Pregenerated sensors for NME8 (Homo sapiens)
Ensembl gene IDs: ENSG00000086288Ensembl transcript IDs: ENST00000199447.9, ENST00000426106.1, ENST00000440017.5, ENST00000444718.5, ENST00000455500.5, ENST00000476435.1
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCCCTTTCAGCGGTTTCTAATGAATCGCTGCCATACAACTGGTTaGCCGGCAAACTGTCCATCGCAAACTGTGCACATAAACTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: FPFQRFLMNRCHTTG*PANCPSQTVHINSL Trigger: CAGAGAGTTTATGTGCACAGTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGAAAGGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CCA 90 bp | TGTATTTCCCTTTCAGCGGTTTCTAATGAATCGCTGCCATACAACTaGTTGACCGGCAAACTGTCCATCGCAAACTGTGCACATAAACTC | + |
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Preference number: 1 (lower is better) Translates to: CISLSAVSNESLPYN*LTGKLSIANCAHKL Trigger: GAGTTTATGTGCACAGTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGAAAGGGAAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR GCA 90 bp | ATGGCTTCTTCAACAGTTCTTGGTCCCAGTAATTGTTTCCAGTATTaGAAGCCATTGTCTCTCAATAAAACAAGGGCTAGAGATGGACCA | + |
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Preference number: 1 (lower is better) Translates to: MASSTVLGPSNCFQY*KPLSLNKTRARDGP Trigger: TGGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAACTGTTGAAGAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CAA 90 bp | ATTTCCCTTTCAGCGGTTTCTAATGAATCGCTGCCATACAACTGGTaGACCGGCAAACTGTCCATCGCAAACTGTGCACATAAACTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ISLSAVSNESLPYNW*TGKLSIANCAHKLS Trigger: AGAGAGTTTATGTGCACAGTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGAAAGGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CAA 90 bp | TCAACAGTTCTTGGTCCCAGTAATTGTTTCCAGTATTGCAAGCCATaGTCTCTCAATAAAACAAGGGCTAGAGATGGACCACTGGTCATG | + |
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Preference number: 2 (lower is better) Translates to: STVLGPSNCFQYCKP*SLNKTRARDGPLVM Trigger: CATGACCAGTGGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAACTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CAA 90 bp | CACATAAACTCTCTGGAAAATATTCAATGGCTTCTTCAACAGTTCTaGGTCCCAGTAATTGTTTCCAGTATTGCAAGCCATTGTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: HINSLENIQWLLQQF*VPVIVSSIASHCLS Trigger: TGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAACTGTTGAAGAAGCCATTGAATATTTTCCAGAGAGTTTATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR-3UTR GCA 90 bp | CTCAATAAAACAAGGGCTAGAGATGGACCACTGGTCATGTTTTCTATAAGTTTACATTTTCATATTCCTTaGACAGTGCTTGTGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: LNKTRARDGPLVMFSISLHFHIP*TVLVLL Trigger: AAGAAGCACAAGCACTGTGCAAGGAATATGAAAATG...TAAACTTATAGAAAACATGACCAGTGGTCCATCTCTAGCCCTTGTTTTATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR TCA 72 bp | CAGCGGTTTCTAATGAATCGCTGCCATACAACTGGTTaGCCGGCAAACTGTCCATCGCAAACTGTGCACATA | + |
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Preference number: 3 (lower is better) Translates to: QRFLMNRCHTTG*PANCPSQTVHI Trigger: TATGTGCACAGTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CCA 72 bp | CTTTCAGCGGTTTCTAATGAATCGCTGCCATACAACTaGTTGACCGGCAAACTGTCCATCGCAAACTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LSAVSNESLPYN*LTGKLSIANCA Trigger: TGCACAGTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR GCA 72 bp | TCAACAGTTCTTGGTCCCAGTAATTGTTTCCAGTATTaGAAGCCATTGTCTCTCAATAAAACAAGGGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: STVLGPSNCFQY*KPLSLNKTRAR Trigger: TCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAACTGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR CCA 90 bp | TCAGCGGTTTCTAATGAATCGCTGCCATACAACTGGTTGACCGGCAAACTGTCCTCGCTGCCATACAACTaGTTGACCGGCAAACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SAVSNESLPYNWLTGKLSSLPYN*LTGKLS Trigger: GGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGA...GGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CAA 72 bp | TCAGCGGTTTCTAATGAATCGCTGCCATACAACTGGTaGACCGGCAAACTGTCCATCGCAAACTGTGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SAVSNESLPYNW*TGKLSIANCAH Trigger: ATGTGCACAGTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGAAACCGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR TCA 90 bp | TTCTTGGTCCCAGTAATTGTTTCCAGTATTGCAAGCCATTGTCTCTCAATAAAATGCCATACAACTGGTTaGCCGGCAAACTGTCCATCG | + |
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Preference number: 4 (lower is better) Translates to: FLVPVIVSSIASHCLSIKCHTTG*PANCPS Trigger: CGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCA...TTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CAA 72 bp | CTTGGTCCCAGTAATTGTTTCCAGTATTGCAAGCCATaGTCTCTCAATAAAACAAGGGCTAGAGATGGACCA | + |
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Preference number: 4 (lower is better) Translates to: LGPSNCFQYCKP*SLNKTRARDGP Trigger: TGGTCCATCTCTAGCCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR GCA 90 bp | GTCCCAGTAATTGTTTCCAGTATTGCAAGCCATTGTCTCTCAATAAAACAAGGGCATTTTCATATTCCTTaGACAGTGCTTGTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VPVIVSSIASHCLSIKQGHFHIP*TVLVLL Trigger: AAGAAGCACAAGCACTGTGCAAGGAATATGAAAATG...CCCTTGTTTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR GCA 90 bp | AAGAAATGCTGTATTTCCCTTTCAGCGGTTTCTAATGAATCGCTGCCATACAACTTATCTCTAAATGGCTaGAAAGTCACAATGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: KKCCISLSAVSNESLPYNLSLNG*KVTMLS Trigger: TGACAACATTGTGACTTTGCAGCCATTTAGAGATAA...GTTGTATGGCAGCGATTCATTAGAAACCGCTGAAAGGGAAATACAGCATTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR GCA 90 bp | GTTCTTGGTCCCAGTAATTGTTTCCAGTATTGCAAGCCATTGTCTCTCAATAAAAATTGTTTCCAGTATTaGAAGCCATTGTCTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: VLGPSNCFQYCKPLSLNKNCFQY*KPLSLN Trigger: ATTGAGAGACAATGGCTTGCAATACTGGAAACAATT...TTTATTGAGAGACAATGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| 3UTR CAA 72 bp | TTCTTATTATTCCTCCCAGGAAGCTGTGCCAAATGGTaGTATATTGACGTGAACATATGTATTATCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: FLLFLPGSCAKW*YIDVNICIIFS Trigger: TGAGAAGATAATACATATGTTCACGTCAATATACAACCATTTGGCACAGCTTCCTGGGAGGAATAATAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS TCA 90 bp | CCCAGAGGATCTAAATCGGCTCCCTCGTTGTGGCCGTTTGAGCGGTaGCCTCGGCGAAGTTCCATTCCAGTACCTAGGACCCTGGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: PRGSKSAPSLWPFER*PRRSSIPVPRTLVG Trigger: CCCTACCAGGGTCCTAGGTACTGGAATGGAACTTCGCCGAGGTCACCGCTCAAACGGCCACAACGAGGGAGCCGATTTAGATCCTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS GCA 90 bp | CAGTGGGGACAAGACCAGGTGGCGCCTAAAATCCTCCACCTCTTCTaGCCACACAATGAAGGAACAACGAAGTCCTGGTTCCACCATCAC | + |
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Preference number: 5 (lower is better) Translates to: QWGQDQVAPKILHLF*PHNEGTTKSWFHHH Trigger: GTGATGGTGGAACCAGGACTTCGTTGTTCCTTCATTGTGTGGGCAGAAGAGGTGGAGGATTTTAGGCGCCACCTGGTCTTGTCCCCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000455500.5 |
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| CDS CCA 90 bp | ATCCTCCACCTCTTCTGCCCACACAATGAAGGAACAACGAAGTCCTaGTTCCACCATCACAAGACTCTGTTCTTCAGCTGCCTCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: ILHLFCPHNEGTTKS*FHHHKTLFFSCLIP Trigger: GGGGATGAGGCAGCTGAAGAACAGAGTCTTGTGATGGTGGAACCAGGACTTCGTTGTTCCTTCATTGTGTGGGCAGAAGAGGTGGAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS TCA 90 bp | TTGTTCTTCATCATTCCAGGTGTAACCTGGGCTTCGACCTCAGGTTaGTCCTCAGATCGTTCGTTAGGTTCGGTGTCAGTCTGTGGTTCG | + |
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Preference number: 5 (lower is better) Translates to: LFFIIPGVTWASTSG*SSDRSLGSVSVCGS Trigger: CGAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCCCAGGTTACACCTGGAATGATGAAGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS GCA 90 bp | TTTTGCTTCTTCTGGGTCTGTTGGGCCCATCAATCGTCTCCATTCTaGAACAGCATTCCACTTGGTCAGAATCATGACCATAGATGGACC | + |
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Preference number: 5 (lower is better) Translates to: FCFFWVCWAHQSSPF*NSIPLGQNHDHRWT Trigger: GGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGACCCAGAAGAAGCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000476435.1 |
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| CDS-3UTR CAA 90 bp | TCTAATGAATCGCTGCCATACAACTGGTTGACCGGCAAACTGTCCATCGCAAACCTTCTTCAACAGTTCTaGGTCCCAGTAATTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SNESLPYNWLTGKLSIANLLQQF*VPVIVS Trigger: GGAAACAATTACTGGGACCAAGAACTGTTGAAGAAG...GTTTGCGATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAGCGATTCATTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR CAA 90 bp | CTCAATAAAACAAGGGCTAGAGATGGACCACTGGTCATGTTTTCTATAAGTTTACTGCCATACAACTGGTaGACCGGCAAACTGTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LNKTRARDGPLVMFSISLLPYNW*TGKLSI Trigger: GATGGACAGTTTGCCGGTCAACCAGTTGTATGGCAG...TAAACTTATAGAAAACATGACCAGTGGTCCATCTCTAGCCCTTGTTTTATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS-3UTR CAA 90 bp | ATGGCTTCTTCAACAGTTCTTGGTCCCAGTAATTGTTTCCAGTATTGCAAGCCACAGTATTGCAAGCCATaGTCTCTCAATAAAACAAGG | + |
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Preference number: 5 (lower is better) Translates to: MASSTVLGPSNCFQYCKPQYCKP*SLNKTR Trigger: CCTTGTTTTATTGAGAGACAATGGCTTGCAATACTG...TGGCTTGCAATACTGGAAACAATTACTGGGACCAAGAACTGTTGAAGAAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426106.1 |
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| CDS TCA 90 bp | ATGAACTTAGCAACATTAGCTGCATCCTCTTCAATGTCACAGAGCTaGGCTAAATGTTGTCTTTCCAGATATTCTTGTAAACTGTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: MNLATLAASSSMSQS*AKCCLSRYSCKLSC Trigger: ACAAGACAGTTTACAAGAATATCTGGAAAGACAACATTTAGCTCAGCTCTGTGACATTGAAGAGGATGCAGCTAATGTTGCTAAGTTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 90 bp | GGAACAGGCCCAGAGGATCTAAATCGGCTCCCTCGTTGTGGCCGTTaGAGCGGTGACCTCGGCGAAGTTCCATTCCAGTACCTAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: GTGPEDLNRLPRCGR*SGDLGEVPFQYLGP Trigger: GGGTCCTAGGTACTGGAATGGAACTTCGCCGAGGTCACCGCTCAAACGGCCACAACGAGGGAGCCGATTTAGATCCTCTGGGCCTGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS TCA 72 bp | TCTAAATCGGCTCCCTCGTTGTGGCCGTTTGAGCGGTaGCCTCGGCGAAGTTCCATTCCAGTACCTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SKSAPSLWPFER*PRRSSIPVPRT Trigger: GGTCCTAGGTACTGGAATGGAACTTCGCCGAGGTCACCGCTCAAACGGCCACAACGAGGGAGCCGATTTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS CAA 72 bp | CCAGAGGATCTAAATCGGCTCCCTCGTTGTGGCCGTTaGAGCGGTGACCTCGGCGAAGTTCCATTCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: PEDLNRLPRCGR*SGDLGEVPFQY Trigger: GTACTGGAATGGAACTTCGCCGAGGTCACCGCTCAAACGGCCACAACGAGGGAGCCGATTTAGATCCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS GCA 72 bp | CAAGACCAGGTGGCGCCTAAAATCCTCCACCTCTTCTaGCCACACAATGAAGGAACAACGAAGTCCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QDQVAPKILHLF*PHNEGTTKSWF Trigger: GAACCAGGACTTCGTTGTTCCTTCATTGTGTGGGCAGAAGAGGTGGAGGATTTTAGGCGCCACCTGGTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000455500.5 |
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| CDS TCA 72 bp | ATCATTCCAGGTGTAACCTGGGCTTCGACCTCAGGTTaGTCCTCAGATCGTTCGTTAGGTTCGGTGTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: IIPGVTWASTSG*SSDRSLGSVSV Trigger: GACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCCCAGGTTACACCTGGAATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 72 bp | CATCATTCCAGGTGTAACCTGGGCTTCGACCTCAGGTaGATCCTCAGATCGTTCGTTAGGTTCGGTGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: HHSRCNLGFDLR*ILRSFVRFGVS Trigger: ACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCCCAGGTTACACCTGGAATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 90 bp | CTCGGATGGAGTCAGGGGAAAGTAATTTTGCTTCTTCTGGGTCTGTaGGGCCCATCAATCGTCTCCATTCTGCAACAGCATTCCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: LGWSQGKVILLLLGL*GPSIVSILQQHSTW Trigger: CCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGACCCAGAAGAAGCAAAATTACTTTCCCCTGACTCCATCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000476435.1 |
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| CDS CAA 90 bp | TCTGTTGGGCCCATCAATCGTCTCCATTCTGCAACAGCATTCCACTaGGTCAGAATCATGACCATAGATGGACCCCTGCAAAGAACGGTG | + |
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Preference number: 6 (lower is better) Translates to: SVGPINRLHSATAFH*VRIMTIDGPLQRTV Trigger: CACCGTTCTTTGCAGGGGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476435.1 |
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| CDS CCA 72 bp | CTCTTCTGCCCACACAATGAAGGAACAACGAAGTCCTaGTTCCACCATCACAAGACTCTGTTCTTCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFCPHNEGTTKS*FHHHKTLFFSC Trigger: GCAGCTGAAGAACAGAGTCTTGTGATGGTGGAACCAGGACTTCGTTGTTCCTTCATTGTGTGGGCAGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000455500.5 |
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| CDS CAA 90 bp | TTTGTTCTTCATCATTCCAGGTGTAACCTGGGCTTCGACCTCAGGTaGATCCTCAGATCGTTCGTTAGGTTCGGTGTCAGTCTGTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FVLHHSRCNLGFDLR*ILRSFVRFGVSLWF Trigger: GAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGATCAACCTGAGGTCGAAGCCCAGGTTACACCTGGAATGATGAAGAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS GCA 72 bp | TTCTGGGTCTGTTGGGCCCATCAATCGTCTCCATTCTaGAACAGCATTCCACTTGGTCAGAATCATGACCAT | + |
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Preference number: 6 (lower is better) Translates to: FWVCWAHQSSPF*NSIPLGQNHDH Trigger: ATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGACCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000476435.1 |
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| CDS CCA 72 bp | AACAGCATTCCACTTGGTCAGAATCATGACCATAGATaGACCCCTGCAAAGAACGGTGCTTTCAGAAGACCC | + |
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Preference number: 6 (lower is better) Translates to: NSIPLGQNHDHR*TPAKNGAFRRP Trigger: GGGTCTTCTGAAAGCACCGTTCTTTGCAGGGGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476435.1 |
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| CDS CAA 72 bp | CCCATCAATCGTCTCCATTCTGCAACAGCATTCCACTaGGTCAGAATCATGACCATAGATGGACCCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: PINRLHSATAFH*VRIMTIDGPLQ Trigger: TTGCAGGGGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476435.1 |
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| CDS CAA 90 bp | TACTTATTCCAAACTGGGCTCGGATGGAGTCAGGGGAAAGTAATTTaGCTTCTTCTGGGTCTGTTGGGCCCATCAATCGTCTCCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: YLFQTGLGWSQGKVI*LLLGLLGPSIVSIL Trigger: CAGAATGGAGACGATTGATGGGCCCAACAGACCCAGAAGAAGCAAAATTACTTTCCCCTGACTCCATCCGAGCCCAGTTTGGAATAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000476435.1 |
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| CDS CAA 90 bp | TCTGTTGGGCCCATCAATCGTCTCCATTCTGCAACAGCATTCCACTaGGTCAGAATCATGACCATAGATGGACCCACAGATAACATTTCC | + |
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Preference number: 6 (lower is better) Translates to: SVGPINRLHSATAFH*VRIMTIDGPTDNIS Trigger: GGAAATGTTATCTGTGGGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CCA 72 bp | ATCCTCAGATCGTTCGTTAGGTTCGGTGTCAGTCTGTaGTTCGGTTTCTTCAGAGGGAGGATTGTGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: ILRSFVRFGVSL*FGFFRGRIVFT Trigger: AGTAAACACAATCCTCCCTCTGAAGAAACCGAACCACAGACTGACACCGAACCTAACGAACGATCTGAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 72 bp | CCCATCAATCGTCTCCATTCTGCAACAGCATTCCACTaGGTCAGAATCATGACCATAGATGGACCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: PINRLHSATAFH*VRIMTIDGPTD Trigger: ATCTGTGGGTCCATCTATGGTCATGATTCTGACCAAGTGGAATGCTGTTGCAGAATGGAGACGATTGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 72 bp | AGTCAGGGGAAAGTAATTTTGCTTCTTCTGGGTCTGTaGGGCCCATCAATCGTCTCCATTCTGCAACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SQGKVILLLLGL*GPSIVSILQQH Trigger: ATGCTGTTGCAGAATGGAGACGATTGATGGGCCCAACAGACCCAGAAGAAGCAAAATTACTTTCCCCTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000476435.1 |
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| CDS TCA 72 bp | AAGCCTTTGTTCTGCAACATCTCATCCCACAGGCTTTaGTTATTGATGACTGTCTGTAACTGGACTTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: KPLFCNISSHRL*LLMTVCNWTSR Trigger: ACGAGAAGTCCAGTTACAGACAGTCATCAATAATCAAAGCCTGTGGGATGAGATGTTGCAGAACAAAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 72 bp | ACACTGGTCTGCTATTCGACTATAGAAGTTGACAACTaGTTCTTCAGTGAGCACTGTCTTATGCTCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLVCYSTIEVDN*FFSEHCLMLCF Trigger: GAAGCAGAGCATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTTCTATAGTCGAATAGCAGACCAGTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 72 bp | TTGTCAGCTTCTGCCTGTAACTGGACTTCTCGTTTTTaGCTTGCCATTTATCTAACAAAACAGGTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LSASACNWTSRF*LAIYLTKQVLL Trigger: GAGGAGGACCTGTTTTGTTAGATAAATGGCAAGCAAAAAACGAGAAGTCCAGTTACAGGCAGAAGCTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444718.5 |
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| CDS GCA 72 bp | CTCAGGATCCTCAAAGAGTCTATTAACAACCTCTTTTaGTTCATAGGCGTTAGATGCTCCATGGACAATGTT | + |
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Preference number: 6 (lower is better) Translates to: LRILKESINNLF*FIGVRCSMDNV Trigger: AACATTGTCCATGGAGCATCTAACGCCTATGAAGCAAAAGAGGTTGTTAATAGACTCTTTGAGGATCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000476435.1 |
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| CDS CAA 90 bp | TTCGAAGTCACACTGGTCTGCTATTCGACTATAGAAGTTGACAACTaGTTCTTCAGTGAGCACTGTCTTATGCTCTGCTTCTATAATAAA | + |
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Preference number: 6 (lower is better) Translates to: FEVTLVCYSTIEVDN*FFSEHCLMLCFYNK Trigger: TTTATTATAGAAGCAGAGCATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTTCTATAGTCGAATAGCAGACCAGTGTGACTTCGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS TCA 72 bp | GCAACATTAGCTGCATCCTCTTCAATGTCACAGAGCTaGGCTAAATGTTGTCTTTCCAGATATTCTTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: ATLAASSSMSQS*AKCCLSRYSCK Trigger: TTTACAAGAATATCTGGAAAGACAACATTTAGCTCAGCTCTGTGACATTGAAGAGGATGCAGCTAATGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000199447.9 ENST00000440017.5 |
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| CDS CAA 72 bp | TTATTGATGACTGTCTGTAACTGGACTTCTCGTTTTTaGCTTGCCATTTATCTAACAAAACAGGTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LLMTVCNWTSRF*LAIYLTKQVLL Trigger: GAGGAGGACCTGTTTTGTTAGATAAATGGCAAGCAAAAAACGAGAAGTCCAGTTACAGACAGTCATCAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199447.9 |
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| CDS GCA 72 bp | AAGTTGACAACTTGTTCTTCAGTGAGCACTGTCTTATaGTCTGCTTCTATAATAAATCCAGCTTTGGTAATT | + |
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Preference number: 6 (lower is better) Translates to: KLTTCSSVSTVL*SASIINPALVI Trigger: AATTACCAAAGCTGGATTTATTATAGAAGCAGAGCATAAGACAGTGCTCACTGAAGAACAAGTTGTCAACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000199447.9 ENST00000440017.5 ENST00000444718.5 |
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