Pregenerated sensors for NMD3 (Homo sapiens)
Ensembl gene IDs: ENSG00000169251Ensembl transcript IDs: ENST00000351193.7, ENST00000460469.1, ENST00000463518.5, ENST00000468606.5, ENST00000472947.5, ENST00000476237.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAACACAGACCACCAATGAGAACTTGCTTTGGTCAATCTTACCTTTaGAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: KHRPPMRTCFGQSYL*RTRTSHSYQATTKD Trigger: GTCTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATTGACCAAAGCAAGTTCTCATTGGTGGTCTGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| 3UTR TCA 90 bp | TGGGCTGGAAATAACATACCCAGTTATGTAAGGATTGACTCAATGTaGGCACATTTACTAAAATTAAAGAATCTAGGGAAAACTCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: WAGNNIPSYVRIDSM*AHLLKLKNLGKTLV Trigger: TACCAGAGTTTTCCCTAGATTCTTTAATTTTAGTAAATGTGCTCACATTGAGTCAATCCTTACATAACTGGGTATGTTATTTCCAGCCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| 3UTR-3UTR GCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGCCACACAGTGGCACTTaGTCAATCTCTTTATTTAGT | + |
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Preference number: 2 (lower is better) Translates to: NLTFEELGQAIPTRPPPKPHSGT*SISLFS Trigger: ACTAAATAAAGAGATTGAGCAAGTGCCACTGTGTGG...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| 3UTR-3UTR CCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAAATGTTCCACACAGTaGCACTTGCTCAATCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: NLTFEELGQAIPTRPPPKKCSTQ*HLLNLF Trigger: AAAGAGATTGAGCAAGTGCCACTGTGTGGAACATTT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| 3UTR-3UTR TCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGTCTGTTTTAGTGGTTTaGGTGAGCACTGAAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: NLTFEELGQAIPTRPPPKSVLVV*VSTENK Trigger: TTTGTTTTCAGTGCTCACTCAAACCACTAAAACAGA...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| 3UTR-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTTCTGGTACTAAGTACTaGCCAGGGAGGTATCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NLGKWYPGILATFCKSEISGTKY*PGRYLL Trigger: CAGGAGATACCTCCCTGGTCAGTACTTAGTACCAGA...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| 3UTR-3UTR CCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTACAGCTCAGAGCTTCTaGGTTCTACTATGGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: NLGKWYPGILATFCKSEITAQSF*VLLWQG Trigger: TCCTTGCCATAGTAGAACCCAGAAGCTCTGAGCTGT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| 3UTR-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTAAGCAACTCTACCCCTaGACTTTTCTTGCTCATCAG | + |
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Preference number: 2 (lower is better) Translates to: NLGKWYPGILATFCKSEIKQLYP*TFLAHQ Trigger: CTGATGAGCAAGAAAAGTTCAGGGGTAGAGTTGCTT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| 3UTR-3UTR CCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTTTCTGGGTTCTACTATaGCAAGGAATTAGCCTGATG | + |
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Preference number: 2 (lower is better) Translates to: NLGKWYPGILATFCKSEIFWVLL*QGISLM Trigger: CATCAGGCTAATTCCTTGCCATAGTAGAACCCAGAA...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| 3UTR-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTCAGTTATGTAAGGATTaGCTCAATGTGAGCACATTT | + |
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Preference number: 2 (lower is better) Translates to: NLGKWYPGILATFCKSEIQLCKD*LNVSTF Trigger: AAATGTGCTCACATTGAGTCAATCCTTACATAACTG...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR GCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAGATGTGTCCAGGGCTaGGGTCGGTGGATTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKRCVQG*GRWILP Trigger: TGGCAGAATCCACCGACCGCAGCCCTGGACACATCT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGTACGACGCTGACGTTTaGTCCGGTCATAGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKYDADV*SGHSSS Trigger: AGAAGAGCTATGACCGGACCAAACGTCAGCGTCGTA...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR GCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGCTCCATCGTTCTGTATaGCTTAAGTTTTCGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKLHRSV*LKFSRL Trigger: GAGGCGCGAAAACTTAAGGCATACAGAACGATGGAG...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTACTCCTGGCCTGAAGTaGTCTGCCCTCCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEITPGLK*SALLSL Trigger: GAGGCTGAGGAGGGCAGATCACTTCAGGCCAGGAGT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR CCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTCGTCAGCTGCCAACCTaGCTGTCTCCGCCACAGAGA | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIRQLPT*LSPPQR Trigger: TCTCTGTGGCGGAGACAGCCAGGTTGGCAGCTGACG...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR TCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGGCATCTTGGGAAATATaGAGGTCTTCAAGCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKASWEI*RSSSIS Trigger: TGAGATGCTTGAAGACCTTCATATTTCCCAAGATGC...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR TCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGGGTCAATCTTACCTTTaGAGAACTAGGACAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKGQSYL*RTRTSH Trigger: ATGGCTTGTCCTAGTTCTTCAAAGGTAAGATTGACC...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR TCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAACACAGACCACCAATaGGAACTTGCTTTGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKNTDHQ*ELALVN Trigger: ATTGACCAAAGCAAGTTCTCATTGGTGGTCTGTGTT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR GCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTAGATGTGTCCAGGGCTaGGGTCGGTGGATTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIRCVQG*GRWILP Trigger: TGGCAGAATCCACCGACCGCAGCCCTGGACACATCT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR GCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGCCACCAATGAGAACTTaGTTTGGTCAATCTTACCTT | + |
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Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKPPMRT*FGQSYL Trigger: AAGGTAAGATTGACCAAAGCAAGTTCTCATTGGTGG...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR GCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTTGGCCTGAAGTGATCTaGCCTCCTCAGCCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIWPEVI*PPQPPK Trigger: TTTGGGAGGCTGAGGAGGGCAGATCACTTCAGGCCA...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR TCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAAATCCAGACCATCATaGATCTCTTTGATACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKKSRPS*ISLIRS Trigger: ACTTCGTATCAAAGAGATTCATGATGGTCTGGATTT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTCACTTGGCCCCTCAGTaGCTTCTGACTCTAAATCAG | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIHLAPQ*LLTLNQ Trigger: CTGATTTAGAGTCAGAAGTCACTGAGGGGCCAAGTG...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR CCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTTACGACGCTGACGTTTaGTCCGGTCATAGCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIYDADV*SGHSSS Trigger: AGAAGAGCTATGACCGGACCAAACGTCAGCGTCGTA...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR CCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGACCAAAGACAGGATATaGCTTTTAGATCCACAATTT | + |
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Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKTKDRI*LLDPQF Trigger: AAATTGTGGATCTAAAAGCCATATCCTGTCTTTGGT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CCA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAATGAGAACTTGCTTTaGTCAATCTTACCTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NLTFEELGQAIPTRPPPKNENLL*SILPLK Trigger: CTTCAAAGGTAAGATTGACCAAAGCAAGTTCTCATT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR GCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTCTCCATCGTTCTGTATaGCTTAAGTTTTCGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEILHRSV*LKFSRL Trigger: GAGGCGCGAAAACTTAAGGCATACAGAACGATGGAG...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR GCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTATCAGCAGCTTCAGGTaGAGATTTGGCTTCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIISSFR*RFGFFT Trigger: GGTGAAGAAGCCAAATCTGCACCTGAAGCTGCTGAT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTGCATCTTGGGAAATATaGAGGTCTTCAAGCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIASWEI*RSSSIS Trigger: TGAGATGCTTGAAGACCTTCATATTTCCCAAGATGC...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR TCA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTAAATCCAGACCATCATaGATCTCTTTGATACGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NLGKWYPGILATFCKSEIKSRPS*ISLIRS Trigger: ACTTCGTATCAAAGAGATTCATGATGGTCTGGATTT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS CCA 90 bp | GGGCTCCAACCCTGGACGACCAAGGGCGAGGTCAGCTCGGGATTGTaGACGCCCGGGCCCTCCCGCTCTCCACCAGCCCAGGGACCGCAC | + |
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Preference number: 5 (lower is better) Translates to: GLQPWTTKGEVSSGL*TPGPSRSPPAQGPH Trigger: GTGCGGTCCCTGGGCTGGTGGAGAGCGGGAGGGCCCGGGCGTCCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000460469.1 ENST00000463518.5 ENST00000476237.5 |
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| CDS CCA 90 bp | CACCCAGCTCTGCCGCTGACCTCCATCTCACCTGGGCTCCAACCCTaGACGACCAAGGGCGAGGTCAGCTCGGGATTGTGGACGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: HPALPLTSISPGLQP*TTKGEVSSGLWTPG Trigger: CCCGGGCGTCCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGGTGAGATGGAGGTCAGCGGCAGAGCTGGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460469.1 |
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| CDS GCA 90 bp | CAGCCACCGTCAAATCCGGGTAGCGACCCGGGGCGTTTGCAGCGGTaGCGAGGAAGAGGACGGGAACGGTGTTACGGTATTGGTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QPPSNPGSDPGRLQR*RGRGRERCYGIGGP Trigger: GGGCCCACCAATACCGTAACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAACGCCCCGGGTCGCTACCCGGATTTGACGGTGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CCA 90 bp | AAGACCCTCGGGCCACCCAGCTCTGCCGCTGACCTCCATCTCACCTaGGCTCCAACCCTGGACGACCAAGGGCGAGGTCAGCTCGGGATT | + |
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Preference number: 5 (lower is better) Translates to: KTLGPPSSAADLHLT*APTLDDQGRGQLGI Trigger: AATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGGTGAGATGGAGGTCAGCGGCAGAGCTGGGTGGCCCGAGGGTCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460469.1 |
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| CDS GCA 90 bp | TGCCGCTCCAGCCACCGTCAAATCCGGGTAGCGACCCGGGGCGTTTaGAGCGGTGCCGAGGAAGAGGACGGGAACGGTGTTACGGTATTG | + |
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Preference number: 5 (lower is better) Translates to: CRSSHRQIRVATRGV*SGAEEEDGNGVTVL Trigger: CAATACCGTAACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAACGCCCCGGGTCGCTACCCGGATTTGACGGTGGCTGGAGCGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 90 bp | AAAGCCAGCGGTGTAATTCAGTCCGCATCTGCCTTGCGTCGCCCGTaGCGCTCCAGCCACCGTCAAATCCGGGTAGCGACCCGGGGCGTT | + |
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Preference number: 5 (lower is better) Translates to: KASGVIQSASALRRP*RSSHRQIRVATRGV Trigger: AACGCCCCGGGTCGCTACCCGGATTTGACGGTGGCTGGAGCGGCACGGGCGACGCAAGGCAGATGCGGACTGAATTACACCGCTGGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CCA 90 bp | TTTGCAGCGGTGCCGAGGAAGAGGACGGGAACGGTGTTACGGTATTaGTGGGCCCCTAACAGGCCTGCGGCGAACGCTTTCCCGGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: FAAVPRKRTGTVLRY*WAPNRPAANAFPER Trigger: GCGCTCCGGGAAAGCGTTCGCCGCAGGCCTGTTAGGGGCCCACCAATACCGTAACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 90 bp | AAGCTGGAGAACAAGGAAAGCCAGCGGTGTAATTCAGTCCGCATCTaGCTTGCGTCGCCCGTGCCGCTCCAGCCACCGTCAAATCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: KLENKESQRCNSVRI*LASPVPLQPPSNPG Trigger: ACCCGGATTTGACGGTGGCTGGAGCGGCACGGGCGACGCAAGGCAGATGCGGACTGAATTACACCGCTGGCTTTCCTTGTTCTCCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 90 bp | AAGAACTTTAAGATGAGGACCATGGGATTTCCTGAGCTTCCCAGCTaGAAGACCCTCGGGCCACCCAGCTCTGCCGCTGACCTCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: KNFKMRTMGFPELPS*KTLGPPSSAADLHL Trigger: GAGATGGAGGTCAGCGGCAGAGCTGGGTGGCCCGAGGGTCTTGCAGCTGGGAAGCTCAGGAAATCCCATGGTCCTCATCTTAAAGTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460469.1 |
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| CDS GCA 90 bp | TTAAGTTACAATTATGGAGGCCCAGAAGTCCCACAGTATGCTGCCTaGAAGCTGGAGAACAAGGAAAGCCAGCGGTGTAATTCAGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: LSYNYGGPEVPQYAA*KLENKESQRCNSVR Trigger: GCGGACTGAATTACACCGCTGGCTTTCCTTGTTCTCCAGCTTGCAGGCAGCATACTGTGGGACTTCTGGGCCTCCATAATTGTAACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS-3UTR CAA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGGAACGAAATCGAGACTaGTTTCGGAATACCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: NLTFEELGQAIPTRPPPKERNRD*FRNTLA Trigger: AGCCAAGGTATTCCGAAACAAGTCTCGATTTCGTTC...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CAA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGTTGTTTCGGAATACCTaGGCTGATGTCCACTTTACT | + |
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Preference number: 5 (lower is better) Translates to: NLTFEELGQAIPTRPPPKLFRNT*ADVHFT Trigger: AGTAAAGTGGACATCAGCCAAGGTATTCCGAAACAA...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CAA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGACCACCAATGAGAACTaGCTTTGGTCAATCTTACCT | + |
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Preference number: 5 (lower is better) Translates to: NLTFEELGQAIPTRPPPKTTNEN*LWSILP Trigger: AGGTAAGATTGACCAAAGCAAGTTCTCATTGGTGGT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CAA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGTTTATGCAAAGTCTTTaGCCTCACTTGAATCACAGC | + |
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Preference number: 5 (lower is better) Translates to: NLTFEELGQAIPTRPPPKFMQSL*PHLNHS Trigger: GCTGTGATTCAAGTGAGGCAAAAGACTTTGCATAAA...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CAA 90 bp | AATCTTACCTTTGAAGAACTAGGACAAGCCATTCCTACCAGGCCACCACCAAAGAGTCTTTGTGATGCTTaGTATCTACAGGGAACTGTA | + |
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Preference number: 5 (lower is better) Translates to: NLTFEELGQAIPTRPPPKSLCDA*YLQGTV Trigger: TACAGTTCCCTGTAGATACAAAGCATCACAAAGACT...CTTTGGTGGTGGCCTGGTAGGAATGGCTTGTCCTAGTTCTTCAAAGGTAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351193.7 |
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| CDS-3UTR CAA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTGAACGAAATCGAGACTaGTTTCGGAATACCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: NLGKWYPGILATFCKSEIERNRD*FRNTLA Trigger: AGCCAAGGTATTCCGAAACAAGTCTCGATTTCGTTC...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR CAA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTTTGTTTCGGAATACCTaGGCTGATGTCCACTTTACT | + |
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Preference number: 5 (lower is better) Translates to: NLGKWYPGILATFCKSEILFRNT*ADVHFT Trigger: AGTAAAGTGGACATCAGCCAAGGTATTCCGAAACAA...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS-3UTR CAA 90 bp | AATCTAGGTAAATGGTATCCGGGAATACTTGCGACATTTTGTAAGTCTGAAATTAGTCTTTGTGATGCTTaGTATCTACAGGGAACTGTA | + |
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Preference number: 5 (lower is better) Translates to: NLGKWYPGILATFCKSEISLCDA*YLQGTV Trigger: TACAGTTCCCTGTAGATACAAAGCATCACAAAGACT...AATTTCAGACTTACAAAATGTCGCAAGTATTCCCGGATACCATTTACCTAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472947.5 |
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| CDS TCA 90 bp | TCACTTTACCTAGTCTCCTCTTTTTACGTCTTCCTCCAGTCTCTCTaGATAATTAATATATTCACAGAACTTCGAAAAAGCAGGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLYLVSSFYVFLQSL*IINIFTELRKSRKE Trigger: TTCTTTCCTGCTTTTTCGAAGTTCTGTGAATATATTAATTATTCAGAGAGACTGGAGGAAGACGTAAAAAGAGGAGACTAGGTAAAGTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000460469.1 |
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| CDS CAA 90 bp | CCTGGGCTCCAACCCTGGACGACCAAGGGCGAGGTCAGCTCGGGATaGTGGACGCCCGGGCCCTCCCGCTCTCCACCAGCCCAGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: PGLQPWTTKGEVSSG*WTPGPSRSPPAQGP Trigger: CGGTCCCTGGGCTGGTGGAGAGCGGGAGGGCCCGGGCGTCCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460469.1 ENST00000476237.5 |
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| CDS CCA 72 bp | CCCTGGACGACCAAGGGCGAGGTCAGCTCGGGATTGTaGACGCCCGGGCCCTCCCGCTCTCCACCAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PWTTKGEVSSGL*TPGPSRSPPAQ Trigger: CTGGGCTGGTGGAGAGCGGGAGGGCCCGGGCGTCCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000460469.1 ENST00000463518.5 ENST00000476237.5 |
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| CDS CAA 90 bp | TCTGGGCTCCAACCCTGGACGACCAAGGGCGAGGTCAGCTCGGGATaGTGGACGCCCGGGCCCTCCCGCTCTCCACCAGCCCAGGGACCG | + |
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Preference number: 6 (lower is better) Translates to: SGLQPWTTKGEVSSG*WTPGPSRSPPAQGP Trigger: CGGTCCCTGGGCTGGTGGAGAGCGGGAGGGCCCGGGCGTCCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463518.5 |
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| CDS CAA 72 bp | CAACCCTGGACGACCAAGGGCGAGGTCAGCTCGGGATaGTGGACGCCCGGGCCCTCCCGCTCTCCACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QPWTTKGEVSSG*WTPGPSRSPPA Trigger: GGCTGGTGGAGAGCGGGAGGGCCCGGGCGTCCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000460469.1 ENST00000463518.5 ENST00000476237.5 |
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| CDS CAA 72 bp | CAGCCACCGTCAAATCCGGGTAGCGACCCGGGGCGTTaGCAGCGGTGCCGAGGAAGAGGACGGGAACGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QPPSNPGSDPGR*QRCRGRGRERC Trigger: ACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAACGCCCCGGGTCGCTACCCGGATTTGACGGTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 72 bp | AGCCACCGTCAAATCCGGGTAGCGACCCGGGGCGTTTaGAGCGGTGCCGAGGAAGAGGACGGGAACGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SHRQIRVATRGV*SGAEEEDGNGV Trigger: AACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAACGCCCCGGGTCGCTACCCGGATTTGACGGTGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CCA 72 bp | CTGCCGCTGACCTCCATCTCACCTGGGCTCCAACCCTaGACGACCAAGGGCGAGGTCAGCTCGGGATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LPLTSISPGLQP*TTKGEVSSGLW Trigger: CCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGGTGAGATGGAGGTCAGCGGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460469.1 |
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| CDS CAA 90 bp | GTGCCGCTCCAGCCACCGTCAAATCCGGGTAGCGACCCGGGGCGTTaGCAGCGGTGCCGAGGAAGAGGACGGGAACGGTGTTACGGTATT | + |
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Preference number: 6 (lower is better) Translates to: VPLQPPSNPGSDPGR*QRCRGRGRERCYGI Trigger: AATACCGTAACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAACGCCCCGGGTCGCTACCCGGATTTGACGGTGGCTGGAGCGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 72 bp | GGTGTAATTCAGTCCGCATCTGCCTTGCGTCGCCCGTaGCGCTCCAGCCACCGTCAAATCCGGGTAGCGACC | + |
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Preference number: 6 (lower is better) Translates to: GVIQSASALRRP*RSSHRQIRVAT Trigger: GGTCGCTACCCGGATTTGACGGTGGCTGGAGCGGCACGGGCGACGCAAGGCAGATGCGGACTGAATTACACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CCA 72 bp | CCGAGGAAGAGGACGGGAACGGTGTTACGGTATTGGTaGGCCCCTAACAGGCCTGCGGCGAACGCTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PRKRTGTVLRYW*APNRPAANAFP Trigger: CGGGAAAGCGTTCGCCGCAGGCCTGTTAGGGGCCCACCAATACCGTAACACCGTTCCCGTCCTCTTCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CCA 72 bp | GTGCCGAGGAAGAGGACGGGAACGGTGTTACGGTATTaGTGGGCCCCTAACAGGCCTGCGGCGAACGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VPRKRTGTVLRY*WAPNRPAANAF Trigger: GAAAGCGTTCGCCGCAGGCCTGTTAGGGGCCCACCAATACCGTAACACCGTTCCCGTCCTCTTCCTCGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CAA 90 bp | TGGAGAACAAGGAAAGCCAGCGGTGTAATTCAGTCCGCATCTGCCTaGCGTCGCCCGTGCCGCTCCAGCCACCGTCAAATCCGGGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: WRTRKASGVIQSASA*RRPCRSSHRQIRVA Trigger: CGCTACCCGGATTTGACGGTGGCTGGAGCGGCACGGGCGACGCAAGGCAGATGCGGACTGAATTACACCGCTGGCTTTCCTTGTTCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 72 bp | AAGATGAGGACCATGGGATTTCCTGAGCTTCCCAGCTaGAAGACCCTCGGGCCACCCAGCTCTGCCGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: KMRTMGFPELPS*KTLGPPSSAAD Trigger: GTCAGCGGCAGAGCTGGGTGGCCCGAGGGTCTTGCAGCTGGGAAGCTCAGGAAATCCCATGGTCCTCATCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000460469.1 |
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| CDS GCA 72 bp | TCAAATCCGGGTAGCGACCCGGGGCGTTTGCAGCGGTaGCGAGGAAGAGGACGGGAACGGTGTTACGGTATT | + |
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Preference number: 6 (lower is better) Translates to: SNPGSDPGRLQR*RGRGRERCYGI Trigger: AATACCGTAACACCGTTCCCGTCCTCTTCCTCGGCACCGCTGCAAACGCCCCGGGTCGCTACCCGGATTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 72 bp | AACAAGGAAAGCCAGCGGTGTAATTCAGTCCGCATCTaGCTTGCGTCGCCCGTGCCGCTCCAGCCACCGTCA | + |
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Preference number: 6 (lower is better) Translates to: NKESQRCNSVRI*LASPVPLQPPS Trigger: TGACGGTGGCTGGAGCGGCACGGGCGACGCAAGGCAGATGCGGACTGAATTACACCGCTGGCTTTCCTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CAA 72 bp | AGGAAAGCCAGCGGTGTAATTCAGTCCGCATCTGCCTaGCGTCGCCCGTGCCGCTCCAGCCACCGTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: RKASGVIQSASA*RRPCRSSHRQI Trigger: GATTTGACGGTGGCTGGAGCGGCACGGGCGACGCAAGGCAGATGCGGACTGAATTACACCGCTGGCTTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS CCA 72 bp | TGCCTTAAGTTCTCCATCTCACCTGGGCTCCAACCCTaGACGACCAAGGGCGAGGTCAGCTCGGGATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: CLKFSISPGLQP*TTKGEVSSGLW Trigger: CCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGGTGAGATGGAGAACTTAAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476237.5 |
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| CDS CCA 72 bp | ATCGTTCTGTATGCCTTAAGTTCTGGGCTCCAACCCTaGACGACCAAGGGCGAGGTCAGCTCGGGATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: IVLYALSSGLQP*TTKGEVSSGLW Trigger: CCACAATCCCGAGCTGACCTCGCCCTTGGTCGTCCAGGGTTGGAGCCCAGAACTTAAGGCATACAGAACGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463518.5 |
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| CDS GCA 72 bp | TTACAATTATGGAGGCCCAGAAGTCCCACAGTATGCTaGCTGCAAGCTGGAGAACAAGGAAAGCCAGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LQLWRPRSPTVC*LQAGEQGKPAV Trigger: CACCGCTGGCTTTCCTTGTTCTCCAGCTTGCAGGCAGCATACTGTGGGACTTCTGGGCCTCCATAATTGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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| CDS GCA 72 bp | AAGTTACAATTATGGAGGCCCAGAAGTCCCACAGTATaGTGCCTGCAAGCTGGAGAACAAGGAAAGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: KLQLWRPRSPTV*CLQAGEQGKPA Trigger: CGCTGGCTTTCCTTGTTCTCCAGCTTGCAGGCAGCATACTGTGGGACTTCTGGGCCTCCATAATTGTAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468606.5 |
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