Pregenerated sensors for NME2 (Homo sapiens)
Ensembl gene IDs: ENSG00000243678Ensembl transcript IDs: ENST00000393190.4, ENST00000485076.1, ENST00000513177.5, ENST00000514264.6, ENST00000573262.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTGGCTTCCCGGCCGCTTCCGCCCCGCGCAGGGCCGGCGTCCCTCTaGGGAGCCCGAAGGCCCGCGGGGCGCAAGCTGCAAGGGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: VASRPLPPRAGPASL*GARRPAGRKLQGNL Trigger: GAGATTCCCTTGCAGCTTGCGCCCCGCGGGCCTTCGGGCTCCGCAGAGGGACGCCGGCCCTGCGCGGGGCGGAAGCGGCCGGGAAGCCAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393190.4 |
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| CDS TCA 90 bp | GCCGTGGGCGGGGGCAGAGGGCAAAGGGATTTCGCGGCAGCGAAATaGACTCGGAAAGCAGACGCGGACAAACCGCCGCCGGGAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: AVGGGRGQRDFAAAK*TRKADADKPPPGGK Trigger: TTTCCCTCCCGGCGGCGGTTTGTCCGCGTCTGCTTTCCGAGTTCATTTCGCTGCCGCGAAATCCCTTTGCCCTCTGCCCCCGCCCACGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485076.1 |
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| CDS GCA 90 bp | GCGCTCCAGGTTGGCCATGGTCCTCTCCGCGCAAACCGGGAGCTTTaGTCAGCACCTCAAACGGCCATCTGGTCCTGCCTCTGCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALQVGHGPLRANREL*SAPQTAIWSCLCPA Trigger: GGCAGGGCAGAGGCAGGACCAGATGGCCGTTTGAGGTGCTGAGCAAAGCTCCCGGTTTGCGCGGAGAGGACCATGGCCAACCTGGAGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513177.5 |
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| CDS CCA 90 bp | AGTGTCCCTGGCAAACAAGCTCCCTTTGGTGATGCCCAGCTTCCCTaGGGCGGTCACAAGCCCCTCCTCTCGGCGCCTGCAGCACTGACT | + |
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Preference number: 5 (lower is better) Translates to: SVPGKQAPFGDAQLP*GGHKPLLSAPAALT Trigger: AGTCAGTGCTGCAGGCGCCGAGAGGAGGGGCTTGTGACCGCCCCAGGGAAGCTGGGCATCACCAAAGGGAGCTTGTTTGCCAGGGACACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514264.6 |
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| CDS TCA 90 bp | GACACTTCCTACTTGCAGTGTCCCTGGCAAACAAGCTCCCTTTGGTaGTGCCCAGCTTCCCTGGGGCGGTCACAAGCCCCTCCTCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: DTSYLQCPWQTSSLW*CPASLGRSQAPPLG Trigger: GCCGAGAGGAGGGGCTTGTGACCGCCCCAGGGAAGCTGGGCATCACCAAAGGGAGCTTGTTTGCCAGGGACACTGCAAGTAGGAAGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514264.6 |
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| CDS TCA 90 bp | AACATTTACTCCTACCTGACACGACACATCAATGAGACCGATCAGTaGCATGATTATCAGCTAACCCCAGCAGAGAGTAGGGGCCTATAT | + |
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Preference number: 5 (lower is better) Translates to: NIYSYLTRHINETDQ*HDYQLTPAESRGLY Trigger: ATATAGGCCCCTACTCTCTGCTGGGGTTAGCTGATAATCATGTCACTGATCGGTCTCATTGATGTGTCGTGTCAGGTAGGAGTAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573262.1 |
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| CDS TCA 90 bp | GATTCAAAGAAAAGTCTGTCCAACTTGGGGACTTCCCAGTTTAGCTaGGACAGAGATAAACAATGTTGCAGAATCCTTATGCAGCCATCA | + |
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Preference number: 5 (lower is better) Translates to: DSKKSLSNLGTSQFS*DRDKQCCRILMQPS Trigger: TGATGGCTGCATAAGGATTCTGCAACATTGTTTATCTCTGTCTCAGCTAAACTGGGAAGTCCCCAAGTTGGACAGACTTTTCTTTGAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573262.1 |
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| CDS CCA 90 bp | CATTCCAAACGTATTGCTAGGATTCAAAGAAAAGTCTGTCCAACTTaGGGACTTCCCAGTTTAGCTGAGACAGAGATAAACAATGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: HSKRIARIQRKVCPT*GLPSLAETEINNVA Trigger: TGCAACATTGTTTATCTCTGTCTCAGCTAAACTGGGAAGTCCCCAAGTTGGACAGACTTTTCTTTGAATCCTAGCAATACGTTTGGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573262.1 |
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| CDS CCA 72 bp | GGCAAACAAGCTCCCTTTGGTGATGCCCAGCTTCCCTaGGGCGGTCACAAGCCCCTCCTCTCGGCGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GKQAPFGDAQLP*GGHKPLLSAPA Trigger: TGCAGGCGCCGAGAGGAGGGGCTTGTGACCGCCCCAGGGAAGCTGGGCATCACCAAAGGGAGCTTGTTTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514264.6 |
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| CDS TCA 72 bp | GGGGGCAGAGGGCAAAGGGATTTCGCGGCAGCGAAATaGACTCGGAAAGCAGACGCGGACAAACCGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GGRGQRDFAAAK*TRKADADKPPP Trigger: CGGCGGCGGTTTGTCCGCGTCTGCTTTCCGAGTTCATTTCGCTGCCGCGAAATCCCTTTGCCCTCTGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485076.1 |
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| CDS GCA 72 bp | GTTGGCCATGGTCCTCTCCGCGCAAACCGGGAGCTTTaGTCAGCACCTCAAACGGCCATCTGGTCCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VGHGPLRANREL*SAPQTAIWSCL Trigger: GAGGCAGGACCAGATGGCCGTTTGAGGTGCTGAGCAAAGCTCCCGGTTTGCGCGGAGAGGACCATGGCCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513177.5 |
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| CDS CCA 72 bp | AACCGGGAGCTTTGCTCAGCACCTCAAACGGCCATCTaGTCCTGCCTCTGCCCTGCCTTGATGACTCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: NRELCSAPQTAI*SCLCPALMTPP Trigger: CGGGGGAGTCATCAAGGCAGGGCAGAGGCAGGACCAGATGGCCGTTTGAGGTGCTGAGCAAAGCTCCCGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513177.5 |
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| CDS TCA 72 bp | TACTTGCAGTGTCCCTGGCAAACAAGCTCCCTTTGGTaGTGCCCAGCTTCCCTGGGGCGGTCACAAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: YLQCPWQTSSLW*CPASLGRSQAP Trigger: AGGGGCTTGTGACCGCCCCAGGGAAGCTGGGCATCACCAAAGGGAGCTTGTTTGCCAGGGACACTGCAAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514264.6 |
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| CDS CAA 90 bp | TGTAGACACTTCCTACTTGCAGTGTCCCTGGCAAACAAGCTCCCTTaGGTGATGCCCAGCTTCCCTGGGGCGGTCACAAGCCCCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: CRHFLLAVSLANKLP*VMPSFPGAVTSPSS Trigger: AGAGGAGGGGCTTGTGACCGCCCCAGGGAAGCTGGGCATCACCAAAGGGAGCTTGTTTGCCAGGGACACTGCAAGTAGGAAGTGTCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514264.6 |
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| CDS CAA 72 bp | TTCCTACTTGCAGTGTCCCTGGCAAACAAGCTCCCTTaGGTGATGCCCAGCTTCCCTGGGGCGGTCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: FLLAVSLANKLP*VMPSFPGAVTS Trigger: GCTTGTGACCGCCCCAGGGAAGCTGGGCATCACCAAAGGGAGCTTGTTTGCCAGGGACACTGCAAGTAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514264.6 |
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| CDS CCA 72 bp | AGAAGAACTGGTGAAGAAAGGAGAAAGTGGCCAGTCTaGAATAGGATCAGTGGGAAGGGCATCCCAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RRTGEERRKWPV*NRISGKGIPED Trigger: GTCTTCTGGGATGCCCTTCCCACTGATCCTATTCCAGACTGGCCACTTTCTCCTTTCTTCACCAGTTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573262.1 |
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| CDS TCA 72 bp | AAAAGTCTGTCCAACTTGGGGACTTCCCAGTTTAGCTaGGACAGAGATAAACAATGTTGCAGAATCCTTATG | + |
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Preference number: 6 (lower is better) Translates to: KSLSNLGTSQFS*DRDKQCCRILM Trigger: CATAAGGATTCTGCAACATTGTTTATCTCTGTCTCAGCTAAACTGGGAAGTCCCCAAGTTGGACAGACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573262.1 |
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