAATCG | + |
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Preference number: 6 (lower is better) Translates to: LFIFYKFIWRMLLKN*LCVIFISFHDPQES Trigger: CGATTCTTGGGGATCATGGAAGCTGATAAAGATGACACACAACAAATTCTTAAGGAGCATTCGCCAGATGAATTTATAAAAGATGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414946.1 |
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| CDS CAA 90 bp | TTCATCTTTTATAAATTCATCTGGCGAATGCTCCTTAAGAATTTGTaGTGTGTCATCTTTATCAGCTTCCATGATCCCCAAGAATCGTTT | + |
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Preference number: 6 (lower is better) Translates to: FIFYKFIWRMLLKNL*CVIFISFHDPQESF Trigger: AAACGATTCTTGGGGATCATGGAAGCTGATAAAGATGACACACAACAAATTCTTAAGGAGCATTCGCCAGATGAATTTATAAAAGATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414946.1 |
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| CDS CAA 72 bp | TTTTATAAATTCATCTGGCGAATGCTCCTTAAGAATTaGTTGTGTGTCATCTTTATCAGCTTCCATGATCCC | + |
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Preference number: 6 (lower is better) Translates to: FYKFIWRMLLKN*LCVIFISFHDP Trigger: GGGATCATGGAAGCTGATAAAGATGACACACAACAAATTCTTAAGGAGCATTCGCCAGATGAATTTATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000243346.10 ENST00000414946.1 ENST00000477072.1 ENST00000491771.5 |
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| CDS CAA 72 bp | TTGAGCAACTTCTTCTTTTTCAAAGGTGATAAGTGCTaGTCCTTTTTGTATCTCATAAGGAACTTTCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSNFFFFKGDKC*SFLYLIRNFRA Trigger: AGCTCGAAAGTTCCTTATGAGATACAAAAAGGACAAGCACTTATCACCTTTGAAAAAGAAGAAGTTGCTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000243346.10 |
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| CDS CAA 72 bp | AGTCATACCTTCTTCTTTTTCAAAGGTGATAAGTGCTaGTCCTTTTTGTATCTCATAAGGAACTTTCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SHTFFFFKGDKC*SFLYLIRNFRA Trigger: AGCTCGAAAGTTCCTTATGAGATACAAAAAGGACAAGCACTTATCACCTTTGAAAAAGAAGAAGGTATGACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000491771.5 |
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| CDS CAA 72 bp | TTCTTCTTTTTCAAAGGTGATAAGTGCTTGTCCTTTTaGTATCTCATAAGGAACTTTCGAGCTCACTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FFFFKGDKCLSF*YLIRNFRAHLK Trigger: TTTCAAGTGAGCTCGAAAGTTCCTTATGAGATACAAAAAGGACAAGCACTTATCACCTTTGAAAAAGAAGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000243346.10 ENST00000491771.5 |
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