RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NME7 (Homo sapiens)

Ensembl gene IDs: ENSG00000143156

Ensembl transcript IDs: ENST00000367811.8, ENST00000469474.5, ENST00000472647.5, ENST00000472984.1, ENST00000480478.5, ENST00000483228.5, ENST00000485609.5, ENST00000491225.5, ENST00000524967.5, ENST00000525440.5, ENST00000527460.1, ENST00000528517.5, ENST00000530739.5

Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATCTGTTCCAGGGCGTAAATaGCGGGCAATTTCGGAACAG +
Preference number: 2 (lower is better)
Translates to: PLIGHPLADQYSEQHSGSVPGRK*RAISEQ
Trigger: CTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAAC...AGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
3UTR-3UTR GCA 90 bp CCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATCTAGTTTTACCAAAGATTaGTCTGAGAGTTCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: PLIGHPLADQYSEQHSGSSFTKD*SESSRA
Trigger: CGCCCTGGAACTCTCAGAGCAATCTTTGGTAAAACT...AGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
3UTR-3UTR TCA 90 bp GTTGAATCTCCATTGCTACACAAGGGCCAGAATACATTTCTGTCACCATGTCATGAACATCTGCATAGCTaGGATTTCAAAACCTGCATC +
Preference number: 2 (lower is better)
Translates to: VESPLLHKGQNTFLSPCHEHLHS*DFKTCI
Trigger: GATGCAGGTTTTGAAATCTCAGCTATGCAGATGTTC...ATGACATGGTGACAGAAATGTATTCTGGCCCTTGTGTAGCAATGGAGATTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CCA 90 bp CCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATCTCTGTCGCACGAGGCGTaGGACGCCACCGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: PLIGHPLADQYSEQHSGSLSHEA*DATAPP
Trigger: AGGTGGGGCGGTGGCGTCCCACGCCTCGTGCGACAG...AGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CCA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTCTCCACGCTGTCGCCTaGGGCTACGAGACGCCATTA +
Preference number: 4 (lower is better)
Translates to: IALRVPGRKCRAISEQRCLHAVA*GYETPL
Trigger: TAATGGCGTCTCGTAGCCCCAGGCGACAGCGTGGAG...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCTGTCGCACGAGGCGTaGGACGCCACCGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFLSHEA*DATAPP
Trigger: AGGTGGGGCGGTGGCGTCCCACGCCTCGTGCGACAG...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAGCAGAGAAGAGAAGCATCTGTGCGTaGCACTCCAGAGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SDSHQDLSQQSIIGTAEKRSICA*HSRVCR
Trigger: CCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCT...CTTCTCTGCTGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR GCA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTGTTCCAGGGCGTAAATaGCGGGCAATTTCGGAACAG +
Preference number: 4 (lower is better)
Translates to: IALRVPGRKCRAISEQRCVPGRK*RAISEQ
Trigger: CTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAAC...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp GAACCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGAAGAAGCATCTGTGCGTaGCACTCCAGAGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: EPLIGHPLADQYSEQHSGRSICA*HSRVCR
Trigger: CCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCT...TCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCCTCCACGCTGTCGCCTaGGGCTACGAGACGCCATTA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTLHAVA*GYETPL
Trigger: TAATGGCGTCTCGTAGCCCCAGGCGACAGCGTGGAG...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAGCAGAGAAGTTTCAGAAGCATCTGTaGGTGCCACTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SDSHQDLSQQSIIGTAEKFQKHL*VPLQSL
Trigger: CAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAA...CTTCTCTGCTGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR GCA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTGCGCTGCATTTCTTATaGCATCTGTTCCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IALRVPGRKCRAISEQRCALHFL*HLFQRG
Trigger: CCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGC...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR TCA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTGAAAATAGGTATCGTTaGGACAGGAAGACACCACCA +
Preference number: 4 (lower is better)
Translates to: IALRVPGRKCRAISEQRCENRYR*DRKTPP
Trigger: TGGTGGTGTCTTCCTGTCTCAACGATACCTATTTTC...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp ACCTGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAAAAGAATCAGGGCCATaGGCTGCATTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: TCISDSHQDLSQQSIIGTKESGP*AAFLMP
Trigger: TGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTT...TGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTAAATGTCCCAACCTGTaGCTTCTTTACTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: IALRVPGRKCRAISEQRCKCPNL*LLYFPH
Trigger: GTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTT...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCAGAAGCATCTGTGCGTaGCACTCCAGAGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTRSICA*HSRVCR
Trigger: CCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTCTGTTGAATCTCCATTaGTACACAAGGGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: IALRVPGRKCRAISEQRCLLNLH*YTRARI
Trigger: TATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAG...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CCA 90 bp TGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAGCAACAACTCCATTTCTCTaGCCGCAGAAGCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: CISDSHQDLSQQSIIGTATTPFL*PQKQKN
Trigger: ATTCTTTTGCTTCTGCGGCCAGAGAAATGGAGTTGT...TGCTGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR GCA 90 bp GTGAACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGTGCCACTCCAGAGTTTaGAGGTCCCAGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VNSILDLSFTKDCSESSRCHSRV*RSQQSF
Trigger: AAAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCA...CCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCAGAAGCATCTGTGCGTaGCACTCCAGAGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFRSICA*HSRVCR
Trigger: CCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTCTTCTTTAGTTTGCCTAAAATCAGGGCCATGCGCTaGATTTCTTATGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: GVNAGQFRNRDVFFSLPKIRAMR*ISYAIC
Trigger: ACAGATGGCATAAGAAATGCAGCGCATGGCCCTGAT...TTTAGGCAAACTAAAGAAGACATCTCTGTTCCGAAATTGCCCGGCATTTACGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp ACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGGCGTAAATTTAGCAGTGTTTaGCGGCCCACAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: TAFWILVLPKIALRVPGRKFSSV*RPTTST
Trigger: AGTGGAGGTTGTGGGCCGGCAAACACTGCTAAATTT...ACGCCCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp GGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTCTTCTTTAGTTTGCCTAAAGGGAGTAATCTCAGCTaGGTTCATCCAATCGACAGA +
Preference number: 4 (lower is better)
Translates to: GVNAGQFRNRDVFFSLPKGSNLS*VHPIDR
Trigger: TCTGTCGATTGGATGAACGCAGCTGAGATTACTCCC...TTTAGGCAAACTAAAGAAGACATCTCTGTTCCGAAATTGCCCGGCATTTACGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CCA 90 bp ACCTGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAGCAGGTTATCATATTTaGTCCGCTTTAAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TCISDSHQDLSQQSIIGTAGYHI*SALKRC
Trigger: GCACCTTTTTAAAGCGGACCAAATATGATAACCTGC...TGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp TGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAGCAGTAGCATTATTCTGTTaGATCTCCATTGCTACACAA +
Preference number: 4 (lower is better)
Translates to: CISDSHQDLSQQSIIGTAVALFC*ISIATQ
Trigger: TTGTGTAGCAATGGAGATTCAACAGAATAATGCTAC...TGCTGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp GGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTCTTCTTTAGTTTGCCTAAATACCAAAGATTGCTCTaGGAGTTCCAGGGCGTAAAT +
Preference number: 4 (lower is better)
Translates to: GVNAGQFRNRDVFFSLPKYQRLL*EFQGVN
Trigger: ATTTACGCCCTGGAACTCTCAGAGCAATCTTTGGTA...TTTAGGCAAACTAAAGAAGACATCTCTGTTCCGAAATTGCCCGGCATTTACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTGCCACTCCAGAGTTTaGAGGTCCCAGCAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFCHSRV*RSQQSF
Trigger: AAAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTTTCAGAAGCATCTGTaGGTGCCACTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTFQKHL*VPLQSL
Trigger: CAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCATCAGGGCCATGCGCTaGATTTCTTATGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTIRAMR*ISYAIC
Trigger: ACAGATGGCATAAGAAATGCAGCGCATGGCCCTGAT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTTGAATCTCCATTGCTACACAAGGGCCAGAATACATTTCTGTCACCATGTCATATCAGGGCCATGCGCTaGATTTCTTATGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: VESPLLHKGQNTFLSPCHIRAMR*ISYAIC
Trigger: ACAGATGGCATAAGAAATGCAGCGCATGGCCCTGAT...ATGACATGGTGACAGAAATGTATTCTGGCCCTTGTGTAGCAATGGAGATTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCAAATTTAGCAGTGTTTaGCGGCCCACAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTKFSSV*RPTTST
Trigger: AGTGGAGGTTGTGGGCCGGCAAACACTGCTAAATTT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGTTCCAGGGCGTAAATaGCGGGCAATTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFVPGRK*RAISGS
Trigger: TGATCCTGAAATTGCCCGGCATTTACGCCCTGGAAC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367811.8
ENST00000472647.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGGGAGTAATCTCAGCTaGGTTCATCCAATCGACAGA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTGSNLS*VHPIDR
Trigger: TCTGTCGATTGGATGAACGCAGCTGAGATTACTCCC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CCA 90 bp GAACCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGAGCAGGTTATCATATTTaGTCCGCTTTAAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: EPLIGHPLADQYSEQHSGAGYHI*SALKRC
Trigger: GCACCTTTTTAAAGCGGACCAAATATGATAACCTGC...TCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGAAAATAGGTATCGTTaGGACAGGAAGACACCACCA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTENRYR*DRKTPP
Trigger: TGGTGGTGTCTTCCTGTCTCAACGATACCTATTTTC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCACTGGATCAGCTCATTaGAAAAGGGTCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTTGSAH*KRVLTG
Trigger: ACCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGGCAGATCAGTACAGTaGACAGCATTCTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTGRSVQ*TAFWIL
Trigger: TAAGATCCAGAATGCTGTTCACTGTACTGATCTGCC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTTTCAGAAGCATCTGTaGGTGCCACTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFFQKHL*VPLQSL
Trigger: CAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGCGCTGCATTTCTTATaGCATCTGTTCCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFALHFL*HLFQRG
Trigger: CCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGAACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGAAAGAATCAGGGCCATaGGCTGCATTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: VNSILDLSFTKDCSESSRKESGP*AAFLMP
Trigger: TGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTT...CCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCAAATTTAGCAGTGTTTaGCGGCCCACAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFKFSSV*RPTTST
Trigger: AGTGGAGGTTGTGGGCCGGCAAACACTGCTAAATTT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCAGTTTTACCAAAGATTaGTCTGAGAGTTCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTSFTKD*SESSRA
Trigger: CGCCCTGGAACTCTCAGAGCAATCTTTGGTAAAACT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GAGATTTCAAAACCTGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCACAATGCTTCTTTCCTTaGAAGCATCATCATTTTGAG +
Preference number: 4 (lower is better)
Translates to: EISKPASRIAIRIFPNSPQCFFP*KHHHFE
Trigger: CTCAAAATGATGATGCTTTCAAGGAAAGAAGCATTG...TGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCAGGTTTTGAAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCACTGGATCAGCTCATTaGAAAAGGGTCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFTGSAH*KRVLTG
Trigger: ACCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGAACATCTGCATAGCTaGGATTTCAAAACCTGCATC +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTEHLHS*DFKTCI
Trigger: GATGCAGGTTTTGAAATCTCAGCTATGCAGATGTTC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp ATCATAGGGACAGCAGAGAAGACCTATGGGAATGAAGATTTCCAGGAAAGAGTAGAACATCTGCATAGCTaGGATTTCAAAACCTGCATC +
Preference number: 4 (lower is better)
Translates to: IIGTAEKTYGNEDFQERVEHLHS*DFKTCI
Trigger: GATGCAGGTTTTGAAATCTCAGCTATGCAGATGTTC...TACTCTTTCCTGGAAATCTTCATTCCCATAGGTCTTCTCTGCTGTCCCTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTACCAAAGATTGCTCTaGGAGTTCCAGGGCGTAAAT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFYQRLL*EFQGVN
Trigger: ATTTACGCCCTGGAACTCTCAGAGCAATCTTTGGTA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGGCAGATCAGTACAGTaGACAGCATTCTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFGRSVQ*TAFWIL
Trigger: TAAGATCCAGAATGCTGTTCACTGTACTGATCTGCC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCAAATGTCCCAACCTGTaGCTTCTTTACTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTKCPNL*LLYFPH
Trigger: GTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCCGGACAATAAAAGAATaGACACATTCCTCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTRTIKE*THSSCV
Trigger: CACACACGAGGAATGTGTTCATTCTTTTATTGTCCG...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCAAAGAATCAGGGCCATaGGCTGCATTTCTTATGCCA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFKESGP*AAFLMP
Trigger: TGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCCTGTTGAATCTCCATTaGTACACAAGGGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTLLNLH*YTRARI
Trigger: TATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAG...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCACAACTCCATTTCTCTaGCCGCAGAAGCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTTTPFL*PQKQKN
Trigger: ATTCTTTTGCTTCTGCGGCCAGAGAAATGGAGTTGT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CCA 90 bp GTGAACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGACAACTCCATTTCTCTaGCCGCAGAAGCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: VNSILDLSFTKDCSESSRTTPFL*PQKQKN
Trigger: ATTCTTTTGCTTCTGCGGCCAGAGAAATGGAGTTGT...CCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR TCA 90 bp ACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGGCGTCATACCACTCTGCAATaGAAACGAATCTTTCACTAT +
Preference number: 4 (lower is better)
Translates to: TAFWILVLPKIALRVPGRHTTLQ*KRIFHY
Trigger: ATAGTGAAAGATTCGTTTTCATTGCAGAGTGGTATG...ACGCCCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCATAACGTCGAAGAAGTaGAGCATTTGGATCATACCA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTITSKK*SIWIIP
Trigger: TGGTATGATCCAAATGCTTCACTTCTTCGACGTTAT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TCTGTTGAATCTCCATTGCTACACAAGGGCCAGAATACATTTCTGTCACCATGTATAACGTCGAAGAAGTaGAGCATTTGGATCATACCA +
Preference number: 4 (lower is better)
Translates to: SVESPLLHKGQNTFLSPCITSKK*SIWIIP
Trigger: TGGTATGATCCAAATGCTTCACTTCTTCGACGTTAT...ACATGGTGACAGAAATGTATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp GGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTCTTCTTTAGTTTGCCTAAACAATGCTTCTTTCCTTaGAAGCATCATCATTTTGAG +
Preference number: 4 (lower is better)
Translates to: GVNAGQFRNRDVFFSLPKQCFFP*KHHHFE
Trigger: CTCAAAATGATGATGCTTTCAAGGAAAGAAGCATTG...TTTAGGCAAACTAAAGAAGACATCTCTGTTCCGAAATTGCCCGGCATTTACGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGAACATCTGCATAGCTaGGATTTCAAAACCTGCATC +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFEHLHS*DFKTCI
Trigger: GATGCAGGTTTTGAAATCTCAGCTATGCAGATGTTC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCAAATGTCCCAACCTGTaGCTTCTTTACTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFKCPNL*LLYFPH
Trigger: GTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCTGTTGAATCTCCATTaGTACACAAGGGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFLLNLH*YTRARI
Trigger: TATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAG...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGCAGGTTATCATATTTaGTCCGCTTTAAAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTAGYHI*SALKRC
Trigger: GCACCTTTTTAAAGCGGACCAAATATGATAACCTGC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCACAACTCCATTTCTCTaGCCGCAGAAGCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFTTPFL*PQKQKN
Trigger: ATTCTTTTGCTTCTGCGGCCAGAGAAATGGAGTTGT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCATAACGTCGAAGAAGTaGAGCATTTGGATCATACCA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFITSKK*SIWIIP
Trigger: TGGTATGATCCAAATGCTTCACTTCTTCGACGTTAT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCATTGAAAAAGGGTCTTaGCTGGTGATCTACATGAAA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTIEKGS*LVIYMK
Trigger: TTTCATGTAGATCACCAGTCAAGACCCTTTTTCAAT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGAACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGATTGAAAAAGGGTCTTaGCTGGTGATCTACATGAAA +
Preference number: 4 (lower is better)
Translates to: VNSILDLSFTKDCSESSRIEKGS*LVIYMK
Trigger: TTTCATGTAGATCACCAGTCAAGACCCTTTTTCAAT...CCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGTTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR TCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGTAGCATTATTCTGTTaGATCTCCATTGCTACACAA +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTVALFC*ISIATQ
Trigger: TTGTGTAGCAATGGAGATTCAACAGAATAATGCTAC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTGGATCATACCACTCTaGAATGAAAACGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTWIIPL*NENESF
Trigger: GAAAGATTCGTTTTCATTGCAGAGTGGTATGATCCA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367811.8
ENST00000525440.5
CDS-3UTR GCA 90 bp CTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAATTGCGCTGCATTTCTTATaGCATCTGTTCCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LSPCHDIRSLLLYKLHRIALHFL*HLFQRG
Trigger: CCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGC...AATTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR GCA 90 bp TTCTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAAAAATTTAGCAGTGTTTaGCGGCCCACAACCTCCACT +
Preference number: 4 (lower is better)
Translates to: FCHHVMIFGHYSFINFIEKFSSV*RPTTST
Trigger: AGTGGAGGTTGTGGGCCGGCAAACACTGCTAAATTT...TTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CCA 90 bp CTGTTGAATCTCCATTGCTACACAAGGGCCAGAATACATTTCTGTCACCATGTCCCAGTTGTAATAAACTaGATCAGCTCATTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLNLHCYTRARIHFCHHVPVVIN*ISSLKK
Trigger: CTTTTTCAATGAGCTGATCCAGTTTATTACAACTGG...GACATGGTGACAGAAATGTATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCATACCACTCTGCAATaGAAACGAATCTTTCACTAT +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFHTTLQ*KRIFHY
Trigger: ATAGTGAAAGATTCGTTTTCATTGCAGAGTGGTATG...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367811.8
ENST00000525440.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCAATGCTTCTTTCCTTaGAAGCATCATCATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFQCFFP*KHHHFE
Trigger: CTCAAAATGATGATGCTTTCAAGGAAAGAAGCATTG...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCATTGAAAAAGGGTCTTaGCTGGTGATCTACATGAAA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFIEKGS*LVIYMK
Trigger: TTTCATGTAGATCACCAGTCAAGACCCTTTTTCAAT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TTCTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAAACTGGATCAGCTCATTaGAAAAGGGTCTTGACTGGT +
Preference number: 4 (lower is better)
Translates to: FCHHVMIFGHYSFINFIETGSAH*KRVLTG
Trigger: ACCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGT...TTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGTAGCATTATTCTGTTaGATCTCCATTGCTACACAA +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFVALFC*ISIATQ
Trigger: TTGTGTAGCAATGGAGATTCAACAGAATAATGCTAC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR GCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTGGATCATACCACTCTaGAATGAAAACGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFWIIPL*NENESF
Trigger: GAAAGATTCGTTTTCATTGCAGAGTGGTATGATCCA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367811.8
ENST00000525440.5
CDS-3UTR GCA 90 bp CTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAATTCTGTTGAATCTCCATTaGTACACAAGGGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: LSPCHDIRSLLLYKLHRILLNLH*YTRARI
Trigger: TATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAG...AATTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CCA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCCAGTTGTAATAAACTaGATCAGCTCATTGAAAAAG +
Preference number: 4 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFPVVIN*ISSLKK
Trigger: CTTTTTCAATGAGCTGATCCAGTTTATTACAACTGG...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR TCA 90 bp TTCTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAACATACCACTCTGCAATaGAAACGAATCTTTCACTAT +
Preference number: 4 (lower is better)
Translates to: FCHHVMIFGHYSFINFIEHTTLQ*KRIFHY
Trigger: ATAGTGAAAGATTCGTTTTCATTGCAGAGTGGTATG...TTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR TCA 90 bp TTCTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAAATTGAAAAAGGGTCTTaGCTGGTGATCTACATGAAA +
Preference number: 4 (lower is better)
Translates to: FCHHVMIFGHYSFINFIEIEKGS*LVIYMK
Trigger: TTTCATGTAGATCACCAGTCAAGACCCTTTTTCAAT...TTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR GCA 90 bp CTGTCACCATGTCATGATATTCGGTCACTACTCCTTTATAAACTTCATAGAATTTGGATCATACCACTCTaGAATGAAAACGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: LSPCHDIRSLLLYKLHRIWIIPL*NENESF
Trigger: GAAAGATTCGTTTTCATTGCAGAGTGGTATGATCCA...AATTCTATGAAGTTTATAAAGGAGTAGTGACCGAATATCATGACATGGTGACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp TGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCATAGGGACAGCAGTGCCACTCCAGAGTTaGCAGGTCCCAGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: CISDSHQDLSQQSIIGTAVPLQS*QVPAVF
Trigger: AAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCAC...TGCTGTCCCTATGATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp CCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATCTGTGCCACTCCAGAGTTaGCAGGTCCCAGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: PLIGHPLADQYSEQHSGSVPLQS*QVPAVF
Trigger: AAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCAC...AGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS GCA 90 bp CCAACAGTCTCTGGCCGCAGAAGCAAAAGAATCAGGGCCATGCGCTaGATTTCTTATGCCATCTGTTCCAAAGAGGGCTCTAATGCTTTC +
Preference number: 5 (lower is better)
Translates to: PTVSGRRSKRIRAMR*ISYAICSKEGSNAF
Trigger: GAAAGCATTAGAGCCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTTTGCTTCTGCGGCCAGAGACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483228.5
CDS GCA 90 bp CTTTCCCAACAGTCTCTGGCCGCAGAAGCAAAAGAATCAGGGCCATaGGCTGCATTTCTTATGCCATCTGTTCCAAAGAGGGCTCTAATG +
Preference number: 5 (lower is better)
Translates to: LSQQSLAAEAKESGP*AAFLMPSVPKRALM
Trigger: CATTAGAGCCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTTTGCTTCTGCGGCCAGAGACTGTTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483228.5
CDS GCA 90 bp ATCTGTTCCAAAGAGGGCTCTAATGCTTTCAGAAGCATCTGTGCGTaGCACTCCAGAGTTTGCAGGTCCCAGCAGTCTTTTCCATTCACA +
Preference number: 5 (lower is better)
Translates to: ICSKEGSNAFRSICA*HSRVCRSQQSFPFT
Trigger: TGTGAATGGAAAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAAGCATTAGAGCCCTCTTTGGAACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000367811.8
ENST00000469474.5
ENST00000472647.5
ENST00000472984.1
ENST00000480478.5
ENST00000483228.5
ENST00000485609.5
ENST00000491225.5
ENST00000524967.5
ENST00000525440.5
ENST00000528517.5
CDS GCA 90 bp CTCCATTTCTCTGGCCGCAGAAGCAAAAGAATCAGGGCCATGCGCTaGATTTCTTATGCCATCTGTTCCAAAGAGGGCTCTAATGCTTTC +
Preference number: 5 (lower is better)
Translates to: LHFSGRRSKRIRAMR*ISYAICSKEGSNAF
Trigger: GAAAGCATTAGAGCCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTTTGCTTCTGCGGCCAGAGAAATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367811.8
ENST00000469474.5
ENST00000472647.5
ENST00000480478.5
ENST00000524967.5
ENST00000525440.5
ENST00000528517.5
CDS GCA 90 bp GGCTCTAATGCTTTCAGAAGCATCTGTGCGTGCCACTCCAGAGTTTaGAGGTCCCAGCAGTCTTTTCCATTCACATATAGCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: GSNAFRSICACHSRV*RSQQSFPFTYSIIS
Trigger: AGAGATGATGCTATATGTGAATGGAAAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAAGCATTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000367811.8
ENST00000469474.5
ENST00000472647.5
ENST00000472984.1
ENST00000480478.5
ENST00000483228.5
ENST00000485609.5
ENST00000491225.5
ENST00000524967.5
ENST00000525440.5
ENST00000528517.5
CDS GCA 90 bp AACAACTCCATTTCTCTGGCCGCAGAAGCAAAAGAATCAGGGCCATaGGCTGCATTTCTTATGCCATCTGTTCCAAAGAGGGCTCTAATG +
Preference number: 5 (lower is better)
Translates to: NNSISLAAEAKESGP*AAFLMPSVPKRALM
Trigger: CATTAGAGCCCTCTTTGGAACAGATGGCATAAGAAATGCAGCGCATGGCCCTGATTCTTTTGCTTCTGCGGCCAGAGAAATGGAGTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367811.8
ENST00000469474.5
ENST00000472647.5
ENST00000480478.5
ENST00000524967.5
ENST00000525440.5
ENST00000528517.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGTGCCACTCCAGAGTTaGCAGGTCCCAGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTVPLQS*QVPAVF
Trigger: AAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCAC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS TCA 90 bp ACCACTCATTGTCTCAGGATCTCAGCACTAGAAAATAGGTATCGTTaGGACAGGAAGACACCACCACCACCACCATCATACGGTTACTCA +
Preference number: 5 (lower is better)
Translates to: TTHCLRISALENRYR*DRKTPPPPPSYGYS
Trigger: TGAGTAACCGTATGATGGTGGTGGTGGTGGTGTCTTCCTGTCTCAACGATACCTATTTTCTAGTGCTGAGATCCTGAGACAATGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472647.5
CDS TCA 90 bp AGCGTTCATTGTCTCAGGATCTCAGCACTAGAAAATAGGTATCGTTaGGACAGGAAGACACCACCACCACCACCATCATACGGTTACTCA +
Preference number: 5 (lower is better)
Translates to: SVHCLRISALENRYR*DRKTPPPPPSYGYS
Trigger: TGAGTAACCGTATGATGGTGGTGGTGGTGGTGTCTTCCTGTCTCAACGATACCTATTTTCTAGTGCTGAGATCCTGAGACAATGAACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480478.5
CDS-3UTR CAA 90 bp CCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATCTAACTGGATCAGCTCATaGAAAAAGGGTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: PLIGHPLADQYSEQHSGSNWISS*KKGLDW
Trigger: CCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGTT...AGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CAA 90 bp GATTTCAAAACCTGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCTCTGTTGAATCTCCATaGCTACACAAGGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: DFKTCISDSHQDLSQQSISVESP*LHKGQN
Trigger: ATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAGA...GATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCAGGTTTTGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp CCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATCTTTTCACTATGATTCATaGTCTCAGGATCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: PLIGHPLADQYSEQHSGSFHYDS*SQDLST
Trigger: AGTGCTGAGATCCTGAGACAATGAATCATAGTGAAA...AGATCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CAA 90 bp GAACCTCTAATAGGCCATCCTCTGGCAGATCAGTACAGTGAACAGCATTCTGGATGCAGGTTATCATATTaGGTCCGCTTTAAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: EPLIGHPLADQYSEQHSGCRLSY*VRFKKV
Trigger: CACCTTTTTAAAGCGGACCAAATATGATAACCTGCA...TCCAGAATGCTGTTCACTGTACTGATCTGCCAGAGGATGGCCTATTAGAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CAA 90 bp ACAAGGGCCAGAATACATTTCTGTCACCATGTCATGATATTCGGTCACTACTCCAACTGGATCAGCTCATaGAAAAAGGGTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: TRARIHFCHHVMIFGHYSNWISS*KKGLDW
Trigger: CCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGTT...GGAGTAGTGACCGAATATCATGACATGGTGACAGAAATGTATTCTGGCCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp ATTGCTCTGAGAGTTCCAGGGCGTAAATGCCGGGCAATTTCGGAACAGAGATGTTGTAGCATTATTCTGTaGAATCTCCATTGCTACACA +
Preference number: 5 (lower is better)
Translates to: IALRVPGRKCRAISEQRCCSIIL*NLHCYT
Trigger: TGTGTAGCAATGGAGATTCAACAGAATAATGCTACA...ACATCTCTGTTCCGAAATTGCCCGGCATTTACGCCCTGGAACTCTCAGAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGGATCATACCACTCATaGTCTCAGGATCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTGSYHS*SQDLST
Trigger: AGTGCTGAGATCCTGAGACAATGAGTGGTATGATCC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472647.5
CDS TCA 90 bp ATAGCAAAGACATGGAATCAACCCAGGCGCCCATCAGTGGTGAATTaGAAAAGGGTCTTGACTGGTGATCTACATGAAAATCCAATGCTT +
Preference number: 5 (lower is better)
Translates to: IAKTWNQPRRPSVVN*KRVLTGDLHENPML
Trigger: AAGCATTGGATTTTCATGTAGATCACCAGTCAAGACCCTTTTTCAATTCACCACTGATGGGCGCCTGGGTTGATTCCATGTCTTTGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469474.5
CDS-3UTR CAA 90 bp ACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGGCGTGAAGAAGTGAAGCATTaGGATCATACCACTCTGCAA +
Preference number: 5 (lower is better)
Translates to: TAFWILVLPKIALRVPGREEVKH*DHTTLQ
Trigger: TTGCAGAGTGGTATGATCCAAATGCTTCACTTCTTC...ACGCCCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS-3UTR CAA 90 bp GATTTCAAAACCTGCATCTCGGATAGCCATCAGGATCTTTCCCAACAGTCCATCTGCAGGTTATCATATTaGGTCCGCTTTAAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: DFKTCISDSHQDLSQQSICRLSY*VRFKKV
Trigger: CACCTTTTTAAAGCGGACCAAATATGATAACCTGCA...GATGGACTGTTGGGAAAGATCCTGATGGCTATCCGAGATGCAGGTTTTGAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCAACTGGATCAGCTCATaGAAAAAGGGTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTNWISS*KKGLDW
Trigger: CCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGTT...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp ACAAGGGCCAGAATACATTTCTGTCACCATGTCATGATATTCGGTCACTACTCCTTAACCCGATCCATATaGAACATCTGCATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TRARIHFCHHVMIFGHYSLTRSI*NICIAE
Trigger: CTCAGCTATGCAGATGTTCAATATGGATCGGGTTAA...GGAGTAGTGACCGAATATCATGACATGGTGACAGAAATGTATTCTGGCCCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTCTGTTGAATCTCCATaGCTACACAAGGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTSVESP*LHKGQN
Trigger: ATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAGA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp GTGAACAGCATTCTGGATCTTAGTTTTACCAAAGATTGCTCTGAGAGTTCCAGGGTGTGTGATTCACTCTaGTCTAAATGTCCCAACCTG +
Preference number: 5 (lower is better)
Translates to: VNSILDLSFTKDCSESSRVCDSL*SKCPNL
Trigger: CAGGTTGGGACATTTAGACAAGAGTGAATCACACAC...CCTGGAACTCTCAGAGCAATCTTTGGTAAAACTAAGATCCAGAATGCTGTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525440.5
CDS GCA 90 bp GTTCATTTCAACCTTGGTGAATCTAATGATTATGTGTCTTGGGGTTaGTCTTCTCGAGGAGCATCTTTGTGGTGTTCTCTGTATTTCCTG +
Preference number: 5 (lower is better)
Translates to: VHFNLGESNDYVSWG*SSRGASLWCSLYFL
Trigger: CAGGAAATACAGAGAACACCACAAAGATGCTCCTCGAGAAGAGCAACCCCAAGACACATAATCATTAGATTCACCAAGGTTGAAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCGAAGAAGTGAAGCATTaGGATCATACCACTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTEEVKH*DHTTLQ
Trigger: TTGCAGAGTGGTATGATCCAAATGCTTCACTTCTTC...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367811.8
ENST00000525440.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCAACTGGATCAGCTCATaGAAAAAGGGTCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFNWISS*KKGLDW
Trigger: CCAGTCAAGACCCTTTTTCAATGAGCTGATCCAGTT...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTTAACCCGATCCATATaGAACATCTGCATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTLTRSI*NICIAE
Trigger: CTCAGCTATGCAGATGTTCAATATGGATCGGGTTAA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTCTGTTGAATCTCCATaGCTACACAAGGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFSVESP*LHKGQN
Trigger: ATTCTGGCCCTTGTGTAGCAATGGAGATTCAACAGA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp TCCCAACAGTCCATCATAGGGACAGCAGAGAAGACCTATGGGAATGAAGATTTCTGTAGCATTATTCTGTaGAATCTCCATTGCTACACA +
Preference number: 5 (lower is better)
Translates to: SQQSIIGTAEKTYGNEDFCSIIL*NLHCYT
Trigger: TGTGTAGCAATGGAGATTCAACAGAATAATGCTACA...GAAATCTTCATTCCCATAGGTCTTCTCTGCTGTCCCTATGATGGACTGTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGTGTGTGATTCACTCTaGTCTAAATGTCCCAACCTG +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFVCDSL*SKCPNL
Trigger: CAGGTTGGGACATTTAGACAAGAGTGAATCACACAC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS TCA 90 bp AATAATAGGACCAGTTGTAATAAACTGGATCAGCTCATACCTGGATaGTGGGATCCATACTCCAAACCTCAGCATCACACAATATTCCCA +
Preference number: 5 (lower is better)
Translates to: NNRTSCNKLDQLIPG*WDPYSKPQHHTIFP
Trigger: TGGGAATATTGTGTGATGCTGAGGTTTGGAGTATGGATCCCATCATCCAGGTATGAGCTGATCCAGTTTATTACAACTGGTCCTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491225.5
CDS CCA 90 bp TCTCTTAAAATCTCCATGGCAATAATAGGACCAGTTGTAATAAACTaGATCAGCTCATACCTGGATGATGGGATCCATACTCCAAACCTC +
Preference number: 5 (lower is better)
Translates to: SLKISMAIIGPVVIN*ISSYLDDGIHTPNL
Trigger: GAGGTTTGGAGTATGGATCCCATCATCCAGGTATGAGCTGATCCAGTTTATTACAACTGGTCCTATTATTGCCATGGAGATTTTAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491225.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTTTCACTATGATTCATaGTCTCAGGATCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTFHYDS*SQDLST
Trigger: AGTGCTGAGATCCTGAGACAATGAATCATAGTGAAA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367811.8
ENST00000525440.5
CDS-3UTR CAA 90 bp TTGAATCTCCATTGCTACACAAGGGCCAGAATACATTTCTGTCACCATGTCATGTTTCACTATGATTCATaGTCTCAGGATCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: LNLHCYTRARIHFCHHVMFHYDS*SQDLST
Trigger: AGTGCTGAGATCCTGAGACAATGAATCATAGTGAAA...CATGACATGGTGACAGAAATGTATTCTGGCCCTTGTGTAGCAATGGAGATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528517.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTGCAGGTTATCATATTaGGTCCGCTTTAAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTCRLSY*VRFKKV
Trigger: CACCTTTTTAAAGCGGACCAAATATGATAACCTGCA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTTAACCCGATCCATATaGAACATCTGCATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFLTRSI*NICIAE
Trigger: CTCAGCTATGCAGATGTTCAATATGGATCGGGTTAA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS TCA 90 bp CATAACGTCGAAGAAGTGAAGCATTTGGATCATACCACTCTGCAATaGAAACGAATCTTTCACTATGATTCATTGTCTCAGGATCTCAGC +
Preference number: 5 (lower is better)
Translates to: HNVEEVKHLDHTTLQ*KRIFHYDSLSQDLS
Trigger: GCTGAGATCCTGAGACAATGAATCATAGTGAAAGATTCGTTTTCATTGCAGAGTGGTATGATCCAAATGCTTCACTTCTTCGACGTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367811.8
ENST00000485609.5
ENST00000491225.5
ENST00000524967.5
ENST00000525440.5
ENST00000527460.1
ENST00000528517.5
CDS GCA 90 bp AATAATAGGACCAGTTGTAATAAACTGGATCAGCTCACTGTTCATTaGAGCACTATACAAAATAGCAAAGACATGGAATCAACCCAGGCG +
Preference number: 5 (lower is better)
Translates to: NNRTSCNKLDQLTVH*STIQNSKDMESTQA
Trigger: CGCCTGGGTTGATTCCATGTCTTTGCTATTTTGTATAGTGCTGCAATGAACAGTGAGCTGATCCAGTTTATTACAACTGGTCCTATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469474.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTGCAGGTTATCATATTaGGTCCGCTTTAAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFCRLSY*VRFKKV
Trigger: CACCTTTTTAAAGCGGACCAAATATGATAACCTGCA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp GTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCCACACCTGTAGCATTATTCTGTaGAATCTCCATTGCTACACA +
Preference number: 5 (lower is better)
Translates to: VIHSCLNVPTCDFFTFHTCSIIL*NLHCYT
Trigger: TGTGTAGCAATGGAGATTCAACAGAATAATGCTACA...GGTGTGGAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCGAAGAAGTGAAGCATTaGGATCATACCACTCATTGT +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFEEVKH*DHTTHC
Trigger: ACAATGAGTGGTATGATCCAAATGCTTCACTTCTTC...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472647.5
CDS TCA 90 bp CAAATATACACGGGTGTATGTATGTGCATGTGTGTGTGTACAGGTTaGATATTCCTTACAGAAATGCTTGTGACAAGCAGTGTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QIYTGVCMCMCVCTG*IFLTEMLVTSSVLD
Trigger: ATCCAAAACACTGCTTGTCACAAGCATTTCTGTAAGGAATATTCAACCTGTACACACACACATGCACATACATACACCCGTGTATATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS-3UTR CAA 90 bp TCGTGTGTGATTCACTCTTGTCTAAATGTCCCAACCTGTGACTTCTTTACTTTCTGTAGCATTATTCTGTaGAATCTCCATTGCTACACA +
Preference number: 5 (lower is better)
Translates to: SCVIHSCLNVPTCDFFTFCSIIL*NLHCYT
Trigger: TGTGTAGCAATGGAGATTCAACAGAATAATGCTACA...GAAAGTAAAGAAGTCACAGGTTGGGACATTTAGACAAGAGTGAATCACACACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367811.8
ENST00000472647.5
ENST00000525440.5
CDS GCA 90 bp ATTGATTTGACTATTGATAGTTGTGTATTCTTCACAAAGTTCTTGTaGTATGCTTTTCAGCTCCATCAGGTCATTCATGTTCTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: IDLTIDSCVFFTKFL*YAFQLHQVIHVLLC
Trigger: GCAGAGAAGAACATGAATGACCTGATGGAGCTGAAAAGCATAGCACAAGAACTTTGTGAAGAATACACAACTATCAATAGTCAAATCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CCA 90 bp TCTCTTAAAATCTCCATGGCAATAATAGGACCAGTTGTAATAAACTaGATCAGCTCACTGTTCATTGCAGCACTATACAAAATAGCAAAG +
Preference number: 5 (lower is better)
Translates to: SLKISMAIIGPVVIN*ISSLFIAALYKIAK
Trigger: CTTTGCTATTTTGTATAGTGCTGCAATGAACAGTGAGCTGATCCAGTTTATTACAACTGGTCCTATTATTGCCATGGAGATTTTAAGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469474.5
CDS CCA 90 bp CATCCTCAATTTCCATTCCAAATTAGGAGAAACAACTTAATCTCATaGAACCTTAGCTTGCCTATCTGGAAAAGAGCAACAAATTTACCT +
Preference number: 5 (lower is better)
Translates to: HPQFPFQIRRNNLIS*NLSLPIWKRATNLP
Trigger: AGGTAAATTTGTTGCTCTTTTCCAGATAGGCAAGCTAAGGTTCCATGAGATTAAGTTGTTTCTCCTAATTTGGAATGGAAATTGAGGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS GCA 72 bp ACCTCTTCGTCCTTAGTGGCTGGGAGTAATCTCAGCTaGGTTCATCCAATCGACAGACCCGCCCCTCCACGC +
Preference number: 6 (lower is better)
Translates to: TSSSLVAGSNLS*VHPIDRPAPPR
Trigger: GCGTGGAGGGGCGGGTCTGTCGATTGGATGAACGCAGCTGAGATTACTCCCAGCCACTAAGGACGAAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000472647.5
ENST00000485609.5
ENST00000525440.5
CDS GCA 72 bp GCTTTCAGAAGCATCTGTGCGTGCCACTCCAGAGTTTaGAGGTCCCAGCAGTCTTTTCCATTCACATATAGC +
Preference number: 6 (lower is better)
Translates to: AFRSICACHSRV*RSQQSFPFTYS
Trigger: GCTATATGTGAATGGAAAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000367811.8
ENST00000469474.5
ENST00000472647.5
ENST00000472984.1
ENST00000480478.5
ENST00000483228.5
ENST00000485609.5
ENST00000491225.5
ENST00000524967.5
ENST00000525440.5
ENST00000528517.5
CDS GCA 72 bp AAAGAGGGCTCTAATGCTTTCAGAAGCATCTGTGCGTaGCACTCCAGAGTTTGCAGGTCCCAGCAGTCTTTT +
Preference number: 6 (lower is better)
Translates to: KEGSNAFRSICA*HSRVCRSQQSF
Trigger: AAAAGACTGCTGGGACCTGCAAACTCTGGAGTGGCACGCACAGATGCTTCTGAAAGCATTAGAGCCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000367811.8
ENST00000469474.5
ENST00000472647.5
ENST00000472984.1
ENST00000480478.5
ENST00000483228.5
ENST00000485609.5
ENST00000491225.5
ENST00000524967.5
ENST00000525440.5
ENST00000528517.5
CDS TCA 72 bp ACCAGTTGTAATAAACTGGATCAGCTCATACCTGGATaGTGGGATCCATACTCCAAACCTCAGCATCACACA +
Preference number: 6 (lower is better)
Translates to: TSCNKLDQLIPG*WDPYSKPQHHT
Trigger: TGTGTGATGCTGAGGTTTGGAGTATGGATCCCATCATCCAGGTATGAGCTGATCCAGTTTATTACAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491225.5
CDS GCA 72 bp AACCTTGGTGAATCTAATGATTATGTGTCTTGGGGTTaGTCTTCTCGAGGAGCATCTTTGTGGTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: NLGESNDYVSWG*SSRGASLWCSL
Trigger: CAGAGAACACCACAAAGATGCTCCTCGAGAAGAGCAACCCCAAGACACATAATCATTAGATTCACCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 72 bp CCCCGTCACTTTCAGGTACACCAATCAAACGCAGATTaGTCTTTTCACATAATCCCATATTTCTTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: PRHFQVHQSNAD*SFHIIPYFLEA
Trigger: AGCCTCCAAGAAATATGGGATTATGTGAAAAGACAAATCTGCGTTTGATTGGTGTACCTGAAAGTGACGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS TCA 72 bp ACGGGTGTATGTATGTGCATGTGTGTGTGTACAGGTTaGATATTCCTTACAGAAATGCTTGTGACAAGCAGT +
Preference number: 6 (lower is better)
Translates to: TGVCMCMCVCTG*IFLTEMLVTSS
Trigger: ACTGCTTGTCACAAGCATTTCTGTAAGGAATATTCAACCTGTACACACACACATGCACATACATACACCCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CCA 72 bp ATCTCCATGGCAATAATAGGACCAGTTGTAATAAACTaGATCAGCTCATACCTGGATGATGGGATCCATACT +
Preference number: 6 (lower is better)
Translates to: ISMAIIGPVVIN*ISSYLDDGIHT
Trigger: AGTATGGATCCCATCATCCAGGTATGAGCTGATCCAGTTTATTACAACTGGTCCTATTATTGCCATGGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491225.5
CDS CAA 90 bp TCCCATTCTCCCCGTCACTTTCAGGTACACCAATCAAACGCAGATTaGTCTTTTCACATAATCCCATATTTCTTGGAGGCTTTGTTCATT +
Preference number: 6 (lower is better)
Translates to: SHSPRHFQVHQSNAD*SFHIIPYFLEALFI
Trigger: AATGAACAAAGCCTCCAAGAAATATGGGATTATGTGAAAAGACAAATCTGCGTTTGATTGGTGTACCTGAAAGTGACGGGGAGAATGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 90 bp TCTAATGATTATGTGTCTTGGGGTTGCTCTTCTCGAGGAGCATCTTaGTGGTGTTCTCTGTATTTCCTGAATTTGAATGTTGGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: SNDYVSWGCSSRGAS*WCSLYFLNLNVGLF
Trigger: AAACAGACCAACATTCAAATTCAGGAAATACAGAGAACACCACAAAGATGCTCCTCGAGAAGAGCAACCCCAAGACACATAATCATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 72 bp TTTTCATGTGTTTGTTGGGTGCATGAATGTCTTCTTTaGAGAAGGGTCTGTCCATGTCCTTTGACCACTTTT +
Preference number: 6 (lower is better)
Translates to: FSCVCWVHECLL*RRVCPCPLTTF
Trigger: AAAAGTGGTCAAAGGACATGGACAGACCCTTCTCAAAAGAAGACATTCATGCACCCAACAAACACATGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 90 bp ACAAATATACACGGGTGTATGTATGTGCATGTGTGTGTGTACAGGTaGAATATTCCTTACAGAAATGCTTGTGACAAGCAGTGTTTTGGA +
Preference number: 6 (lower is better)
Translates to: TNIHGCMYVHVCVYR*NIPYRNACDKQCFG
Trigger: TCCAAAACACTGCTTGTCACAAGCATTTCTGTAAGGAATATTCAACCTGTACACACACACATGCACATACATACACCCGTGTATATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CCA 72 bp ATCTCCATGGCAATAATAGGACCAGTTGTAATAAACTaGATCAGCTCACTGTTCATTGCAGCACTATACAAA +
Preference number: 6 (lower is better)
Translates to: ISMAIIGPVVIN*ISSLFIAALYK
Trigger: TTTGTATAGTGCTGCAATGAACAGTGAGCTGATCCAGTTTATTACAACTGGTCCTATTATTGCCATGGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469474.5
CDS CAA 72 bp AAAATAAAAGCTCATAACGTCGAAGAAGTGAAGCATTaGGATCATACCACTCATTGTCTCAGGATCTCAGCA +
Preference number: 6 (lower is better)
Translates to: KIKAHNVEEVKH*DHTTHCLRISA
Trigger: TGCTGAGATCCTGAGACAATGAGTGGTATGATCCAAATGCTTCACTTCTTCGACGTTATGAGCTTTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472647.5
CDS GCA 72 bp ACCAGTTGTAATAAACTGGATCAGCTCACTGTTCATTaGAGCACTATACAAAATAGCAAAGACATGGAATCA +
Preference number: 6 (lower is better)
Translates to: TSCNKLDQLTVH*STIQNSKDMES
Trigger: TGATTCCATGTCTTTGCTATTTTGTATAGTGCTGCAATGAACAGTGAGCTGATCCAGTTTATTACAACTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469474.5
CDS CCA 72 bp TTTCCATTCCAAATTAGGAGAAACAACTTAATCTCATaGAACCTTAGCTTGCCTATCTGGAAAAGAGCAACA +
Preference number: 6 (lower is better)
Translates to: FPFQIRRNNLIS*NLSLPIWKRAT
Trigger: TGTTGCTCTTTTCCAGATAGGCAAGCTAAGGTTCCATGAGATTAAGTTGTTTCTCCTAATTTGGAATGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 72 bp TTCAGCTCCATCAGGTCATTCATGTTCTTCTCTGCATaGGTTATTCTAGTTAGCAATTTGACTTCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: FSSIRSFMFFSA*VILVSNLTSAF
Trigger: AAAAGCTGAAGTCAAATTGCTAACTAGAATAACCAATGCAGAGAAGAACATGAATGACCTGATGGAGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS GCA 72 bp ACTATTGATAGTTGTGTATTCTTCACAAAGTTCTTGTaGTATGCTTTTCAGCTCCATCAGGTCATTCATGTT +
Preference number: 6 (lower is better)
Translates to: TIDSCVFFTKFL*YAFQLHQVIHV
Trigger: AACATGAATGACCTGATGGAGCTGAAAAGCATAGCACAAGAACTTTGTGAAGAATACACAACTATCAATAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 72 bp ATTAGGAGAAACAACTTAATCTCATGGAACCTTAGCTaGCCTATCTGGAAAAGAGCAACAAATTTACCTACT +
Preference number: 6 (lower is better)
Translates to: IRRNNLISWNLS*PIWKRATNLPT
Trigger: AGTAGGTAAATTTGTTGCTCTTTTCCAGATAGGCAAGCTAAGGTTCCATGAGATTAAGTTGTTTCTCCTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS CAA 72 bp ATTTCCTTTGAGCTTCATGTCTGTGCTCAAAAAGTTTaGGAGTTTGGAGTAATTTGGGTTTCAGATTTTTGG +
Preference number: 6 (lower is better)
Translates to: ISFELHVCAQKV*EFGVIWVSDFW
Trigger: CCAAAAATCTGAAACCCAAATTACTCCAAACTCCAAAACTTTTTGAGCACAGACATGAAGCTCAAAGGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524967.5
CDS TCA 72 bp TTCTTTACTTTCCACACCACTAATTATCCAAGATCTTaGAGAAGTATTGAACGGAACAGAGATGTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: FFTFHTTNYPRS*RSIERNRDVFF
Trigger: AAAGAAGACATCTCTGTTCCGTTCAATACTTCTTCAAGATCTTGGATAATTAGTGGTGTGGAAAGTAAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530739.5