Pregenerated sensors for NME5 (Homo sapiens)
Ensembl gene IDs: ENSG00000112981Ensembl transcript IDs: ENST00000265191.4, ENST00000506657.1, ENST00000511353.1, ENST00000512954.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATaGTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGT | + |
|
Preference number: 1 (lower is better) Translates to: LREAYLTHEHETKSP*LWTTKGPKPFKLDC Trigger: ACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| 3UTR CCA 90 bp | GAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATaGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAAC | + |
|
Preference number: 1 (lower is better) Translates to: EAYLTHEHETKSPCL*TTKGPKPFKLDCLN Trigger: GTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| 3UTR CCA 72 bp | CTGACACATGAGCATGAAACCAAATCACCATGCTTATaGACTACAAAAGGACCTAAGCCTTTTAAACTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTHEHETKSPCL*TTKGPKPFKLD Trigger: GTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| 3UTR GCA 72 bp | GCATATCTGACACATGAGCATGAAACCAAATCACCATaGTTATGGACTACAAAAGGACCTAAGCCTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: AYLTHEHETKSP*LWTTKGPKPFK Trigger: TTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGTGCCCTCAGACTGTCTaGATGTGTCTCCTTCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LREAYLTHEHETKSPCLWCPQTV*MCLLRY Trigger: GTAGCGAAGGAGACACATCCAGACAGTCTGAGGGCA...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR GCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGATCTGTGCCATAAATTaGCCTCAGACTGTCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LREAYLTHEHETKSPCLWICAIN*PQTVWM Trigger: CATCCAGACAGTCTGAGGGCAATTTATGGCACAGAT...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTGCGGCCGTCCTCATATaGTACAACTTGTTGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCAAVLI*YNLLLG Trigger: TCCTAGCAACAAGTTGTACCATATGAGGACGGCCGC...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGAGCAGCTTGTCCAATTaGAATGGGCTCAACAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LREAYLTHEHETKSPCLWSSLSN*NGLNNH Trigger: GTGATTGTTGAGCCCATTCCAATTGGACAAGCTGCT...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTCTGAGGTGGAGGCATTaGTATCTCCATTATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCLRWRH*YLHYGS Trigger: TGAGCCATAATGGAGATATCAATGCCTCCACCTCAG...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGCGTAGTTTTCTTCTCTaGACAATGGTGAATCCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LREAYLTHEHETKSPCLWRSFLL*TMVNPD Trigger: ATCCGGATTCACCATTGTTCAGAGAAGAAAACTACG...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTTACATTGCTCAGGGCTaGGGCGTAGTTTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCYIAQG*GVVFFS Trigger: AGAGAAGAAAACTACGCCTCAGCCCTGAGCAATGTA...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGAAGTCATTACTCCCATaGAGTGCATTCCTTAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LREAYLTHEHETKSPCLWKSLLP*SAFLRS Trigger: TGACCTAAGGAATGCACTTCATGGGAGTAATGACTT...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTGCTTACAAAGCTCTGTaGGTCCTTCAAGCAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCAYKAL*VLQAEL Trigger: CAACTCTGCTTGAAGGACTCACAGAGCTTTGTAAGC...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR GCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTTCCTTAGGTCATCTGTaGCATAAATTGCCCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCSLGHL*HKLPSD Trigger: GTCTGAGGGCAATTTATGGCACAGATGACCTAAGGA...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTTATCATGGCGACAAGTaGTCCAGAACTCATGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCYHGDK*SRTHVS Trigger: GCTTACATGAGTTCTGGACCACTTGTCGCCATGATA...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGTTTTCTACATATATCTaGGGTGGAGGCATTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: LREAYLTHEHETKSPCLWFSTYI*GGGIDI Trigger: GATATCAATGCCTCCACCTCAGATATATGTAGAAAA...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR GCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTGGATCTGCTGGTTTTTaGTTACAAAGCTCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCGSAGF*LQSSVS Trigger: ACTCACAGAGCTTTGTAAGCAAAAACCAGCAGATCC...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTCTTGTCCAATTGGAATaGGCTCAACAATCACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCLVQLE*AQQSLQ Trigger: CTGAAGTGATTGTTGAGCCCATTCCAATTGGACAAG...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR TCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTTCTACAATTGGATGGTaGCAAAGTTTGGGTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCSTIGW*QSLGLL Trigger: TAACAAACCCAAACTTTGTCACCATCCAATTGTAGA...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTAATCAAAGGATCTGCTaGTTTTTGCTTACAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCNQRIC*FLLTKL Trigger: GAGCTTTGTAAGCAAAAACCAGCAGATCCTTTGATT...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CCA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTTTTGTCAACAATATCTaGTTTGATAATGGCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCFVNNI*FDNGQS Trigger: ACTCTGGCCATTATCAAACCAGATATTGTTGACAAA...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGAGGATCTGCTGGTTTTaGCTTACAAAGCTCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LREAYLTHEHETKSPCLWRICWF*LTKLCE Trigger: CTCACAGAGCTTTGTAAGCAAAAACCAGCAGATCCT...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTATATGGTACAACTTGTaGCTAGGAGACCTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCIWYNL*LGDLKP Trigger: GGGCTTCAGGTCTCCTAGCAACAAGTTGTACCATAT...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTTCTGAGGTGGAGGCATaGATATCTCCATTATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCSEVEA*ISPLWL Trigger: GAGCCATAATGGAGATATCAATGCCTCCACCTCAGA...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTCATCTGTGCCATAAATaGCCCTCAGACTGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCHLCHK*PSDCLD Trigger: ATCCAGACAGTCTGAGGGCAATTTATGGCACAGATG...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTATAGTCCTTAGCAGCTaGTCCAATTGGAATGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCIVLSS*SNWNGL Trigger: GAGCCCATTCCAATTGGACAAGCTGCTAAGGACTAT...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTATGGACTACAAAAGGACCTAAGCCTTTTAAACTAGACTGTCTCAACTGTCTCATATGGTACAACTaGTTGCTAGGAGACCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLWTTKGPKPFKLDCLNCLIWYN*LLGDLK Trigger: CTTCAGGTCTCCTAGCAACAAGTTGTACCATATGAG...ACAGTTGAGACAGTCTAGTTTAAAAGGCTTAGGTCCTTTTGTAGTCCATAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGAAGGTTCTTCTACAATaGGATGGTGACAAAGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LREAYLTHEHETKSPCLWKVLLQ*DGDKVW Trigger: CCAAACTTTGTCACCATCCAATTGTAGAAGAACCTT...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS-3UTR CAA 90 bp | TTGAGGGAAGCATATCTGACACATGAGCATGAAACCAAATCACCATGCTTATGGCTACTAAGCTATTATTaGGTCCCAAAAGTTCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: LREAYLTHEHETKSPCLWLLSYY*VPKVLT Trigger: GGTTAGAACTTTTGGGACCAAATAATAGCTTAGTAG...CCATAAGCATGGTGATTTGGTTTCATGCTCATGTGTCAGATATGCTTCCCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265191.4 |
||
| CDS TCA 90 bp | CTAGCCAAATCAAAGGATCTGCTGGTTTTTGCTTACAAAGCTCTGTaGGTCCTTCAAGCAGAGTTGGCATTATATGTAAATTTAAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAKSKDLLVFAYKAL*VLQAELALYVNLNS Trigger: ACTATTTAAATTTACATATAATGCCAACTCTGCTTGAAGGACTCACAGAGCTTTGTAAGCAAAAACCAGCAGATCCTTTGATTTGGCTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000265191.4 ENST00000506657.1 |
||
| CDS CAA 72 bp | TATATCTCAGCGGCCGTCCTCATATGGTACAACTTGTaGCTAGGAGACCTGAAGCCCCAGCGTGGGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: YISAAVLIWYNL*LGDLKPQRGDG Trigger: ACCGTCCCCACGCTGGGGCTTCAGGTCTCCTAGCAACAAGTTGTACCATATGAGGACGGCCGCTGAGATATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512954.1 |
||
| CDS CAA 72 bp | ACATATATCTCAGCGGCCGTCCTCATATGGTACAACTaGTTGCTAGGAGACCTGAAGCCCCAGCGTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TYISAAVLIWYN*LLGDLKPQRGD Trigger: GTCCCCACGCTGGGGCTTCAGGTCTCCTAGCAACAAGTTGTACCATATGAGGACGGCCGCTGAGATATATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512954.1 |
||
| CDS CCA 72 bp | GTGTTAAGTGGTTGCCTCTCTCTGGAGCCTGGGACTTaGGGTAAAAGAGGACAGGTGAAGGAAAAGTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: VLSGCLSLEPGT*GKRGQVKEKSI Trigger: AATGGACTTTTCCTTCACCTGTCCTCTTTTACCCCAAGTCCCAGGCTCCAGAGAGAGGCAACCACTTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512954.1 |
||
| CDS GCA 72 bp | CAATCAGCTAGCCAAATCAAAGGATCTGCTGGTTTTTaGTTACAAAGCTCTGTGAGTCCTTCAAGCAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: QSASQIKGSAGF*LQSSVSPSSRV Trigger: AACTCTGCTTGAAGGACTCACAGAGCTTTGTAAGCAAAAACCAGCAGATCCTTTGATTTGGCTAGCTGATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000265191.4 ENST00000506657.1 |
||
| CDS TCA 72 bp | TCAAAGGATCTGCTGGTTTTTGCTTACAAAGCTCTGTaGGTCCTTCAAGCAGAGTTGGCATTATATGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SKDLLVFAYKAL*VLQAELALYVN Trigger: ATTTACATATAATGCCAACTCTGCTTGAAGGACTCACAGAGCTTTGTAAGCAAAAACCAGCAGATCCTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000265191.4 ENST00000506657.1 |
||
| CDS CAA 72 bp | CCGGATCTAAGAATAATATCTTGTATCTCCTCCTCTTaGTCAACAATATCTGGTTTGATAATGGCCAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PDLRIISCISSS*STISGLIMARV Trigger: AACTCTGGCCATTATCAAACCAGATATTGTTGACAAAGAGGAGGAGATACAAGATATTATTCTTAGATCCGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000265191.4 ENST00000511353.1 ENST00000512954.1 |
||
| CDS CAA 90 bp | AGAAGTTACCTGAACAATGGTGAATCCGGATCTAAGAATAATATCTaGTATCTCCTCCTCTTTGTCAACAATATCTGGTTTGATAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSYLNNGESGSKNNI*YLLLFVNNIWFDNG Trigger: GCCATTATCAAACCAGATATTGTTGACAAAGAGGAGGAGATACAAGATATTATTCTTAGATCCGGATTCACCATTGTTCAGGTAACTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512954.1 |
||
| CDS CAA 90 bp | TTTTCTTCTCTGAACAATGGTGAATCCGGATCTAAGAATAATATCTaGTATCTCCTCCTCTTTGTCAACAATATCTGGTTTGATAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSLNNGESGSKNNI*YLLLFVNNIWFDNG Trigger: GCCATTATCAAACCAGATATTGTTGACAAAGAGGAGGAGATACAAGATATTATTCTTAGATCCGGATTCACCATTGTTCAGAGAAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000265191.4 ENST00000511353.1 |
||
| CDS CAA 72 bp | CTGAACAATGGTGAATCCGGATCTAAGAATAATATCTaGTATCTCCTCCTCTTTGTCAACAATATCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LNNGESGSKNNI*YLLLFVNNIWF Trigger: AAACCAGATATTGTTGACAAAGAGGAGGAGATACAAGATATTATTCTTAGATCCGGATTCACCATTGTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000265191.4 ENST00000511353.1 ENST00000512954.1 |
||