RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NME9 (Homo sapiens)

Ensembl gene IDs: ENSG00000181322

Ensembl transcript IDs: ENST00000317876.8, ENST00000333911.9, ENST00000383180.6, ENST00000474690.5, ENST00000475751.5, ENST00000478220.5, ENST00000484930.5, ENST00000488716.1, ENST00000492993.5

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGGCTTACTGCAACCTTCACCTCCCGGGTTCAAGCGATTCTCATaGCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCAC +
Preference number: 1 (lower is better)
Translates to: LGLLQPSPPGFKRFS*LSHPSSWMTGAHHH
Trigger: GTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCCGGGAGGTGAAGGTTGCAGTAAGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
3UTR GCA 90 bp GGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTTGATAGACATCAACAACCACAGCCT +
Preference number: 1 (lower is better)
Translates to: GRPRSSSSGRGSPQV*RGHTSLDRHQQPQP
Trigger: AGGCTGTGGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR CCA 90 bp GTAGCTACCATAAGGAACATGGGCATCTCCAGGGGGTTACAAGGCTaGTCACCAGCAGTGAGGGTGCCGCTGAGGTGGGATAGCTTACAC +
Preference number: 1 (lower is better)
Translates to: VATIRNMGISRGLQG*SPAVRVPLRWDSLH
Trigger: GTGTAAGCTATCCCACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATGCCCATGTTCCTTATGGTAGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR CCA 90 bp AGGGGGTTACAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTaGGATAGCTTACACGGAAAGAACAGTCATGTTTGGTGGTTTTTC +
Preference number: 1 (lower is better)
Translates to: RGLQGWSPAVRVPLR*DSLHGKNSHVWWFF
Trigger: GAAAAACCACCAAACATGACTGTTCTTTCCGTGTAAGCTATCCCACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR TCA 90 bp GACACTCTGAGCCAGAGGTATCCAACTAAGCTATACCTGGACTCCTaGCCCACAGAAACTGGGATAATCAATGTTTGTTGTTGTAAAGCA +
Preference number: 1 (lower is better)
Translates to: DTLSQRYPTKLYLDS*PTETGIINVCCCKA
Trigger: TGCTTTACAACAACAAACATTGATTATCCCAGTTTCTGTGGGTCAGGAGTCCAGGTATAGCTTAGTTGGATACCTCTGGCTCAGAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR-3UTR GCA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGAGACCCCTGGTCACGTaGTCTGGAAGAGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARRPLVT*SGRAAQ
Trigger: CTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCT...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
3UTR-3UTR GCA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGCGGAGGTCTGTTTTGTaGAGTAGACCCCTGGTCACG +
Preference number: 2 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARRRSVL*SRPLVT
Trigger: CGTGACCAGGGGTCTACTGCACAAAACAGACCTCCG...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
3UTR-3UTR TCA 90 bp CATCTCCAGGGGGTTACAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTGTCTAAGTGGAGTGTCTaGGCAGGACATCCATGCCAG +
Preference number: 2 (lower is better)
Translates to: HLQGVTRLVTSSEGAAEVSKWSV*AGHPCQ
Trigger: CTGGCATGGATGTCCTGCTCAGACACTCCACTTAGA...CACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR TCA 90 bp CATCTCCAGGGGGTTACAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTGTTGGCTGAAACATCCTaGGGTTTTCCACTCTCTCAT +
Preference number: 2 (lower is better)
Translates to: HLQGVTRLVTSSEGAAEVLAETS*GFPLSH
Trigger: ATGAGAGAGTGGAAAACCTCAGGATGTTTCAGCCAA...CACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR TCA 90 bp GTCCAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCACTATACCTGGACTCCTaGCCCACAGAAACTGGGATA +
Preference number: 2 (lower is better)
Translates to: VQADLDPHLLEEAHHRFALYLDS*PTETGI
Trigger: TATCCCAGTTTCTGTGGGTCAGGAGTCCAGGTATAG...TGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR CAA 90 bp CTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTaGATAGACATCAACAACCACAGCCTCATGAGTGAGCTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LLEEAHHRFAGATPA*IDINNHSLMSELGS
Trigger: ACTTCCAAGCTCACTCATGAGGCTGTGGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR-3UTR CCA 90 bp ATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTCCACACAAAAGAACTTaGAAGCAAATCTGCTCCTCG +
Preference number: 2 (lower is better)
Translates to: ILIFWKRLTTGLQGPHQPPHKRT*KQICSS
Trigger: CGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG...AGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTATCTAAGTGGAGTGTCTaGGCAGGACATCCATGCCAG +
Preference number: 2 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVSKWSV*AGHPCQ
Trigger: CTGGCATGGATGTCCTGCTCAGACACTCCACTTAGA...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
3UTR-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTAGTACTGGACTCACCCTaGGGGGCTTCTGTATCTTTG +
Preference number: 2 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVVLDSP*GASVSL
Trigger: CAAAGATACAGAAGCCCCTCAGGGTGAGTCCAGTAC...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492993.5
3UTR CAA 90 bp AGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTaGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: SIGTQKSKFRFRRSV*CSRPLVTCSGRAAQ
Trigger: CTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
3UTR-3UTR CCA 90 bp ACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCTGACCCACAGAAACTaGGATAATCAATGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: TSILIFWKRLTTGLQGPHLTHRN*DNQCLL
Trigger: CAACAAACATTGATTATCCCAGTTTCTGTGGGTCAG...GTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR CAA 90 bp TGCCAACAGCCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTaGAGCCTTGAGATCCCGTCTGATACCTTAACTACCGTGGTGAGA +
Preference number: 2 (lower is better)
Translates to: CQQPHKRTWKQICSS*SLEIPSDTLTTVVR
Trigger: TCTCACCACGGTAGTTAAGGTATCAGACGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGCTGTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR-3UTR TCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTTGGCTGAAACATCCTaGGGTTTTCCACTCTCTCAT +
Preference number: 2 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKLAETS*GFPLSH
Trigger: ATGAGAGAGTGGAAAACCTCAGGATGTTTCAGCCAA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR TCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGTTGGCTGAAACATCCTaGGGTTTTCCACTCTCTCAT +
Preference number: 2 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARLAETS*GFPLSH
Trigger: ATGAGAGAGTGGAAAACCTCAGGATGTTTCAGCCAA...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
3UTR-3UTR CCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCTCAGCAGTTGGTATCTaGAGGAGGAGTAATGAATGG +
Preference number: 2 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDISAVGI*RRSNEW
Trigger: CCATTCATTACTCCTCCTCCAGATACCAACTGCTGA...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR CCA 90 bp TTAGGTCTGCCAACAGCCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTCAACTAAGCTATACCTaGACTCCTGACCCACAGAAA +
Preference number: 2 (lower is better)
Translates to: LGLPTATQKNLEANLLLVQLSYT*TPDPQK
Trigger: TTTCTGTGGGTCAGGAGTCCAGGTATAGCTTAGTTG...AACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGCTGTTGGCAGACCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR-3UTR TCA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATAATGAGGACAGAGAGTaGTTGTGCATATCAGTAAGA +
Preference number: 2 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYNEDRE*LCISVR
Trigger: TCTTACTGATATGCACAATCACTCTCTGTCCTCATT...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
3UTR-3UTR TCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCAATGAGGACAGAGAGTaGTTGTGCATATCAGTAAGA +
Preference number: 2 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDINEDRE*LCISVR
Trigger: TCTTACTGATATGCACAATCACTCTCTGTCCTCATT...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
3UTR-3UTR TCA 90 bp CCAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTACTTGATGACTTACCCTaGGGGGCTTCTGTATCTTTG +
Preference number: 2 (lower is better)
Translates to: PKIINPPHTQAHSYKFLVLDDLP*GASVSL
Trigger: CAAAGATACAGAAGCCCCTCAGGGTAAGTCATCAAG...TACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000474690.5
3UTR-3UTR CCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTAGTGATCTTCAACCTTaGCTGTGTACTGGACTCACC +
Preference number: 2 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVSDLQP*LCTGLT
Trigger: GGTGAGTCCAGTACACAGCCAAGGTTGAAGATCACT...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492993.5
3UTR CAA 90 bp TTACAAATTCCTTGTATCTATGATTTAATAAAGACCAAGTCTGCCTaGATGACTTACCCTGAGGGGCTTCTGTATCTTTGTCTGAAAATT +
Preference number: 2 (lower is better)
Translates to: LQIPCIYDLIKTKSA*MTYPEGLLYLCLKI
Trigger: AATTTTCAGACAAAGATACAGAAGCCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTTTATTAAATCATAGATACAAGGAATTTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474690.5
3UTR CCA 72 bp ATAAGGAACATGGGCATCTCCAGGGGGTTACAAGGCTaGTCACCAGCAGTGAGGGTGCCGCTGAGGTGGGAT +
Preference number: 3 (lower is better)
Translates to: IRNMGISRGLQG*SPAVRVPLRWD
Trigger: ATCCCACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATGCCCATGTTCCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR CAA 90 bp GTCCAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTaGATAGACATCAACAACCAC +
Preference number: 3 (lower is better)
Translates to: VQADLDPHLLEEAHHRFAGATPA*IDINNH
Trigger: GTGGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCC...TGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR GCA 72 bp CTGCAACCTTCACCTCCCGGGTTCAAGCGATTCTCATaGCTAAGCCACCCGAGTAGCTGGATGACAGGTGCA +
Preference number: 3 (lower is better)
Translates to: LQPSPPGFKRFS*LSHPSSWMTGA
Trigger: TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCCGGGAGGTGAAGGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
3UTR-3UTR CAA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCATTCCGGAGGTCTGTTTaGTGCAGTAGACCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAFRRSV*CSRPLV
Trigger: GACCAGGGGTCTACTGCACAAAACAGACCTCCGGAA...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
3UTR CCA 72 bp CAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTaGGATAGCTTACACGGAAAGAACAGTCATGTTTGG +
Preference number: 3 (lower is better)
Translates to: QGWSPAVRVPLR*DSLHGKNSHVW
Trigger: CCAAACATGACTGTTCTTTCCGTGTAAGCTATCCCACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR CAA 90 bp CGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCGCCACACAAAAGAACTaGGAAGCAAATCTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: RSSSSGRGSPQVCRGHTSATQKN*EANLLL
Trigger: GAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGC...GCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR GCA 72 bp CGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTTGATAGACATCAACAA +
Preference number: 3 (lower is better)
Translates to: RSSSSGRGSPQV*RGHTSLDRHQQ
Trigger: TTGTTGATGTCTATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR GCA 72 bp TGCCAACAGCCACACAAAAGAACTTGGAAGCAAATCTaGTCCTCGTTGAGCCTTGAGATCCCGTCTGATACC +
Preference number: 3 (lower is better)
Translates to: CQQPHKRTWKQI*SSLSLEIPSDT
Trigger: GGTATCAGACGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGCTGTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
3UTR TCA 72 bp CAGACTTCTGAATCCTCTCATTTTAGTCTAGGTCAGTaGTCTTCAACCTTGGCTGTGTACTGGACTCACCCT +
Preference number: 3 (lower is better)
Translates to: QTSESSHFSLGQ*SSTLAVYWTHP
Trigger: AGGGTGAGTCCAGTACACAGCCAAGGTTGAAGATCACTGACCTAGACTAAAATGAGAGGATTCAGAAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492993.5
3UTR-3UTR CAA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGAAAGAACAGTCATGTTaGGTGGTTTTTCTAGAGCAA +
Preference number: 3 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKKEQSC*VVFLEQ
Trigger: TTGCTCTAGAAAAACCACCAAACATGACTGTTCTTT...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR CAA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGGGGCTTCTGTATCTTaGTCTGAAAATTTCAAACTG +
Preference number: 3 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYGASVS*SENFKL
Trigger: CAGTTTGAAATTTTCAGACAAAGATACAGAAGCCCC...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000492993.5
3UTR TCA 72 bp GTGATCTTCAACCTTGGCTGTGTACTGGACTCACCCTaGGGGGCTTCTGTATCTTTGTCTGAAAATTTCAAA +
Preference number: 3 (lower is better)
Translates to: VIFNLGCVLDSP*GASVSLSENFK
Trigger: TTTGAAATTTTCAGACAAAGATACAGAAGCCCCTCAGGGTGAGTCCAGTACACAGCCAAGGTTGAAGATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492993.5
3UTR CCA 72 bp CCAACCTTGACAAGAGTAAAGAAAACAGCAAAAGCATaGAGACCTTTCGTCAGAAGTGGGAAGTTGCAATGT +
Preference number: 3 (lower is better)
Translates to: PTLTRVKKTAKA*RPFVRSGKLQC
Trigger: ACATTGCAACTTCCCACTTCTGACGAAAGGTCTCCATGCTTTTGCTGTTTTCTTTACTCTTGTCAAGGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR-3UTR CAA 90 bp AAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATCTAAAGACCAAGTCTGCCTaGATGACTTACCCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: KLSIPHTLKHIVTNSLYLKTKSA*MTYPEG
Trigger: CCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTT...TAGATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474690.5
3UTR TCA 72 bp TTTAATAAAGACCAAGTCTGCCTTGATGACTTACCCTaGGGGGCTTCTGTATCTTTGTCTGAAAATTTCAAA +
Preference number: 3 (lower is better)
Translates to: FNKDQVCLDDLP*GASVSLSENFK
Trigger: TTTGAAATTTTCAGACAAAGATACAGAAGCCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTTTATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CCA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCAGTCCACGGGCTCGTaGCTCGCCGGGCGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAQSTGS*LAGRFS
Trigger: AGAAAACCGCCCGGCGAGCCACGAGCCCGTGGACTG...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCAGCACAGCCATCTGTTACCGCGGCCGTaGGCCGTTCCCCCGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LFCAVDPWSRALEEQHSHLLPRP*AVPPQP
Trigger: AGGCTGCGGGGGAACGGCCCACGGCCGCGGTAACAG...ATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACTGGCTGCTCCCTCCTaGCCACATTGGGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGALAAPS*PHWGHG
Trigger: CCCGTGACCCCAATGTGGCCAGGAGGGAGCAGCCAG...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCAGCACAGCCATCGCCGGGCGGTTTTCTaGGGATCTGCGAAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LFCAVDPWSRALEEQHSHRRAVF*GSAKPP
Trigger: AGGGGGCTTCGCAGATCCCCAGAAAACCGCCCGGCG...ATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GTCCAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VQADLDPHLLEEAHHRFAGSPQV*RGHTSL
Trigger: AAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCC...TGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGGGTGGCTTGGTCCACTaGACATGTGATGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARGGLVH*TCDVPA
Trigger: AGCTGGTACATCACATGTGCAGTGGACCAAGCCACC...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp GGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACACTGGCTGCTCCCTCCTaGCCACATTGGGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: GVSEQDIHARGKRYEGVTLAAPS*PHWGHG
Trigger: CCCGTGACCCCAATGTGGCCAGGAGGGAGCAGCCAG...TGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCCTGGTCACGTGCTCTaGAAGAGCAGCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAPGHVL*KSSTAI
Trigger: GATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGG...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCGGATTACTGGGAAAGTaGGCCACTGCGAACGACAGG +
Preference number: 4 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAGLLGK*ATANDR
Trigger: CCTGTCGTTCGCAGTGGCTCACTTTCCCAGTAATCC...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCTGGAGTGCAGTGGCATaGTCTCGGCTTACTGCAACC +
Preference number: 4 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAWSAVA*SRLTAT
Trigger: GGTTGCAGTAAGCCGAGATCATGCCACTGCACTCCA...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp GACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACATGGCTTGGGAAAGTaGGCCACTGCGAACGACAGG +
Preference number: 4 (lower is better)
Translates to: DLDPHLLEEAHHRFAGATHGLGK*ATANDR
Trigger: CCTGTCGTTCGCAGTGGCTCACTTTCCCAAGCCATG...TGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACTCGCGACAAACCGCTaGGTGGATCAGCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGALATNR*VDQQAQ
Trigger: CTGGGCTTGCTGATCCACGCAGCGGTTTGTCGCGAG...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp GATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGAGCTCGGAGACTTTCTaGCTGCTCCCTCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DSGGLFCAVDPWSRALEESSETF*LLPPGH
Trigger: GTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCGAGCT...CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp GATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCGACAAACCGCTGCGTaGATCAGCAAGCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DSGGLFCAVDPWSRALEERQTAA*ISKPRA
Trigger: GGCTCTGGGCTTGCTGATCCACGCAGCGGTTTGTCG...CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGTCTTCCTGCTGCCCATaGCTCTGCAAAGAAGACGAA +
Preference number: 4 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARSSCCP*LCKEDE
Trigger: TTCGTCTTCTTTGCAGAGCCATGGGCAGCAGGAAGA...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGTCTTCCTGCTGCCCATaGCTTGGGAAAGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QADLDPHLLEEAHHRFAGSSCCP*LGKVSH
Trigger: GTGGCTCACTTTCCCAAGCCATGGGCAGCAGGAAGA...CCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGGGTCCACTGCACATGTaGTGTACCAGCTTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARGPLHM*CTSFSN
Trigger: ATTTGAGAAGCTGGTACATCACATGTGCAGTGGACC...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp AAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTAGCCCTCAGTCCTGGTaGGGATCAGGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: KFRFRRSVLCSRPLVTCSSPQSW*GSGGGL
Trigger: CAAGCCACCTCCTGATCCTCACCAGGACTGAGGGCT...AGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCTTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAFHGRH*RAFLCR
Trigger: ACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAA...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GVSEQDIHARGKRYEGVTGSPQV*RGHTSL
Trigger: AAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCC...TGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR GCA 90 bp GATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGAGACCCCTGGTCACGTaGTCTGGAAGAGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: DSGGLFCAVDPWSRALEERPLVT*SGRAAQ
Trigger: CTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCT...CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGCTGGCTGCTCCCTCCTaGCCACATTGGGGTCACGGG +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKLAAPS*PHWGHG
Trigger: CCCGTGACCCCAATGTGGCCAGGAGGGAGCAGCCAG...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp CGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAAGCCACCCGAGTAGCTaGATGACAGGTGCACACCAC +
Preference number: 4 (lower is better)
Translates to: RFRRSVLCSRPLVTCSGRSHPSS*MTGAHH
Trigger: GTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCT...TCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp AAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTTCAGCCTCACCGCCCTaGGGGGCTTCTGTATCTTTG +
Preference number: 4 (lower is better)
Translates to: KFRFRRSVLCSRPLVTCSSASPP*GASVSL
Trigger: CAAAGATACAGAAGCCCCTCAGGGCGGTGAGGCTGA...AGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp CAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGCTATACCTGGACTCCTaGCCCACAGAAACTGGGATA +
Preference number: 4 (lower is better)
Translates to: QADLDPHLLEEAHHRFAGLYLDS*PTETGI
Trigger: TATCCCAGTTTCTGTGGGTCAGGAGTCCAGGTATAG...CCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAAGAGGCCGGAGTCAGTaGGCCGGGCGCGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVRGRSQ*AGRGAA
Trigger: GGCTGCACCGCGCCCGGCGCACTGACTCCGGCCTCT...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGTGCTGCCCATGGCTCTaGAAAGAAGACGAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: DSGGLFCAVDPWSRALEECCPWL*KEDEAL
Trigger: CAGGGCTTCGTCTTCTTTGCAGAGCCATGGGCAGCA...CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACAGCAGTGGGGCATTTaGTCCTCTAACCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAQQWGI*SSNHSH
Trigger: GTGGCTGTGGTTAGAGGAGCAAATGCCCCACTGCTG...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp CGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGACGGAGGTCTGTTTTGTaGAGTAGACCCCTGGTCACG +
Preference number: 4 (lower is better)
Translates to: RFRRSVLCSRPLVTCSGRRRSVL*SRPLVT
Trigger: CGTGACCAGGGGTCTACTGCACAAAACAGACCTCCG...TCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp CAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGTTTCCTTCTTCCTGCTaGCCATGGCTTGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: QADLDPHLLEEAHHRFAGFPSSC*PWLGKV
Trigger: CACTTTCCCAAGCCATGGGCAGCAGGAAGAAGGAAA...CCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CCA 90 bp CATCTCCAGGGGGTTACAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTGTCATCAGTCTTTCCATaGGCCACTGCATCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: HLQGVTRLVTSSEGAAEVSSVFP*ATASGL
Trigger: TAAACCAGATGCAGTGGCCCATGGAAAGACTGATGA...CACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGTCCCTGCTGTTCTTATaGATTACTGGGAAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARSLLFL*ITGKVS
Trigger: GCTCACTTTCCCAGTAATCCATAAGAACAGCAGGGA...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCAGCACAGCCATCCAGCTGGTCTAGGATaGTTTTCTGCAGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFCAVDPWSRALEEQHSHPAGLG*FSAAVG
Trigger: CCCCACTGCTGCAGAAAACCATCCTAGACCAGCTGG...ATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTCTTCCTGCTGCCCATaGCTCGAGTCTGCCGCGACC +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKSSCCP*LESAAT
Trigger: GGTCGCGGCAGACTCGAGCCATGGGCAGCAGGAAGA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR GCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGCCCATGGCTCGAGTCTaGCGCGACCTAGCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWPMARV*RDLAAV
Trigger: GACCGCGGCTAGGTCGCGGCAGACTCGAGCCATGGG...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CCA 90 bp CATCTCCAGGGGGTTACAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTGATAAAACAGAAAGGTTaGCTCGCACTTCCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: HLQGVTRLVTSSEGAAEVIKQKG*LALPSV
Trigger: TACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTAT...CACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp GATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGTCCTCCCAAAGCTCTTaGGTGCTGATGTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: DSGGLFCAVDPWSRALEESSQSS*VLMLTC
Trigger: GCAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGA...CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTTGATAAGTCCCAGTGATGCCTaGCTCTCCTTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: HLLEEAHHRFAGATPALISPSDA*LSFHPL
Trigger: CAAAGGATGGAAGGAGAGCCAGGCATCACTGGGACT...TATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp CAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGTTAGTCCTTTGGAACTaGGCATTTCCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QADLDPHLLEEAHHRFAGLVLWN*AFPPKA
Trigger: AGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAA...CCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCAGGCAAATCAGCACACTaGTACAAAGTGAACACCCCG +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAGKSAH*YKVNTP
Trigger: CGGGGTGTTCACTTTGTATCAGTGTGCTGATTTGCC...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGCGGAGACTTTCTGGCTaGTCCCTCCTGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKRRLSG*SLLATL
Trigger: CAATGTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCG...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCAGGGAAAGTGAGCCACTaGGAACGACAGGTACAAGAT +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAGKVSH*ERQVQD
Trigger: ATCTTGTACCTGTCGTTCGCAGTGGCTCACTTTCCC...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTGAGCCTTGAGATCCCGCTGCTGCCCATGGCTTaGGAAAGTGAGCCACTGCGA +
Preference number: 4 (lower is better)
Translates to: PHKRTWKQICSSLSLEIPLLPMA*ESEPLR
Trigger: TCGCAGTGGCTCACTTTCCCAAGCCATGGGCAGCAG...CGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp TCGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAAGGTCCCTACGAAGATaGGGTGGGCACAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSEVGSCNVCPQNQGPYERSLRR*GGHRVA
Trigger: AGCCACTCTGTGCCCACCTCATCTTCGTAGGGACCT...TTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTGAGCCTTGAGATCCCGAGGTTCAAGTCCCAGTaGTGCCTGGCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PHKRTWKQICSSLSLEIPRFKSQ*CLALLP
Trigger: TGGAAGGAGAGCCAGGCATCACTGGGACTTGAACCT...CGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIGSPQV*RGHTSL
Trigger: AAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCC...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR GCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCATACCAGCTTCTCAAATaGCTCCTCTCCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAYQLLK*LLSSFV
Trigger: CACAAAGCTGGAGAGGAGGCATTTGAGAAGCTGGTA...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp CTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCAGCACAGCCATTCTAGGATGGTTTTCTaGAGCAGTGGGGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LFCAVDPWSRALEEQHSHSRMVF*SSGAFA
Trigger: AGCAAATGCCCCACTGCTGCAGAAAACCATCCTAGA...ATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp CATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTTGATACAATTTCCTTCTTCCTaGTGCCCATGGCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: HLLEEAHHRFAGATPALIQFPSS*CPWLGK
Trigger: TTTCCCAAGCCATGGGCAGCAGGAAGAAGGAAATTG...TATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp CATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTTGATACTGTTTCCTAATGACTaGAGTCCCAGGTTCAAGTCC +
Preference number: 4 (lower is better)
Translates to: HLLEEAHHRFAGATPALILFPND*SPRFKS
Trigger: GGACTTGAACCTGGGACTGCAGTCATTAGGAAACAG...TATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCAGCTCGGAGACTTTCTaGCTGCTCCCTCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDISSETF*LLPPGH
Trigger: GTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCGAGCT...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp GACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACAACTAAGCTATACCTaGACTCCTGACCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: DLDPHLLEEAHHRFAGATQLSYT*TPDPQK
Trigger: TTTCTGTGGGTCAGGAGTCCAGGTATAGCTTAGTTG...TGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CCA 90 bp GACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCACACAAAAGAACTTaGAAGCAAATCTGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DLDPHLLEEAHHRFAGATPHKRT*KQICSS
Trigger: CGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG...TGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCATTAGTCCTTTGGAACTaGGCATTTCCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGALVLWN*AFPPKA
Trigger: AGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAA...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGAGCCCTCAGTCCTGGTaGGGATCAGGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWSPQSW*GSGGGL
Trigger: CAAGCCACCTCCTGATCCTCACCAGGACTGAGGGCT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKFHGRH*RAFLCR
Trigger: ACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTATTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVFHGRH*RAFLCR
Trigger: ACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAA...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCAGTATCCTCTGAGATaGCACTTATATCTCACAACA +
Preference number: 4 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAQYPLR*HLYLTT
Trigger: TGTTGTGAGATATAAGTGTCATCTCAGAGGATACTG...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGCGGGAGGCTGAGACATaGGAACTGCTTGAACGTGAG +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARREAET*ELLERE
Trigger: CTCACGTTCAAGCAGTTCTCATGTCTCAGCCTCCCG...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR GCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCGGAGACTTTCTGGCTaGTCCCTCCTGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIRRLSG*SLLATL
Trigger: CAATGTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCG...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGGTCACCAACCGAGTCTaGCGCGACCTAGCCGCGGTC +
Preference number: 4 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLVTNRV*RDLAAV
Trigger: GACCGCGGCTAGGTCGCGGCAGACTCGGTTGGTGAC...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGGGACCCTGTTATCCCTaGTGTTCTTATGGATTACTG +
Preference number: 4 (lower is better)
Translates to: DSGGLFCAVDPWSRALEEGPCYP*CSYGLL
Trigger: CAGTAATCCATAAGAACAGCAGGGATAACAGGGTCC...CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp TCGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAATTTCCTTCTTCCTGCTaGCCATGGCTCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSEVGSCNVCPQNQGPYEFPSSC*PWLESA
Trigger: GGCAGACTCGAGCCATGGGCAGCAGGAAGAAGGAAA...TTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR GCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTAACTGAGATGAGATCATaGCGCTGCATTCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVTEMRS*RCIPAC
Trigger: GCAGGCTGGAATGCAGCGGCATGATCTCATCTCAGT...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CCA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATCTGTCCCGGCTTCCATaGACGGCATTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYLSRLP*TALKGI
Trigger: AATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAG...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCAGTTCTTATGGATTACTaGGAAAGTGAGCCACTGCGA +
Preference number: 4 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAVLMDY*ESEPLR
Trigger: TCGCAGTGGCTCACTTTCCCAGTAATCCATAAGAAC...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp TCGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAATTTCTGTGCCGTACTaGGCTCGGAGACTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSEVGSCNVCPQNQGPYEISVPY*ARRLSG
Trigger: GCCAGAAAGTCTCCGAGCTCAGTACGGCACAGAAAT...TTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGTCTAAGTGGAGTGTCTaGGCAGGACATCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARSKWSV*AGHPCQ
Trigger: CTGGCATGGATGTCCTGCTCAGACACTCCACTTAGA...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCAGGTGGAGGTTGCACTaGGATGAGATCATGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIRWRLH*DEIMPL
Trigger: CAGCGGCATGATCTCATCTCAGTGCAACCTCCACCT...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CCA 90 bp AAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTTCATCAGTCTTTCCATaGGCCACTGCATCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: KFRFRRSVLCSRPLVTCSSSVFP*ATASGL
Trigger: TAAACCAGATGCAGTGGCCCATGGAAAGACTGATGA...AGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGAGGGGGTTACAAGGCTaGTCACCAGCAGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWRGLQG*SPAVRV
Trigger: CACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp CAGCCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTGAGCCTTGAGATCTCCTCCCAAAGCTCTTaGGTGCTGATGTTGACCTGC +
Preference number: 4 (lower is better)
Translates to: QPHKRTWKQICSSLSLEISSQSS*VLMLTC
Trigger: GCAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGA...GATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CCA 90 bp GTCCAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCACTGACCCACAGAAACTaGGATAATCAATGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VQADLDPHLLEEAHHRFALTHRN*DNQCLL
Trigger: CAACAAACATTGATTATCCCAGTTTCTGTGGGTCAG...TGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTAGGTCCACTGCACATGTaGTGTACCAGCTTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVGPLHM*CTSFSN
Trigger: ATTTGAGAAGCTGGTACATCACATGTGCAGTGGACC...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp GGAGATGGACAGAGCCTTTATTGTATATATGCCCATTTAAAGATGGAAAGTGGGAGCCCTCAGTCCTGGTaGGGATCAGGAGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GDGQSLYCIYAHLKMESGSPQSW*GSGGGL
Trigger: CAAGCCACCTCCTGATCCTCACCAGGACTGAGGGCT...CCCACTTTCCATCTTTAAATGGGCATATATACAATAAAGGCTCTGTCCATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCGTACTGGACTCACCCTaGGGGGCTTCTGTATCTTTG +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIVLDSP*GASVSL
Trigger: CAAAGATACAGAAGCCCCTCAGGGTGAGTCCAGTAC...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp CTTCAACCTTGGCTGTGTACTGGACTCACCCTGAGGGGCTTCTGTATCTTTGTCTTGGCTGAAACATCCTaGGGTTTTCCACTCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LQPWLCTGLTLRGFCIFVLAETS*GFPLSH
Trigger: ATGAGAGAGTGGAAAACCTCAGGATGTTTCAGCCAA...GACAAAGATACAGAAGCCCCTCAGGGTGAGTCCAGTACACAGCCAAGGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492993.5
CDS-3UTR TCA 90 bp CCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTGAGCCTTGAGATCCCGTCTCCTTCCATCCTTTaGGTTCCAAGAGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: PHKRTWKQICSSLSLEIPSPSIL*VPRDPC
Trigger: ACAGGGATCTCTTGGAACTCAAAGGATGGAAGGAGA...CGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLGSPQV*RGHTSL
Trigger: AAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCC...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTACGGAGACTTTCTGGCTaGTCCCTCCTGGCCACATTG +
Preference number: 4 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVRRLSG*SLLATL
Trigger: CAATGTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCG...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGTGAGAGGTGGAGGTTaGACTGAGATGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARVRGGG*TEMRSC
Trigger: GCATGATCTCATCTCAGTGCAACCTCCACCTCTCAC...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CCA 90 bp AAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTATAAAACAGAAAGGTTaGCTCGCACTTCCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KFRFRRSVLCSRPLVTCSIKQKG*LALPSV
Trigger: TACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTAT...AGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCGATCAGGAGGTGGCTTaGTCCACTGCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIDQEVA*STAHVM
Trigger: CATCACATGTGCAGTGGACCAAGCCACCTCCTGATC...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGAGGGTGCCGCTGAGGTaGGATAGCTTACACGGAAAG +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWRVPLR*DSLHGK
Trigger: CTTTCCGTGTAAGCTATCCCACCTCAGCGGCACCCT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTTAGTCCTTTGGAACTaGGCATTTCCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKLVLWN*AFPPKA
Trigger: AGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTATTAGTCCTTTGGAACTaGGCATTTCCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVLVLWN*AFPPKA
Trigger: AGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAA...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGATTTCTGTGCCGTACTaGGCTCGGAGACTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWISVPY*ARRLSG
Trigger: GCCAGAAAGTCTCCGAGCTCAGTACGGCACAGAAAT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGGAGGTTGCACTGAGATaGGATCATGCCGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWEVALR*DHAAAF
Trigger: GAATGCAGCGGCATGATCTCATCTCAGTGCAACCTC...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR GCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGCTTTCCATGGGCCACTaGATCTGGTTTAATGATGGC +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARLSMGH*IWFNDG
Trigger: GCCATCATTAAACCAGATGCAGTGGCCCATGGAAAG...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR GCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGTACCAGCTTCTCAAATaGCTCCTCTCCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARYQLLK*LLSSFV
Trigger: CACAAAGCTGGAGAGGAGGCATTTGAGAAGCTGGTA...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp TTAGGTCTGCCAACAGCCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTGGGAAAGTGAGCCACTaGGAACGACAGGTACAAGAT +
Preference number: 4 (lower is better)
Translates to: LGLPTATQKNLEANLLLVGKVSH*ERQVQD
Trigger: ATCTTGTACCTGTCGTTCGCAGTGGCTCACTTTCCC...AACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGCTGTTGGCAGACCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTCATCAGTCTTTCCATaGGCCACTGCATCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKSSVFP*ATASGL
Trigger: TAAACCAGATGCAGTGGCCCATGGAAAGACTGATGA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGAGTGATCTTCAACCTTaGCTGTGTACTGGACTCACC +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARSDLQP*LCTGLT
Trigger: GGTGAGTCCAGTACACAGCCAAGGTTGAAGATCACT...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTATGTGCAGTAGACCCCTaGTCACGTGCTCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVCAVDP*SRALEE
Trigger: CTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACA...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCTCCTCCCAAAGCTCTTaGGTGCTGATGTTGACCTGT +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDISSQSS*VLMLTC
Trigger: ACAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGA...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR TCA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATTTAGTCCTTTGGAACTaGGCATTTCCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYLVLWN*AFPPKA
Trigger: AGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAA...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATAGGTCCCTACGAAGATaGGGTGGGCACAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYRSLRR*GGHRVA
Trigger: AGCCACTCTGTGCCCACCTCATCTTCGTAGGGACCT...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp GCCTTGATAGACATCAACAACCACAGCCTCATGAGTGAGCTTGGAAGTGGATCTAGTGCAACAAATAACTaGTGCCAGGAGGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: ALIDINNHSLMSELGSGSSATNN*CQEDRD
Trigger: ATCCCTATCCTCCTGGCATCAGTTATTTGTTGCACT...AGATCCACTTCCAAGCTCACTCATGAGGCTGTGGTTGTTGATGTCTATCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR GCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCGAAAAGTCGCACTTCTaGCTCTGTCATGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIEKSHF*LCHGSL
Trigger: GAGAGAACCATGACAGAGGCAGAAGTGCGACTTTTC...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR GCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTATCAGAAGTGGGAAGTTaGAATGTGTGTCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVSEVGS*NVCPQN
Trigger: ATTTTGGGGACACACATTGCAACTTCCCACTTCTGA...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGCAATTTCCTTCTTCCTaGTGCCCATGGCTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWQFPSS*CPWLES
Trigger: AGACTCGAGCCATGGGCAGCAGGAAGAAGGAAATTG...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTAGCTCGGAGACTTTCTaGCTGCTCCCTCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVSSETF*LLPPGH
Trigger: GTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCGAGCT...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGCTGTCCCGGCTTCCATaGACGGCATTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLLSRLP*TALKGI
Trigger: AATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAG...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATAGGGGGTTACAAGGCTaGTCACCAGCAGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYRGLQG*SPAVRV
Trigger: CACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCT...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATACCTTTCGTCAGAAGTaGGAAGTTGCAATGTGTGTC +
Preference number: 4 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYTFRQK*EVAMCV
Trigger: GACACACATTGCAACTTCCCACTTCTGACGAAAGGT...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR CAA 72 bp CCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTaGAGCCTTGAGATCCCGTCTGATACCTTAACTACC +
Preference number: 4 (lower is better)
Translates to: PHKRTWKQICSS*SLEIPSDTLTT
Trigger: GGTAGTTAAGGTATCAGACGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR TCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGGGTCCACTGCACATGTaGTGTACCAGCTTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWGPLHM*CTSFSN
Trigger: ATTTGAGAAGCTGGTACATCACATGTGCAGTGGACC...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGATTTCTGTGCCGTACTaGGCTCGGAGACTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLISVPY*ARRLSG
Trigger: GCCAGAAAGTCTCCGAGCTCAGTACGGCACAGAAAT...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTAAATGAGGACAGAGAGTaGTTGTGCATATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVNEDRE*LCISVR
Trigger: TCTTACTGATATGCACAATCACTCTCTGTCCTCATT...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTAGATGGGAAGTTCCACTaGACATCCATGTCATATTTA +
Preference number: 4 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVDGKFH*TSMSYL
Trigger: TAAATATGACATGGATGTTCAGTGGAACTTCCCATC...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp AGACAGCTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGACACACTGATACAAAGTaGACACCCCGCGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RQLNQKVLVLKRVSSDSGHTDTK*TPREEA
Trigger: CGCTTCCTCGCGGGGTGTTCACTTTGTATCAGTGTG...TCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAGCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATATTTCTGTGCCGTACTaGGCTCGGAGACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYISVPY*ARRLSS
Trigger: GCTGGAGAGTCTCCGAGCTCAGTACGGCACAGAAAT...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492993.5
CDS-3UTR GCA 90 bp CAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTT +
Preference number: 4 (lower is better)
Translates to: QKLSIPHTLKHIVTNSLYGSPQV*RGHTSL
Trigger: AAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCC...ATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR GCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGCTTTCCATGGGCCACTaGATCTGGTTTAATGATGGC +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWLSMGH*IWFNDG
Trigger: GCCATCATTAAACCAGATGCAGTGGCCCATGGAAAG...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCTCATCAGTCTTTCCATaGGCCACTGCATCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDISSVFP*ATASGL
Trigger: TAAACCAGATGCAGTGGCCCATGGAAAGACTGATGA...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGGATCAGGAGGTGGCTTaGTCCACTGCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLDQEVA*STAHVM
Trigger: CATCACATGTGCAGTGGACCAAGCCACCTCCTGATC...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATCTGTCCCGGCTTCCATaGACGGCATTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYLSRLP*TALKGI
Trigger: AATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAG...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATAGGGTGCCGCTGAGGTaGGATAGCTTACACGGAAAG +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYRVPLR*DSLHGK
Trigger: CTTTCCGTGTAAGCTATCCCACCTCAGCGGCACCCT...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTATTTTCGGCCTCCAGCTaGTCTAGGATGGTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVFSASS*SRMVFC
Trigger: GCAGAAAACCATCCTAGACCAGCTGGAGGCCGAAAA...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGAATGAGGACAGAGAGTaGTTGTGCATATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARNEDRE*LCISVR
Trigger: TCTTACTGATATGCACAATCACTCTCTGTCCTCATT...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATTCTAAGTGGAGTGTCTaGGCAGGACATCCATGCCAG +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYSKWSV*AGHPCQ
Trigger: CTGGCATGGATGTCCTGCTCAGACACTCCACTTAGA...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGATGGGAAGTTCCACTaGACATCCATGTCATATTTA +
Preference number: 4 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYDGKFH*TSMSYL
Trigger: TAAATATGACATGGATGTTCAGTGGAACTTCCCATC...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp AAGTCTGCCTTGATGACTTACCCTGAGGGGCTTCTGTATCTTTGTCTGAAAATTGAAAAGTCGCACTTCTaGCTCTGTCATGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KSALMTYPEGLLYLCLKIEKSHF*LCHGSL
Trigger: GAGAGAACCATGACAGAGGCAGAAGTGCGACTTTTC...AATTTTCAGACAAAGATACAGAAGCCCCTCAGGGTAAGTCATCAAGGCAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR GCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGGTGGCTTGGTCCACTaGACATGTGATGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYGGLVH*TCDVPA
Trigger: AGCTGGTACATCACATGTGCAGTGGACCAAGCCACC...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTACAATTTCCTTCTTCCTaGTGCCCATGGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVQFPSS*CPWLCK
Trigger: TTTGCAGAGCCATGGGCAGCAGGAAGAAGGAAATTG...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCATAAAACAGAAAGGTTaGCTCGCACTTCCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIIKQKG*LALPSV
Trigger: TACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTAT...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTCTGTCCCGGCTTCCATaGACGGCATTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVLSRLP*TALKGI
Trigger: AATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAG...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTGGAAAGGTAGTTTTTaGATCAAGGTAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKWKGSF*IKVDRL
Trigger: AAGCCTATCTACCTTGATCCAAAAACTACCTTTCCA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTTTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVFHGRH*RAFLCR
Trigger: ACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAA...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR TCA 90 bp CAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATATTTCTGTGCCGTACTaGGCTCGGAGACTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QKLSIPHTLKHIVTNSLYISVPY*ARRLSS
Trigger: GCTGGAGAGTCTCCGAGCTCAGTACGGCACAGAAAT...ATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR GCA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGCTTTCCATGGGCCACTaGATCTGGTTTAATGATGGC +
Preference number: 4 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLLSMGH*IWFNDG
Trigger: GCCATCATTAAACCAGATGCAGTGGCCCATGGAAAG...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp GGAGATGGACAGAGCCTTTATTGTATATATGCCCATTTAAAGATGGAAAGTGGGGAAAAGTCGCACTTCTaGCTCTGTCATGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GDGQSLYCIYAHLKMESGEKSHF*LCHGSL
Trigger: GAGAGAACCATGACAGAGGCAGAAGTGCGACTTTTC...CCCACTTTCCATCTTTAAATGGGCATATATACAATAAAGGCTCTGTCCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTGGTGGCTTGGTCCACTaGACATGTGATGTACCAGCT +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVGGLVH*TCDVPA
Trigger: AGCTGGTACATCACATGTGCAGTGGACCAAGCCACC...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTACACCAGTTCTCCTCCTaGATAAAACAGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVHQFSS*IKQKGW
Trigger: CCAACCTTTCTGTTTTATGCAGGAGGAGAACTGGTG...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTGATCAGGAGGTGGCTTaGTCCACTGCACATGTGATG +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVDQEVA*STAHVM
Trigger: CATCACATGTGCAGTGGACCAAGCCACCTCCTGATC...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp CAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATCTGTCCCGGCTTCCATaGACGGCATTGAAGGGCATT +
Preference number: 4 (lower is better)
Translates to: QKLSIPHTLKHIVTNSLYLSRLP*TALKGI
Trigger: AATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAG...ATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CCA 90 bp TCGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAATGGAAAGGTAGTTTTTaGATCAAGGTAGATAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSEVGSCNVCPQNQGPYEWKGSF*IKVDRL
Trigger: AAGCCTATCTACCTTGATCCAAAAACTACCTTTCCA...TTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp AGACAGCTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTTTTCTGCAGCAGTaGGGCATTTGCTCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: RQLNQKVLVLKRVSSDSGGFLQQ*GICSSN
Trigger: GTTAGAGGAGCAAATGCCCCACTGCTGCAGAAAACC...TCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAGCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR TCA 90 bp AAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATCTATTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KLSIPHTLKHIVTNSLYLFHGRH*RAFLCR
Trigger: ACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAA...TAGATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR TCA 90 bp AGGACAGTGAAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCGACAGAGTAAAGATGTaGGAACATTATGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: RTVKKGNCLLSGVSEQDIDRVKM*EHYGKV
Trigger: TACCTTTCCATAATGTTCTCACATCTTTACTCTGTC...GATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTTCACTGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATCTTTCCATGGGCCACTaGATCTGGTTTAATGATGGC +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYLSMGH*IWFNDG
Trigger: GCCATCATTAAACCAGATGCAGTGGCCCATGGAAAG...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR GCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGAAAAGTCGCACTTCTaGCTCTGTCATGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYEKSHF*LCHGSL
Trigger: GAGAGAACCATGACAGAGGCAGAAGTGCGACTTTTC...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR GCA 90 bp AGACAGCTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGAAAAGTCGCACTTCTaGCTCTGTCATGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RQLNQKVLVLKRVSSDSGEKSHF*LCHGSL
Trigger: GAGAGAACCATGACAGAGGCAGAAGTGCGACTTTTC...TCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAGCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CCA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATATGGGCCACTGCATCTaGTTTAATGATGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYMGHCI*FNDGQG
Trigger: ACCTTGGCCATCATTAAACCAGATGCAGTGGCCCAT...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CCA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGAAAACAGCAAAAGCATaGAGACCTTTCGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWKTAKA*RPFVRS
Trigger: ACTTCTGACGAAAGGTCTCCATGCTTTTGCTGTTTT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CCA 90 bp AGACAGCTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAAGGGTTTCACCATGTTaGCTAGGCTGGTGTCAAACT +
Preference number: 4 (lower is better)
Translates to: RQLNQKVLVLKRVSSDSGRVSPC*LGWCQT
Trigger: AGTTTGACACCAGCCTAGCCAACATGGTGAAACCCT...TCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAGCTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR GCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTTACCAGCTTCTCAAATaGCTCCTCTCCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVYQLLK*LLSSFV
Trigger: CACAAAGCTGGAGAGGAGGCATTTGAGAAGCTGGTA...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR GCA 90 bp GGAGATGGACAGAGCCTTTATTGTATATATGCCCATTTAAAGATGGAAAGTGGGTCAGAAGTGGGAAGTTaGAATGTGTGTCCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: GDGQSLYCIYAHLKMESGSEVGS*NVCPQN
Trigger: ATTTTGGGGACACACATTGCAACTTCCCACTTCTGA...CCCACTTTCCATCTTTAAATGGGCATATATACAATAAAGGCTCTGTCCATCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp GGAGATGGACAGAGCCTTTATTGTATATATGCCCATTTAAAGATGGAAAGTGGGAATGAGGACAGAGAGTaGTTGTGCATATCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GDGQSLYCIYAHLKMESGNEDRE*LCISVR
Trigger: TCTTACTGATATGCACAATCACTCTCTGTCCTCATT...CCCACTTTCCATCTTTAAATGGGCATATATACAATAAAGGCTCTGTCCATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp CAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATCTTGATGACTTACCCTaGGGGGCTTCTGTATCTTTG +
Preference number: 4 (lower is better)
Translates to: QKLSIPHTLKHIVTNSLYLDDLP*GASVSL
Trigger: CAAAGATACAGAAGCCCCTCAGGGTAAGTCATCAAG...ATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR GCA 90 bp CAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATCTTTCCATGGGCCACTaGATCTGGTTTAATGATGGC +
Preference number: 4 (lower is better)
Translates to: QKLSIPHTLKHIVTNSLYLSMGH*IWFNDG
Trigger: GCCATCATTAAACCAGATGCAGTGGCCCATGGAAAG...ATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CCA 90 bp CCAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATCATCAGTCTTTCCATaGGCCACTGCATCTGGTTTA +
Preference number: 4 (lower is better)
Translates to: PKIINPPHTQAHSYKFLVSSVFP*ATASGL
Trigger: TAAACCAGATGCAGTGGCCCATGGAAAGACTGATGA...TACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CCA 90 bp CCAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTAATAAAACAGAAAGGTTaGCTCGCACTTCCCTCTGTA +
Preference number: 4 (lower is better)
Translates to: PKIINPPHTQAHSYKFLVIKQKG*LALPSV
Trigger: TACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTAT...TACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTAAAACAGCAAAAGCATaGAGACCTTTCGTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVKTAKA*RPFVRS
Trigger: ACTTCTGACGAAAGGTCTCCATGCTTTTGCTGTTTT...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR TCA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTGACAGAGTAAAGATGTaGGAACATTATGGAAAGGTA +
Preference number: 4 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVDRVKM*EHYGKV
Trigger: TACCTTTCCATAATGTTCTCACATCTTTACTCTGTC...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
3UTR CAA 72 bp GTTATATATAAGAGATGGAGATGGACAGAGCCTTTATaGTATATATGCCCATTTAAAGATGGAAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VIYKRWRWTEPL*YICPFKDGKWG
Trigger: TCCCCACTTTCCATCTTTAAATGGGCATATATACAATAAAGGCTCTGTCCATCTCCATCTCTTATATATAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS CCA 90 bp TGCCCATGGCTCTGCAAAGAAGACGAAGCCCTGTTACCGCGGCCGTaGGCCGTTCCCCCGCAGCCTCGCGACAAACCGCTGCGTGGATCA +
Preference number: 5 (lower is better)
Translates to: CPWLCKEDEALLPRP*AVPPQPRDKPLRGS
Trigger: TGATCCACGCAGCGGTTTGTCGCGAGGCTGCGGGGGAACGGCCCACGGCCGCGGTAACAGGGCTTCGTCTTCTTTGCAGAGCCATGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp GGGTTCAAGCGATTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACAGTGGGCCCCGCTGTaGCTTCAGCCTCACCGCCCT +
Preference number: 5 (lower is better)
Translates to: GFKRFSCLSHPSSWMTGAQWAPL*LQPHRP
Trigger: AGGGCGGTGAGGCTGAAGCAACAGCGGGGCCCACTG...TGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAATCGCTTGAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGCTTCCATGGACGGCATaGAAGGGCATTTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARLPWTA*KGISVP
Trigger: CGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAG...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS GCA 90 bp GGTGGAGGTTGCACTGAGATGAGATCATGCCGCTGCATTCCAGCCTaGAGGGCAATTTCCTTCTTCCTGCTGCCCATGGCTCGAGTCTGC +
Preference number: 5 (lower is better)
Translates to: GGGCTEMRSCRCIPA*RAISFFLLPMARVC
Trigger: GCAGACTCGAGCCATGGGCAGCAGGAAGAAGGAAATTGCCCTGCAGGCTGGAATGCAGCGGCATGATCTCATCTCAGTGCAACCTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CAA 90 bp TTCTCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCGGATCAGGAGGTGGCTaGGTCCACTGCACATGTGAT +
Preference number: 5 (lower is better)
Translates to: FSCLSHPSSWMTGAHHHAGSGGG*VHCTCD
Trigger: ATCACATGTGCAGTGGACCAAGCCACCTCCTGATCC...GGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS GCA 90 bp GGGAGGCTGAGACATGAGAACTGCTTGAACGTGAGAGGTGGAGGTTaGACTGAGATGAGATCATGCCGCTGCATTCCAGCCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GRLRHENCLNVRGGG*TEMRSCRCIPACRA
Trigger: TGCCCTGCAGGCTGGAATGCAGCGGCATGATCTCATCTCAGTGCAACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCTCAGCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS CCA 90 bp CACGTCCTCGAAGCCCTCAGTCCTGGTGAGGATCAGGAGGTGGCTTaGTCCACTGCACATGTGATGTACCAGCTTCTCAAATGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: HVLEALSPGEDQEVA*STAHVMYQLLKCLL
Trigger: GAGGAGGCATTTGAGAAGCTGGTACATCACATGTGCAGTGGACCAAGCCACCTCCTGATCCTCACCAGGACTGAGGGCTTCGAGGACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS TCA 90 bp GTTCTCTGTCAGCATCTTCTCTGTCCCGGCTTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGTACTGAGCTCGGAGACTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: VLCQHLLCPGFHGRH*RAFLCRTELGDSPA
Trigger: AGCTGGAGAGTCTCCGAGCTCAGTACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAGAGAAGATGCTGACAGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474690.5
ENST00000492993.5
CDS-3UTR CAA 90 bp CAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGTGCCAGTTAGTCCTTaGGAACTGAGCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: QADLDPHLLEEAHHRFAGVPVSP*ELSISS
Trigger: GGAGGAAATGCTCAGTTCCAAAGGACTAACTGGCAC...CCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CAA 90 bp CAGGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGCTCTCCTTCCATCCTTaGAGTTCCAAGAGATCCCTG +
Preference number: 5 (lower is better)
Translates to: QADLDPHLLEEAHHRFAGLSFHP*SSKRSL
Trigger: CAGGGATCTCTTGGAACTCAAAGGATGGAAGGAGAG...CCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CAA 90 bp CATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTTGATAGGGGCCACACCAGCCTaGATAGACATCAACAACCAC +
Preference number: 5 (lower is better)
Translates to: HLLEEAHHRFAGATPALIGATPA*IDINNH
Trigger: GTGGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCC...TATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS TCA 90 bp GTTCTCTGTCAGCATCTTCTCTGTCCCGGCTTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGTACTGAGCTCGGAGACTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VLCQHLLCPGFHGRH*RAFLCRTELGDFLA
Trigger: AGCCAGAAAGTCTCCGAGCTCAGTACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAGAGAAGATGCTGACAGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS GCA 90 bp GGCCGACCTCGATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTaGAGGGGCCACACCAGCCTTGATAGACATCAACAACAGTTAGTC +
Preference number: 5 (lower is better)
Translates to: GRPRSSSSGRGSPQV*RGHTSLDRHQQQLV
Trigger: GACTAACTGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGATCGAGGTCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000475751.5
ENST00000478220.5
ENST00000484930.5
ENST00000492993.5
CDS GCA 90 bp TTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTaGTCTGGAAGAGCAGCACAGCCATCTCAATCCACATCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: FRFRRSVLCSRPLVT*SGRAAQPSQSTSSG
Trigger: TCCTGAGGATGTGGATTGAGATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS GCA 90 bp TTGAACGTGAGAGGTGGAGGTTGCACTGAGATGAGATCATGCCGCTaGATTCCAGCCTGCAGGGCAATTTCCTTCTTCCTGCTGCCCATG +
Preference number: 5 (lower is better)
Translates to: LNVRGGGCTEMRSCR*IPACRAISFFLLPM
Trigger: CATGGGCAGCAGGAAGAAGGAAATTGCCCTGCAGGCTGGAATGCAGCGGCATGATCTCATCTCAGTGCAACCTCCACCTCTCACGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CAA 90 bp CATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTTGATATCTTGGGTGCTGATGTaGACCTGCAGGGCAATTTCC +
Preference number: 5 (lower is better)
Translates to: HLLEEAHHRFAGATPALISWVLM*TCRAIS
Trigger: GGAAATTGCCCTGCAGGTCAACATCAGCACCCAAGA...TATCAAGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS TCA 90 bp TCAGTCCTGGTGAGGATCAGGAGGTGGCTTGGTCCACTGCACATGTaGTGTACCAGCTTCTCAAATGCCTCCTCTCCAGCTTTGTGTTGG +
Preference number: 5 (lower is better)
Translates to: SVLVRIRRWLGPLHM*CTSFSNASSPALCW
Trigger: CCAACACAAAGCTGGAGAGGAGGCATTTGAGAAGCTGGTACATCACATGTGCAGTGGACCAAGCCACCTCCTGATCCTCACCAGGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS TCA 90 bp ATGGGACCCTGTTATCCCTGCTGTTCTTATGGATTACTGGGAAAGTaGGCCACTGCGAACGACAGGTACAAGATCTTCGACGCGCCCGGA +
Preference number: 5 (lower is better)
Translates to: MGPCYPCCSYGLLGK*ATANDRYKIFDAPG
Trigger: TCCGGGCGCGTCGAAGATCTTGTACCTGTCGTTCGCAGTGGCTCACTTTCCCAGTAATCCATAAGAACAGCAGGGATAACAGGGTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTATCCCTCCTGGCCACATaGGGGTCACGGGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVSLLAT*GSRGPM
Trigger: CATGGGCCCCCGTGACCCCAATGTGGCCAGGAGGGA...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp CATCTCCAGGGGGTTACAAGGCTGGTCACCAGCAGTGAGGGTGCCGCTGAGGTGGGGGCTTCTGTATCTTaGTCTGAAAATTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: HLQGVTRLVTSSEGAAEVGASVS*SENFKL
Trigger: CAGTTTGAAATTTTCAGACAAAGATACAGAAGCCCC...CACCTCAGCGGCACCCTCACTGCTGGTGACCAGCCTTGTAACCCCCTGGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp AAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTTCTTGGGTGCTGATGTaGACCTGCAGGGCAATTTCC +
Preference number: 5 (lower is better)
Translates to: KFRFRRSVLCSRPLVTCSSWVLM*TCRAIS
Trigger: GGAAATTGCCCTGCAGGTCAACATCAGCACCCAAGA...AGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp AAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTTTCCTCCCAAAGCTCTaGGGTGCTGATGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: KFRFRRSVLCSRPLVTCSFLPKL*GADVDL
Trigger: CAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGAA...AGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp GGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACATTCCTCCCAAAGCTCTaGGGTGCTGATGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: GVSEQDIHARGKRYEGVTFLPKL*GADVDL
Trigger: CAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGAA...TGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CAA 90 bp ATCCTCATCTTCTGGAAGAGGCTCACCACAGGTTTGCAGGGGCCACACCAGCCTGCCACACAAAAGAACTaGGAAGCAAATCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ILIFWKRLTTGLQGPHQPATQKN*EANLLL
Trigger: GAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGGC...AGGCTGGTGTGGCCCCTGCAAACCTGTGGTGAGCCTCTTCCAGAAGATGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS CCA 90 bp AGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAGACCCCTaGTCACGTGCTCTGGAAGAGCAGCACAGCCATCTCAATCCACAT +
Preference number: 5 (lower is better)
Translates to: RVSSDSGGLFCAVDP*SRALEEQHSHLNPH
Trigger: ATGTGGATTGAGATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp TCATGCCTAAGCCACCCGAGTAGCTGGATGACAGGTGCACACCACCACGCCCGGTGGTTCTCTCTTCATTaGTTAGAATTTCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: SCLSHPSSWMTGAHHHARWFSLH*LEFQTQ
Trigger: CTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCA...CCGGGCGTGGTGGTGTGCACCTGTCATCCAGCTACTCGGGTGGCTTAGGCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTAGGATCAGGAGGTGGCTaGGTCCACTGCACATGTGAT +
Preference number: 5 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVGSGGG*VHCTCD
Trigger: ATCACATGTGCAGTGGACCAAGCCACCTCCTGATCC...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGGGATCAGGAGGTGGCTaGGTCCACTGCACATGTGAT +
Preference number: 5 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKGSGGG*VHCTCD
Trigger: ATCACATGTGCAGTGGACCAAGCCACCTCCTGATCC...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS GCA 90 bp GTTGACCTGTTTTACCAGCTACTCGGGAGGCTGAGACATGAGAACTaGTTGAACGTGAGAGGTGGAGGTTGCACTGAGATGAGATCATGC +
Preference number: 5 (lower is better)
Translates to: VDLFYQLLGRLRHEN*LNVRGGGCTEMRSC
Trigger: GCATGATCTCATCTCAGTGCAACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCTCAGCCTCCCGAGTAGCTGGTAAAACAGGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CAA 90 bp GGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACACTCTCCAGCTTTGTGTaGGTAGAAAAGTCGCACTTC +
Preference number: 5 (lower is better)
Translates to: GVSEQDIHARGKRYEGVTLSSFV*VEKSHF
Trigger: GAAGTGCGACTTTTCTACCAACACAAAGCTGGAGAG...TGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATCTTCCATGGACGGCATaGAAGGGCATTTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYLPWTA*KGISVP
Trigger: CGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAG...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp CCACACAAAAGAACTTGGAAGCAAATCTGCTCCTCGTTGAGCCTTGAGATCCCGTTCCTCCCAAAGCTCTaGGGTGCTGATGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: PHKRTWKQICSSLSLEIPFLPKL*GADVDL
Trigger: CAGGTCAACATCAGCACCCAAGAGCTTTGGGAGGAA...CGGGATCTCAAGGCTCAACGAGGAGCAGATTTGCTTCCAAGTTCTTTTGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS-3UTR CAA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTTCCCTCCTGGCCACATaGGGGTCACGGGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVSLLAT*GSRGPM
Trigger: CATGGGCCCCCGTGACCCCAATGTGGCCAGGAGGGA...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS CCA 90 bp AAAACGACATGGGACCCTGTTATCCCTGCTGTTCTTATGGATTACTaGGAAAGTGAGCCACTGCGAACGACAGGTACAAGATCTTCGACG +
Preference number: 5 (lower is better)
Translates to: KTTWDPVIPAVLMDY*ESEPLRTTGTRSST
Trigger: CGTCGAAGATCTTGTACCTGTCGTTCGCAGTGGCTCACTTTCCCAGTAATCCATAAGAACAGCAGGGATAACAGGGTCCCATGTCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp CTGTTTTGTGCAGTAGACCCCTGGTCACGTGCTCTGGAAGAGCAGCACAGCCATGGGGCTTCTGTATCTTaGTCTGAAAATTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: LFCAVDPWSRALEEQHSHGASVS*SENFKL
Trigger: CAGTTTGAAATTTTCAGACAAAGATACAGAAGCCCC...ATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGGTCAGAAGTGGGAAGTaGCAATGTGTGTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKVRSGK*QCVSPK
Trigger: TTTTGGGGACACACATTGCAACTTCCCACTTCTGAC...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp AAAAAGGGAAACTGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGAGACATGAGAACTGCTaGAACGTGAGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: KKGNCLLSGVSEQDIHARRHENC*NVRGGG
Trigger: ACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCT...CCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACAGTTTCCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CAA 90 bp GGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACATGGTTCTCTCTTCATTaGTTAGAATTTCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: GVSEQDIHARGKRYEGVTWFSLH*LEFQTQ
Trigger: CTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCA...TGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp GGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAAGAACAGTCATGTTaGGTGGTTTTTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: GVSEQDIHARGKRYEGVTKEQSC*VVFLEQ
Trigger: TTGCTCTAGAAAAACCACCAAACATGACTGTTCTTT...TGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp CTAAACCAAAAAGTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTCCGGAGGTCTGTTTaGTGCAGTAGACCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: LNQKVLVLKRVSSDSGGLFRRSV*CSRPLV
Trigger: GACCAGGGGTCTACTGCACAAAACAGACCTCCGGAA...CAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATACTTTTTGGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp TTGGCTGTGTACTGGACTCACCCTGAGGGGCTTCTGTATCTTTGTCTGAAAATTACAACAGTTAGTCCTTaGGAACTGAGCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LAVYWTHPEGLLYLCLKITTVSP*ELSISS
Trigger: GGAGGAAATGCTCAGTTCCAAAGGACTAACTGTTGT...AATTTTCAGACAAAGATACAGAAGCCCCTCAGGGTGAGTCCAGTACACAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492993.5
CDS-3UTR CAA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGCTCTCCAGCTTTGTGTaGGTAGAAAAGTCGCACTTC +
Preference number: 5 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWLSSFV*VEKSHF
Trigger: GAAGTGCGACTTTTCTACCAACACAAAGCTGGAGAG...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGACAACAGTTAGTCCTTaGGAACTGAGCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWTTVSP*ELSISS
Trigger: GGAGGAAATGCTCAGTTCCAAAGGACTAACTGTTGT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGGGGCCACACCAGCCTaGATAGACATCAACAACAGT +
Preference number: 5 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYGATPA*IDINNS
Trigger: ACTGTTGTTGATGTCTATCAAGGCTGGTGTGGCCCC...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp CTGAGCAGGACATCCATGCCAGGGGGAAAAGATATGAGGGAGTCACAAAGAGTATGGTTCTCTCTTCATTaGTTAGAATTTCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: LSRTSMPGGKDMRESQRVWFSLH*LEFQTQ
Trigger: CTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCA...TACTCTTTGTGACTCCCTCATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTACTCTCCAGCTTTGTGTaGGTAGAAAAGTCGCACTTC +
Preference number: 5 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVLSSFV*VEKSHF
Trigger: GAAGTGCGACTTTTCTACCAACACAAAGCTGGAGAG...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp GATTTAATAAAGACCAAGTCTGCCTTGATGACTTACCCTGAGGGGCTTCTGTATCTCTCCAGCTTTGTGTaGGTAGAAAAGTCGCACTTC +
Preference number: 5 (lower is better)
Translates to: DLIKTKSALMTYPEGLLYLSSFV*VEKSHF
Trigger: GAAGTGCGACTTTTCTACCAACACAAAGCTGGAGAG...ATACAGAAGCCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTTTATTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CAA 90 bp CCAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTACTTCCATGGACGGCATaGAAGGGCATTTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: PKIINPPHTQAHSYKFLVLPWTA*KGISVP
Trigger: CGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAG...TACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CAA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTCTTCCATGGACGGCATaGAAGGGCATTTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVLPWTA*KGISVP
Trigger: CGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAG...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp TCGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGGGGCTTCTGTATCTTaGTCTGAAAATTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: SSEVGSCNVCPQNQGPYEGASVS*SENFKL
Trigger: CAGTTTGAAATTTTCAGACAAAGATACAGAAGCCCC...TTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp CGTCAGAAGTGGGAAGTTGCAATGTGTGTCCCCAAAATCAAGGTCCCTACGAAGTTGAAGTACCCAACCTaGACAAGAGTAAAGAAAACA +
Preference number: 5 (lower is better)
Translates to: RQKWEVAMCVPKIKVPTKLKYPT*TRVKKT
Trigger: TGTTTTCTTTACTCTTGTCAAGGTTGGGTACTTCAA...CTTCGTAGGGACCTTGATTTTGGGGACACACATTGCAACTTCCCACTTCTGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS CCA 90 bp CTCCAGCTTTGTGTTGGTAGAAAAGTCGCACTTCTGCCTCTGTCATaGTTCTCTCTTCATTTGTTAGAATTTCAAACCCAGCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: LQLCVGRKVALLPLS*FSLHLLEFQTQLPE
Trigger: TTCAGGAAGCTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCATGACAGAGGCAGAAGTGCGACTTTTCTACCAACACAAAGCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000474690.5
ENST00000478220.5
ENST00000484930.5
ENST00000492993.5
CDS-3UTR CAA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTAACAACAGTTAGTCCTTaGGAACTGAGCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVTTVSP*ELSISS
Trigger: GGAGGAAATGCTCAGTTCCAAAGGACTAACTGTTGT...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp TGTCTTCTAAGTGGAGTGTCTGAGCAGGACATCCATGCCAGGGGGAAAAGATATTGGTTCTCTCTTCATTaGTTAGAATTTCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: CLLSGVSEQDIHARGKRYWFSLH*LEFQTQ
Trigger: CTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCA...ATATCTTTTCCCCCTGGCATGGATGTCCTGCTCAGACACTCCACTTAGAAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp GGAGATGGACAGAGCCTTTATTGTATATATGCCCATTTAAAGATGGAAAGTGGGGTCAGAAGTGGGAAGTaGCAATGTGTGTCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: GDGQSLYCIYAHLKMESGVRSGK*QCVSPK
Trigger: TTTTGGGGACACACATTGCAACTTCCCACTTCTGAC...CCCACTTTCCATCTTTAAATGGGCATATATACAATAAAGGCTCTGTCCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATTCTTGGGTGCTGATGTaGACCTGTTTTACCAGCTAC +
Preference number: 5 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYSWVLM*TCFTSY
Trigger: GTAGCTGGTAAAACAGGTCAACATCAGCACCCAAGA...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS-3UTR CAA 90 bp CAAAAATTATCAATCCCCCACACACTCAAGCACATAGTTACAAATTCCTTGTATAAGACCAAGTCTGCCTaGATGACTTACCCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: QKLSIPHTLKHIVTNSLYKTKSA*MTYPEG
Trigger: CCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTT...ATACAAGGAATTTGTAACTATGTGCTTGAGTGTGTGGGGGATTGATAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CAA 90 bp CATATCAGTAAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATACAACAGTTAGTCCTTaGGAACTGAGCATTTCCTCC +
Preference number: 5 (lower is better)
Translates to: HISKNGIRFGLGRGVDQYTTVSP*ELSISS
Trigger: GGAGGAAATGCTCAGTTCCAAAGGACTAACTGTTGT...ATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTTACTGATATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS-3UTR CAA 90 bp GATTTAATAAAGACCAAGTCTGCCTTGATGACTTACCCTGAGGGGCTTCTGTATGGGGCTTCTGTATCTTaGTCTGAAAATTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: DLIKTKSALMTYPEGLLYGASVS*SENFKL
Trigger: CAGTTTGAAATTTTCAGACAAAGATACAGAAGCCCC...ATACAGAAGCCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTTTATTAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS-3UTR CAA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGAAAGAACAGTCATGTTaGGTGGTTTTTCTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWKEQSC*VVFLEQ
Trigger: TTGCTCTAGAAAAACCACCAAACATGACTGTTCTTT...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp TTTTCTAGAGCAACATCAGCAGTTGGTATCTGGAGGAGGAGTAATGAATGGTGGTTGAAGTACCCAACCTaGACAAGAGTAAAGAAAACA +
Preference number: 5 (lower is better)
Translates to: FSRATSAVGIWRRSNEWWLKYPT*TRVKKT
Trigger: TGTTTTCTTTACTCTTGTCAAGGTTGGGTACTTCAA...CCACCATTCATTACTCCTCCTCCAGATACCAACTGCTGATGTTGCTCTAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000317876.8
ENST00000383180.6
CDS-3UTR CAA 90 bp GTATTGGTACTCAAAAGAGTAAGTTCCGATTCCGGAGGTCTGTTTTGTGCAGTACATAAGGTAGATTTATaGTTGGGGAAACACCATCTC +
Preference number: 5 (lower is better)
Translates to: VLVLKRVSSDSGGLFCAVHKVDL*LGKHHL
Trigger: GAGATGGTGTTTCCCCAACAATAAATCTACCTTATG...TACTGCACAAAACAGACCTCCGGAATCGGAACTTACTCTTTTGAGTACCAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS-3UTR CAA 90 bp GATTTAATAAAGACCAAGTCTGCCTTGATGACTTACCCTGAGGGGCTTCTGTATTGGTTCTCTCTTCATTaGTTAGAATTTCAAACCCAG +
Preference number: 5 (lower is better)
Translates to: DLIKTKSALMTYPEGLLYWFSLH*LEFQTQ
Trigger: CTGGGTTTGAAATTCTAACAAATGAAGAGAGAACCA...ATACAGAAGCCCCTCAGGGTAAGTCATCAAGGCAGACTTGGTCTTTATTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474690.5
CDS CCA 90 bp CTCTCTGATGAAACCATGTCCTCATCTTCACCATTATTCTTTCCATaGGAAACACATTCATCTTCATCAGAAAGAGCCTCATCTTTAATC +
Preference number: 5 (lower is better)
Translates to: LSDETMSSSSPLFFP*ETHSSSSERASSLI
Trigger: GATTAAAGATGAGGCTCTTTCTGATGAAGATGAATGTGTTTCCCATGGAAAGAATAATGGTGAAGATGAGGACATGGTTTCATCAGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333911.9
ENST00000475751.5
CDS CCA 90 bp CTCTCTGATGAAACCATGTCCTCATCTTCACCATTATTCTTTCCATaGGAAACACATTCATCTTCATCAGAAAGAGCCTCATCTTTAATT +
Preference number: 5 (lower is better)
Translates to: LSDETMSSSSPLFFP*ETHSSSSERASSLI
Trigger: AATTAAAGATGAGGCTCTTTCTGATGAAGATGAATGTGTTTCCCATGGAAAGAATAATGGTGAAGATGAGGACATGGTTTCATCAGAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000474690.5
ENST00000478220.5
ENST00000484930.5
ENST00000492993.5
CDS-3UTR CAA 90 bp AAGAATGGAATTAGGTTTGGTCTAGGGCGAGGAGTAGATCAATATGTAAATGTTGGGGCTTCTGTATCTTaGTCTGAAAATTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: KNGIRFGLGRGVDQYVNVGASVS*SENFKL
Trigger: CAGTTTGAAATTTTCAGACAAAGATACAGAAGCCCC...AACATTTACATATTGATCTACTCCTCGCCCTAGACCAAACCTAATTCCATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000492993.5
CDS GCA 72 bp CGCGCGCAGAGGCCGGAGTCAGTGCGCCGGGCGCGGTaGAGCCTGTCGGGCACAGGGTCGCCAGTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: RAQRPESVRRAR*SLSGTGSPVEE
Trigger: TTCCTCGACTGGCGACCCTGTGCCCGACAGGCTGCACCGCGCCCGGCGCACTGACTCCGGCCTCTGCGCGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS CCA 72 bp CCCGCGAGGAAGCGGAGCCTGCAGTCCACGGGCTCGTaGCTCGCCGGGCGGTTTTCTGGGGATCTGCGAAGC +
Preference number: 6 (lower is better)
Translates to: PARKRSLQSTGS*LAGRFSGDLRS
Trigger: GCTTCGCAGATCCCCAGAAAACCGCCCGGCGAGCCACGAGCCCGTGGACTGCAGGCTCCGCTTCCTCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS GCA 72 bp CGTGGGCCGTTCCCCCGCAGCCTCGCGACAAACCGCTaGGTGGATCAGCAAGCCCAGAGCCTCCTTCAGACA +
Preference number: 6 (lower is better)
Translates to: RGPFPRSLATNR*VDQQAQSLLQT
Trigger: TGTCTGAAGGAGGCTCTGGGCTTGCTGATCCACGCAGCGGTTTGTCGCGAGGCTGCGGGGGAACGGCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS CCA 72 bp CTCTGCAAAGAAGACGAAGCCCTGTTACCGCGGCCGTaGGCCGTTCCCCCGCAGCCTCGCGACAAACCGCTG +
Preference number: 6 (lower is better)
Translates to: LCKEDEALLPRP*AVPPQPRDKPL
Trigger: CAGCGGTTTGTCGCGAGGCTGCGGGGGAACGGCCCACGGCCGCGGTAACAGGGCTTCGTCTTCTTTGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS CAA 72 bp GCTCGGAGACTTTCTGGCTGCTCCCTCCTGGCCACATaGGGGTCACGGGGGCCCATGACGGTTCGCCAGGTA +
Preference number: 6 (lower is better)
Translates to: ARRLSGCSLLAT*GSRGPMTVRQV
Trigger: TACCTGGCGAACCGTCATGGGCCCCCGTGACCCCAATGTGGCCAGGAGGGAGCAGCCAGAAAGTCTCCGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS CAA 72 bp CCTCAGGAAAGCAAAGCGCCTCAGTGGGCCCCGCTGTaGCTTCAGCCTCACCGCCCTGAGGGGCTTCTGTAT +
Preference number: 6 (lower is better)
Translates to: PQESKAPQWAPL*LQPHRPEGLLY
Trigger: ATACAGAAGCCCCTCAGGGCGGTGAGGCTGAAGCAACAGCGGGGCCCACTGAGGCGCTTTGCTTTCCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS TCA 72 bp CCATGGACGGCATTGAAGGGCATTTCTGTGCCGTACTaGGCTCGGAGACTTTCTGGCTGCTCCCTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: PWTALKGISVPY*ARRLSGCSLLA
Trigger: GGCCAGGAGGGAGCAGCCAGAAAGTCTCCGAGCTCAGTACGGCACAGAAATGCCCTTCAATGCCGTCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS TCA 72 bp CAGCATCTTCTCTGTCCCGGCTTCCATGGACGGCATTaGAGGGCATTTCTGTGCCGTACTGAGCTCGGAGAC +
Preference number: 6 (lower is better)
Translates to: QHLLCPGFHGRH*RAFLCRTELGD
Trigger: GTCTCCGAGCTCAGTACGGCACAGAAATGCCCTTCAATGCCGTCCATGGAAGCCGGGACAGAGAAGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000474690.5
ENST00000484930.5
ENST00000492993.5
CDS GCA 72 bp CGGAGGTCTGTTTTGTGCAGTAGACCCCTGGTCACGTaGTCTGGAAGAGCAGCACAGCCATCTCAATCCACA +
Preference number: 6 (lower is better)
Translates to: RRSVLCSRPLVT*SGRAAQPSQST
Trigger: TGTGGATTGAGATGGCTGTGCTGCTCTTCCAGAGCACGTGACCAGGGGTCTACTGCACAAAACAGACCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS TCA 72 bp GTGAGGATCAGGAGGTGGCTTGGTCCACTGCACATGTaGTGTACCAGCTTCTCAAATGCCTCCTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: VRIRRWLGPLHM*CTSFSNASSPA
Trigger: AGCTGGAGAGGAGGCATTTGAGAAGCTGGTACATCACATGTGCAGTGGACCAAGCCACCTCCTGATCCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS CAA 90 bp GACCTGTTTTACCAGCTACTCGGGAGGCTGAGACATGAGAACTGCTaGAACGTGAGAGGTGGAGGTTGCACTGAGATGAGATCATGCCGC +
Preference number: 6 (lower is better)
Translates to: DLFYQLLGRLRHENC*NVRGGGCTEMRSCR
Trigger: GCGGCATGATCTCATCTCAGTGCAACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCTCAGCCTCCCGAGTAGCTGGTAAAACAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS TCA 72 bp TTTAAGGTGCTTCTAACTGGCGGCAAATCAGCACACTaGTACAAAGTGAACACCCCGCGAGGAAGCGGAGCC +
Preference number: 6 (lower is better)
Translates to: FKVLLTGGKSAH*YKVNTPRGSGA
Trigger: GGCTCCGCTTCCTCGCGGGGTGTTCACTTTGTATCAGTGTGCTGATTTGCCGCCAGTTAGAAGCACCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS TCA 72 bp CCATGGACGGCATTGAAGGGCATTTCTGTGCCGTACTaGGCTCGGAGACTCTCCAGCTTTGTGTTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PWTALKGISVPY*ARRLSSFVLVE
Trigger: TTCTACCAACACAAAGCTGGAGAGTCTCCGAGCTCAGTACGGCACAGAAATGCCCTTCAATGCCGTCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474690.5
ENST00000492993.5
CDS GCA 72 bp AGACATGAGAACTGCTTGAACGTGAGAGGTGGAGGTTaGACTGAGATGAGATCATGCCGCTGCATTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RHENCLNVRGGG*TEMRSCRCIPA
Trigger: GGCTGGAATGCAGCGGCATGATCTCATCTCAGTGCAACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS CAA 72 bp TACCAGCTACTCGGGAGGCTGAGACATGAGAACTGCTaGAACGTGAGAGGTGGAGGTTGCACTGAGATGAGA +
Preference number: 6 (lower is better)
Translates to: YQLLGRLRHENC*NVRGGGCTEMR
Trigger: TCTCATCTCAGTGCAACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCTCAGCCTCCCGAGTAGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS GCA 72 bp TTTTACCAGCTACTCGGGAGGCTGAGACATGAGAACTaGTTGAACGTGAGAGGTGGAGGTTGCACTGAGATG +
Preference number: 6 (lower is better)
Translates to: FYQLLGRLRHEN*LNVRGGGCTEM
Trigger: CATCTCAGTGCAACCTCCACCTCTCACGTTCAAGCAGTTCTCATGTCTCAGCCTCCCGAGTAGCTGGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383180.6
CDS CCA 72 bp TGGGACCCTGTTATCCCTGCTGTTCTTATGGATTACTaGGAAAGTGAGCCACTGCGAACGACAGGTACAAGA +
Preference number: 6 (lower is better)
Translates to: WDPVIPAVLMDY*ESEPLRTTGTR
Trigger: TCTTGTACCTGTCGTTCGCAGTGGCTCACTTTCCCAGTAATCCATAAGAACAGCAGGGATAACAGGGTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS CCA 72 bp AGCCACCAGTTCTCCTCCTGCATAAAACAGAAAGGTTaGCTCGCACTTCCCTCTGTACTTTTCGAGGACATC +
Preference number: 6 (lower is better)
Translates to: SHQFSSCIKQKG*LALPSVLFEDI
Trigger: GATGTCCTCGAAAAGTACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTATGCAGGAGGAGAACTGGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333911.9
ENST00000475751.5
CDS CAA 72 bp CAGCCACCAGTTCTCCTCCTGCATAAAACAGAAAGGTaGGCTCGCACTTCCCTCTGTACTTTTCGAGGACAT +
Preference number: 6 (lower is better)
Translates to: QPPVLLLHKTER*ARTSLCTFRGH
Trigger: ATGTCCTCGAAAAGTACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTATGCAGGAGGAGAACTGGTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333911.9
ENST00000475751.5
CDS CAA 72 bp TCAAGTCCCAGTGATGCCTGGCTCTCCTTCCATCCTTaGAGTTCCAAGAGATCCCTGTATTCCTTCCAATGC +
Preference number: 6 (lower is better)
Translates to: SSPSDAWLSFHP*SSKRSLYSFQC
Trigger: GCATTGGAAGGAATACAGGGATCTCTTGGAACTCAAAGGATGGAAGGAGAGCCAGGCATCACTGGGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS CAA 72 bp TACCAGCTTCTCAAATGCCTCCTCTCCAGCTTTGTGTaGGTAGAAAAGTCGCACTTCTGCCTCTGTCATGGT +
Preference number: 6 (lower is better)
Translates to: YQLLKCLLSSFV*VEKSHFCLCHG
Trigger: ACCATGACAGAGGCAGAAGTGCGACTTTTCTACCAACACAAAGCTGGAGAGGAGGCATTTGAGAAGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000484930.5
CDS CAA 90 bp CCTGTATTCCTTCCAATGCATTCTCCTTTAGTGCCAGTTAGTCCTTaGGAACTGAGCATTTCCTCCCAAAGCTCTTGGGTGCTGATGTTG +
Preference number: 6 (lower is better)
Translates to: PVFLPMHSPLVPVSP*ELSISSQSSWVLML
Trigger: CAACATCAGCACCCAAGAGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAACTGGCACTAAAGGAGAATGCATTGGAAGGAATACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS TCA 72 bp TGTTATCCCTGCTGTTCTTATGGATTACTGGGAAAGTaGGCCACTGCGAACGACAGGTACAAGATCTTCGAC +
Preference number: 6 (lower is better)
Translates to: CYPCCSYGLLGK*ATANDRYKIFD
Trigger: GTCGAAGATCTTGTACCTGTCGTTCGCAGTGGCTCACTTTCCCAGTAATCCATAAGAACAGCAGGGATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333911.9
CDS CAA 72 bp CTTCCAATGCATTCTCCTTTAGTGCCAGTTAGTCCTTaGGAACTGAGCATTTCCTCCCAAAGCTCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: LPMHSPLVPVSP*ELSISSQSSWV
Trigger: CACCCAAGAGCTTTGGGAGGAAATGCTCAGTTCCAAAGGACTAACTGGCACTAAAGGAGAATGCATTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS GCA 72 bp CTTCATGATAATCTCATCAGTCTTTCCATGGGCCACTaGATCTGGTTTAATGATGGCCAAGGTACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: LHDNLISLSMGH*IWFNDGQGTGP
Trigger: AGGACCTGTACCTTGGCCATCATTAAACCAGATGCAGTGGCCCATGGAAAGACTGATGAGATTATCATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317876.8
ENST00000333911.9
ENST00000383180.6
ENST00000474690.5
ENST00000475751.5
ENST00000478220.5
ENST00000484930.5
ENST00000492993.5
CDS TCA 72 bp AAGTTTCTGGGTAAATTGCTAAGTGCAACAAATAACTaGTGCCAGGAGGATAGGGATGAGGAGGCCCATAGA +
Preference number: 6 (lower is better)
Translates to: KFLGKLLSATNN*CQEDRDEEAHR
Trigger: TCTATGGGCCTCCTCATCCCTATCCTCCTGGCATCAGTTATTTGTTGCACTTAGCAATTTACCCAGAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488716.1
CDS CCA 72 bp AAGAGCCTCATCTTTAATTGCATAAAACAGAAAGGTTaGCTCGCACTTCCCTCTGTACTTTTCGAGGACATC +
Preference number: 6 (lower is better)
Translates to: KSLIFNCIKQKG*LALPSVLFEDI
Trigger: GATGTCCTCGAAAAGTACAGAGGGAAGTGCGAGCCAACCTTTCTGTTTTATGCAATTAAAGATGAGGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000317876.8
ENST00000383180.6
ENST00000474690.5
ENST00000478220.5
ENST00000492993.5