RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NME4 (Homo sapiens)

Ensembl gene IDs: ENSG00000103202

Ensembl transcript IDs: ENST00000219479.7, ENST00000382940.8, ENST00000397722.5, ENST00000433358.5, ENST00000444498.5, ENST00000448828.5, ENST00000450036.1, ENST00000454619.5, ENST00000460297.1, ENST00000468031.1, ENST00000620944.4, ENST00000621774.4

Found 292 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCAGGTGAGCCCTGGAAACACGGACAAAAAGGGGCCTGAAGATTaGAGAGGGAAGGTAGCAGGGTTCTGTCCGAGCCAGGAGACGGGG +
Preference number: 1 (lower is better)
Translates to: HQVSPGNTDKKGPED*RGKVAGFCPSQETG
Trigger: CCCCGTCTCCTGGCTCGGACAGAACCCTGCTACCTTCCCTCTTCAATCTTCAGGCCCCTTTTTGTCCGTGTTTCCAGGGCTCACCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR CCA 90 bp GCACAGTTAATGAGAATGTCGATTCTGCCAAACTCCTTCAGAGCCTaGTCCACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATA +
Preference number: 1 (lower is better)
Translates to: AQLMRMSILPNSFRA*STAAMTAGGARTSI
Trigger: TATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGTGGACCAGGCTCTGAAGGAGTTTGGCAGAATCGACATTCTCATTAACTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
3UTR-3UTR TCA 90 bp GAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCGGCCGCACAGTTAATGAGGGTCCACGGCGGCCATaGCAGCTGGGGGCGCTCGGA +
Preference number: 2 (lower is better)
Translates to: EGQGASGAQEVPGRTVNEGPRRP*QLGALG
Trigger: TCCGAGCGCCCCCAGCTGTCATGGCCGCCGTGGACC...CTCATTAACTGTGCGGCCGGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444498.5
3UTR-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 2 (lower is better)
Translates to: VLADGGSWSCVGDGVVRASWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433358.5
ENST00000448828.5
3UTR-3UTR CCA 90 bp GCGCCAGCGGGGCACAGGAAGTTCCCGGCCGCACAGTTAATGAGAATGTCGATTGGCGGCCATGACAGCTaGGGGCGCTCGGACGTCCAT +
Preference number: 2 (lower is better)
Translates to: APAGHRKFPAAQLMRMSIGGHDS*GRSDVH
Trigger: ATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCC...AATCGACATTCTCATTAACTGTGCGGCCGGGAACTTCCTGTGCCCCGCTGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
3UTR-3UTR CCA 90 bp CTTGAAGGCGTTGAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCGGCCGCAACTCCTTCAGAGCCTaGTCCACGGCGGCCATGACA +
Preference number: 2 (lower is better)
Translates to: LEGVEGQGASGAQEVPGRNSFRA*STAAMT
Trigger: TGTCATGGCCGCCGTGGACCAGGCTCTGAAGGAGTT...GCGGCCGGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTCAACGCCTTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444498.5
3UTR-3UTR TCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGTCTTTCCCCACCAGGTaGGCCCTGGAAACACGGACA +
Preference number: 2 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQSFPTR*ALETRT
Trigger: TGTCCGTGTTTCCAGGGCTCACCTGGTGGGGAAAGA...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAAGGAGACGGGGCCTGTaGTGCTGTGGAGTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: VLADGGSWSCVGDGVVRARRRGL*CCGVSR
Trigger: CCTTGAAACTCCACAGCAGCACAGGCCCCGTCTCCT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAACGGAGTCGCTGGCGTaGATGACATTCCTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: VLADGGSWSCVGDGVVRATESLA*MTFLCQ
Trigger: CTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
3UTR-3UTR CCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGCCACCAGGTGAGCCCTaGAAACACGGACAAAAAGGG +
Preference number: 2 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQPPGEP*KHGQKG
Trigger: CCCTTTTTGTCCGTGTTTCCAGGGCTCACCTGGTGG...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR CCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGGGCAAGGACGCTCTCTaGTGCCTGCAGCATCTTCAT +
Preference number: 2 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQGKDAL*CLQHLH
Trigger: ATGAAGATGCTGCAGGCACCAGAGAGCGTCCTTGCC...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR TCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGGGACAAAAAGGGGCCTaGAGATTGAAGAGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQGQKGA*RLKREG
Trigger: ACCTTCCCTCTTCAATCTTCAGGCCCCTTTTTGTCC...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 2 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCATGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 2 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR CCA 90 bp GCCGCACAGTTAATGAGAATGTCGATTCTGCCAAACTCCTTCAGAGCCTGGTCCCCCCAGCCAGCTTCCTaGCGGCCTGTAATCCTGGCA +
Preference number: 2 (lower is better)
Translates to: AAQLMRMSILPNSFRAWSPQPAS*RPVILA
Trigger: TGCCAGGATTACAGGCCGCCAGGAAGCTGGCTGGGG...GGACCAGGCTCTGAAGGAGTTTGGCAGAATCGACATTCTCATTAACTGTGCGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000444498.5
3UTR-3UTR TCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAGTCGCTGGCGTGGATaGCATTCCTGTGCCAGGACA +
Preference number: 2 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLSRWRG*HSCART
Trigger: TGTCCTGGCACAGGAATGTCATCCACGCCAGCGACT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433358.5
3UTR-3UTR GCA 90 bp CCCTTATGGTTCCTGGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCATGGCCCATTGGTCCAATCTTGTaGTGGCTTGGGGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: PLWFLGQPQPSRCVQSWPIGPIL*WLGVQK
Trigger: TTTCTGTACCCCAAGCCAGCACAAGATTGGACCAAT...GGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR GCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGTGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 2 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQCPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAGACGGGGCCTGTGCTaGTGTGGAGTTTCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLRRGLC*CGVSRP
Trigger: AGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR GCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 2 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR GCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 2 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 2 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTGCTGACGGAGGTAGTTaGTCCTGCGTGGGGGATGGG +
Preference number: 2 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISADGGS*SCVGDG
Trigger: CCCATCCCCCACGCAGGACCAACTACCTCCGTCAGC...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR GCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 2 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTTGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 2 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTTGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 2 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR TCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTATGTGCTGGGCACAGTaGATTTTAATGCCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFMCWAQ*ILMPPL
Trigger: AAGGGGAGGCATTAAAATTCACTGTGCCCAGCACAT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR GCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTTGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 2 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPCPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR GCA 72 bp CAGGGTTCTGTCCGAGCCAGGAGACGGGGCCTGTGCTaGTGTGGAGTTTCAAGGCCTGTCGCTTCCAGACCC +
Preference number: 3 (lower is better)
Translates to: QGSVRARRRGLC*CGVSRPVASRP
Trigger: GGGTCTGGAAGCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCTCCTGGCTCGGACAGAACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR-3UTR CAA 90 bp CCCTTATGGTTCCTGGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCATGGCCCCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 3 (lower is better)
Translates to: PLWFLGQPQPSRCVQSWPPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...GGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR CCA 72 bp GCTGATGTGGACGCTGAAGTCACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCAT +
Preference number: 3 (lower is better)
Translates to: ADVDAEVTPYGS*GSLSRVGVSNH
Trigger: ATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGTGACTTCAGCGTCCACATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
3UTR GCA 72 bp CGGCACTTTGGTGCAAAAAGGATTGGTCCAATCTTGTaGTGGCTTGGGGTACAGAAAGGCACTGAAGTTGGT +
Preference number: 3 (lower is better)
Translates to: RHFGAKRIGPIL*WLGVQKGTEVG
Trigger: ACCAACTTCAGTGCCTTTCTGTACCCCAAGCCAGCACAAGATTGGACCAATCCTTTTTGCACCAAAGTGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 3 (lower is better)
Translates to: LYCSTPYNLHKGVISTSERIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 3 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 3 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 3 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 3 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISRIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTAGGTTGTCCGGCACTTaGGTGCAAAAAGGATTGGTC +
Preference number: 3 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPRLSGT*VQKGLV
Trigger: GACCAATCCTTTTTGCACCAAAGTGCCGGACAACCT...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 3 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 3 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTAGGTTGTCCGGCACTTaGGTGCAAAAAGGATTGGTC +
Preference number: 3 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFRLSGT*VQKGLV
Trigger: GACCAATCCTTTTTGCACCAAAGTGCCGGACAACCT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR-3UTR CAA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTAGGTTGTCCGGCACTTaGGTGCAAAAAGGATTGGTC +
Preference number: 3 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISRLSGT*VQKGLV
Trigger: GACCAATCCTTTTTGCACCAAAGTGCCGGACAACCT...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TCGGACGTCCATAGAGAGAGGGAGGCAGCGCCGGCCGGTGGCCCCAGCCAGCTTAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: SDVHREREAAPAGGPSQLSWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...AAGCTGGCTGGGGCCACCGGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp TCGGACGTCCATAGAGAGAGGGAGGCAGCGCCGGCCGGTGGCCCCAGCCAGCTTTCCGGGCAGAAGAGGTaGCGGTACGCGGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SDVHREREAAPAGGPSQLSGQKR*RYAGRQ
Trigger: CTGTCTCCCCGCGTACCGCCACCTCTTCTGCCCGGA...AAGCTGGCTGGGGCCACCGGCCGGCGCTGCCTCCCTCTCTCTATGGACGTCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTACCCAGGGTCAGCGCTaGGCTCCGCCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAATQGQR*APPQPS
Trigger: GGACGGCTGGGGCGGAGCTCAGCGCTGACCCTGGGT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR GCA 90 bp GCCTGGTCCACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATAGAGAGACCAACGAGCCGCCGTTaGACGCCATCGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: AWSTAAMTAGGARTSIERPTSRR*TPSGFT
Trigger: GGTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGG...TCTCTCTATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGTGGACCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR GCA 90 bp TGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGCCAACGAGCCGCCGTTaGACGCCATCGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: WAPSTESLAWMTFLCQDRPTSRR*TPSGFT
Trigger: GGTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGG...CCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCTCTGCTGCGGCTGGTaGGGGCATTGCAGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAALCCGW*GHCRRR
Trigger: CCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGGGTGGATGCTGCTGTaGTGGCCCCCGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAGWMLL*WPPSAQ
Trigger: CTGGGCAGACGGGGGCCAGCACAGCAGCATCCACCC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAASWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp AGACGGGGCCTGTGCTGCTGTGGAGTTTCAAGGCCTGTCGCTTCCAGACCCAGGAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: RRGLCCCGVSRPVASRPRSWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...CCTGGGTCTGGAAGCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCACCAGCCGTCCTCCTCTaGAGGGGACGCCGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAPAVLL*RGRRAV
Trigger: CACGGCTCGGCGTCCCCTCCAGAGGAGGACGGCTGG...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCGGGGCCGGGGACTTaGGGCCTGACGTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAAGPGT*GLTSQS
Trigger: TGACTGGGACGTCAGGCCCCAAGTCCCCGGCCCCGC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGGGCTCTGCTGCGGCTaGTGCGGGCATTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAGLCCG*CGHCRR
Trigger: CCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR TCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAACCCCAGCAGGCGGCTaGAGCCCACGGGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRATPAGG*SPREED
Trigger: GTCTTCCTCCCGTGGGCTTCAGCCGCCTGCTGGGGT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCAACGAGCCGCCGTTaGACGCCATCGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPTSRR*TPSGFT
Trigger: GGTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGTGCTGGCCCCCGTCTaGCCAGCTCACCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAVLAPV*PAHQLT
Trigger: AGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCAC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AGACGGGGCCTGTGCTGCTGTGGAGTTTCAAGGCCTGTCGCTTCCAGACCCAGGGTGCTGGCCCCCGTCTaGCCAGCTCACCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: RRGLCCCGVSRPVASRPRVLAPV*PAHQLT
Trigger: AGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCAC...CCTGGGTCTGGAAGCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGGGTGGATGCTGCTGTaGTGGCCCCCGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAGWMLL*WPPSAQ
Trigger: CTGGGCAGACGGGGGCCAGCACAGCAGCATCCACCC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGGCTGGGTGGATGCTaGTGTGCTGGCCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARLGGC*CAGPRL
Trigger: CAGACGGGGGCCAGCACAGCAGCATCCACCCAGCCT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGAGGCTGGGTGGATGCTaGTGTGCTGGCCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQRLGGC*CAGPRL
Trigger: CAGACGGGGGCCAGCACAGCAGCATCCACCCAGCCT...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCTCTGGAACCACAGCTaGATCTCCCGCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAALWNHS*ISRWAP
Trigger: GGGGGCCCAGCGGGAGATCCAGCTGTGGTTCCAGAG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTTGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp AGACGGGGCCTGTGCTGCTGTGGAGTTTCAAGGCCTGTCGCTTCCAGACCCAGGTGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RRGLCCCGVSRPVASRPRWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...CCTGGGTCTGGAAGCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp GCCTGGTCCACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATAGAGAGAAACTCCTTCAGAGCCTaGTCCACGGCGGCCATGACA +
Preference number: 4 (lower is better)
Translates to: AWSTAAMTAGGARTSIERNSFRA*STAAMT
Trigger: TGTCATGGCCGCCGTGGACCAGGCTCTGAAGGAGTT...TCTCTCTATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGTGGACCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR TCA 90 bp TGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGAGCTCATGTAGCGGATaGGGGCAGGGTAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: WAPSTESLAWMTFLCQDRSSCSG*GQGRRA
Trigger: AGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCT...CCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCGGGGACTTGGGGCCTaGCGTCCCAGTCAGATTCTG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARGLGA*RPSQIL
Trigger: CAGAATCTGACTGGGACGTCAGGCCCCAAGTCCCCG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCACCAACGAGCCGCCGTTaGACGCCATCGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAPTSRR*TPSGFT
Trigger: GGTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGG...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTGAAGGCGTTGAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCGGCCGCACGCTCTCTGGTGCCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: LEGVEGQGASGAQEVPGRTLSGA*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGCACCAGAGAGCGT...GCGGCCGGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTCAACGCCTTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGTGCTGGCCCCCGTCTaGCCAGCTCACCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAVLAPV*PAHQLT
Trigger: AGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCAC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp TGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGGGCTCAGGCTTCATGTaGACCCTGAGGAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: WAPSTESLAWMTFLCQDRGSGFM*TLRNPR
Trigger: CCTGGGATTCCTCAGGGTGCACATGAAGCCTGAGCC...CCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR GCA 90 bp CTTGAAGGCGTTGAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCGGCCGCTCGGGGACAGCTCACTaGTCTGGAACCACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LEGVEGQGASGAQEVPGRSGTAH*SGTTAG
Trigger: TCCAGCTGTGGTTCCAGAGCAGTGAGCTGTCCCCGA...GCGGCCGGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTCAACGCCTTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGGCTGGTGCGGGCATTaGAGGCGGCGGCTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAGWCGH*RRRLTF
Trigger: AAAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCGGTGTGTCCAATCATaGCCCTCGAGGCGCGGACGA +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARCVQS*PSRRGR
Trigger: TCGTCCGCGCCTCGAGGGCCATGATTGGACACACCG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GCCTGGTCCACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATAGAGAGAACGGAGTCGCTGGCGTaGATGACATTCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: AWSTAAMTAGGARTSIERTESLA*MTFLLM
Trigger: CATCAGCAGGAATGTCATCCACGCCAGCGACTCCGT...TCTCTCTATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGTGGACCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCACTCTGGAACCACAGCTaGATCTCCCGCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRALWNHS*ISRWAP
Trigger: GGGGGCCCAGCGGGAGATCCAGCTGTGGTTCCAGAG...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCATGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGCTGACGGAGGTAGTTaGTCCTGCGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAADGGS*SCVGDG
Trigger: CCCATCCCCCACGCAGGACCAACTACCTCCGTCAGC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGGCTGACGGAGGTAGTTaGTCCTGCGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQADGGS*SCVGDG
Trigger: CCCATCCCCCACGCAGGACCAACTACCTCCGTCAGC...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGGGAGCCCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGGSPEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGGGCTCCC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000382940.8
CDS-3UTR CCA 90 bp ACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATAGAGAGAGGGAGGCAGCTGGCAATCACCGTATaGCAGCCGTGCCGCATGAAA +
Preference number: 4 (lower is better)
Translates to: TAAMTAGGARTSIERGRQLAITV*QPCRMK
Trigger: TTTCATGCGGCACGGCTGCCATACGGTGATTGCCAG...CTGCCTCCCTCTCTCTATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGGGGACGCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGGDAEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGCGTCCCC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCGCCTTGTGTAGCCTaGGGCTCTGCTGCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAAPCVA*GSAAAG
Trigger: ACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCCTCCAATGGAGGGTaGAATTCCCACGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPSNGG*NSHVSP
Trigger: GGGGCTCACGTGGGAATTTCACCCTCCATTGGAGGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR TCA 90 bp CCGGCCGCACAGTTAATGAGAATGTCGATTCTGCCAAACTCCTTCAGAGCCTGGGGTCCACGGCGGCCATaGCAGCTGGGGGCGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PAAQLMRMSILPNSFRAWGPRRP*QLGALG
Trigger: TCCGAGCGCCCCCAGCTGTCATGGCCGCCGTGGACC...CCAGGCTCTGAAGGAGTTTGGCAGAATCGACATTCTCATTAACTGTGCGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR GCA 90 bp CCCTTATGGTTCCTGGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCATGGCCCGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PLWFLGQPQPSRCVQSWPGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...GGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGCCCTCCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLGPPEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGGAGGGCC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219479.7
ENST00000433358.5
ENST00000621774.4
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCACGGTGTGTCCAATCATaGCCCTCGAGGCGCGGACGA +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRARCVQS*PSRRGR
Trigger: TCGTCCGCGCCTCGAGGGCCATGATTGGACACACCG...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CACGGTCTTGAAGGCGTTGAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: HGLEGVEGQGASGAQEVPTPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...GGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTCAACGCCTTCAAGACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAATPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp ACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGAGCAATGTGAGGTGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TESLAWMTFLCQDRSNVRWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...CCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGTCCTGCGTGGGGGATaGGGTGGTAAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAVLRGG*GGKGSL
Trigger: CAAGCTGCCCTTACCACCCCATCCCCCACGCAGGAC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGCCAGCCGTCCTCCTCTaGAGGGGACGCCGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGPAVLL*RGRRAV
Trigger: CACGGCTCGGCGTCCCCTCCAGAGGAGGACGGCTGG...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCGATGGAGGGAGCCCTaGGACATGGATCGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARWREP*DMDRPV
Trigger: CACAGGACGATCCATGTCCCAGGGCTCCCTCCATCG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGTCGCTGGCGTGGATaGCATTCCTGTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAASRWRG*HSCART
Trigger: TGTCCTGGCACAGGAATGTCATCCACGCCAGCGACT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR GCA 90 bp AGACGGGGCCTGTGCTGCTGTGGAGTTTCAAGGCCTGTCGCTTCCAGACCCAGGACGCTCTCTGGTGCCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: RRGLCCCGVSRPVASRPRTLSGA*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGCACCAGAGAGCGT...CCTGGGTCTGGAAGCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGAGACGGGGCCTGTGCTaGTGTGGAGTTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQRRGLC*CGVSRP
Trigger: AGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCCCAAAACCCAGTTTaGAGGGCGCCTTGTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPQNPV*RAPCVA
Trigger: GGCTACACAAGGCGCCCTGCAAACTGGGTTTTGGGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCTATAGTCCCAGGCTaGTCCAGAGCCAAGCTACCC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPIVPG*SRAKLP
Trigger: GGGTAGCTTGGCTCTGGAGCAGCCTGGGACTATAGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CCA 90 bp GCCGCACAGTTAATGAGAATGTCGATTCTGCCAAACTCCTTCAGAGCCTGGTCCGGCCCTCCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AAQLMRMSILPNSFRAWSGPPEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGGAGGGCC...GGACCAGGCTCTGAAGGAGTTTGGCAGAATCGACATTCTCATTAACTGTGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRATPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGSWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp ACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGAGCAATGTGAGGGCTGACGGAGGTAGTTaGTCCTGCGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TESLAWMTFLCQDRSNVRADGGS*SCVGDG
Trigger: CCCATCCCCCACGCAGGACCAACTACCTCCGTCAGC...CCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CCA 90 bp TGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGTGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: WAPSTESLAWMTFLCQDRWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...CCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCATCTTTTCAGAGCCGATaGAGGGAGCCCCGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRASFQSR*REPRAV
Trigger: CACGGCTCGGGGCTCCCTCCATCGGCTCTGAAAAGA...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000382940.8
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTACGGAGTCGCTGGCGTaGATGACATTCCTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAATESLA*MTFLCQ
Trigger: CTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGGACAGGAGCAATGTaGGGCTCAGGCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARTGAM*GSGFMC
Trigger: GCACATGAAGCCTGAGCCTCACATTGCTCCTGTCCT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR TCA 90 bp GAGACCAGCCTGGTCAACGTGGTGAAAACCCATCTCGTCAGCACTCGCGGCAGGGGCAGCCGTGCCGCATaGAAATCTCAGCAATCCGGA +
Preference number: 4 (lower is better)
Translates to: ETSLVNVVKTHLVSTRGRGSRAA*KSQQSG
Trigger: TCCGGATTGCTGAGATTTTCATGCGGCACGGCTGCC...CCTGCCGCGAGTGCTGACGAGATGGGTTTTCACCACGTTGACCAGGCTGGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR TCA 90 bp GAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCGGCCGCACAGTTAATGAGGCACACGAGACACATTaGAGGTGCCGCTGGTATCGA +
Preference number: 4 (lower is better)
Translates to: EGQGASGAQEVPGRTVNEAHETH*RCRWYR
Trigger: TCGATACCAGCGGCACCTTCAATGTGTCTCGTGTGC...CTCATTAACTGTGCGGCCGGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGCCAACGAGCCGCCGTTaGACGCCATCGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGPTSRR*TPSGFT
Trigger: GGTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGG...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAACGCTCTCTGGTGCCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRATLSGA*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGCACCAGAGAGCGT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAAGGACGCTCTCTGGTaGCTGCAGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAKDALW*LQHLHP
Trigger: GGGATGAAGATGCTGCAGGCACCAGAGAGCGTCCTT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGTGGATGCTGCTGTaGTGGCCCCCGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLGWMLL*WPPSAQ
Trigger: CTGGGCAGACGGGGGCCAGCACAGCAGCATCCACCC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAGGCTGGGTGGATGCTaGTGTGCTGGCCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGRLGGC*CAGPRL
Trigger: CAGACGGGGGCCAGCACAGCAGCATCCACCCAGCCT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp ACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGAGCAATGTGAGGATCCCAGGGACCATCTaGTGCTCCCGTTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TESLAWMTFLCQDRSNVRIPGTI*CSRCPL
Trigger: CAGAGGGCAACGGGAGCAGCAGATGGTCCCTGGGAT...CCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CCA 90 bp CCCTTATGGTTCCTGGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCATGGCCCACGGAGTCGCTGGCGTaGATGACATTCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: PLWFLGQPQPSRCVQSWPTESLA*MTFLLM
Trigger: CATCAGCAGGAATGTCATCCACGCCAGCGACTCCGT...GGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGCTCTGGAACCACAGCTaGATCTCCCGCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGLWNHS*ISRWAP
Trigger: GGGGGCCCAGCGGGAGATCCAGCTGTGGTTCCAGAG...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGTGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: WAPSTESLAWMTFLCQDRGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...CCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCACCAGGTGAGCCCTaGAAACACGGACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPPGEP*KHGQKG
Trigger: CCCTTTTTGTCCGTGTTTCCAGGGCTCACCTGGTGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR CCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTACTTTTCAGAGCCGATaGAGGGAGCCCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAATFQSR*REPWDM
Trigger: CATGTCCCAGGGCTCCCTCCATCGGCTCTGAAAAGT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR TCA 90 bp GTCAACGTGGTGAAAACCCATCTCGTCAGCACTCGCGGCAGGCTCCTACTGGCAAGCTCATGTAGCGGATaGGGGCAGGGTAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VNVVKTHLVSTRGRLLLASSCSG*GQGRRA
Trigger: AGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCT...TGCCAGTAGGAGCCTGCCGCGAGTGCTGACGAGATGGGTTTTCACCACGTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR TCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGGTGAAATTCCCACGTaGGCCCCAGGGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGGEIPT*APGREK
Trigger: CTTCTCCCGCCCTGGGGCTCACGTGGGAATTTCACC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAAAGGACGCTCTCTGGTaGCTGCAGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAKDALW*LQHLHP
Trigger: GGGATGAAGATGCTGCAGGCACCAGAGAGCGTCCTT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGTGCTGGCCCCCGTCTaGCCAGCTCACCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLVLAPV*PAHQLT
Trigger: AGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCAC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAGGCTGGGTGGATGCTaGTGTGCTGGCCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLRLGGC*CAGPRL
Trigger: CAGACGGGGGCCAGCACAGCAGCATCCACCCAGCCT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAACGGAGTCGCTGGCGTaGATGACATTCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRATESLA*MTFLLM
Trigger: CATCAGCAGGAATGTCATCCACGCCAGCGACTCCGT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000448828.5
ENST00000450036.1
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGCTCTGGAACCACAGCTaGATCTCCCGCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLLWNHS*ISRWAP
Trigger: GGGGGCCCAGCGGGAGATCCAGCTGTGGTTCCAGAG...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp ACGAGACACATTGAAGGTGCCGCTGGTATCGATGTCCATCACGGTCTTGAAGGCCTCTGGAACCACAGCTaGATCTCCCGCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TRHIEGAAGIDVHHGLEGLWNHS*ISRWAP
Trigger: GGGGGCCCAGCGGGAGATCCAGCTGTGGTTCCAGAG...GCCTTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAATGTGTCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGATTCTGGCCTAACTTaGCCTTCAGCGAACGCCCCA +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRADSGLT*PSANAP
Trigger: TGGGGCGTTCGCTGAAGGCCAAGTTAGGCCAGAATC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGGGAGGAAGACCCCCTaGTTGGTTTGTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAGRKTP*LVCSPK
Trigger: TTTGGGGGAACAAACCAACCAGGGGGTCTTCCTCCC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTGGACAAAAAGGGGCCTaGAGATTGAAGAGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAGQKGA*RLKREG
Trigger: ACCTTCCCTCTTCAATCTTCAGGCCCCTTTTTGTCC...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGCGGTGTGTCCAATCATaGCCCTCGAGGCGCGGACGA +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLRCVQS*PSRRGR
Trigger: TCGTCCGCGCCTCGAGGGCCATGATTGGACACACCG...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp ACGAGACACATTGAAGGTGCCGCTGGTATCGATGTCCATCACGGTCTTGAAGGCCGGTGTGTCCAATCATaGCCCTCGAGGCGCGGACGA +
Preference number: 4 (lower is better)
Translates to: TRHIEGAAGIDVHHGLEGRCVQS*PSRRGR
Trigger: TCGTCCGCGCCTCGAGGGCCATGATTGGACACACCG...GCCTTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAATGTGTCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGTPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGCTGACGGAGGTAGTTaGTCCTGCGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLADGGS*SCVGDG
Trigger: CCCATCCCCCACGCAGGACCAACTACCTCCGTCAGC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGTCCCAGTCAGATTCTaGCCTAACTTGGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAVPVRF*PNLAFS
Trigger: GCTGAAGGCCAAGTTAGGCCAGAATCTGACTGGGAC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAATGTCCCACAGAATCTaGACAGAGCCAAAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAMSHRI*TEPKGL
Trigger: GAGCCCCTTTGGCTCTGTCCAGATTCTGTGGGACAT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR TCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAGCTCATGTAGCGGATaGGGGCAGGGTAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGSSCSG*GQGRRA
Trigger: AGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
CDS-3UTR TCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTATGTGCTGGGCACAGTaGATTTTAATGCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAMCWAQ*ILMPPL
Trigger: AAGGGGAGGCATTAAAATTCACTGTGCCCAGCACAT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR TCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAGGGGAGCAAGCCTGTaGCTGCTGATGTGGACGCTG +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLRGASL*LLMWTL
Trigger: CAGCGTCCACATCAGCAGTCACAGGCTTGCTCCCCT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR TCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGCTTCATGTGCACCCTaGGGAATCCCAGGGACCATC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGASCAP*GIPGTI
Trigger: GATGGTCCCTGGGATTCCTCAGGGTGCACATGAAGC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGACGCTCTCTGGTGCCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGTLSGA*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGCACCAGAGAGCGT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAGGTAGTTGGTCCTaGGTGGGGGATGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLGGSWS*VGDGVV
Trigger: TACCACCCCATCCCCCACGCAGGACCAACTACCTCC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGCCAGGGACCATCTGCTaGTCCCGTTGCCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLPGTIC*SRCPLS
Trigger: AGACAGAGGGCAACGGGAGCAGCAGATGGTCCCTGG...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCATGGATGACATTCCTGTaGCAGGACAGGAGCAATGTG +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAWMTFL*QDRSNV
Trigger: CACATTGCTCCTGTCCTGGCACAGGAATGTCATCCA...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CCA 90 bp CCCTTATGGTTCCTGGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCATGGCCCGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: PLWFLGQPQPSRCVQSWPEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...GGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp AAGGTGCCGCTGGTATCGATGTCCATCACGGTCTTGAAGGCGTTGAAGGACAAGGCGGCAGGCTCCTACTaGCAATCACCGTATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KVPLVSMSITVLKALKDKAAGSY*QSPYGS
Trigger: GCTGCCATACGGTGATTGCCAGTAGGAGCCTGCCGC...CTTGTCCTTCAACGCCTTCAAGACCGTGATGGACATCGATACCAGCGGCACCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGCCTGTGCTGCTGTaGAGTTTCAAGGCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLGPVLL*SFKACR
Trigger: GCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR TCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAGCTCATGTAGCGGATaGGGGCAGGGTAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLSSCSG*GQGRRA
Trigger: AGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGACGCTCTCTGGTGCCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLTLSGA*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGCACCAGAGAGCGT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
CDS-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAAGGACGCTCTCTGGTaGCTGCAGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGKDALW*LQHLHP
Trigger: GGGATGAAGATGCTGCAGGCACCAGAGAGCGTCCTT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTATTGGTCCAATCTTGTaGTGGCTTGGGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAIGPIL*WLGVQK
Trigger: TTTCTGTACCCCAAGCCAGCACAAGATTGGACCAAT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CCCTTATGGTTCCTGGGGCAGCCTCAGCCGAGTCGGTGTGTCCAATCATGGCCCTGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: PLWFLGQPQPSRCVQSWPCPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...GGGCCATGATTGGACACACCGACTCGGCTGAGGCTGCCCCAGGAACCATAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGCCACCAGGTGAGCCCTaGAAACACGGACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGPPGEP*KHGQKG
Trigger: CCCTTTTTGTCCGTGTTTCCAGGGCTCACCTGGTGG...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448828.5
ENST00000620944.4
CDS-3UTR TCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCACCCAGGGTCAGCGCTaGGCTCCGCCCCAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTTQGQR*APPQPS
Trigger: GGACGGCTGGGGCGGAGCTCAGCGCTGACCCTGGGT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620944.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAAGGACGCTCTCTGGTaGCTGCAGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLKDALW*LQHLHP
Trigger: GGGATGAAGATGCTGCAGGCACCAGAGAGCGTCCTT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
CDS-3UTR GCA 90 bp ACGAGACACATTGAAGGTGCCGCTGGTATCGATGTCCATCACGGTCTTGAAGGCAAGGACGCTCTCTGGTaGCTGCAGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: TRHIEGAAGIDVHHGLEGKDALW*LQHLHP
Trigger: GGGATGAAGATGCTGCAGGCACCAGAGAGCGTCCTT...GCCTTCAAGACCGTGATGGACATCGATACCAGCGGCACCTTCAATGTGTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAATTGGTCCAATCTTGTaGTGGCTTGGGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAIGPIL*WLGVQK
Trigger: TTTCTGTACCCCAAGCCAGCACAAGATTGGACCAAT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCATGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: VLADGGSWSCVGDGVVRACPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGGCCCTCCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEGPPEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGGAGGGCC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219479.7
ENST00000621774.4
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGTGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGCTGAGCCCCCTCCAATaGAGGGTGAAATTCCCACGT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLLSPLQ*RVKFPR
Trigger: ACGTGGGAATTTCACCCTCCATTGGAGGGGGCTCAG...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGTGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTGGGGACGCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPGDAEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGCGTCCCC...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620944.4
CDS-3UTR TCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGATGTGCTGGGCACAGTaGATTTTAATGCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGMCWAQ*ILMPPL
Trigger: AAGGGGAGGCATTAAAATTCACTGTGCCCAGCACAT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCAACTCCTTACAACTTaGATAAAGGCGTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAQLLTT*IKASFL
Trigger: TAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGCAACTCCTTACAACTTaGATAAAGGCGTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQQLLTT*IKASFL
Trigger: TAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTG...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTGGCCCTCCCGAGCCGTaGCGCACTAGCAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFGPPEP*RTSRLG
Trigger: CCCGAGCCTGCTAGTGCGCCACGGCTCGGGAGGGCC...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219479.7
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTSWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGGAACAGGGAAGTAAGTaGTTTGGGACAGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGEQGSK*FGTGRF
Trigger: AAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTC...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR TCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGATGTGCTGGGCACAGTaGATTTTAATGCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLMCWAQ*ILMPPL
Trigger: AAGGGGAGGCATTAAAATTCACTGTGCCCAGCACAT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGATTGGTCCAATCTTGTaGTGGCTTGGGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGIGPIL*WLGVQK
Trigger: TTTCTGTACCCCAAGCCAGCACAAGATTGGACCAAT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGTGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGCPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPSWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGCTCTGGAACCACAGCTaGATCTCCCGCTGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSELWNHS*ISRWAP
Trigger: GGGGGCCCAGCGGGAGATCCAGCTGTGGTTCCAGAG...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGTGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR TCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGCTAGAAGCCCTGGTCTaGGCCCCCTCCAATGGAGGG +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSELEALV*APSNGG
Trigger: CCCTCCATTGGAGGGGGCTCAGACCAGGGCTTCTAG...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR TCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGGCAGGAGGATCGCGTaGGCCCAGGAGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEGRRIA*AQEIEA
Trigger: AGCCTCAATCTCCTGGGCTCACGCGATCCTCCTGCC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR GCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTGTGCTGGCCCCCGTCTaGCCAGCTCACCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPVLAPV*PAHQLT
Trigger: AGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCAC...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTGGGTGGATGCTGCTGTaGTGGCCCCCGTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISGWMLL*WPPSAQ
Trigger: CTGGGCAGACGGGGGCCAGCACAGCAGCATCCACCC...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGTGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLCPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTAGCTGGATCTCCCGCTaGGCCCCCTCCACGGAGTCG +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFSWISR*APSTES
Trigger: CGACTCCGTGGAGGGGGCCCAGCGGGAGATCCAGCT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTTGGATGCTGCTGTGCTaGCCCCCGTCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPWMLLC*PPSAQL
Trigger: GAGCTGGGCAGACGGGGGCCAGCACAGCAGCATCCA...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
3UTR CAA 72 bp GTCCGGCACTTTGGTGCAAAAAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAGAAAGGCACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: VRHFGAKRIGPI*CWLGVQKGTEV
Trigger: AACTTCAGTGCCTTTCTGTACCCCAAGCCAGCACAAGATTGGACCAATCCTTTTTGCACCAAAGTGCCGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTGTGCTGGCCCCCGTCTaGCCAGCTCACCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISVLAPV*PAHQLT
Trigger: AGTGAGCTGGTGAGCTGGGCAGACGGGGGCCAGCAC...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTAGGCTGGGTGGATGCTaGTGTGCTGGCCCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFRLGGC*CAGPRL
Trigger: CAGACGGGGGCCAGCACAGCAGCATCCACCCAGCCT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTTPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTGCTGACGGAGGTAGTTaGTCCTGCGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPADGGS*SCVGDG
Trigger: CCCATCCCCCACGCAGGACCAACTACCTCCGTCAGC...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR TCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCAGATTGAGGCTGCAGTaGGCTGTGACTGCACCGCTG +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTRLRLQ*AVTAPL
Trigger: CAGCGGTGCAGTCACAGCTCACTGCAGCCTCAATCT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR GCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCACGCTCTCTGGTGCCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTTLSGA*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGCACCAGAGAGCGT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCGGTGTGTCCAATCATaGCCCTCGAGGCGCGGACGA +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFRCVQS*PSRRGR
Trigger: TCGTCCGCGCCTCGAGGGCCATGATTGGACACACCG...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGAAGGACGCTCTCTGGTaGCTGCAGCATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEKDALW*LQHLHP
Trigger: GGGATGAAGATGCTGCAGGCACCAGAGAGCGTCCTT...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
CDS-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGGCAAGGACGCTCTCTaGTGCCTGCAGCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEGKDAL*CLQHLH
Trigger: ATGAAGATGCTGCAGGCACCAGAGAGCGTCCTTGCC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
CDS-3UTR CCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISTPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTACCCCTTATGGTTCCTaGGGCAGCCTCAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFTPYGS*GSLSRV
Trigger: GACTCGGCTGAGGCTGCCCCAGGAACCATAAGGGGT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCACGGAGTCGCTGGCGTaGATGACATTCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTTESLA*MTFLLM
Trigger: CATCAGCAGGAATGTCATCCACGCCAGCGACTCCGT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR TCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTAGCTCATGTAGCGGATaGGGGCAGGGTAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFSSCSG*GQGRRA
Trigger: AGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
CDS-3UTR TCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTTCTTTCCCCACCAGGTaGGCCCTGGAAACACGGACA +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISSFPTR*ALETRT
Trigger: TGTCCGTGTTTCCAGGGCTCACCTGGTGGGGAAAGA...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620944.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTAGACGGGGCCTGTGCTaGTGTGGAGTTTCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISRRGLC*CGVSRP
Trigger: AGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCT...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620944.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTAGGAGACGGGGCCTGTaGTGCTGTGGAGTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISRRRGL*CCGVSR
Trigger: CCTTGAAACTCCACAGCAGCACAGGCCCCGTCTCCT...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620944.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTTACCCTTCCCAGACCTaGAGCATCTTCATCCCCACC +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISYPSQT*SIFIPT
Trigger: GGTGGGGATGAAGATGCTGCAGGTCTGGGAAGGGTA...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621774.4
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTACGGAGTCGCTGGCGTaGATGACATTCCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFTESLA*MTFLLM
Trigger: CATCAGCAGGAATGTCATCCACGCCAGCGACTCCGT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR TCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCATGTGCTGGGCACAGTaGATTTTAATGCCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTMCWAQ*ILMPPL
Trigger: AAGGGGAGGCATTAAAATTCACTGTGCCCAGCACAT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTTGGGACAGGCAGGTTTaGATGTGGGCTTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFWDRQV*MWAWVL
Trigger: AAGAACCCAAGCCCACATCCAAACCTGCCTGTCCCA...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTGGTTGTCCGGCACTTTaGTGCAAAAAGGATTGGTCC +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFGCPAL*CKKDWS
Trigger: GGACCAATCCTTTTTGCACCAAAGTGCCGGACAACC...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCGAATCCTTCTCGAATTaGATTCGTCTTTACACCGAC +
Preference number: 4 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTESFSN*IRLYTD
Trigger: GTCGGTGTAAAGACGAATGCAATTCGAGAAGGATTC...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS-3UTR GCA 90 bp CAAAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTATTGGTCCAATCTTGTaGTGGCTTGGGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: QNFLFTVQLLTTCIKASFIGPIL*WLGVQK
Trigger: TTTCTGTACCCCAAGCCAGCACAAGATTGGACCAAT...AAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTTGTCCGGCACTTTGGTaGAAAAAGGATTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISCPALW*KKDWSN
Trigger: ATTGGACCAATCCTTTTTGCACCAAAGTGCCGGACA...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGCAACTCCTTACAACTTaGATAAAGGCGTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEQLLTT*IKASFL
Trigger: TAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTG...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR GCA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTCAACTCCTTACAACTTaGATAAAGGCGTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISQLLTT*IKASFL
Trigger: TAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTG...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS TCA 90 bp CTGTGGAGTTTCAAGGCCTGTCGCTTCCAGACCCAGGGTCAGCGCTaGGCTCCGCCCCAGCCGTCCTCCTCTGGAGGGGACGCCGAGCCG +
Preference number: 5 (lower is better)
Translates to: LWSFKACRFQTQGQR*APPQPSSSGGDAEP
Trigger: CGGCTCGGCGTCCCCTCCAGAGGAGGACGGCTGGGGCGGAGCTCAGCGCTGACCCTGGGTCTGGAAGCGACAGGCCTTGAAACTCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000448828.5
ENST00000460297.1
ENST00000620944.4
CDS GCA 90 bp GGCGCCTTGTGTAGCCTGGGGCTCTGCTGCGGCTGGTGCGGGCATTaGAGGCGGCGGCTCACTTTTCAGAGCCGATGGAGGGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GALCSLGLCCGWCGH*RRRLTFQSRWREPW
Trigger: CCAGGGCTCCCTCCATCGGCTCTGAAAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CAA 90 bp ACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATAGAGAGAGGGAGGCAGCCCAACGAGCCGCCGTaGCACGCCATCGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: TAAMTAGGARTSIERGRQPNEPP*HAIGLH
Trigger: GTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGGG...CTGCCTCCCTCTCTCTATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CAA 90 bp TGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGCCCAACGAGCCGCCGTaGCACGCCATCGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: WAPSTESLAWMTFLCQDRPNEPP*HAIGLH
Trigger: GTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGGG...CCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS CCA 90 bp CCCAGTTTGCAGGGCGCCTTGTGTAGCCTGGGGCTCTGCTGCGGCTaGTGCGGGCATTGCAGGCGGCGGCTCACTTTTCAGAGCCGATGG +
Preference number: 5 (lower is better)
Translates to: PSLQGALCSLGLCCG*CGHCRRRLTFQSRW
Trigger: CCATCGGCTCTGAAAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCCCTGCAAACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CCA 90 bp GGCTGGTGCGGGCATTGCAGGCGGCGGCTCACTTTTCAGAGCCGATaGAGGGAGCCCTGGGACATGGATCGTCCTGTGAGGTGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GWCGHCRRRLTFQSR*REPWDMDRPVRWQL
Trigger: CAGCTGCCACCTCACAGGACGATCCATGTCCCAGGGCTCCCTCCATCGGCTCTGAAAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CCA 90 bp GGTTTGTTCCCCCAAAACCCAGTTTGCAGGGCGCCTTGTGTAGCCTaGGGCTCTGCTGCGGCTGGTGCGGGCATTGCAGGCGGCGGCTCA +
Preference number: 5 (lower is better)
Translates to: GLFPQNPVCRAPCVA*GSAAAGAGIAGGGS
Trigger: TGAGCCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCCCTGCAAACTGGGTTTTGGGGGAACAAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCGGCTGGTGCGGGCATaGCAGGCGGCGGCTCACTTT +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARLVRA*QAAAHF
Trigger: AAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCCG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS GCA 90 bp GGGTCCAGGAGGGCCCTCCTTCAAAAGGCAAGAGGTCAGAGGCACTaGCACCTCACCCTTTCACGTCCCCACGACCCGGGTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GSRRALLQKARGQRH*HLTLSRPHDPGFPA
Trigger: GGCTGGGAAACCCGGGTCGTGGGGACGTGAAAGGGTGAGGTGGCAGTGCCTCTGACCTCTTGCCTTTTGAAGGAGGGCCCTCCTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460297.1
ENST00000468031.1
CDS GCA 90 bp CGCTGGGCCCCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTaGCAGGACAGGAGCAATGTGAGGCTCAGGCTTCATGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: RWAPSTESLAWMTFL*QDRSNVRLRLHVHP
Trigger: AGGGTGCACATGAAGCCTGAGCCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGGGGCCCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS GCA 90 bp CAGCCAGAGCCCAGGGGTCACCAGGCTTCAGGGTGTCTGCCTCTATaGAGGGCACTCTGGAAGGGACAGGGATGGTGCCCACAGCCACAA +
Preference number: 5 (lower is better)
Translates to: QPEPRGHQASGCLPL*RALWKGQGWCPQPQ
Trigger: TTGTGGCTGTGGGCACCATCCCTGTCCCTTCCAGAGTGCCCTGCATAGAGGCAGACACCCTGAAGCCTGGTGACCCCTGGGCTCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460297.1
ENST00000468031.1
CDS-3UTR CAA 90 bp CACGGTCTTGAAGGCGTTGAAGGACAAGGCGCCAGCGGGGCACAGGAAGTTCCCGTGATGAAGGCCACTTaGTCCCGCAGCAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: HGLEGVEGQGASGAQEVPVMKAT*SRSRSG
Trigger: CCCGGACCTGCTGCGGGACAAAGTGGCCTTCATCAC...GGGAACTTCCTGTGCCCCGCTGGCGCCTTGTCCTTCAACGCCTTCAAGACCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CAA 90 bp CACGGCGGCCATGACAGCTGGGGGCGCTCGGACGTCCATAGAGAGAGGGAGGCAAGCACACGAGACACATaGAAGGTGCCGCTGGTATCG +
Preference number: 5 (lower is better)
Translates to: HGGHDSWGRSDVHREREASTRDT*KVPLVS
Trigger: CGATACCAGCGGCACCTTCAATGTGTCTCGTGTGCT...TGCCTCCCTCTCTCTATGGACGTCCGAGCGCCCCCAGCTGTCATGGCCGCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGTTTGCAGGGCGCCTaGTGTAGCCTGGGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAASLQGA*CSLGLC
Trigger: GCAGAGCCCCAGGCTACACAAGGCGCCCTGCAAACT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCCCCAAAACCCAGTTaGCAGGGCGCCTTGTGTAGC +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPPKPS*QGALCS
Trigger: GCTACACAAGGCGCCCTGCAAACTGGGTTTTGGGGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGCCCAACGAGCCGCCGTaGCACGCCATCGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLPNEPP*HAIGLH
Trigger: GTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGGG...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCACCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAAGATTCTGGCCTAACTaGGCCTTCAGCGAACGCCCC +
Preference number: 5 (lower is better)
Translates to: VLADGGSWSCVGDGVVRARFWPN*AFSERP
Trigger: GGGGCGTTCGCTGAAGGCCAAGTTAGGCCAGAATCT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS TCA 90 bp CTCCAGGTGAGCCCTGGAAACACGGACAAAAAGGGGCCTGAAGATTaGAGAGGGAAGGTAGCAGGGTTCTGTCCGAGCCAGGAGACGGGG +
Preference number: 5 (lower is better)
Translates to: LQVSPGNTDKKGPED*RGKVAGFCPSQETG
Trigger: CCCCGTCTCCTGGCTCGGACAGAACCCTGCTACCTTCCCTCTTCAATCTTCAGGCCCCTTTTTGTCCGTGTTTCCAGGGCTCACCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454619.5
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp ACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGAGCAATGTGAGGCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: TESLAWMTFLCQDRSNVRPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...CCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAAREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: VLADGGSWSCVGDGVVRARIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAGCTAGGTTGTCCGGCACTTaGGTGCAAAAAGGATTGGTC +
Preference number: 5 (lower is better)
Translates to: LADGGSWSCVGDGVVRAARLSGT*VQKGLV
Trigger: GACCAATCCTTTTTGCACCAAAGTGCCGGACAACCT...AGCTGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GTTCTTGCTGACGGAGGTAGTTGGTCCTGCGTGGGGGATGGGGTGGTAAGGGCAAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: VLADGGSWSCVGDGVVRAREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...TGCCCTTACCACCCCATCCCCCACGCAGGACCAACTACCTCCGTCAGCAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CCGGCCGCACAGTTAATGAGAATGTCGATTCTGCCAAACTCCTTCAGAGCCTGGACGGTCTTGAAGGCGTaGAAGGACAAGGCGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PAAQLMRMSILPNSFRAWTVLKA*KDKAPA
Trigger: CGCTGGCGCCTTGTCCTTCAACGCCTTCAAGACCGT...CCAGGCTCTGAAGGAGTTTGGCAGAATCGACATTCTCATTAACTGTGCGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS-3UTR CAA 90 bp ACGGAGTCGCTGGCGTGGATGACATTCCTGTGCCAGGACAGGAGCAATGTGAGGAGGTTGTCCGGCACTTaGGTGCAAAAAGGATTGGTC +
Preference number: 5 (lower is better)
Translates to: TESLAWMTFLCQDRSNVRRLSGT*VQKGLV
Trigger: GACCAATCCTTTTTGCACCAAAGTGCCGGACAACCT...CCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS-3UTR CAA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GTCAACGTGGTGAAAACCCATCTCGTCAGCACTCGCGGCAGGCTCCTACTGGCAATGTCCATCACGGTCTaGAAGGCGTTGAAGGACAAG +
Preference number: 5 (lower is better)
Translates to: VNVVKTHLVSTRGRLLLAMSITV*KALKDK
Trigger: CTTGTCCTTCAACGCCTTCAAGACCGTGATGGACAT...TGCCAGTAGGAGCCTGCCGCGAGTGCTGACGAGATGGGTTTTCACCACGTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS TCA 90 bp ACTTTCCACATGAGGAAGAACCCAGAGCCCACCCTGTGTCTGAGGTaGATGAGTGGCAGGGAACCAGGGAGAAACACACTTTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: TFHMRKNPEPTLCLR*MSGREPGRNTLSPP
Trigger: TGGTGGGGAAAGTGTGTTTCTCCCTGGTTCCCTGCCACTCATTCACCTCAGACACAGGGTGGGCTCTGGGTTCTTCCTCATGTGGAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460297.1
CDS-3UTR CAA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGRIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000219479.7
ENST00000382940.8
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GAGGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: EVNREVSGLGQAGLDVGLRIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...CAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000433358.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp AGGCCCAGAGCTCATGTAGCGGATGAGGGCAGGGTAGAAGGGCTTCCTCCGCAGTCAACTCCTTACAACTaGCATAAAGGCGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: RPRAHVADEGRVEGLPPQSTPYN*HKGVIS
Trigger: AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGA...CTGCGGAGGAAGCCCTTCTACCCTGCCCTCATCCGCTACATGAGCTCTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448828.5
CDS-3UTR CAA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCCCCAACGAGCCGCCGTaGCACGCCATCGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTPNEPP*HAIGLH
Trigger: GTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGGG...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGCCCAACGAGCCGCCGTaGCACGCCATCGGGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEPNEPP*HAIGLH
Trigger: GTGAAGCCCGATGGCGTGCAACGGCGGCTCGTTGGG...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp GGTGAACAGGGAAGTAAGTGGTTTGGGACAGGCAGGTTTGGATGTGGGCTTGGGTCAACTCCTTACAACTaGCATAAAGGCGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: GEQGSKWFGTGRFGCGLGSTPYN*HKGVIS
Trigger: AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGA...CCCAAGCCCACATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCTGTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000448828.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGCCCCCACCACAAAGGTaGTCCGGCACTTTGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEPPPQR*SGTLVQ
Trigger: TTGCACCAAAGTGCCGGACAACCTTTGTGGTGGGGG...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAGAGAGGGAAGTAAGTGGTTaGGGACAGGCAGGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: LYCSTPYNLHKGVISTSEREVSG*GQAGLD
Trigger: ATCCAAACCTGCCTGTCCCAAACCACTTACTTCCCT...CTCTGAGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp TTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTAGGATTGGTCCAATCTaGTGCTGGCTTGGGGTACAG +
Preference number: 5 (lower is better)
Translates to: FLFTVQLLTTCIKASFLPRIGPI*CWLGVQ
Trigger: CTGTACCCCAAGCCAGCACAAGATTGGACCAATCCT...AGGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCAGGTTGTCCGGCACTTaGGTGCAAAAAGGATTGGTC +
Preference number: 5 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTRLSGT*VQKGLV
Trigger: GACCAATCCTTTTTGCACCAAAGTGCCGGACAACCT...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp CTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTACCTCAACTCCTTACAACTaGCATAAAGGCGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: LPLYCSTPYNLHKGVISTSTPYN*HKGVIS
Trigger: AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGA...GGTAGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS-3UTR CAA 90 bp AAACTTCCTCTTTACTGTTCAACTCCTTACAACTTGCATAAAGGCGTCATTTCTTCAACTCCTTACAACTaGCATAAAGGCGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: KLPLYCSTPYNLHKGVISSTPYN*HKGVIS
Trigger: AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGA...AGAAATGACGCCTTTATGCAAGTTGTAAGGAGTTGAACAGTAAAGAGGAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219479.7
ENST00000397722.5
ENST00000620944.4
ENST00000621774.4
CDS CCA 72 bp GGGAGACAGTCGTCCCCCTCCACGTCGGGCGGCGGCTaGGCCATGGCGCTCCCGTCGGGGACAGCTCACTGC +
Preference number: 6 (lower is better)
Translates to: GRQSSPSTSGGG*AMALPSGTAHC
Trigger: GCAGTGAGCTGTCCCCGACGGGAGCGCCATGGCCCAGCCGCCGCCCGACGTGGAGGGGGACGACTGTCTCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS CCA 72 bp AGTCGTCCCCCTCCACGTCGGGCGGCGGCTGGGCCATaGCGCTCCCGTCGGGGACAGCTCACTGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SRPPPRRAAAGP*RSRRGQLTALE
Trigger: TTCCAGAGCAGTGAGCTGTCCCCGACGGGAGCGCCATGGCCCAGCCGCCGCCCGACGTGGAGGGGGACGACT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444498.5
CDS GCA 72 bp CCCAGTTTGCAGGGCGCCTTGTGTAGCCTGGGGCTCTaGTGCGGCTGGTGCGGGCATTGCAGGCGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: PSLQGALCSLGL*CGWCGHCRRRL
Trigger: GAGCCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCCCTGCAAACTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CCA 72 bp CAGGGCGCCTTGTGTAGCCTGGGGCTCTGCTGCGGCTaGTGCGGGCATTGCAGGCGGCGGCTCACTTTTCAG +
Preference number: 6 (lower is better)
Translates to: QGALCSLGLCCG*CGHCRRRLTFQ
Trigger: CTGAAAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS GCA 72 bp TGTAGCCTGGGGCTCTGCTGCGGCTGGTGCGGGCATTaGAGGCGGCGGCTCACTTTTCAGAGCCGATGGAGG +
Preference number: 6 (lower is better)
Translates to: CSLGLCCGWCGH*RRRLTFQSRWR
Trigger: CCTCCATCGGCTCTGAAAAGTGAGCCGCCGCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS GCA 72 bp GGGTCCAGGAGGGCCCTCCTTCCTATAGTCCCAGGCTaGTCCAGAGCCAAGCTACCCTCCGGCATCGGGTCC +
Preference number: 6 (lower is better)
Translates to: GSRRALLPIVPG*SRAKLPSGIGS
Trigger: GGACCCGATGCCGGAGGGTAGCTTGGCTCTGGAGCAGCCTGGGACTATAGGAAGGAGGGCCCTCCTGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS GCA 72 bp CATGGGCAGCACCCCCACCGCAGAATAGATCCCTCCTaGCCCTTCAACTGCCAAAGCCAGGCCCTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: HGQHPHRRIDPS*PFNCQSQALPR
Trigger: CCGGGGCAGGGCCTGGCTTTGGCAGTTGAAGGGGCAGGAGGGATCTATTCTGCGGTGGGGGTGCTGCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468031.1
CDS CCA 72 bp TGGGGCCTGACGTCCCAGTCAGATTCTGGCCTAACTTaGCCTTCAGCGAACGCCCCAGCGGAGCGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: WGLTSQSDSGLT*PSANAPAERLP
Trigger: GGGGAGCCGCTCCGCTGGGGCGTTCGCTGAAGGCCAAGTTAGGCCAGAATCTGACTGGGACGTCAGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CCA 72 bp CCCCAAAACCCAGTTTGCAGGGCGCCTTGTGTAGCCTaGGGCTCTGCTGCGGCTGGTGCGGGCATTGCAGGC +
Preference number: 6 (lower is better)
Translates to: PQNPVCRAPCVA*GSAAAGAGIAG
Trigger: GCCTGCAATGCCCGCACCAGCCGCAGCAGAGCCCCAGGCTACACAAGGCGCCCTGCAAACTGGGTTTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CAA 72 bp TTGGGGCCTGACGTCCCAGTCAGATTCTGGCCTAACTaGGCCTTCAGCGAACGCCCCAGCGGAGCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LGPDVPVRFWPN*AFSERPSGAAP
Trigger: GGGAGCCGCTCCGCTGGGGCGTTCGCTGAAGGCCAAGTTAGGCCAGAATCTGACTGGGACGTCAGGCCCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CCA 72 bp AGGAGGTCTAGAAGCCCTGGTCTGAGCCCCCTCCAATaGAGGGTGAAATTCCCACGTGAGCCCCAGGGCGGG +
Preference number: 6 (lower is better)
Translates to: RRSRSPGLSPLQ*RVKFPREPQGG
Trigger: CCCGCCCTGGGGCTCACGTGGGAATTTCACCCTCCATTGGAGGGGGCTCAGACCAGGGCTTCTAGACCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397722.5
CDS CCA 72 bp GGGCATTGCAGGCGGCGGCTCACTTTTCAGAGCCGATaGAGGGAGCCCTGGGACATGGATCGTCCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GHCRRRLTFQSR*REPWDMDRPVR
Trigger: CCTCACAGGACGATCCATGTCCCAGGGCTCCCTCCATCGGCTCTGAAAAGTGAGCCGCCGCCTGCAATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS CCA 72 bp CCAGAGGAGCCCAGACCCTGTATGTCCCACAGAATCTaGACAGAGCCAAAGGGGCTCCGCCAGGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PEEPRPCMSHRI*TEPKGLRQARR
Trigger: CCTCCTGGCCTGGCGGAGCCCCTTTGGCTCTGTCCAGATTCTGTGGGACATACAGGGTCTGGGCTCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450036.1
CDS TCA 72 bp GCTCGGCAAGGACGCTCTCTGGTGCCTGGGTGGCATTaGGGTAAGGAGGAGCCGCAGACAGTAAACGTGGGC +
Preference number: 6 (lower is better)
Translates to: ARQGRSLVPGWH*GKEEPQTVNVG
Trigger: GCCCACGTTTACTGTCTGCGGCTCCTCCTTACCTCAATGCCACCCAGGCACCAGAGAGCGTCCTTGCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468031.1
CDS GCA 72 bp AGGGCCCTCCTTCAAAAGGCAAGAGGTCAGAGGCACTaGCACCTCACCCTTTCACGTCCCCACGACCCGGGT +
Preference number: 6 (lower is better)
Translates to: RALLQKARGQRH*HLTLSRPHDPG
Trigger: ACCCGGGTCGTGGGGACGTGAAAGGGTGAGGTGGCAGTGCCTCTGACCTCTTGCCTTTTGAAGGAGGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460297.1
ENST00000468031.1
CDS CCA 72 bp TTCTGTCCGAGCCAGGAGACGGGGCCTGTGCTGCTGTaGAGTTTCAAGGCCTGTCGCTTCCAGACCCAGGGT +
Preference number: 6 (lower is better)
Translates to: FCPSQETGPVLL*SFKACRFQTQG
Trigger: ACCCTGGGTCTGGAAGCGACAGGCCTTGAAACTCCACAGCAGCACAGGCCCCGTCTCCTGGCTCGGACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000448828.5
ENST00000454619.5
ENST00000460297.1
ENST00000620944.4
CDS TCA 72 bp CAGGAGCAATGTGAGGCTCAGGCTTCATGTGCACCCTaGGGAATCCCAGGGACCATCTGCTGCTCCCGTTGC +
Preference number: 6 (lower is better)
Translates to: QEQCEAQASCAP*GIPGTICCSRC
Trigger: GCAACGGGAGCAGCAGATGGTCCCTGGGATTCCTCAGGGTGCACATGAAGCCTGAGCCTCACATTGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS GCA 72 bp CCCTCCACGGAGTCGCTGGCGTGGATGACATTCCTGTaGCAGGACAGGAGCAATGTGAGGCTCAGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: PSTESLAWMTFL*QDRSNVRLRLH
Trigger: ATGAAGCCTGAGCCTCACATTGCTCCTGTCCTGGCACAGGAATGTCATCCACGCCAGCGACTCCGTGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433358.5
CDS CAA 90 bp GGCCTCAGGGAAGTCTGGAGATCCTGCAAAACTCCAGCCTCACTTTaGACTCCATCCCTTCTGGATGACGACAGACATGGTCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: GLREVWRSCKTPASL*TPSLLDDDRHGLKP
Trigger: GGGCTTCAGACCATGTCTGTCGTCATCCAGAAGGGATGGAGTCAAAAGTGAGGCTGGAGTTTTGCAGGATCTCCAGACTTCCCTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460297.1
ENST00000468031.1
CDS TCA 72 bp AAGTCTGGAGATCCTGCAAAACTCCAGCCTCACTTTTaGCTCCATCCCTTCTGGATGACGACAGACATGGTC +
Preference number: 6 (lower is better)
Translates to: KSGDPAKLQPHF*LHPFWMTTDMV
Trigger: GACCATGTCTGTCGTCATCCAGAAGGGATGGAGTCAAAAGTGAGGCTGGAGTTTTGCAGGATCTCCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460297.1
ENST00000468031.1